View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18198_low_26 (Length: 234)
Name: NF18198_low_26
Description: NF18198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18198_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 5409145 - 5409375
Alignment:
| Q |
1 |
tacttaaatgaattcatttttcaaatttttgtccgtgtcgaggtgtccggtgtcattgtgcatgcttcatagtttggaaatgattttatatttgtagtaa |
100 |
Q |
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| T |
5409145 |
tacttaaatgaattcatttttcaaatttttgtccgtgtcgaggtgtccggtgtcattgtgcatgcttcatagtttggaaatgattttatatttgtagtaa |
5409244 |
T |
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| Q |
101 |
cttcttttggtgtttattttggttttttgtgtgaatagtggagcaagcggaaggagtacttgttgcgattgtgcagcggtctatagaatttgctttgtgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5409245 |
cttcttttggtgtttattttggttttttgtgtgaatagtggagcaagcggaaggagtacttgttgcgattgtgcagcggtctatagaatttgctttgtgt |
5409344 |
T |
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| Q |
201 |
tatttggagaaatctggatttgatgatgatg |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
5409345 |
tatttggagaaatctggatttgatgatgatg |
5409375 |
T |
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