View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18200_high_37 (Length: 215)
Name: NF18200_high_37
Description: NF18200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18200_high_37 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 7414024 - 7414206
Alignment:
| Q |
18 |
agtacttcttggccagatgttggtggcacttatgatagtttctgtcagagaccatgggaaaagcatggaatttgcacaccattcagccagtatgattact |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7414024 |
agtacttcttggccagatgttggtggcacttgtgatagtttctgtcagagaccatgggaaaagcatggaatttgcacaccattcagccagtatgattact |
7414123 |
T |
|
| Q |
118 |
ttcgccacaccttatatctatggtatactcacaatgtcacagttatggtggatgagaaaaatatcagacccgggacacctatg |
200 |
Q |
| |
|
|| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7414124 |
tttgtcacaccttatatctatggtatattcacaatgtcacagttatggtggatgagaaaaatatcaaacccgggacacctatg |
7414206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University