View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18199_high_6 (Length: 413)

Name: NF18199_high_6
Description: NF18199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18199_high_6
NF18199_high_6
[»] chr4 (23 HSPs)
chr4 (1-394)||(1524139-1524535)
chr4 (5-115)||(12116510-12116620)
chr4 (1-182)||(546963-547144)
chr4 (6-139)||(1600474-1600607)
chr4 (6-107)||(570406-570507)
chr4 (69-182)||(8186959-8187072)
chr4 (78-185)||(553606-553713)
chr4 (76-183)||(3438433-3438540)
chr4 (6-130)||(53761692-53761816)
chr4 (255-293)||(1755646-1755684)
chr4 (78-183)||(1489228-1489333)
chr4 (78-139)||(1537678-1537739)
chr4 (82-198)||(644961-645077)
chr4 (67-139)||(55908639-55908711)
chr4 (97-139)||(1495833-1495875)
chr4 (97-139)||(1533901-1533943)
chr4 (6-56)||(1537761-1537811)
chr4 (76-182)||(8183898-8184004)
chr4 (101-183)||(12121324-12121406)
chr4 (147-183)||(570541-570577)
chr4 (147-183)||(570727-570763)
chr4 (75-131)||(641039-641095)
chr4 (5-49)||(1519143-1519187)
[»] chr6 (14 HSPs)
chr6 (6-131)||(6432216-6432341)
chr6 (6-116)||(6426566-6426676)
chr6 (6-131)||(6394919-6395044)
chr6 (5-58)||(12102320-12102373)
chr6 (5-51)||(9410756-9410802)
chr6 (78-131)||(6402987-6403040)
chr6 (68-208)||(28935175-28935315)
chr6 (265-299)||(6437014-6437048)
chr6 (82-140)||(11936185-11936243)
chr6 (82-140)||(11948165-11948223)
chr6 (6-131)||(7119212-7119337)
chr6 (6-131)||(7131690-7131815)
chr6 (13-53)||(6410068-6410108)
chr6 (79-131)||(6585156-6585208)
[»] chr8 (6 HSPs)
chr8 (6-102)||(21235613-21235709)
chr8 (5-183)||(17636264-17636446)
chr8 (6-48)||(27922563-27922605)
chr8 (5-51)||(18315272-18315318)
chr8 (82-140)||(28246205-28246263)
chr8 (178-259)||(17635684-17635765)
[»] chr3 (4 HSPs)
chr3 (16-131)||(51113700-51113815)
chr3 (6-130)||(13470652-13470776)
chr3 (7-58)||(51120885-51120936)
chr3 (82-207)||(1657378-1657503)
[»] chr5 (3 HSPs)
chr5 (67-183)||(41901405-41901521)
chr5 (5-178)||(32267529-32267699)
chr5 (262-302)||(32268635-32268675)
[»] chr7 (4 HSPs)
chr7 (6-131)||(10614648-10614773)
chr7 (6-58)||(15092143-15092195)
chr7 (75-137)||(7977702-7977764)
chr7 (262-302)||(7977973-7978013)
[»] chr1 (3 HSPs)
chr1 (310-356)||(9581841-9581887)
chr1 (322-359)||(29690667-29690704)
chr1 (322-359)||(29718179-29718216)
[»] chr2 (2 HSPs)
chr2 (75-139)||(1037575-1037639)
chr2 (79-116)||(43277394-43277431)
[»] scaffold0014 (1 HSPs)
scaffold0014 (78-133)||(88943-88998)
[»] scaffold0295 (1 HSPs)
scaffold0295 (67-139)||(535-607)


Alignment Details
Target: chr4 (Bit Score: 363; Significance: 0; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 1 - 394
Target Start/End: Complemental strand, 1524535 - 1524139
Alignment:
Q  1 gtacgtgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1524535 gtacgtgacaaattcaacacctccaaattgggaacttcaaagttcattccatgaagttctattttagaacagttggctaagttcaaatgcctaagtttac 1524436  T
Q  101 aacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagctgcaaattggggaaacagtcggcgatgaggca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1524435 aacatctccttaaaacctgaagaataccttcttcagatacgtatgagcaataacttaaatcaagcagctgcaaattggggaaacagtcggcgatgaggca 1524336  T
Q  201 catgtcaccgctacggagagaatcaactctggaacacgtgagagaagtcaaagttgtaaggttcaatgggaaacgagagatttggcagagaagcttgttg 300  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1524335 catgtcaccgctacggagagaatcaactctggaacaagtaagagaagtcaaagttgtaaggttcaatggaaaacgagagatttggcagagaagcttgttg 1524236  T
Q  301 agatcacga---taccacgtgagatcgagggaagtgaggttggtgaacctttggaagagacggcggaggaaagggcgtgatccattatagatagtaa 394  Q
    |||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1524235 agatcacgatcgtaccacgtgagatcgagggaagtgaggttggtgaacctttggaagagacggcggaggaaagggcgtgatccattatagatagtaa 1524139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 12116620 - 12116510
Alignment:
Q  5 gtgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaaca 104  Q
