View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18208_high_18 (Length: 255)

Name: NF18208_high_18
Description: NF18208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18208_high_18
NF18208_high_18
[»] chr5 (40 HSPs)
chr5 (1-238)||(13987147-13987385)
chr5 (3-102)||(87251-87350)
chr5 (8-83)||(18339093-18339168)
chr5 (3-105)||(31588336-31588439)
chr5 (3-102)||(16284275-16284374)
chr5 (3-106)||(18999363-18999466)
chr5 (3-103)||(8648055-8648155)
chr5 (1-103)||(15978389-15978490)
chr5 (3-106)||(3406850-3406952)
chr5 (3-102)||(8750350-8750449)
chr5 (25-104)||(22231172-22231251)
chr5 (3-104)||(8750009-8750110)
chr5 (3-104)||(30415474-30415574)
chr5 (3-104)||(31176506-31176607)
chr5 (10-104)||(18999637-18999731)
chr5 (3-103)||(18340640-18340740)
chr5 (3-102)||(1650006-1650104)
chr5 (1-103)||(35373454-35373550)
chr5 (1-98)||(3935682-3935779)
chr5 (12-102)||(20892544-20892633)
chr5 (4-104)||(4187827-4187927)
chr5 (31-103)||(29750877-29750948)
chr5 (25-104)||(19353081-19353160)
chr5 (3-58)||(38834768-38834823)
chr5 (15-104)||(87018-87107)
chr5 (4-104)||(119949-120049)
chr5 (4-104)||(3192222-3192321)
chr5 (3-63)||(3406499-3406559)
chr5 (4-104)||(31093418-31093517)
chr5 (36-104)||(31932817-31932885)
chr5 (3-47)||(35383296-35383340)
chr5 (4-104)||(39402211-39402310)
chr5 (25-104)||(119183-119262)
chr5 (3-42)||(3935451-3935490)
chr5 (23-102)||(37813376-37813455)
chr5 (57-102)||(26392261-26392306)
chr5 (4-104)||(5747183-5747282)
chr5 (4-104)||(6543414-6543513)
chr5 (9-37)||(29751724-29751752)
chr5 (9-37)||(29752390-29752418)
[»] chr4 (54 HSPs)
chr4 (3-104)||(30608623-30608724)
chr4 (3-102)||(3296544-3296643)
chr4 (3-104)||(7118154-7118255)
chr4 (3-104)||(51906809-51906910)
chr4 (1-104)||(56106449-56106552)
chr4 (3-106)||(3296934-3297037)
chr4 (3-104)||(29691524-29691625)
chr4 (3-104)||(38759703-38759804)
chr4 (3-104)||(51906419-51906520)
chr4 (3-104)||(48553895-48553996)
chr4 (3-106)||(34128991-34129094)
chr4 (2-99)||(5544788-5544885)
chr4 (3-104)||(41510067-41510168)
chr4 (3-95)||(26984152-26984244)
chr4 (3-103)||(35166856-35166956)
chr4 (3-114)||(29691902-29692013)
chr4 (3-102)||(34129290-34129389)
chr4 (25-105)||(34294450-34294528)
chr4 (3-111)||(48760105-48760213)
chr4 (4-103)||(54142325-54142424)
chr4 (1-83)||(30952989-30953071)
chr4 (3-92)||(26168004-26168092)
chr4 (3-66)||(30608282-30608345)
chr4 (4-106)||(54143492-54143594)
chr4 (3-92)||(52398691-52398780)
chr4 (25-104)||(17288385-17288464)
chr4 (53-104)||(19310786-19310837)
chr4 (10-102)||(26168389-26168483)
chr4 (4-106)||(12922639-12922740)
chr4 (25-106)||(29691751-29691832)
chr4 (4-113)||(40841452-40841560)
chr4 (9-102)||(48759813-48759904)
chr4 (4-104)||(1317483-1317582)
chr4 (1-68)||(30048004-30048071)
chr4 (1-68)||(30062345-30062412)
chr4 (3-101)||(35469053-35469151)
chr4 (20-102)||(1791149-1791231)
chr4 (4-106)||(2669429-2669530)
chr4 (53-106)||(1791318-1791371)
chr4 (10-91)||(25917035-25917116)
chr4 (4-105)||(46262633-46262733)
chr4 (4-104)||(17287486-17287586)
chr4 (4-104)||(30546137-30546236)
chr4 (4-104)||(38026098-38026197)
chr4 (4-104)||(43979980-43980079)
chr4 (4-104)||(54167493-54167593)
chr4 (1-102)||(1791536-1791638)
chr4 (25-104)||(2669006-2669084)
chr4 (4-111)||(28957733-28957839)
chr4 (25-103)||(10580040-10580118)
chr4 (4-104)||(789894-789993)
chr4 (64-104)||(32192440-32192480)
chr4 (4-104)||(49426343-49426443)
chr4 (83-111)||(53569029-53569057)
[»] chr7 (37 HSPs)
chr7 (3-107)||(20543907-20544011)
chr7 (3-102)||(44803622-44803721)
chr7 (3-95)||(22948868-22948960)
chr7 (3-104)||(18152755-18152856)
chr7 (8-104)||(17075612-17075708)
chr7 (3-106)||(32092519-32092622)
chr7 (4-104)||(17075218-17075318)
chr7 (14-105)||(32092226-32092317)
chr7 (10-104)||(6621113-6621206)
chr7 (3-101)||(11974666-11974764)
chr7 (3-103)||(23548997-23549097)
chr7 (1-104)||(42750106-42750207)
chr7 (3-106)||(28852690-28852793)
chr7 (3-104)||(10466769-10466870)
chr7 (4-104)||(16755624-16755723)
chr7 (7-102)||(5029748-5029842)
chr7 (3-102)||(28838356-28838452)
chr7 (3-106)||(28854674-28854777)
chr7 (4-103)||(29783935-29784033)
chr7 (3-101)||(20544301-20544398)
chr7 (12-104)||(12933060-12933152)
chr7 (3-101)||(11975053-11975150)
chr7 (4-101)||(27311039-27311140)
chr7 (14-101)||(30938597-30938684)
chr7 (25-104)||(30939576-30939655)
chr7 (25-103)||(27310047-27310125)
chr7 (38-106)||(23548051-23548119)
chr7 (25-104)||(18443621-18443699)
chr7 (5-95)||(12908389-12908479)
chr7 (12-98)||(49053880-49053966)
chr7 (4-61)||(33847907-33847964)
chr7 (4-104)||(1244434-1244533)
chr7 (4-104)||(28898028-28898127)
chr7 (4-104)||(41298667-41298766)
chr7 (3-40)||(23548670-23548707)
chr7 (22-103)||(49053716-49053797)
chr7 (14-62)||(33848298-33848346)
[»] chr3 (41 HSPs)
chr3 (3-106)||(51471332-51471435)
chr3 (3-103)||(13637770-13637870)
chr3 (3-104)||(22814295-22814396)
chr3 (3-117)||(44504376-44504490)
chr3 (3-104)||(9218503-9218604)
chr3 (3-104)||(43933439-43933540)
chr3 (3-95)||(44504100-44504192)
chr3 (11-104)||(25770320-25770413)
chr3 (1-102)||(9217821-9217922)
chr3 (3-100)||(37172084-37172181)
chr3 (16-104)||(132062-132150)
chr3 (3-104)||(26741294-26741391)
chr3 (3-67)||(51755904-51755968)
chr3 (3-102)||(43933718-43933816)
chr3 (31-104)||(45728335-45728408)
chr3 (3-99)||(50732229-50732325)
chr3 (3-99)||(50780530-50780626)
chr3 (3-101)||(38485699-38485796)
chr3 (29-104)||(22814597-22814672)
chr3 (3-101)||(25770706-25770804)
chr3 (12-106)||(34743469-34743563)
chr3 (3-104)||(27013412-27013509)
chr3 (25-104)||(48868599-48868678)
