View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18200_low_7 (Length: 551)

Name: NF18200_low_7
Description: NF18200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18200_low_7
NF18200_low_7
[»] chr5 (20 HSPs)
chr5 (165-503)||(39072097-39072429)
chr5 (23-173)||(39071284-39071430)
chr5 (500-538)||(3497800-3497838)
chr5 (505-538)||(25601060-25601093)
chr5 (506-538)||(13759447-13759479)
chr5 (505-538)||(1265953-1265986)
chr5 (505-538)||(6673228-6673261)
chr5 (505-538)||(9828397-9828430)
chr5 (505-538)||(14913652-14913685)
chr5 (505-538)||(16127263-16127296)
chr5 (505-538)||(22527696-22527729)
chr5 (505-538)||(26894873-26894906)
chr5 (505-538)||(40004409-40004442)
chr5 (506-538)||(3028018-3028050)
chr5 (505-537)||(7951566-7951598)
chr5 (506-538)||(8949817-8949849)
chr5 (506-538)||(23260138-23260170)
chr5 (506-538)||(23286474-23286506)
chr5 (505-537)||(34662208-34662240)
chr5 (506-538)||(43060411-43060443)
[»] chr8 (28 HSPs)
chr8 (269-312)||(35826625-35826668)
chr8 (506-538)||(14584131-14584163)
chr8 (496-538)||(34568485-34568527)
chr8 (505-538)||(51095-51128)
chr8 (505-538)||(1774346-1774379)
chr8 (505-538)||(2944272-2944305)
chr8 (505-538)||(8251933-8251966)
chr8 (506-535)||(8797033-8797062)
chr8 (505-538)||(8951428-8951461)
chr8 (505-538)||(13153932-13153965)
chr8 (493-538)||(18455712-18455757)
chr8 (505-538)||(18754148-18754181)
chr8 (505-538)||(28192175-28192208)
chr8 (505-538)||(28572050-28572083)
chr8 (505-538)||(28579643-28579676)
chr8 (505-538)||(32675757-32675790)
chr8 (505-538)||(33745895-33745928)
chr8 (505-538)||(39029182-39029215)
chr8 (506-538)||(2152240-2152272)
chr8 (506-538)||(5162309-5162341)
chr8 (506-538)||(8566207-8566239)
chr8 (498-538)||(11798602-11798642)
chr8 (506-538)||(12802616-12802648)
chr8 (506-538)||(17069844-17069876)
chr8 (506-538)||(17578397-17578429)
chr8 (506-538)||(18641380-18641412)
chr8 (498-534)||(43653940-43653976)
chr8 (506-538)||(45260228-45260260)
[»] chr7 (24 HSPs)
chr7 (500-538)||(36711298-36711336)
chr7 (493-538)||(32814425-32814470)
chr7 (498-538)||(19920560-19920600)
chr7 (506-538)||(32643757-32643789)
chr7 (495-538)||(39871613-39871656)
chr7 (495-538)||(45778222-45778265)
chr7 (496-538)||(39197713-39197755)
chr7 (505-538)||(21295155-21295188)
chr7 (505-538)||(26255100-26255133)
chr7 (505-538)||(29286037-29286070)
chr7 (505-538)||(32872375-32872408)
chr7 (505-538)||(33858866-33858899)
chr7 (505-538)||(36698131-36698164)
chr7 (505-538)||(38858302-38858335)
chr7 (505-538)||(41026096-41026129)
chr7 (505-538)||(41252361-41252394)
chr7 (505-538)||(48521033-48521066)
chr7 (506-538)||(2290016-2290048)
chr7 (506-534)||(9036674-9036702)
chr7 (498-538)||(25247690-25247730)
chr7 (506-538)||(31458002-31458034)
chr7 (506-538)||(31769332-31769364)
chr7 (506-538)||(34012517-34012549)
chr7 (505-537)||(40300234-40300266)
[»] scaffold0604 (1 HSPs)
scaffold0604 (497-538)||(3782-3823)
[»] chr6 (19 HSPs)
chr6 (505-538)||(925933-925966)
chr6 (505-538)||(6147387-6147420)
chr6 (497-538)||(8743184-8743225)
chr6 (505-538)||(231105-231138)
chr6 (505-538)||(4844404-4844437)
chr6 (499-536)||(23398141-23398178)
chr6 (505-538)||(29036130-29036163)
chr6 (505-538)||(30248651-30248684)
chr6 (505-538)||(34301832-34301865)
chr6 (506-538)||(402621-402653)
chr6 (506-538)||(2090663-2090695)
chr6 (506-538)||(8670140-8670172)
chr6 (498-534)||(9388526-9388562)
chr6 (506-538)||(13901646-13901678)
chr6 (506-538)||(15498634-15498666)
chr6 (506-538)||(17227527-17227559)
chr6 (506-538)||(23604465-23604497)
chr6 (506-538)||(25045643-25045675)
chr6 (506-538)||(34915543-34915575)
[»] chr3 (36 HSPs)
chr3 (505-538)||(26306607-26306640)
chr3 (498-538)||(45252770-45252810)
chr3 (494-538)||(50647944-50647988)
chr3 (495-538)||(7181344-7181387)
chr3 (495-538)||(46049986-46050029)
chr3 (505-538)||(9499497-9499530)
chr3 (505-538)||(10220937-10220970)
chr3 (505-538)||(12050392-12050425)
chr3 (505-538)||(14428614-14428647)
chr3 (505-538)||(21756490-21756523)
chr3 (505-538)||(22103929-22103962)
chr3 (505-538)||(25149122-25149155)
chr3 (505-538)||(26593765-26593798)
chr3 (505-538)||(30041017-30041050)
chr3 (505-538)||(35868083-35868116)
chr3 (505-538)||(37728717-37728750)
chr3 (505-538)||(43868107-43868140)
chr3 (505-538)||(44543786-44543819)
chr3 (501-538)||(49127198-49127235)
chr3 (505-538)||(51284062-51284095)
chr3 (490-535)||(53361583-53361628)
chr3 (505-537)||(4024056-4024088)
chr3 (506-538)||(4759351-4759383)
chr3 (506-538)||(8321930-8321962)
chr3 (494-534)||(20862461-20862501)
chr3 (506-538)||(20918224-20918256)
chr3 (506-538)||(20927186-20927218)
chr3 (506-538)||(24087335-24087367)
chr3 (506-538)||(26058551-26058583)
chr3 (506-538)||(41392880-41392912)
chr3 (506-538)||(46703032-46703064)
chr3 (506-538)||(46845492-46845524)
chr3 (506-538)||(47066939-47066971)
chr3 (498-538)||(50726783-50726823)
chr3 (498-538)||(50786025-50786065)
chr3 (269-313)||(51145105-51145149)
[»] chr4 (36 HSPs)
chr4 (506-538)||(468505-468537)
chr4 (506-537)||(36130091-36130122)
chr4 (506-537)||(37518009-37518040)
chr4 (506-537)||(37522225-37522256)
chr4 (507-538)||(50451225-50451256)
chr4 (505-535)||(1028522-1028552)
chr4 (499-537)||(26626003-26626041)
chr4 (500-538)||(32032993-32033031)
chr4 (505-538)||(4035829-4035862)
chr4 (505-538)||(5375557-5375590)
chr4 (505-538)||(5743659-5743692)
chr4 (505-538)||(9328240-9328273)
chr4 (506-535)||(23777805-23777834)
chr4 (505-538)||(30771532-30771565)
chr4 (505-538)||(33413522-33413555)
chr4 (505-538)||(34273219-34273252)
chr4 (505-538)||(44294793-44294826)
chr4 (505-538)||(45742806-45742839)
chr4 (505-538)||(47806864-47806897)
chr4 (505-538)||(52977986-52978019)
chr4 (506-538)||(4415970-4416002)
chr4 (494-538)||(17610020-17610064)
chr4 (499-535)||(20391440-20391476)
chr4 (506-538)||(20455181-20455213)
chr4 (506-538)||(25124246-25124278)
chr4 (506-538)||(28501386-28501418)
chr4 (506-538)||(29520164-29520196)
chr4 (506-538)||(31937081-31937113)
chr4 (506-538)||(41620519-41620551)
chr4 (506-538)||(43387993-43388025)
chr4 (506-538)||(46949997-46950029)
chr4 (506-538)||(47228728-47228760)
chr4 (506-538)||(49373693-49373725)
chr4 (506-538)||(49793096-49793128)
chr4 (506-538)||(53564356-53564388)
chr4 (506-538)||(56432523-56432555)
[»] chr1 (30 HSPs)
chr1 (494-538)||(11741390-11741434)
chr1 (498-538)||(46075867-46075907)
chr1 (499-538)||(23541977-23542016)
chr1 (499-538)||(36694852-36694891)
chr1 (499-538)||(36710953-36710992)
chr1 (496-538)||(37951949-37951991)
chr1 (505-538)||(943637-943670)
chr1 (505-538)||(1039381-1039414)
chr1 (505-538)||(1046287-1046320)
chr1 (505-538)||(4102714-4102747)
chr1 (506-535)||(11353065-11353094)
chr1 (505-538)||(13343777-13343810)
chr1 (505-538)||(15811232-15811265)
chr1 (506-535)||(15892566-15892595)
chr1 (505-538)||(30289862-30289895)
chr1 (505-538)||(30290269-30290302)
chr1 (506-535)||(34931084-34931113)
chr1 (505-538)||(39363194-39363227)
chr1 (505-538)||(39497437-39497470)
chr1 (497-538)||(43456621-43456662)
chr1 (505-538)||(44649633-44649666)
chr1 (505-538)||(45039416-45039449)
chr1 (505-538)||(49907025-49907058)
chr1 (505-538)||(52431174-52431207)
chr1 (506-538)||(7763749-7763781)
chr1 (498-538)||(7783988-7784028)
chr1 (506-538)||(25509214-25509246)
chr1 (506-538)||(27037274-27037306)