    ||||||| ||||||||||| ||||| ||||| ||||||||||||| | |||||| |||||| ||||||| |||||||||  ||||||| |||||||||||    
T  12116620 gtgacaagttcaacacctctaaatttggaacatcaaagttcattctacgcagttttatttttgaacagtaggctaagttttaatgccttagtttacaaca 12116521  T
Q  105 tctccttaaaa 115  Q
    |||||||||||    
T  12116520 tctccttaaaa 12116510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 546963 - 547144
Alignment:
Q  1 gtacgtgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcag-ttctattttagaacagttggctaagttcaaatgcctaagttta 99  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||||||   || |||  |  || |||| |||| ||||||||||||||| |  |||    
T  546963 gtacgtgacaagttcaccacctccaatttaggaacttcaaagttcattccaaataggttcactacta-aacaattggataagttcaaatgccttatctta 547061  T
Q  100 caacatctccttaaaacctgaagaataccttcttcagatacgt-acgagcaataacttaaatcaagcagctgcaaattggggaa 182  Q
    ||||||||||||||||| | |  |||||  |||||||||| || |||| |||||||||||||||||||| ||||||||||||||    
T  547062 caacatctccttaaaacatcacaaatactgtcttcagatatgttacga-caataacttaaatcaagcagttgcaaattggggaa 547144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 1600474 - 1600607
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaacat 105  Q
    |||||| |||||||||||||  ||  |||||||||||||||||||  |||| |  ||| | ||||| | ||||||||||||||| |||| |||| || ||    
T  1600474 tgacaagttcaacacctccagtttaagaacttcaaagttcattcctcgcagcttcattattgaacactgggctaagttcaaatgtctaattttagaaaat 1600573  T
Q  106 ctccttaaaacctgaagaataccttcttcagata 139  Q
    ||||||||||| |||  |||||||||||||||||    
T  1600574 ctccttaaaacttgacaaataccttcttcagata 1600607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 570406 - 570507
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaacat 105  Q
    |||||| ||||||||||| |  ||| ||||||||||||||| |||| ||||||  | ||| || ||||  ||||||||||||||||||||||||||||||    
T  570406 tgacaagttcaacacctcgagtttgagaacttcaaagttcaatccacgcagtttcacttttgagcagtgagctaagttcaaatgcctaagtttacaacat 570505  T
Q  106 ct 107  Q
    ||    
T  570506 ct 570507  T

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Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 8187072 - 8186959
Alignment:
Q  69 acagttggctaagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagc 168  Q
    ||||| |||||||||||||| |||||  | |||||||||| | ||||| |||  ||||||||||||||||| ||   |||||| ||| |||||||||| |    
T  8187072 acagtaggctaagttcaaatccctaatctcacaacatctcttcaaaacttgacaaataccttcttcagatatgtcatagcaatgactcaaatcaagcaac 8186973  T
Q  169 tgcaaattggggaa 182  Q
    ||||||||||||||    
T  8186972 tgcaaattggggaa 8186959  T

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Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 553606 - 553713
Alignment:
Q  78 taagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagctgcaaattg 177  Q
    |||||||||||| ||||  ||||||||| |||||||||| |||| || | ||||||||||||| |   || |||| || |||||||||| ||||||||||    
T  553606 taagttcaaatgtctaatgttacaacatgtccttaaaacatgaacaacagcttcttcagatacatcgtaggaatatctcaaatcaagcatctgcaaattg 553705  T
Q  178 gggaaaca 185  Q
    ||||||||    
T  553706 gggaaaca 553713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 3438540 - 3438433
Alignment:
Q  76 gctaagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagctgcaaat 175  Q
    |||||||||||||| ||||  |||||||||||||||||||| |||| || |||||| ||||||| |||   ||| |  || | |||||||||||||||||    
T  3438540 gctaagttcaaatgtctaatcttacaacatctccttaaaacttgaataacaccttcgtcagatatgtagtcgcattctctcacatcaagcagctgcaaat 3438441  T
Q  176 tggggaaa 183  Q
    ||||||||    
T  3438440 tggggaaa 3438433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 53761816 - 53761692
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaacat 105  Q
    |||||| |||||| |||| |  ||||||||| ||||||||||||||   || |  | | | ||||| | ||||||||||||||||||||  |||||||||    
T  53761816 tgacaagttcaacgcctctagcttgggaactacaaagttcattccaattagcttcactcttgaacactcggctaagttcaaatgcctaatgttacaacat 53761717  T