chr3 (25-102)||(33226934-33227011)
chr3 (4-104)||(46689681-46689780)
chr3 (4-104)||(48867649-48867749)
chr3 (3-101)||(13637478-13637575)
chr3 (25-103)||(25770494-25770572)
chr3 (5-67)||(54588493-54588555)
chr3 (4-61)||(2388673-2388730)
chr3 (12-101)||(33225490-33225579)
chr3 (4-104)||(22407265-22407364)
chr3 (4-104)||(34949755-34949854)
chr3 (4-104)||(36899253-36899352)
chr3 (4-104)||(45539631-45539730)
chr3 (25-104)||(4199898-4199976)
chr3 (25-103)||(3799722-3799800)
chr3 (25-106)||(32837280-32837360)
chr3 (4-61)||(42606321-42606378)
chr3 (25-105)||(36899697-36899776)
chr3 (13-101)||(51507919-51508007)
[»] chr8 (38 HSPs)
chr8 (1-106)||(16662165-16662270)
chr8 (3-100)||(26243385-26243482)
chr8 (3-104)||(10047478-10047578)
chr8 (3-106)||(13315199-13315302)
chr8 (3-104)||(26997859-26997960)
chr8 (3-102)||(6297463-6297562)
chr8 (3-104)||(6298025-6298126)
chr8 (3-111)||(9800031-9800139)
chr8 (3-103)||(21006112-21006212)
chr8 (3-102)||(9800333-9800432)
chr8 (3-106)||(17915497-17915599)
chr8 (3-104)||(17914196-17914297)
chr8 (3-103)||(7344846-7344946)
chr8 (5-100)||(16662464-16662558)
chr8 (3-106)||(10047868-10047971)
chr8 (3-96)||(6297852-6297945)
chr8 (4-101)||(26720323-26720420)
chr8 (3-103)||(12489517-12489616)
chr8 (12-104)||(44803562-44803654)
chr8 (3-102)||(44148578-44148677)
chr8 (3-106)||(36155268-36155371)
chr8 (10-66)||(12489265-12489321)
chr8 (13-104)||(36156358-36156450)
chr8 (25-104)||(4624532-4624611)
chr8 (3-98)||(44024230-44024325)
chr8 (14-104)||(11089295-11089385)
chr8 (12-105)||(40304682-40304775)
chr8 (14-101)||(16682533-16682620)
chr8 (4-114)||(4624349-4624459)
chr8 (25-103)||(21005961-21006039)
chr8 (25-103)||(44024398-44024476)
chr8 (4-61)||(29917146-29917203)
chr8 (22-91)||(45369131-45369200)
chr8 (83-111)||(1737432-1737460)
chr8 (4-104)||(12734172-12734271)
chr8 (13-61)||(22601540-22601588)
chr8 (3-47)||(39234892-39234936)
chr8 (12-104)||(44802181-44802272)
[»] chr2 (35 HSPs)
chr2 (3-103)||(2191217-2191317)
chr2 (3-106)||(21182304-21182407)
chr2 (4-106)||(21264988-21265090)
chr2 (4-109)||(21217312-21217417)
chr2 (3-105)||(3691379-3691481)
chr2 (8-106)||(21216920-21217018)
chr2 (8-106)||(21265384-21265482)
chr2 (3-104)||(2517412-2517513)
chr2 (3-104)||(24093155-24093256)
chr2 (3-88)||(10706641-10706724)
chr2 (3-104)||(39729596-39729697)
chr2 (12-104)||(21267367-21267459)
chr2 (6-106)||(32860811-32860911)
chr2 (3-92)||(3691094-3691183)
chr2 (3-100)||(7083525-7083622)
chr2 (9-106)||(32114163-32114259)
chr2 (3-104)||(32114461-32114562)
chr2 (3-101)||(24093546-24093644)
chr2 (13-105)||(3624914-3625005)
chr2 (4-104)||(23222854-23222954)
chr2 (7-47)||(2606650-2606690)
chr2 (24-104)||(39600771-39600851)
chr2 (4-106)||(39096521-39096622)
chr2 (4-105)||(3854489-3854589)
chr2 (25-102)||(32861052-32861129)
chr2 (4-103)||(26525886-26525984)
chr2 (25-104)||(39947098-39947177)
chr2 (14-104)||(10708022-10708112)
chr2 (4-104)||(1804654-1804753)
chr2 (4-104)||(2035607-2035707)
chr2 (4-104)||(6476086-6476185)
chr2 (4-104)||(11451178-11451277)
chr2 (4-104)||(12090117-12090216)
chr2 (85-113)||(23787937-23787965)
chr2 (4-104)||(27377648-27377747)
[»] chr1 (35 HSPs)
chr1 (3-104)||(5172744-5172845)
chr1 (3-104)||(31436373-31436474)
chr1 (3-103)||(9880780-9880880)
chr1 (3-104)||(9880483-9880584)
chr1 (3-104)||(18179878-18179979)
chr1 (12-94)||(47541527-47541609)
chr1 (3-104)||(19895399-19895500)
chr1 (3-104)||(50359429-50359530)
chr1 (3-111)||(3591327-3591435)
chr1 (3-106)||(6751044-6751147)
chr1 (10-103)||(5683161-5683254)
chr1 (3-104)||(18180268-18180369)
chr1 (3-103)||(4288430-4288525)
chr1 (10-102)||(48155276-48155368)
chr1 (3-106)||(50359122-50359225)
chr1 (3-104)||(45664686-45664787)
chr1 (25-104)||(1500993-1501072)
chr1 (3-66)||(19895790-19895853)
chr1 (7-104)||(5683555-5683652)
chr1 (9-101)||(19976166-19976258)
chr1 (10-104)||(6751350-6751445)
chr1 (7-103)||(48154974-48155069)
chr1 (25-104)||(36793586-36793665)
chr1 (4-104)||(42723246-42723350)
chr1 (25-103)||(9123128-9123205)
chr1 (4-106)||(47410845-47410946)
chr1 (3-40)||(47541814-47541851)
chr1 (4-104)||(17968036-17968135)
chr1 (38-103)||(47542048-47542109)
chr1 (25-104)||(12869666-12869745)
chr1 (40-99)||(19976461-19976520)
chr1 (30-104)||(37927519-37927593)
chr1 (31-104)||(36792239-36792312)
chr1 (4-104)||(32266482-32266581)
chr1 (4-104)||(45230552-45230651)
[»] chr6 (26 HSPs)
chr6 (3-102)||(7645972-7646071)
chr6 (1-104)||(5974010-5974113)
chr6 (3-90)||(21113042-21113129)
chr6 (14-104)||(211440-211530)
chr6 (9-102)||(17157547-17157640)
chr6 (3-111)||(1869443-1869551)
chr6 (12-104)||(8710339-8710431)
chr6 (3-104)||(4510187-4510289)
chr6 (3-102)||(14712996-14713095)
chr6 (36-106)||(17157856-17157926)
chr6 (3-103)||(211710-211811)
chr6 (3-101)||(25932375-25932476)
chr6 (4-102)||(6162679-6162776)
chr6 (3-103)||(14712659-14712757)
chr6 (4-104)||(34984536-34984634)
chr6 (25-104)||(20522168-20522246)
chr6 (25-103)||(14712830-14712908)
chr6 (25-102)||(5975833-5975909)
chr6 (4-104)||(14257146-14257245)
chr6 (4-104)||(19579193-19579293)
chr6 (8-104)||(19595644-19595740)
chr6 (3-104)||(25932082-25932179)
chr6 (4-104)||(33107352-33107451)
chr6 (25-104)||(20521184-20521263)
chr6 (83-111)||(22971771-22971799)
chr6 (83-111)||(23816599-23816627)
[»] scaffold0063 (2 HSPs)
scaffold0063 (3-102)||(35182-35281)
scaffold0063 (3-101)||(34794-34892)
[»] scaffold0009 (2 HSPs)
scaffold0009 (3-105)||(107720-107822)
scaffold0009 (3-101)||(108112-108210)
[»] scaffold0933 (1 HSPs)
scaffold0933 (12-104)||(490-582)
[»] scaffold0177 (1 HSPs)