chr1 (494-538)||(39750381-39750425)
chr1 (506-538)||(42276161-42276193)
[»] chr2 (22 HSPs)
chr2 (499-538)||(17408294-17408333)
chr2 (494-535)||(2200243-2200284)
chr2 (505-538)||(2438229-2438262)
chr2 (505-538)||(7491848-7491881)
chr2 (505-538)||(8031006-8031039)
chr2 (505-538)||(8716892-8716925)
chr2 (505-538)||(11201687-11201720)
chr2 (505-538)||(16669630-16669663)
chr2 (505-538)||(20252214-20252247)
chr2 (505-538)||(24300351-24300384)
chr2 (505-538)||(27560210-27560243)
chr2 (505-538)||(34062665-34062698)
chr2 (505-538)||(34883848-34883881)
chr2 (505-538)||(36131028-36131061)
chr2 (505-538)||(40607706-40607739)
chr2 (505-538)||(41450520-41450553)
chr2 (506-538)||(2060321-2060353)
chr2 (506-538)||(7116299-7116331)
chr2 (506-538)||(8912874-8912906)
chr2 (506-538)||(26322293-26322325)
chr2 (506-538)||(28566156-28566188)
chr2 (506-538)||(41003948-41003980)
[»] scaffold0122 (1 HSPs)
scaffold0122 (505-538)||(12069-12102)
[»] scaffold0121 (1 HSPs)
scaffold0121 (505-538)||(24630-24663)
[»] scaffold0029 (1 HSPs)
scaffold0029 (505-538)||(51682-51715)
[»] scaffold0012 (1 HSPs)
scaffold0012 (505-538)||(47644-47677)
[»] scaffold0009 (1 HSPs)
scaffold0009 (506-535)||(246461-246490)
[»] scaffold0008 (1 HSPs)
scaffold0008 (505-538)||(259122-259155)
[»] scaffold0674 (1 HSPs)
scaffold0674 (506-538)||(5156-5188)
[»] scaffold0549 (1 HSPs)
scaffold0549 (506-538)||(10182-10214)
[»] scaffold0339 (1 HSPs)
scaffold0339 (506-538)||(7140-7172)
[»] scaffold0240 (1 HSPs)
scaffold0240 (506-538)||(18502-18534)
[»] scaffold0161 (1 HSPs)
scaffold0161 (506-538)||(3443-3475)
[»] scaffold0107 (1 HSPs)
scaffold0107 (506-538)||(48659-48691)


Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-143; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 165 - 503
Target Start/End: Original strand, 39072097 - 39072429
Alignment:
Q  165 atatgaaaaatatttgtccatatttacaagttgtaacgtttatgtgagcttattaactcgattgatggagacaacacattgtcatatacatttagaacat 264  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  39072097 atatgaaaaatatttgtccatatttataagttgtaacgtttatgtgagcttattaactcgattgatagagacaatacattggcatatacatttagaacat 39072196  T
Q  265 ttgattattcatctttaaaaggtaaatttttagtcattagattatttgagtaaaagaattgtaacttctctcttaacaaaattttaacaaaattttatgg 364  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           || ||||||||||||||    
T  39072197 ctgattattcatctttaaaaggtaaatttttagtcattagattatttgagtaaaagaattgtaacttctctc-----------ttgacaaaattttatgg 39072285  T
Q  365 ttcaataagccattcatgataggcatgatgtttttacctcaccacatttcaatcttaattgatctaacggttgaaaatgatttttcctcgtggacaac-- 462  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||      
T  39072286 ttcaataagccattcatgataggcatgatgtttttacctcaccacatttcaatcctaattgatctaacggttgaaaatgatttttcctcgtggacaacta 39072385  T
Q  463 ---tatagtggttcatttcccatctttatattactatttactac 503  Q
       |||||||||||||||||||||||||||||||||||||||||    
T  39072386 tattatagtggttcatttcccatctttatattactatttactac 39072429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 173
Target Start/End: Original strand, 39071284 - 39071430
Alignment:
Q  23 aaggttgtgtagcactttccatggaagcatgtagcgaccaacaagtttatagtcaaggggttcagtttttctatatattaaaagaacatacattttttct 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| |||||||||||    
T  39071284 aaggttgtgtagcactttccatggaagcatgtagcgaccaacaagtttatagtcaaggggttcagtttttc----tattaaaagaacagacattttttct 39071379  T
Q  123 taattaatatgaaggacaagttgtcaaatttatatatagtaaatatgaaaa 173  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  39071380 taattaatataaagtacaagttgtcaaatttatatatagtaaatatgaaaa 39071430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 538
Target Start/End: Complemental strand, 3497838 - 3497800
Alignment:
Q  500 ctaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  3497838 ctactccctccgttcctaattataagacccttttgagaa 3497800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 25601093 - 25601060
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    ||||||||||||||||||||||||||||||||||    
T  25601093 ccctccgttcctaattataagacccttttgagaa 25601060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 13759479 - 13759447
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||||||||||||||||||||||||||    
T  13759479 cctccgttcctaattataagacccttttgagaa 13759447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 1265953 - 1265986
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  1265953 ccctccgtccctaattataagacccttttgagaa 1265986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 6673261 - 6673228
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  6673261 ccctccgtccctaattataagacccttttgagaa 6673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 9828397 - 9828430
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  9828397 ccctccgtccctaattataagacccttttgagaa 9828430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 14913652 - 14913685
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  14913652 ccctccgtccctaattataagacccttttgagaa 14913685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 16127263 - 16127296
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  16127263 ccctccgtccctaattataagacccttttgagaa 16127296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 22527696 - 22527729
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  22527696 ccctccgtccctaattataagacccttttgagaa 22527729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 26894906 - 26894873
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  26894906 ccctccgtccctaattataagacccttttgagaa 26894873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 40004442 - 40004409
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  40004442 ccctccgtccctaattataagacccttttgagaa 40004409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 3028018 - 3028050
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  3028018 cctccgtccctaattataagacccttttgagaa 3028050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 7951566 - 7951598
Alignment:
Q  505 ccctccgttcctaattataagacccttttgaga 537  Q
    |||||||| ||||||||||||||||||||||||    
T  7951566 ccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 8949817 - 8949849
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  8949817 cctccgtccctaattataagacccttttgagaa 8949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 23260170 - 23260138
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  23260170 cctccgtccctaattataagacccttttgagaa 23260138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 23286506 - 23286474
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  23286506 cctccgtccctaattataagacccttttgagaa 23286474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 34662208 - 34662240
Alignment:
Q  505 ccctccgttcctaattataagacccttttgaga 537  Q
    |||||||| ||||||||||||||||||||||||    
T  34662208 ccctccgtccctaattataagacccttttgaga 34662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 43060443 - 43060411
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  43060443 cctccgtccctaattataagacccttttgagaa 43060411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 312
Target Start/End: Complemental strand, 35826668 - 35826625
Alignment:
Q  269 ttattcatctttaaaaggtaaatttttagtcattagattatttg 312  Q
    |||||||||||| ||||||||||||||||||||||| |||||||    