Q  106 ctccttaaaacctgaagaatacctt 130  Q
    ||||||||||| |||  ||||||||    
T  53761716 ctccttaaaacttgacaaatacctt 53761692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 1755646 - 1755684
Alignment:
Q  255 tgtaaggttcaatgggaaacgagagatttggcagagaag 293  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  1755646 tgtaagtttcaatgggaaacgagagatttggcagagaag 1755684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 1489333 - 1489228
Alignment:
Q  78 taagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagctgcaaattg 177  Q
    |||||||||||||||||  | | ||||| || ||||||| || | ||||||||||||||||| ||   |||||||| | |||| |||||  |||||||||    
T  1489333 taagttcaaatgcctaatatcagaacatgtctttaaaacatggaaaataccttcttcagatatgttatagcaataagtcaaattaagcaattgcaaattg 1489234  T
Q  178 gggaaa 183  Q
    ||||||    
T  1489233 gggaaa 1489228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 1537739 - 1537678
Alignment:
Q  78 taagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagata 139  Q
    |||||||||||||||||| |   ||||| |||||||||| |||| |||||||||||||||||    
T  1537739 taagttcaaatgcctaagctcggaacatgtccttaaaacttgaaaaataccttcttcagata 1537678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 644961 - 645077
Alignment:
Q  82 ttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagctgcaaattgggga 181  Q
    |||||||| ||||  ||||||||| || ||||||| ||||  |||||||||||||||||||    |||||  || |||||||| ||||| ||||| ||||    
T  644961 ttcaaatgtctaatgttacaacatatcattaaaacatgaaccataccttcttcagatacgtctttgcaatggctcaaatcaagaagctgtaaatttggga 645060  T
Q  182 aacagtcggcgatgagg 198  Q
    |||| || || ||||||    
T  645061 aacaatcagcaatgagg 645077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 55908711 - 55908639
Alignment:
Q  67 gaacagttggctaagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagata 139  Q
    ||||||| |||||| |||||||| ||||  |||||||||||||||| ||| | |  |||||||||||||||||    
T  55908711 gaacagtaggctaaattcaaatgtctaaccttacaacatctccttagaacttcacaaataccttcttcagata 55908639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 1495875 - 1495833
Alignment:
Q  97 ttacaacatctccttaaaacctgaagaataccttcttcagata 139  Q
    |||||||||||||||||||| |||  |||||||||||||||||    
T  1495875 ttacaacatctccttaaaacatgaccaataccttcttcagata 1495833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 1533943 - 1533901
Alignment:
Q  97 ttacaacatctccttaaaacctgaagaataccttcttcagata 139  Q
    |||||||||||||||||||| |||  |||||||||||||||||    
T  1533943 ttacaacatctccttaaaacatgactaataccttcttcagata 1533901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 1537811 - 1537761
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcag 56  Q
    |||||| |||||||| || |  |||||||||||||||||||||||||||||    
T  1537811 tgacaagttcaacacttctagtttgggaacttcaaagttcattccatgcag 1537761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 182
Target Start/End: Complemental strand, 8184004 - 8183898
Alignment:
Q  76 gctaagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagctgcaaat 175  Q
    |||||||||||||  ||||  | |||||| ||||||||||  |||  |||||||| |||||| | ||   |||||| ||| ||||||||| |||||||||    
T  8184004 gctaagttcaaatctctaatctcacaacaactccttaaaatttgagtaatacctttttcagaaatgtcaaagcaatgactcaaatcaagccgctgcaaat 8183905  T
Q  176 tggggaa 182  Q
    |||||||    
T  8183904 tggggaa 8183898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 12121406 - 12121324
Alignment:
Q  101 aacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagctgcaaattggggaaa 183  Q
    ||||| ||||||| || || | ||||||||||||||||| ||   ||||| |||| ||||||||||  |||||||||||||||    
T  12121406 aacatgtccttaagacttggaaaataccttcttcagatatgttatagcaaaaactcaaatcaagcaattgcaaattggggaaa 12121324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 570541 - 570577
Alignment:
Q  147 gcaataacttaaatcaagcagctgcaaattggggaaa 183  Q
    |||||||||||||||||| | ||||||||||||||||    