scaffold0177 (4-104)||(25833-25933)
[»] scaffold0085 (1 HSPs)
scaffold0085 (4-104)||(39843-39942)


Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 13987385 - 13987147
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaa-catttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattt 99  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| | |||||||||||||||||||||||||    
T  13987385 taataacggagataaaatgtgagaattttaaaaaacatttaatgaaatatagagattattcttcaaaagggcgcgaaatgtaagaactaaaaacatattt 13987286  T
Q  100 aacccaacaaaatataaaacaggtgggaactaagttgccctgatttatttttctcaaaaactaaaagttgtttctatttatatccaatccagcttcaaat 199  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13987285 aatccaacaaaatataaaacaggtgggaactaagttgccctgatttatttttctcaaaaactaaaagttgtttctatttatatccactccagcttcaaat 13987186  T
Q  200 atgatcaataatgttttacatgtccaaaaatgtgttatc 238  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13987185 atgatcaataatgttttacatgtccaaaaatgtgttatc 13987147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 87251 - 87350
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  87251 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataaggactaaaaacatatttaac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 18339168 - 18339093
Alignment:
Q  8 ggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaag 83  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18339168 ggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaaggggcgcaaaatgtaag 18339093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 31588336 - 31588439
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaagggg-cacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||||||||||||||| || |||||||||| |||||||||||| ||| |||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  31588336 ataacggagataaaatgttaggattttaaaaatatttaatgaaatgtagggactattcttcaaaggggacgcaaaatgtaaggactaaaaacatatttaa 31588435  T
Q  102 ccca 105  Q
    ||||    
T  31588436 ccca 31588439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 16284374 - 16284275
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||| |||||||||||||||    | ||||||||||| ||||||||||||||||||    
T  16284374 ataacggagataaaatatgaggattttaaaaacatttaataaaatataaagactattcttcaaaaaaacgcaaaatgtaaggactaaaaacatatttaac 16284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 18999466 - 18999363
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||| ||  |||||||||||||| | |  ||||||||||| ||||||||||||||||||    
T  18999466 ataacggagataaaatgagaggattttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaaacatatttaac 18999367  T
Q  103 ccaa 106  Q
    ||||    
T  18999366 ccaa 18999363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 8648055 - 8648155
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||| |||||||||| |||||||||| |||||||||||| || |||||||||||| || || | ||||||||||| ||||||| ||||||||||    
T  8648055 ataacggagaaaaaatgtgaggattttaaaaatatttaatgaaatgtaaagactattcttccaaaggacgcaaaatgtaaggactaaaatcatatttaac 8648154  T
Q  103 c 103  Q
    |    
T  8648155 c 8648155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 15978490 - 15978389
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttc-aaaggggcacaaaatgtaagaactaaaaacatattt 99  Q
    ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||    |||||||| |||| |||||||||||||||    
T  15978490 taataaccgagataaaatgtgag--ttttaaaaacatttaatgaaatatagagactattcttccaaaaaaacacaaaatataaggactaaaaacatattt 15978393  T
Q  100 aacc 103  Q
    ||||    
T  15978392 aacc 15978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 3406850 - 3406952
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| |||||||||||||||||||||||||| ||||||| |||||| |  |||||||||||||  ||| |||||| ||| |||||||||||||||||||    
T  3406850 ataacagagataaaatgtgagaattttaaaaatatttaataaaatattggaactattcttcaaaaaggcgcaaaatataa-aactaaaaacatatttaac 3406948  T
Q  103 ccaa 106  Q
    ||||    
T  3406949 ccaa 3406952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 8750350 - 8750449
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||| |||| |||||||| ||||||||| |||| ||| |||||||||||||||   | ||||||||||| ||||||||||||||||||    
T  8750350 ataacggagataaaatatgaggattttaaacacatttaataaaatgtagggactattcttcaaagaaacgcaaaatgtaaggactaaaaacatatttaac 8750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 22231172 - 22231251
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||| |||||| |||| ||||||||||||||||||||    
T  22231172 atttcaaaaacatttaatgaaatatagggactattctttaaaggggcgcaaaatataaggactaaaaacatatttaaccc 22231251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 8750110 - 8750009
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| |||||||| || |  |||||||||| |||||||||||| ||| || |||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  8750110 ataacgaagataaaacgttacgattttaaaaatatttaatgaaatgtagggattattattcaaaggggcgcaaaatgtaagaattaaaaacatatttaac 8750011  T
Q  103 cc 104  Q
    ||    
T  8750010 cc 8750009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 30415474 - 30415574
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||| |||||||||| |||||||||||||| |||||||| ||| ||||||||||| |||| ||  |||||||||| ||||||| ||||||||||    
T  30415474 ataacggagacaaaatgtgaggattttaaaaacatt-aatgaaatgtagggactattcttcgaaggagcgtaaaatgtaaggactaaaaccatatttaac 30415572  T
Q  103 cc 104  Q
    ||    
T  30415573 cc 30415574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 31176607 - 31176506
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||| |||||||| |||  ||||||||||||||||||||||| ||  |||| |||||||||||| | |||||| |||| ||||||||||||||||||    