T  35826668 ttattcatcttttaaaggtaaatttttagtcattaggttatttg 35826625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 14584163 - 14584131
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||||||||||||||||||||||||||    
T  14584163 cctccgttcctaattataagacccttttgagaa 14584131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 538
Target Start/End: Original strand, 34568485 - 34568527
Alignment:
Q  496 tttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||| ||| |||||||| |||||||||||||||||||||||||    
T  34568485 tttaatactccctccgtccctaattataagacccttttgagaa 34568527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 51128 - 51095
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  51128 ccctccgtccctaattataagacccttttgagaa 51095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 1774346 - 1774379
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  1774346 ccctccgtccctaattataagacccttttgagaa 1774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 2944305 - 2944272
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  2944305 ccctccgtccctaattataagacccttttgagaa 2944272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 8251966 - 8251933
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  8251966 ccctccgtccctaattataagacccttttgagaa 8251933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 535
Target Start/End: Original strand, 8797033 - 8797062
Alignment:
Q  506 cctccgttcctaattataagacccttttga 535  Q
    ||||||||||||||||||||||||||||||    
T  8797033 cctccgttcctaattataagacccttttga 8797062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 8951461 - 8951428
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  8951461 ccctccgtccctaattataagacccttttgagaa 8951428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 13153932 - 13153965
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  13153932 ccctccgtccctaattataagacccttttgagaa 13153965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 18455712 - 18455757
Alignment:
Q  493 ctatttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||| |||||| |||||||| |||||||||||||||||||| ||||    
T  18455712 ctatctactactccctccgtccctaattataagacccttttaagaa 18455757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 18754148 - 18754181
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  18754148 ccctccgtccctaattataagacccttttgagaa 18754181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 28192208 - 28192175
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  28192208 ccctccgtccctaattataagacccttttgagaa 28192175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 28572050 - 28572083
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  28572050 ccctccgtccctaattataagacccttttgagaa 28572083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 28579643 - 28579676
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  28579643 ccctccgtccctaattataagacccttttgagaa 28579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 32675790 - 32675757
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  32675790 ccctccgtccctaattataagacccttttgagaa 32675757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 33745928 - 33745895
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||||||||||||||| |||||||||||    
T  33745928 ccctccgttcctaattataagatccttttgagaa 33745895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 39029182 - 39029215
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  39029182 ccctccgtccctaattataagacccttttgagaa 39029215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 2152272 - 2152240
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  2152272 cctccgtccctaattataagacccttttgagaa 2152240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 5162309 - 5162341
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  5162309 cctccgtccctaattataagacccttttgagaa 5162341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 8566207 - 8566239
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||||||||||||||| ||||||||||    
T  8566207 cctccgttcctaattataagactcttttgagaa 8566239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 538
Target Start/End: Original strand, 11798602 - 11798642
Alignment:
Q  498 tactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||| ||||| || |||||||||||||||||||||||||    
T  11798602 tactactccctctgtccctaattataagacccttttgagaa 11798642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 12802616 - 12802648
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  12802616 cctccgtccctaattataagacccttttgagaa 12802648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 17069876 - 17069844
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  17069876 cctccgtccctaattataagacccttttgagaa 17069844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 17578397 - 17578429
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  17578397 cctccgtccctaattataagacccttttgagaa 17578429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 18641412 - 18641380
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  18641412 cctccgtccctaattataagacccttttgagaa 18641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 534
Target Start/End: Original strand, 43653940 - 43653976
Alignment:
Q  498 tactaccccctccgttcctaattataagacccttttg 534  Q
    |||||| |||||||| |||||||||||||||||||||    
T  43653940 tactactccctccgtccctaattataagacccttttg 43653976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 45260228 - 45260260
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    |||| ||||||||||||||||||||||||||||    
T  45260228 cctctgttcctaattataagacccttttgagaa 45260260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 538
Target Start/End: Complemental strand, 36711336 - 36711298
Alignment:
Q  500 ctaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  36711336 ctactccctccgttcctaattataagacccttttgagaa 36711298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 32814425 - 32814470
Alignment:
Q  493 ctatttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||||    
T  32814425 ctatttaatactccctccgtccctaattataagacccttttgagaa 32814470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 538
Target Start/End: Original strand, 19920560 - 19920600
Alignment:
Q  498 tactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  19920560 tactactccctccgtccctaattataagacccttttgagaa 19920600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 32643789 - 32643757
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||||||||||||||||||||||||||    
T  32643789 cctccgttcctaattataagacccttttgagaa 32643757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 538
Target Start/End: Complemental strand, 39871656 - 39871613
Alignment:
Q  495 atttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||    
T  39871656 atttaatactccctccgtccctaattataagacccttttgagaa 39871613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 538
Target Start/End: Complemental strand, 45778265 - 45778222
Alignment:
Q  495 atttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||| ||||||||||||||||||||||  |||||||||    
T  45778265 atttactacctcctccgttcctaattataagacaattttgagaa 45778222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 538
Target Start/End: Original strand, 39197713 - 39197755
Alignment:
Q  496 tttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||| ||| |||||||| |||||||||||||||||||||||||    
T  39197713 tttattactccctccgtccctaattataagacccttttgagaa 39197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 21295155 - 21295188
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  21295155 ccctccgtccctaattataagacccttttgagaa 21295188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 26255100 - 26255133
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  26255100 ccctccgtccctaattataagacccttttgagaa 26255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 29286070 - 29286037
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  29286070 ccctccgtccctaattataagacccttttgagaa 29286037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 32872408 - 32872375
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  32872408 ccctccgtccctaattataagacccttttgagaa 32872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 33858899 - 33858866
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  33858899 ccctccgtccctaattataagacccttttgagaa 33858866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 36698164 - 36698131
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  36698164 ccctccgtccctaattataagacccttttgagaa 36698131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 38858302 - 38858335
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  38858302 ccctccgtccctaattataagacccttttgagaa 38858335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 41026129 - 41026096
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  41026129 ccctccgtccctaattataagacccttttgagaa 41026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 41252394 - 41252361
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  41252394 ccctccgtccctaattataagacccttttgagaa 41252361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 48521033 - 48521066
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  48521033 ccctccgtccctaattataagacccttttgagaa 48521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 2290048 - 2290016
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  2290048 cctccgtccctaattataagacccttttgagaa 2290016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 534
Target Start/End: Original strand, 9036674 - 9036702
Alignment:
Q  506 cctccgttcctaattataagacccttttg 534  Q
    |||||||||||||||||||||||||||||    
T  9036674 cctccgttcctaattataagacccttttg 9036702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 538
Target Start/End: Complemental strand, 25247730 - 25247690
Alignment:
Q  498 tactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||| |||||||| |||||||||||||| ||||||||||    
T  25247730 tactactccctccgtccctaattataagactcttttgagaa 25247690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 31458002 - 31458034
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  31458002 cctccgtccctaattataagacccttttgagaa 31458034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 31769364 - 31769332
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  31769364 cctccgtccctaattataagacccttttgagaa 31769332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 34012549 - 34012517
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  34012549 cctccgtccctaattataagacccttttgagaa 34012517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 40300234 - 40300266
Alignment:
Q  505 ccctccgttcctaattataagacccttttgaga 537  Q
    |||||||| ||||||||||||||||||||||||    
T  40300234 ccctccgtccctaattataagacccttttgaga 40300266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 497 - 538
Target Start/End: Complemental strand, 3823 - 3782
Alignment:
Q  497 ttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||| |||||||||||||||||||||||||    
T  3823 ttactactccctccgtccctaattataagacccttttgagaa 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 925966 - 925933
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    ||||||||||||||||||||||||||||||||||    
T  925966 ccctccgttcctaattataagacccttttgagaa 925933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 6147387 - 6147420
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    ||||||||||||||||||||||||||||||||||    
T  6147387 ccctccgttcctaattataagacccttttgagaa 6147420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 497 - 538
Target Start/End: Original strand, 8743184 - 8743225
Alignment:
Q  497 ttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||| |||||||||||||||||||||||||    
T  8743184 ttactactccctccgtccctaattataagacccttttgagaa 8743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 231138 - 231105
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  231138 ccctccgtccctaattataagacccttttgagaa 231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 4844404 - 4844437
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  4844404 ccctccgtccctaattataagacccttttgagaa 4844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 536
Target Start/End: Complemental strand, 23398178 - 23398141
Alignment:
Q  499 actaccccctccgttcctaattataagacccttttgag 536  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  23398178 actactccctccgtccctaattataagacccttttgag 23398141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 29036130 - 29036163
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||||||||||||||| |||||||||||    
T  29036130 ccctccgttcctaattataagatccttttgagaa 29036163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 30248651 - 30248684
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  30248651 ccctccgtccctaattataagacccttttgagaa 30248684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 34301865 - 34301832
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  34301865 ccctccgtccctaattataagacccttttgagaa 34301832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 402653 - 402621
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  402653 cctccgtccctaattataagacccttttgagaa 402621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 2090663 - 2090695
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  2090663 cctccgtccctaattataagacccttttgagaa 2090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 8670140 - 8670172
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||||||||||||| |||||||||||||||    
T  8670140 cctccgttcctaattatcagacccttttgagaa 8670172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 534
Target Start/End: Original strand, 9388526 - 9388562
Alignment:
Q  498 tactaccccctccgttcctaattataagacccttttg 534  Q
    |||||| |||||||| |||||||||||||||||||||    
T  9388526 tactactccctccgtccctaattataagacccttttg 9388562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 13901646 - 13901678
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  13901646 cctccgtccctaattataagacccttttgagaa 13901678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 15498634 - 15498666
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  15498634 cctccgtccctaattataagacccttttgagaa 15498666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 17227559 - 17227527
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  17227559 cctccgtccctaattataagacccttttgagaa 17227527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 23604465 - 23604497
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  23604465 cctccgtccctaattataagacccttttgagaa 23604497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 25045675 - 25045643