T  570541 gcaataacttaaatcaagtatctgcaaattggggaaa 570577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 570727 - 570763
Alignment:
Q  147 gcaataacttaaatcaagcagctgcaaattggggaaa 183  Q
    |||||||||||||||||| || |||||||||||||||    
T  570727 gcaataacttaaatcaagtagttgcaaattggggaaa 570763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 641039 - 641095
Alignment:
Q  75 ggctaagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttc 131  Q
    ||||||||||||||| ||||  ||||||||| |||||||||| |||| ||| |||||    
T  641039 ggctaagttcaaatgtctaacattacaacatatccttaaaacttgaaaaattccttc 641095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 1519187 - 1519143
Alignment:
Q  5 gtgacaaattcaacacctccaaattgggaacttcaaagttcattc 49  Q
    ||||||| ||||||||||| |  ||||||||||||||||||||||    
T  1519187 gtgacaagttcaacacctctagtttgggaacttcaaagttcattc 1519143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 6432216 - 6432341
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcag-ttctattttagaacagttggctaagttcaaatgcctaagtttacaaca 104  Q
    |||||| |||||||||| ||  |||||||||||||||||||||||||| || |||  ||||| | || | |||||||||||||||  |||||||||||||    
T  6432216 tgacaagttcaacaccttcagcttgggaacttcaaagttcattccatgtagcttcacttttata-caataggctaagttcaaatgtttaagtttacaaca 6432314  T
Q  105 tctccttaaaacctgaagaataccttc 131  Q
    |||||||||||| |||  |||||||||    
T  6432315 tctccttaaaacttgacaaataccttc 6432341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 6426566 - 6426676
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaacat 105  Q
    ||||||||||||||||||||  | ||||||| |||||||||||||||| ||||  |  || ||||||   ||||||||||||||  |||| |||||||||    
T  6426566 tgacaaattcaacacctccagctcgggaactgcaaagttcattccatgtagtttcacgtttgaacagaaagctaagttcaaatgtttaagcttacaacat 6426665  T
Q  106 ctccttaaaac 116  Q
     ||||||||||    
T  6426666 ttccttaaaac 6426676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 6394919 - 6395044
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaacat 105  Q
    |||||| |||||||||||||  | ||||||| |||||||||||||||| ||||  | ||| ||||||   ||||||||||||||  |||| |||||||||    
T  6394919 tgacaagttcaacacctccagctcgggaactgcaaagttcattccatgtagtttcacttttgaacagaaagctaagttcaaatgtttaagcttacaacat 6395018  T
Q  106 ctccttaaaacctgaagaataccttc 131  Q
     || ||||||| |||  |||||||||    
T  6395019 ttctttaaaacttgacaaataccttc 6395044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 12102320 - 12102373
Alignment:
Q  5 gtgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagtt 58  Q
    ||||||| |||||||||||||  ||||||||||||||||||| |||||||||||    
T  12102320 gtgacaagttcaacacctccagtttgggaacttcaaagttcaatccatgcagtt 12102373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 9410756 - 9410802
Alignment:
Q  5 gtgacaaattcaacacctccaaattgggaacttcaaagttcattcca 51  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||    
T  9410756 gtgacaaattcaacacctccaacttgggagcttcaaagttcaatcca 9410802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 6402987 - 6403040
Alignment:
Q  78 taagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttc 131  Q
    |||||||||||||||||  |||||||||||||||||||| |||  |||||||||    
T  6402987 taagttcaaatgcctaatgttacaacatctccttaaaacttgacaaataccttc 6403040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 208
Target Start/End: Original strand, 28935175 - 28935315
Alignment:
Q  68 aacagttggctaagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcag 167  Q
    |||||| ||||||||||||||| ||||  |||  |||| || | ||||| | || ||||||||||||| ||||||     ||||   | |||||||||      
T  28935175 aacagtaggctaagttcaaatgtctaatgttaagacatttcatcaaaacataaacaataccttcttcacatacgtcatcacaatggttcaaatcaagcga 28935274  T
Q  168 ctgcaaattggggaaacagtcggcgatgaggcacatgtcac 208  Q
    ||||||||| |||||||| |||||||||||||||| |||||    
T  28935275 ctgcaaattagggaaacaatcggcgatgaggcacaggtcac 28935315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 6437014 - 6437048