T  31176607 ataacggggataaaatatgacgattttaaaaacatttaatgaaatgtatggactgttcttcaaagggacgcaaaatataaggactaaaaacatatttaac 31176508  T
Q  103 cc 104  Q
    ||    
T  31176507 cc 31176506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 18999637 - 18999731
Alignment:
Q  10 agataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||| |||||||||| |||||||||||| ||  ||||||||||||||  |   ||||||||||| ||||||||||||||||||||    
T  18999637 agataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaacatatttaaccc 18999731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 18340640 - 18340740
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||| ||||||| ||| |||  ||||||||||||||||||||||| ||  |||||||||| |||||||| ||| ||||||| ||||||| ||||||||||    
T  18340640 ataatggagatacaatatgaagattttaaaaacatttaatgaaatgtaaggactattcttaaaaggggcgcaacatgtaaggactaaaatcatatttaac 18340739  T
Q  103 c 103  Q
    |    
T  18340740 c 18340740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 1650104 - 1650006
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||| | ||||||||||||||||||||| |||| |||| | |||||||||||  ||| |||||| |||  ||||||||||||||||||    
T  1650104 ataacggagataaaatataagaattttaaaaacatttaataaaatgtagataatattcttcaaa-tggcgcaaaatataaatactaaaaacatatttaac 1650006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 35373550 - 35373454
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattta 100  Q
    ||||||||| |||||||| |||| |||||||||| |||||||||||| |||      |||||||||||| ||||||||||||| |||||||| |||||||    
T  35373550 taataacggggataaaatatgaggattttaaaaatatttaatgaaatgtag------ttcttcaaagggacacaaaatgtaaggactaaaaatatattta 35373457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 3935682 - 3935779
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatt 98  Q
    |||||||  |||||||||||||| |||||||||||| |||||||||| ||| || ||||||||||||| ||  |||||| ||| |||||||| |||||    
T  3935682 taataacaaagataaaatgtgaggattttaaaaacaattaatgaaatgtagggattattcttcaaaggagcgtaaaatgaaaggactaaaaatatatt 3935779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 20892544 - 20892633
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||| ||||||||||||||||||| |||  ||||||||||||||||||  | | |||||| |||| | ||||||||||||||||    
T  20892544 ataaaatgtgataattttaaaaacatttaattaaacgtagagactattcttcaaa-tgacgcaaaatttaaggattaaaaacatatttaac 20892633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 4187827 - 4187927
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||| | |||||||||| |||||||||| ||||| |||||| ||  ||||||| || ||||  || ||||||||| | |||||||||||||||||||    
T  4187827 taacggaaagaaaatgtgaggattttaaaaatatttattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaacc 4187926  T
Q  104 c 104  Q
    |    
T  4187927 c 4187927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 29750948 - 29750877
Alignment:
Q  31 aaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||||||||||||||  ||||||||||||||||| | ||||||| ||  ||| |||||||||||||||    
T  29750948 aaaacatttaatgaaatatat-gactattcttcaaagggacgcaaaatgcaaagactgaaaacatatttaacc 29750877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 19353081 - 19353160
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| |   |||||||||||||||   |||||||| |||| || |||||||||||||||||    
T  19353081 attttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggaccaaaaacatatttaaccc 19353160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 38834768 - 38834823
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactat 58  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||||| ||| ||||||    
T  38834768 ataacagagatcaaatgtgtgaattttaaaaacatttaatgaaatgtagggactat 38834823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 87107 - 87018
Alignment:
Q  15 aaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||||||  ||||||||||||||||||||||| ||| |  ||||||||| | |  | |||||| |||  ||||||||||||||||||||    
T  87107 aaatgtgaagattttaaaaacatttaatgaaatgtaggggttattcttcagatgaacgcaaaatataaagactaaaaacatatttaaccc 87018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 119949 - 120049
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  ||||||| || |||||||||||||||| |||||| ||  |||||||  ||||||  |  ||||||||| | || ||||||||||||||||    
T  119949 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatttgtcaaagaagggcaaaatgtagggaccaaaaacatatttaacc 120048  T
Q  104 c 104  Q
    |    
T  120049 c 120049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 3192222 - 3192321
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||  |||||||| |||||   ||||||||| || | || ||||||||||||||||    
T  3192222 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgcacaaaatatagggaccaaaaacatatttaacc 3192320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 3406559 - 3406499
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttc 63  Q
    ||||| |||||||||| | || ||||||||||||||||||||||||||   ||||||||||    
T  3406559 ataacagagataaaatataaggattttaaaaacatttaatgaaatatatgaactattcttc 3406499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 31093418 - 31093517
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| ||||||| ||||||   || ||||||||| | || ||||||||||||||||    
T  31093418 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ttcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 31093516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 31932817 - 31932885
Alignment:
Q  36 atttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||||| |||| |||||||||||  |||||||||| ||||||||| | | | ||||||||||||||||    