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  25045675 cctccgtccctaattataagacccttttgagaa 25045643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 34915575 - 34915543
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  34915575 cctccgtccctaattataagacccttttgagaa 34915543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 26306640 - 26306607
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    ||||||||||||||||||||||||||||||||||    
T  26306640 ccctccgttcctaattataagacccttttgagaa 26306607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 538
Target Start/End: Original strand, 45252770 - 45252810
Alignment:
Q  498 tactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  45252770 tactactccctccgtccctaattataagacccttttgagaa 45252810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 538
Target Start/End: Complemental strand, 50647988 - 50647944
Alignment:
Q  494 tatttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||    
T  50647988 tatttactactccctccgtctctaattataagacccttttgagaa 50647944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 538
Target Start/End: Original strand, 7181344 - 7181387
Alignment:
Q  495 atttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||    
T  7181344 atttaatactccctccgtccctaattataagacccttttgagaa 7181387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 538
Target Start/End: Complemental strand, 46050029 - 46049986
Alignment:
Q  495 atttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||    
T  46050029 atttattactccctccgtccctaattataagacccttttgagaa 46049986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 9499530 - 9499497
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  9499530 ccctccgtccctaattataagacccttttgagaa 9499497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 10220937 - 10220970
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  10220937 ccctccgtccctaattataagacccttttgagaa 10220970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 12050425 - 12050392
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  12050425 ccctccgtccctaattataagacccttttgagaa 12050392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 14428614 - 14428647
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  14428614 ccctccgtccctaattataagacccttttgagaa 14428647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 21756490 - 21756523
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  21756490 ccctccgtccctaattataagacccttttgagaa 21756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 22103962 - 22103929
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  22103962 ccctccgtccctaattataagacccttttgagaa 22103929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 25149155 - 25149122
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  25149155 ccctccgtccctaattataagacccttttgagaa 25149122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 26593798 - 26593765
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  26593798 ccctccgtccctaattataagacccttttgagaa 26593765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 30041050 - 30041017
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    ||||||||||||||||||||||| ||||||||||    
T  30041050 ccctccgttcctaattataagactcttttgagaa 30041017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 35868116 - 35868083
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  35868116 ccctccgtccctaattataagacccttttgagaa 35868083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 37728717 - 37728750
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  37728717 ccctccgtccctaattataagacccttttgagaa 37728750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 43868107 - 43868140
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  43868107 ccctccgtccctaattataagacccttttgagaa 43868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 44543786 - 44543819
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  44543786 ccctccgtccctaattataagacccttttgagaa 44543819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 538
Target Start/End: Complemental strand, 49127235 - 49127198
Alignment:
Q  501 taccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  49127235 taccccctccgtccctaattataagacctttttgagaa 49127198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 51284095 - 51284062
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  51284095 ccctccgtccctaattataagacccttttgagaa 51284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 535
Target Start/End: Original strand, 53361583 - 53361628
Alignment:
Q  490 ttactatttactaccccctccgttcctaattataagacccttttga 535  Q
    |||||| ||||||| || ||||| ||||||||||||||||||||||    
T  53361583 ttactaattactactccatccgtccctaattataagacccttttga 53361628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 4024056 - 4024088
Alignment:
Q  505 ccctccgttcctaattataagacccttttgaga 537  Q
    |||||||| ||||||||||||||||||||||||    
T  4024056 ccctccgtccctaattataagacccttttgaga 4024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 4759383 - 4759351
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  4759383 cctccgtccctaattataagacccttttgagaa 4759351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 8321930 - 8321962
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  8321930 cctccgtccctaattataagacccttttgagaa 8321962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 534
Target Start/End: Complemental strand, 20862501 - 20862461
Alignment:
Q  494 tatttactaccccctccgttcctaattataagacccttttg 534  Q
    |||||| ||| |||||||| |||||||||||||||||||||    
T  20862501 tatttaatactccctccgtccctaattataagacccttttg 20862461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 20918224 - 20918256
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  20918224 cctccgtccctaattataagacccttttgagaa 20918256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 20927186 - 20927218
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  20927186 cctccgtccctaattataagacccttttgagaa 20927218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 24087367 - 24087335
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  24087367 cctccgtccctaattataagacccttttgagaa 24087335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 26058551 - 26058583
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  26058551 cctccgtccctaattataagacccttttgagaa 26058583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 41392912 - 41392880
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  41392912 cctccgtccctaattataagacccttttgagaa 41392880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 46703032 - 46703064
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  46703032 cctccgtccctaattataagacccttttgagaa 46703064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 46845524 - 46845492
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  46845524 cctccgtccctaattataagacccttttgagaa 46845492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 47066939 - 47066971
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  47066939 cctccgtccctaattataagacccttttgagaa 47066971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 538
Target Start/End: Complemental strand, 50726823 - 50726783
Alignment:
Q  498 tactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||| |||||||| ||| |||||||||||||||||||||    
T  50726823 tactactccctccgtccctgattataagacccttttgagaa 50726783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 538
Target Start/End: Original strand, 50786025 - 50786065
Alignment:
Q  498 tactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||| |||||||| ||| |||||||||||||||||||||    
T  50786025 tactactccctccgtccctgattataagacccttttgagaa 50786065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 51145149 - 51145105
Alignment:
Q  269 ttattcatctttaaaaggtaaatttttagtcattagattatttga 313  Q
    |||||||| ||||||| || ||||||||||||||| |||||||||    
T  51145149 ttattcatttttaaaatgtgaatttttagtcattaaattatttga 51145105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 468537 - 468505
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||||||||||||||||||||||||||    
T  468537 cctccgttcctaattataagacccttttgagaa 468505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 537
Target Start/End: Complemental strand, 36130122 - 36130091
Alignment:
Q  506 cctccgttcctaattataagacccttttgaga 537  Q
    ||||||||||||||||||||||||||||||||    
T  36130122 cctccgttcctaattataagacccttttgaga 36130091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 537
Target Start/End: Original strand, 37518009 - 37518040
Alignment:
Q  506 cctccgttcctaattataagacccttttgaga 537  Q
    ||||||||||||||||||||||||||||||||    
T  37518009 cctccgttcctaattataagacccttttgaga 37518040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 537
Target Start/End: Original strand, 37522225 - 37522256
Alignment:
Q  506 cctccgttcctaattataagacccttttgaga 537  Q
    ||||||||||||||||||||||||||||||||    
T  37522225 cctccgttcctaattataagacccttttgaga 37522256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 538
Target Start/End: Complemental strand, 50451256 - 50451225
Alignment:
Q  507 ctccgttcctaattataagacccttttgagaa 538  Q
    ||||||||||||||||||||||||||||||||    
T  50451256 ctccgttcctaattataagacccttttgagaa 50451225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 535
Target Start/End: Original strand, 1028522 - 1028552
Alignment:
Q  505 ccctccgttcctaattataagacccttttga 535  Q
    |||||||||||||||||||||||||||||||    
T  1028522 ccctccgttcctaattataagacccttttga 1028552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 499 - 537
Target Start/End: Complemental strand, 26626041 - 26626003
Alignment:
Q  499 actaccccctccgttcctaattataagacccttttgaga 537  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  26626041 actactccctccgtccctaattataagacccttttgaga 26626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 538
Target Start/End: Complemental strand, 32033031 - 32032993
Alignment:
Q  500 ctaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  32033031 ctactccctccgtccctaattataagacccttttgagaa 32032993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 4035829 - 4035862
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  4035829 ccctccgtccctaattataagacccttttgagaa 4035862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 5375590 - 5375557
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  5375590 ccctccgtccctaattataagacccttttgagaa 5375557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 5743692 - 5743659
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  5743692 ccctccgtccctaattataagacccttttgagaa 5743659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 9328273 - 9328240
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  9328273 ccctccgtccctaattataagacccttttgagaa 9328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 535
Target Start/End: Complemental strand, 23777834 - 23777805
Alignment:
Q  506 cctccgttcctaattataagacccttttga 535  Q
    ||||||||||||||||||||||||||||||    
T  23777834 cctccgttcctaattataagacccttttga 23777805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 30771532 - 30771565
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  30771532 ccctccgtccctaattataagacccttttgagaa 30771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 33413522 - 33413555
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  33413522 ccctccgtccctaattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 34273252 - 34273219
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  34273252 ccctccgtccctaattataagacccttttgagaa 34273219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 44294793 - 44294826
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  44294793 ccctccgtccctaattataagacccttttgagaa 44294826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 45742839 - 45742806
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  45742839 ccctccgtccctaattataagacccttttgagaa 45742806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 47806864 - 47806897
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  47806864 ccctccgtccctaattataagacccttttgagaa 47806897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 52977986 - 52978019
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  52977986 ccctccgtccctaattataagacccttttgagaa 52978019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 4415970 - 4416002
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  4415970 cctccgtccctaattataagacccttttgagaa 4416002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 538
Target Start/End: Complemental strand, 17610064 - 17610020
Alignment:
Q  494 tatttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||| ||| |||||||| ||||||||||||| |||||||||||    
T  17610064 tatttaatactccctccgtccctaattataagatccttttgagaa 17610020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 499 - 535
Target Start/End: Complemental strand, 20391476 - 20391440
Alignment:
Q  499 actaccccctccgttcctaattataagacccttttga 535  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  20391476 actactccctccgtccctaattataagacccttttga 20391440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 20455213 - 20455181
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  20455213 cctccgtccctaattataagacccttttgagaa 20455181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 25124278 - 25124246
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  25124278 cctccgtccctaattataagacccttttgagaa 25124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 28501418 - 28501386
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  28501418 cctccgtccctaattataagacccttttgagaa 28501386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 29520196 - 29520164
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  29520196 cctccgtccctaattataagacccttttgagaa 29520164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 31937081 - 31937113
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  31937081 cctccgtccctaattataagacccttttgagaa 31937113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 41620519 - 41620551
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  41620519 cctccgtccctaattataagacccttttgagaa 41620551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 43388025 - 43387993
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  43388025 cctccgtccctaattataagacccttttgagaa 43387993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 46949997 - 46950029