Alignment:
Q  265 aatgggaaacgagagatttggcagagaagcttgtt 299  Q
    ||||||||||||||||||| |||||||||||||||    
T  6437014 aatgggaaacgagagatttcgcagagaagcttgtt 6437048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 11936243 - 11936185
Alignment:
Q  82 ttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatac 140  Q
    |||||||| ||||  ||||||||| || ||||||| |||| ||||||||||||||||||    
T  11936243 ttcaaatgtctaatgttacaacatatcattaaaacatgaacaataccttcttcagatac 11936185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 11948223 - 11948165
Alignment:
Q  82 ttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatac 140  Q
    |||||||| ||||  ||||||||| || ||||||| |||| ||||||||||||||||||    
T  11948223 ttcaaatgtctaatgttacaacatatcattaaaacatgaacaataccttcttcagatac 11948165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 7119212 - 7119337
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaacat 105  Q
    |||||| |||||||||||||  | | ||||  |||||||||||||| | || |  | | | ||||||| |||||||||||||||  |||  ||| |||||    
T  7119212 tgacaagttcaacacctccagctggtgaacaacaaagttcattccaagtagcttcactcttgaacagtgggctaagttcaaatgtttaatcttagaacat 7119311  T
Q  106 ctccttaaaacctgaagaataccttc 131  Q
    ||||||||||| |||  |||||||||    
T  7119312 ctccttaaaacttgacaaataccttc 7119337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 7131690 - 7131815
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaacat 105  Q
    |||||| |||||||||||||  | | ||||  |||||||||||||| | || |  | | | ||||||| |||||||||||||||  |||  ||| |||||    
T  7131690 tgacaagttcaacacctccagctggcgaacaacaaagttcattccaagtagcttcactcttgaacagtgggctaagttcaaatgtttaatcttagaacat 7131789  T
Q  106 ctccttaaaacctgaagaataccttc 131  Q
    ||||||||||| |||  |||||||||    
T  7131790 ctccttaaaacttgacaaataccttc 7131815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 6410068 - 6410108
Alignment:
Q  13 ttcaacacctccaaattgggaacttcaaagttcattccatg 53  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  6410068 ttcaacaccttcagcttgggaacttcaaagttcattccatg 6410108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 6585208 - 6585156
Alignment:
Q  79 aagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttc 131  Q
    ||||||||||||||||  ||| |||||||||||||||| |||  |||||||||    
T  6585208 aagttcaaatgcctaatattaaaacatctccttaaaacatgacaaataccttc 6585156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 21235613 - 21235709
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaa 102  Q
    |||||| |||||||||||||  ||||||||||||||||||| ||||  |||||  | ||| || ||||  |||||||||||||||||||||||||||    
T  21235613 tgacaagttcaacacctccagtttgggaacttcaaagttcactccacacagtttcacttttgagcagtgagctaagttcaaatgcctaagtttacaa 21235709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 17636446 - 17636264
Alignment:
Q  5 gtgacaaattcaacacctccaaattgggaacttcaaagttcat----tccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttac 100  Q
    ||||||| |||||||||||||| ||||||||||||||||||||    || ||| ||||  | | | |||||   | ||||||||||||||||||  |||     
T  17636446 gtgacaagttcaacacctccaatttgggaacttcaaagttcattcgatcgatgtagtttcactcttgaacatcggcctaagttcaaatgcctaatattag 17636347  T
Q  101 aacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagctgcaaattggggaaa 183  Q
    |||||| ||||||||| |||  ||||||||  || ||||  |    |||||  | ||||||||||||||||||||||||||||    
T  17636346 aacatccccttaaaacttgacaaatacctttctctgatattttattgcaatctcgtaaatcaagcagctgcaaattggggaaa 17636264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 27922563 - 27922605
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcatt 48  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  27922563 tgacaagttcaacacctccaatttgggaacttcaaagttcatt 27922605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 18315318 - 18315272
Alignment:
Q  5 gtgacaaattcaacacctccaaattgggaacttcaaagttcattcca 51  Q