T  31932817 atttaataaaatgtagagactatttatcaaaggggcgcaaaatgtagggattgaaaacatatttaaccc 31932885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 35383340 - 35383296
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaat 47  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||    
T  35383340 ataacggggataaaatatgaggattttaaaaacatttaatgaaat 35383296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 39402310 - 39402211
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  39402310 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 39402212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 119262 - 119183
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| ||  |||||||||| ||||   | |||||| |||| || |||||||||||||||||    
T  119262 attttaaaaacatttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatatttaaccc 119183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 3935490 - 3935451
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaat 42  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  3935490 ataatggagataaaatgtgaggattttaaaaacatttaat 3935451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 37813455 - 37813376
Alignment:
Q  23 gaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||| |||||||||| ||  ||||||||||||||  |||  ||| |||| | |||||||| |||||||||    
T  37813455 gaattttaaaaacacttaatgaaatgtatggactattcttcaaaatggcgtaaactgtagggactaaaaatatatttaac 37813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 26392261 - 26392306
Alignment:
Q  57 attcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||| | |||||||||||||| | ||||||||||||||||    
T  26392261 attcttcaaaagtgcacaaaatgtaaggattaaaaacatatttaac 26392306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 5747183 - 5747282
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  5747183 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 5747281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 6543513 - 6543414
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  6543513 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 6543415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 29751752 - 29751724
Alignment:
Q  9 gagataaaatgtgagaattttaaaaacat 37  Q
    |||||||||||||||||||||||||||||    
T  29751752 gagataaaatgtgagaattttaaaaacat 29751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 29752418 - 29752390
Alignment:
Q  9 gagataaaatgtgagaattttaaaaacat 37  Q
    |||||||||||||||||||||||||||||    
T  29752418 gagataaaatgtgagaattttaaaaacat 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 30608623 - 30608724
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  30608623 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaagaggcacaaaatgtaaggtctaaaaacatatttaac 30608722  T
Q  103 cc 104  Q
    ||    
T  30608723 cc 30608724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 3296643 - 3296544
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  3296643 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggaatattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 3296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 7118154 - 7118255
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  7118154 ataatggagataaaatttgagaattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 7118253  T
Q  103 cc 104  Q
    ||    
T  7118254 cc 7118255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 51906809 - 51906910
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| |||||||||||||||||||| || ||| |||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  51906809 ataacggagataaaatgtgaggattttaaaaacatttaatgagatgtagggactattcttcaaaggagcgcaaaatgtaaggactaaaaacatatttaac 51906908  T
Q  103 cc 104  Q
    ||    
T  51906909 cc 51906910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 56106449 - 56106552
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattta 100  Q
    ||||||||||||||||||| ||| |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||  |||||||||||||||     
T  56106449 taataacggagataaaatgagaggattttaaaaacatttaataaaatataggaactattcttcaaaggggcacaaaatgtaaagactaaaaacatatttg 56106548  T
Q  101 accc 104  Q
    ||||    
T  56106549 accc 56106552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 3296934 - 3297037
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||||| || ||||||||||||||||||||||  ||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||    
T  3296934 ataacggagataaaatgtaaggattttaaaaacatttaatgaaacgtagggactattcttcaaagggtcgcaaaatgtaaggactaaaaatatatttaac 3297033  T
Q  103 ccaa 106  Q
    ||||    
T  3297034 ccaa 3297037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 29691625 - 29691524
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| ||   |||||| |||| ||||||||||||||||||    
T  29691625 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaatggatgcaaaatataaggactaaaaacatatttaac 29691526  T
Q  103 cc 104  Q
    ||    
T  29691525 cc 29691524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 38759804 - 38759703
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| || |||||||||||||||| ||| |||||| |||| |||||||| |||||||||    
T  38759804 ataacggagataaaatttgaggattttaaaaacatttaatgaaatgtatagactattcttcaaagaggcgcaaaatttaaggactaaaaaaatatttaac 38759705  T
Q  103 cc 104  Q
    ||    
T  38759704 cc 38759703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 51906520 - 51906419
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| || |||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||||  ||||||||||||||||||    