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  46949997 cctccgtccctaattataagacccttttgagaa 46950029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 47228760 - 47228728
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  47228760 cctccgtccctaattataagacccttttgagaa 47228728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 49373725 - 49373693
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  49373725 cctccgtccctaattataagacccttttgagaa 49373693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 49793096 - 49793128
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  49793096 cctccgtccctaattataagacccttttgagaa 49793128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 53564388 - 53564356
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  53564388 cctccgtccctaattataagacccttttgagaa 53564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 56432523 - 56432555
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  56432523 cctccgtccctaattataagacccttttgagaa 56432555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 538
Target Start/End: Original strand, 11741390 - 11741434
Alignment:
Q  494 tatttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||    
T  11741390 tatttaatactccctccgtccctaattataagacccttttgagaa 11741434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 538
Target Start/End: Complemental strand, 46075907 - 46075867
Alignment:
Q  498 tactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  46075907 tactactccctccgtccctaattataagacccttttgagaa 46075867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 538
Target Start/End: Original strand, 23541977 - 23542016
Alignment:
Q  499 actaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  23541977 actactccctccgtccctaattataagacccttttgagaa 23542016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 538
Target Start/End: Original strand, 36694852 - 36694891
Alignment:
Q  499 actaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  36694852 actactccctccgtccctaattataagacccttttgagaa 36694891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 538
Target Start/End: Original strand, 36710953 - 36710992
Alignment:
Q  499 actaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  36710953 actactccctccgtccctaattataagacccttttgagaa 36710992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 538
Target Start/End: Complemental strand, 37951991 - 37951949
Alignment:
Q  496 tttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||| ||| |||||||| |||||||||||||||||||||||||    
T  37951991 tttaatactccctccgtccctaattataagacccttttgagaa 37951949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 943670 - 943637
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  943670 ccctccgtccctaattataagacccttttgagaa 943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 1039414 - 1039381
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  1039414 ccctccgtccctaattataagacccttttgagaa 1039381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 1046320 - 1046287
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  1046320 ccctccgtccctaattataagacccttttgagaa 1046287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 4102747 - 4102714
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  4102747 ccctccgtccctaattataagacccttttgagaa 4102714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 535
Target Start/End: Complemental strand, 11353094 - 11353065
Alignment:
Q  506 cctccgttcctaattataagacccttttga 535  Q
    ||||||||||||||||||||||||||||||    
T  11353094 cctccgttcctaattataagacccttttga 11353065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 13343777 - 13343810
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  13343777 ccctccgtccctaattataagacccttttgagaa 13343810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 15811265 - 15811232
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  15811265 ccctccgtccctaattataagacccttttgagaa 15811232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 535
Target Start/End: Complemental strand, 15892595 - 15892566
Alignment:
Q  506 cctccgttcctaattataagacccttttga 535  Q
    ||||||||||||||||||||||||||||||    
T  15892595 cctccgttcctaattataagacccttttga 15892566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 30289895 - 30289862
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  30289895 ccctccgtccctaattataagacccttttgagaa 30289862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 30290269 - 30290302
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  30290269 ccctccgtccctaattataagacccttttgagaa 30290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 535
Target Start/End: Original strand, 34931084 - 34931113
Alignment:
Q  506 cctccgttcctaattataagacccttttga 535  Q
    ||||||||||||||||||||||||||||||    
T  34931084 cctccgttcctaattataagacccttttga 34931113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 39363227 - 39363194
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  39363227 ccctccgtccctaattataagacccttttgagaa 39363194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 39497437 - 39497470
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  39497437 ccctccgtccctaattataagacccttttgagaa 39497470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 538
Target Start/End: Complemental strand, 43456662 - 43456621
Alignment:
Q  497 ttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||  ||||||| |||||||||||||||||||||||||    
T  43456662 ttactactacctccgtccctaattataagacccttttgagaa 43456621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 44649633 - 44649666
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  44649633 ccctccgtccctaattataagacccttttgagaa 44649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 45039416 - 45039449
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  45039416 ccctccgtccctaattataagacccttttgagaa 45039449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 49907025 - 49907058
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  49907025 ccctccgtccctaattataagacccttttgagaa 49907058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 52431207 - 52431174
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  52431207 ccctccgtccctaattataagacccttttgagaa 52431174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 7763781 - 7763749
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  7763781 cctccgtccctaattataagacccttttgagaa 7763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 538
Target Start/End: Original strand, 7783988 - 7784028
Alignment:
Q  498 tactaccccctccgttcctaattataagacccttttgagaa 538  Q
    |||||| |||||||| ||||||||||| |||||||||||||    
T  7783988 tactactccctccgtccctaattataatacccttttgagaa 7784028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 25509214 - 25509246
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  25509214 cctccgtccctaattataagacccttttgagaa 25509246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 27037274 - 27037306
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  27037274 cctccgtccctaattataagacccttttgagaa 27037306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 538
Target Start/End: Complemental strand, 39750425 - 39750381
Alignment:
Q  494 tatttactaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||| |||| ||||| || |||||||||||||||||||||||||    
