View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18199_low_13 (Length: 263)
Name: NF18199_low_13
Description: NF18199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18199_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 10192521 - 10192284
Alignment:
| Q |
11 |
catagggcggaaaatgtatttaaaaaacaattttattttttacagaatcaaaacaaatgaatattcggaagaaataaaaatttaaaattaacttcttctt |
110 |
Q |
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| T |
10192521 |
catagggcggaaaatgtatttaaaaaacaattttattttttacagaatcaaaacaaatgaatattcggaagaaataaaaatttaaaattaacttcttctt |
10192422 |
T |
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| Q |
111 |
cttttataaaagtaacacttataatggaaatgaaagagtannnnnnnattaaaattattctcaactgaaattctaatgattttattgctctaaatttaaa |
210 |
Q |
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| T |
10192421 |
cttttataaaagtaacacttataatggaaatgaaagagtatttttttattaaaattattctcaactgaaattctaatgattttattgctctaaatttaaa |
10192322 |
T |
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| Q |
211 |
ggtttgatcaacaatgcttattgtagttccttctaaat |
248 |
Q |
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| T |
10192321 |
ggtttgatcaacaatgcttattgtagttccttctaaat |
10192284 |
T |
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