T  51906520 ataacggagataaaatgtgaggatattaaaaacatttaatgaaacgtagggactattcttcaaagaggcgcaaaatgtaaagactaaaaacatatttaac 51906421  T
Q  103 cc 104  Q
    ||    
T  51906420 cc 51906419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 48553996 - 48553895
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||| ||  ||||||||||||||||| | ||||||||||| ||||||||| ||||||||    
T  48553996 ataacggagataaaatgtgaggattttaaaaaggtttaatgaaatgtatggactattcttcaaagggacgcaaaatgtaaggactaaaaacgtatttaac 48553897  T
Q  103 cc 104  Q
    ||    
T  48553896 cc 48553895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 34129094 - 34128991
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| ||||||||| |||||||||||||||| |||||| |||||||| ||||||||||||||||| | ||||||||||  | || |||||||||||||    
T  34129094 ataacgaagataaaatatgagaattttaaaaacgtttaataaaatatagggactattcttcaaagggacgcaaaatgtaattattagaaacatatttaac 34128995  T
Q  103 ccaa 106  Q
    ||||    
T  34128994 ccaa 34128991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 5544885 - 5544788
Alignment:
Q  2 aataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattt 99  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||| | || |||||||| || |||||||| ||||||    
T  5544885 aataaaggagataaaatgtgagaattttaaaaatatttaatgaaatataggaactattcttcaaatgcgcgcaaaatgtgaggactaaaaagatattt 5544788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 41510168 - 41510067
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||| ||||||||||| |||| |||||| ||| ||||||| |||| ||| ||||||||||||||||||| ||||||||||| | |||||| |||||||||    
T  41510168 ataagggagataaaatatgaggattttagaaatatttaataaaatgtagggactattcttcaaaggggcgcaaaatgtaaggattaaaaatatatttaac 41510069  T
Q  103 cc 104  Q
    ||    
T  41510068 cc 41510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 26984244 - 26984152
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacat 95  Q
    ||||| ||||||||||||||| |||||||||||||||||| || | ||| ||||||||||||||| ||| |||||| ||| ||||||||||||    
T  26984244 ataactgagataaaatgtgaggattttaaaaacatttaataaagtctagggactattcttcaaagaggcgcaaaatataaaaactaaaaacat 26984152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 35166856 - 35166956
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| |||||||||||||||||||||||   | || |||| ||| ||||| | ||||||||||| |||||| |||||||||||    
T  35166856 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgctgggattatttttcgaagggacgcaaaatgtaagcactaaagacatatttaac 35166955  T
Q  103 c 103  Q
    |    
T  35166956 c 35166956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 29691902 - 29692013
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||||| | |||||| |||||||| ||  |||||| ||  |||||||||||||||||     
T  29691902 ataacagagataaaatgtgaggattttaaaaatatttaatgaaatataaaaactattattcaaaggagcgtaaaatgcaaagactaaaaacatatttaat 29692001  T
Q  103 ccaacaaaatat 114  Q
    || | |||||||    
T  29692002 cctataaaatat 29692013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 34129290 - 34129389
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||| ||| ||||||||||||||  ||  |||||||||||  || ||||||||||||||    
T  34129290 ataacagagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaattggtgcaaaatgtaagggctgaaaacatatttaac 34129389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 34294528 - 34294450
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccca 105  Q
    ||||||||||||||||||||||| ||| |||||||||||||| || ||||||||||||| |||||||| ||||||||||||    
T  34294528 attttaaaaacatttaatgaaatgtag-gactattcttcaaatggacacaaaatgtaag-actaaaaatatatttaaccca 34294450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 48760105 - 48760213
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| ||||||||||||||  ||||||||||||||||||||| | ||   |||||||||||||  | | || ||| |||||||||||||||||||||||    
T  48760105 ataacagagataaaatgtgaagattttaaaaacatttaatgaattgtacgaactattcttcaaaaagacgcacaatataagaactaaaaacatatttaac 48760204  T
Q  103 ccaacaaaa 111  Q
    |||| ||||    
T  48760205 ccaaaaaaa 48760213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 54142424 - 54142325
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| ||||||| || |||||||||||||||| |||||| ||  |||||||||||||||  || ||||||||| | ||||| |||||||||||||    
T  54142424 taacggagagaaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatgtagggactaataacatatttaacc 54142325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30952989 - 30953071
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaag 83  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| ||||||| ||| ||| |||||||||||    
T  30952989 taataaccgagataaaatgttaggattttaaaaacatttaatgaaatgtagggaccattcttctaagaggcgcaaaatgtaag 30953071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 26168092 - 26168004
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaa 92  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||| |||| ||||||||| ||| |||| ||||||||||  ||||||||    
T  26168092 ataacggagataaaatgtgaggattttaaaaatatttaat-aaatgtagaaactattctttaaaagggcgcaaaatgtaatgactaaaaa 26168004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 30608345 - 30608282
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaa 66  Q
    ||||||||||||||||||||| |||||||||| || ||||||||| ||| ||||||||||||||    
T  30608345 ataacggagataaaatgtgaggattttaaaaatatataatgaaatgtagggactattcttcaaa 30608282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 54143492 - 54143594
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| ||||||| || |||||||||||||||| | |||| ||| |||||||||||||||  |  |||||| || | ||||| |||||||||||||    
