View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18198_low_25 (Length: 235)
Name: NF18198_low_25
Description: NF18198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18198_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 7235493 - 7235711
Alignment:
| Q |
1 |
tttcattgcagcacatacagatcaatgttttactgatgctgattgtaaacccactctatgcttgtttcctataatcaaaaggtgcattgaaaatcaatgt |
100 |
Q |
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| T |
7235493 |
tttcattgcagcatatacagatgaatgttctactgatgctgattgtgaatacattctatgcttgtttcctataatcaaaaggtgcattcacaatcattgt |
7235592 |
T |
|
| Q |
101 |
aaatgtgtgccaacgggtttcgctgaacctatgagtatcatacccaacgtagtacacaaatttcatattataaattattagttgttggagtaacaaaaga |
200 |
Q |
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||||||||||||| ||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
7235593 |
aaatgtgtgccaatgggttccattgaacctatgagtaccatacccaacggagtacacaaatttcatattataaataattagttgttggagtaacaaaaga |
7235692 |
T |
|
| Q |
201 |
tatacaccatatacctttt |
219 |
Q |
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||||||| ||||||||||| |
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| T |
7235693 |
tatacacaatatacctttt |
7235711 |
T |
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