    ||||||| |||||||||||||  |||||||||| |||||||||||||    
T  18315318 gtgacaagttcaacacctccagtttgggaactttaaagttcattcca 18315272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 28246263 - 28246205
Alignment:
Q  82 ttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatac 140  Q
    |||||||| ||||  ||||||||| || ||||||| |||| ||||||||||||||||||    
T  28246263 ttcaaatgtctaatgttacaacatatcattaaaacatgaacaataccttcttcagatac 28246205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 17635765 - 17635684
Alignment:
Q  178 gggaaacagtcggcgatgaggcacatgtcaccgctacggagagaatcaactctggaacacgtgagagaagtcaaagttgtaa 259  Q
    ||||||||  ||||||||||| ||||||||  |||||||||||  | ||  | |||||| |||||||| |||||||||||||    
T  17635765 gggaaacaaccggcgatgaggaacatgtcaaagctacggagagtgttaatgcaggaacaagtgagagaggtcaaagttgtaa 17635684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 51113815 - 51113700
Alignment:
Q  16 aacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaacatctccttaaaa 115  Q
    ||||||||||  |||||| ||||||||||||||||| | || |  | ||| |||||||  ||||| ||||||||||||| ||||||||||||| ||||||    
T  51113815 aacacctccagtttgggagcttcaaagttcattccaagtagcttcagttttgaacagtaagctaatttcaaatgcctaattttacaacatctctttaaaa 51113716  T
Q  116 cctgaagaataccttc 131  Q
    | |||  |||||||||    
T  51113715 cttgacaaataccttc 51113700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 13470776 - 13470652
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaacat 105  Q
    |||||| ||||||||||||| |||||||||  |||||||||||||| | || |  | |||   ||| | ||||||||||||||||||||  |||||||||    
T  13470776 tgacaagttcaacacctccagattgggaacaacaaagttcattccaagtagcttcacttttttacaataggctaagttcaaatgcctaatcttacaacat 13470677  T
Q  106 ctccttaaaacctgaagaatacctt 130  Q
     |||||||||| |||  ||||||||    
T  13470676 atccttaaaacttgacaaatacctt 13470652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 51120936 - 51120885
Alignment:
Q  7 gacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagtt 58  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  51120936 gacaagttcaacacctccaatttgagaacttcaaagttcattccatgcagtt 51120885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 207
Target Start/End: Original strand, 1657378 - 1657503
Alignment:
Q  82 ttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagctgcaaattgggga 181  Q
    |||||||| ||||  ||||||||| || ||||||| |||| ||||||||||||||||| ||    |||||  || |||||||| ||||| ||||| ||||    
T  1657378 ttcaaatgtctaatgttacaacatatcattaaaacatgaacaataccttcttcagatatgtctttgcaatggctcaaatcaagtagctgtaaatttggga 1657477  T
Q  182 aacagtcggcgatgaggcacatgtca 207  Q
    |||| || || |||||| ||| ||||    
T  1657478 aacaatcagcaatgaggaacaggtca 1657503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 41901521 - 41901405
Alignment:
Q  67 gaacagttggctaagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagca 166  Q
    ||||| |||| |||||||||||| ||||  ||||||||  |||||||||| |||| ||||||||||||| ||| |    | ||||  || ||||||||||    
T  41901521 gaacacttggataagttcaaatgtctaatgttacaacacatccttaaaacttgaacaataccttcttcaaatatgcgacaacaattgctcaaatcaagca 41901422  T
Q  167 gctgcaaattggggaaa 183  Q
    |||||||||||||||||    
T  41901421 gctgcaaattggggaaa 41901405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 32267529 - 32267699
Alignment:
Q  5 gtgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaaca 104  Q
    ||||||| ||||| |||||||| |||||||||||||||||||||   |  ||||  | | | ||||| | || |||||||||||| ||||  ||||||||    
T  32267529 gtgacaagttcaatacctccaatttgggaacttcaaagttcatt---tctagtttcactgttgaacactgggataagttcaaatgtctaatgttacaaca 32267625  T
Q  105 tctccttaaaacctgaagaataccttcttcagatacgtacgagcaataacttaaatcaagcagctgcaaattgg 178  Q
    | |||||||||  ||||  |||||||||||||||| |    | ||||  || ||||||||||||||||||||||    
T  32267626 tatccttaaaaattgaacgataccttcttcagatatgcgacaacaattgctcaaatcaagcagctgcaaattgg 32267699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 32268635 - 32268675