T  39750425 tatttcctactccctctgtccctaattataagacccttttgagaa 39750381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 42276193 - 42276161
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  42276193 cctccgtccctaattataagacccttttgagaa 42276161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 538
Target Start/End: Complemental strand, 17408333 - 17408294
Alignment:
Q  499 actaccccctccgttcctaattataagacccttttgagaa 538  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  17408333 actactccctccgtccctaattataagacccttttgagaa 17408294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 2200284 - 2200243
Alignment:
Q  494 tatttactaccccctccgttcctaattataagacccttttga 535  Q
    ||||||||||  ||||||| ||||||||||||||||||||||    
T  2200284 tatttactactacctccgtccctaattataagacccttttga 2200243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 2438229 - 2438262
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  2438229 ccctccgtccctaattataagacccttttgagaa 2438262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 7491848 - 7491881
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  7491848 ccctccgtccctaattataagacccttttgagaa 7491881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 8031039 - 8031006
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    ||||||||||||||||||||||||||||| ||||    
T  8031039 ccctccgttcctaattataagacccttttaagaa 8031006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 8716925 - 8716892
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  8716925 ccctccgtccctaattataagacccttttgagaa 8716892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 11201687 - 11201720
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  11201687 ccctccgtccctaattataagacccttttgagaa 11201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 16669630 - 16669663
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||| |||||||||||||||||||||||    
T  16669630 ccctccgttcttaattataagacccttttgagaa 16669663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 20252214 - 20252247
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  20252214 ccctccgtccctaattataagacccttttgagaa 20252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 24300384 - 24300351
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    ||||||||| ||||||||||||||||||||||||    
T  24300384 ccctccgtttctaattataagacccttttgagaa 24300351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 27560210 - 27560243
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  27560210 ccctccgtccctaattataagacccttttgagaa 27560243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 34062698 - 34062665
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  34062698 ccctccgtccctaattataagacccttttgagaa 34062665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 34883881 - 34883848
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  34883881 ccctccgtccctaattataagacccttttgagaa 34883848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 36131061 - 36131028
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  36131061 ccctccgtccctaattataagacccttttgagaa 36131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 40607706 - 40607739
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  40607706 ccctccgtccctaattataagacccttttgagaa 40607739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 41450520 - 41450553
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  41450520 ccctccgtccctaattataagacccttttgagaa 41450553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 2060321 - 2060353
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  2060321 cctccgtccctaattataagacccttttgagaa 2060353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 7116331 - 7116299
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  7116331 cctccgtccctaattataagacccttttgagaa 7116299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 8912906 - 8912874
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  8912906 cctccgtccctaattataagacccttttgagaa 8912874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 26322325 - 26322293
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  26322325 cctccgtccctaattataagacccttttgagaa 26322293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 28566156 - 28566188
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  28566156 cctccgtccctaattataagacccttttgagaa 28566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 41003948 - 41003980
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||||||||||||||||| |||||||||||    
T  41003948 cctccgttcctaattataagatccttttgagaa 41003980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 12069 - 12102
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  12069 ccctccgtccctaattataagacccttttgagaa 12102  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 24663 - 24630
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||||||||||||||||| |||||||||||    
T  24663 ccctccgttcctaattataagatccttttgagaa 24630  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 51715 - 51682
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  51715 ccctccgtccctaattataagacccttttgagaa 51682  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 47644 - 47677
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  47644 ccctccgtccctaattataagacccttttgagaa 47677  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 535
Target Start/End: Original strand, 246461 - 246490
Alignment:
Q  506 cctccgttcctaattataagacccttttga 535  Q
    ||||||||||||||||||||||||||||||    
T  246461 cctccgttcctaattataagacccttttga 246490  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 259155 - 259122
Alignment:
Q  505 ccctccgttcctaattataagacccttttgagaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  259155 ccctccgtccctaattataagacccttttgagaa 259122  T

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Target: scaffold0674 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 5156 - 5188
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  5156 cctccgtccctaattataagacccttttgagaa 5188  T

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Target: scaffold0549 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 10214 - 10182
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  10214 cctccgtccctaattataagacccttttgagaa 10182  T

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Target: scaffold0339 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Complemental strand, 7172 - 7140
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  7172 cctccgtccctaattataagacccttttgagaa 7140  T

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Target: scaffold0240 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 18502 - 18534
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  18502 cctccgtccctaattataagacccttttgagaa 18534  T

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Target: scaffold0161 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 3443 - 3475
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  3443 cctccgtccctaattataagacccttttgagaa 3475  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 48659 - 48691
Alignment:
Q  506 cctccgttcctaattataagacccttttgagaa 538  Q
    ||||||| |||||||||||||||||||||||||    
T  48659 cctccgtccctaattataagacccttttgagaa 48691  T

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