T  54143492 taacggagagaaaatgtaaggattttaaaaacatttattaaaatgtagggactattcttcaaagtcgtgcaaaatatagggactaataacatatttaacc 54143591  T
Q  104 caa 106  Q
    |||    
T  54143592 caa 54143594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 52398780 - 52398691
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaa 92  Q
    |||||| | ||||||| | ||||||||||||| ||||||| ||||  |||||||||||||||||| ||| ||||||||||| | ||||||    
T  52398780 ataacgaaaataaaatataagaattttaaaaatatttaataaaatgcagagactattcttcaaagtggcgcaaaatgtaaggaataaaaa 52398691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 17288385 - 17288464
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| ||| ||||||| |||||||  || ||||||||| | ||||| ||||||||||||||    
T  17288385 attttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaaccc 17288464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 19310837 - 19310786
Alignment:
Q  53 gactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  19310837 gactattcttcaaagaggcgcaaaatgtaaggactaaaaacatatttaaccc 19310786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 26168389 - 26168483
Alignment:
Q  10 agataaaatgtgagaattttaaaaacatttaatgaaatataga--gactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||   |||||| ||||||||||| |||| |||   ||||||||| ||||||||| ||||||||||| | ||||||||||||||||    
T  26168389 agataaaatgtggagattttagaaacatttaataaaatgtaggaggactattctacaaaggggcgcaaaatgtaaggattaaaaacatatttaac 26168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 12922740 - 12922639
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  12922740 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaattgcgcaaaatgtagggaccaaaaacatatttaacc 12922642  T
Q  104 caa 106  Q
    |||    
T  12922641 caa 12922639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 29691751 - 29691832
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacccaa 106  Q
    |||||||||||||||| |||||| || |||||||| || ||||   | ||||||||||| || |||||||||||||||||||    
T  29691751 attttaaaaacatttattgaaatgtaaagactattttttaaagtcacgcaaaatgtaaggaccaaaaacatatttaacccaa 29691832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 40841560 - 40841452
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||| |||||||||| |||   ||  |||||||| | || ||||||||||||||||    
T  40841560 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctt-aaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 40841462  T
Q  104 caacaaaata 113  Q
    ||| ||||||    
T  40841461 caaaaaaata 40841452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 48759904 - 48759813
Alignment:
Q  9 gagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||||||||||||||||||||| |||  ||  ||||||| |||||| | ||  |||||||||  ||||||||||||||||||    
T  48759904 gagataaaatgtgagaattttaaaaacatttaat-aaaagtaaggactatt-ttcaaatgagcgtaaaatgtaacgactaaaaacatatttaac 48759813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 1317483 - 1317582
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||  ||||||  |||||||||||||||| | |||||| ||| ||||||| ||||||   || ||||||||| |||| ||||||||||||||||    
T  1317483 taacggagaagaaatgtaggaattttaaaaacattcattgaaatgtagggactatt-ttcaaaatcgcgcaaaatgtaggaaccaaaaacatatttaacc 1317581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30048004 - 30048071
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaagg 68  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||| ||   ||| |||||||||||    
T  30048004 taataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactgttcttcaaagg 30048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30062345 - 30062412
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaagg 68  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||| ||   ||| |||||||||||    
T  30062345 taataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactgttcttcaaagg 30062412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 35469053 - 35469151
Alignment:
Q  3 ataacggagataaaa-tgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    ||||||||||||||| | |||| ||||||||||| ||||||||||| ||  || |||||||||| ||||| | ||||||||| | |||||| ||||||||    
T  35469053 ataacggagataaaaatttgaggattttaaaaac-tttaatgaaatgtaaggattattcttcaatggggcgcgaaatgtaaggattaaaaatatatttaa 35469151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 1791231 - 1791149
Alignment:
Q  20 tgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||| ||||| ||||||||||||||||| ||  ||||||||||||||| ||   ||||| |||  ||||||||||||||||||    
T  1791231 tgaggatttttaaaacatttaatgaaatgtatggactattcttcaaagaggtgtaaaatttaacgactaaaaacatatttaac 1791149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 2669429 - 2669530
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  2669429 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 2669527  T
Q  104 caa 106  Q
    |||    
T  2669528 caa 2669530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 1791371 - 1791318
Alignment:
Q  53 gactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacccaa 106  Q
    |||||||||||||||   | ||||||||||| ||||||||||||||||||||||    
T  1791371 gactattcttcaaagtcacgcaaaatgtaaggactaaaaacatatttaacccaa 1791318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 25917035 - 25917116
Alignment:
Q  10 agataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaa 91  Q
    ||||||||| ||| |||||||||||||||||||||||| ||  || |||||||||||  | | |||||||| || |||||||    
T  25917035 agataaaatatgaaaattttaaaaacatttaatgaaatgtatggattattcttcaaatagacgcaaaatgtgaggactaaaa 25917116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 46262733 - 46262633