Alignment:
Q  262 ttcaatgggaaacgagagatttggcagagaagcttgttgag 302  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  32268635 ttcaatggaaaacgagagatttgacagagaagcttgttgag 32268675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 10614648 - 10614773
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagttctattttagaacagttggctaagttcaaatgcctaagtttacaacat 105  Q
    |||||| ||||||||||||| |||||||||  ||| |||||||||| | || |  | |||   ||| | ||||||||||||||||||||  |||||||||    
T  10614648 tgacaagttcaacacctccagattgggaacaacaacgttcattccaagtagcttcacttttttacaataggctaagttcaaatgcctaatcttacaacat 10614747  T
Q  106 ctccttaaaacctgaagaataccttc 131  Q
     |||||||||| |||  |||||||||    
T  10614748 atccttaaaacttgacaaataccttc 10614773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 15092195 - 15092143
Alignment:
Q  6 tgacaaattcaacacctccaaattgggaacttcaaagttcattccatgcagtt 58  Q
    ||||||||||||||||||||  | ||||||| |||||||||||||||| ||||    
T  15092195 tgacaaattcaacacctccagctcgggaactgcaaagttcattccatgtagtt 15092143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 7977702 - 7977764
Alignment:
Q  75 ggctaagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcaga 137  Q
    ||||| ||| ||||| ||||  |||||||||||||||||||| |||  |||||||||||||||    
T  7977702 ggctaggtttaaatgtctaatgttacaacatctccttaaaacttgaccaataccttcttcaga 7977764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 7977973 - 7978013
Alignment:
Q  262 ttcaatgggaaacgagagatttggcagagaagcttgttgag 302  Q
    ||||||||||||| ||| ||||||| |||||||||||||||    
T  7977973 ttcaatgggaaacaagaaatttggcggagaagcttgttgag 7978013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 9581841 - 9581887
Alignment:
Q  310 taccacgtgagatcgagggaagtgaggttggtgaacctttggaagag 356  Q
    ||||||||||| |||||||| |||||||||||||| |||||||||||    
T  9581841 taccacgtgaggtcgagggaggtgaggttggtgaatctttggaagag 9581887  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 359
Target Start/End: Complemental strand, 29690704 - 29690667
Alignment:
Q  322 tcgagggaagtgaggttggtgaacctttggaagagacg 359  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  29690704 tcgagggaagtgaggttggtgaaccttttcaagagacg 29690667  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 359
Target Start/End: Complemental strand, 29718216 - 29718179
Alignment:
Q  322 tcgagggaagtgaggttggtgaacctttggaagagacg 359  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  29718216 tcgagggaagtgaggttggtgaaccttttcaagagacg 29718179  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 1037639 - 1037575
Alignment:
Q  75 ggctaagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagata 139  Q
    |||||| |||||||| ||||  |||||||||||||||||||| | |  |||||||||||||||||    
T  1037639 ggctaaattcaaatgtctaaccttacaacatctccttaaaacttcacaaataccttcttcagata 1037575  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 43277431 - 43277394
Alignment:
Q  79 aagttcaaatgcctaagtttacaacatctccttaaaac 116  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  43277431 aagttcaaatgcgtaattttacaacatctccttaaaac 43277394  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 88943 - 88998
Alignment:
Q  78 taagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttctt 133  Q
    |||||||||||| ||||  ||||||||||||||||||| ||||  |||||||||||    
T  88943 taagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 88998  T

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Target: scaffold0295 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 607 - 535
Alignment:
Q  67 gaacagttggctaagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttcttcagata 139  Q
    ||||||| |||||| |||||||| |||   |||||||||||||||| ||| | |  |||||||||||||||||    
T  607 gaacagtaggctaaattcaaatgtctagccttacaacatctccttagaacttcacaaataccttcttcagata 535  T

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