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||   ||||||||||||||| | |||||| ||| ||||||| ||||||   || ||||||||| | || ||||||||||||||||    
T  46262733 taacggagaaaaaatgtagaaattttaaaaacattcattgaaatgtagggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaacc 46262635  T
Q  104 ca 105  Q
    ||    
T  46262634 ca 46262633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 17287586 - 17287486
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||  ||||||||  |||||||||||| ||||| |||||| ||  ||||||| || ||||  || ||||||||| | ||||| |||||||||||||    
T  17287586 taacggaagtaaaatgtaggaattttaaaaatatttattgaaatgtaaggactattatttaaagtagcgcaaaatgtagggactaataacatatttaacc 17287487  T
Q  104 c 104  Q
    |    
T  17287486 c 17287486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 30546137 - 30546236
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||| ||| | |||||| |||||||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  30546137 taacggagaaaaaatgtagggattttaaaaatattcattgaaatgtagagactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 30546235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 38026098 - 38026197
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| |||| ||||||||||||||||    
T  38026098 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaattgcgtaaaatgtaggaaccaaaaacatatttaacc 38026196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 43979980 - 43980079
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  43979980 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 43980078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 54167593 - 54167493
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||||||  |||||||||| |||    | ||||||||| | ||| |||||||||||||||    
T  54167593 taacggagtaaaaatgtagggattttaaaaacatttattgaaatataaggactattcttgaaaatcacgcaaaatgtagggacttaaaacatatttaacc 54167494  T
Q  104 c 104  Q
    |    
T  54167493 c 54167493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1791536 - 1791638
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatat-agagactattcttcaaaggggcacaaaatgtaagaact-aaaaacatatt 98  Q
    |||||||||||||||||||| |  |||||||||||||||||| |||| | ||| |||||| ||||||||||  ||||||  ||| | | |||||||||||    
T  1791536 taataacggagataaaatgtaaagattttaaaaacatttaataaaatgtgaga-actatttttcaaaggggagcaaaatacaaggattaaaaaacatatt 1791634  T
Q  99 taac 102  Q
    ||||    
T  1791635 taac 1791638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 2669084 - 2669006
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| ||| |||||||| |||||   ||| ||||| |||| || |||||||||||||||||    
T  2669084 attttaaaaacatttattgaaatgtagggactattc-tcaaaattgcataaaatataaggaccaaaaacatatttaaccc 2669006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 28957733 - 28957839
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  28957733 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 28957831  T
Q  104 caacaaaa 111  Q
    ||| ||||    
T  28957832 caaaaaaa 28957839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 10580118 - 10580040
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||||||||| |||||| ||  ||||||| |||||||   | ||||||||| | || ||||||||||||||||    
T  10580118 attttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtatggaccaaaaacatatttaacc 10580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 789993 - 789894
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||  ||||||| ||||||   || ||||||||| | || ||||||||||||||||    
T  789993 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtatggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaacc 789895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 32192480 - 32192440
Alignment:
Q  64 aaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||| |||||||| || ||||||||||||||||||||    
T  32192480 aaaggggcgcaaaatgtgaggactaaaaacatatttaaccc 32192440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 49426343 - 49426443
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||  |||||||| || |||||||||| ||||| |||||| ||  ||||||| || ||||  |  ||||||||| | || ||||||||||||||||    
T  49426343 taacggaagtaaaatgtaaggattttaaaaatatttattgaaatgtaaggactattatttaaagtagagcaaaatgtagggacaaaaaacatatttaacc 49426442  T
Q  104 c 104  Q
    |    
T  49426443 c 49426443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 53569057 - 53569029
Alignment:
Q  83 gaactaaaaacatatttaacccaacaaaa 111  Q
    |||||||||||||||||||||||||||||    
T  53569057 gaactaaaaacatatttaacccaacaaaa 53569029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 20544011 - 20543907
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||| |||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20544011 ataacggagataaaatatgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaaggggcacaaaatgtaagaattaaaaacatatttaac 20543912  T
Q  103 ccaac 107  Q
    |||||    
T  20543911 ccaac 20543907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 44803622 - 44803721
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  || ||||||||||| ||||||||||||||||||    
T  44803622 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattctttaaagaagcgcaaaatgtaaggactaaaaacatatttaac 44803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 22948868 - 22948960
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacat 95  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||||    
T  22948868 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagagactattcttcaaagggtcgcaaaatgtaaggactaaaaacat 22948960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 18152856 - 18152755
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||| |||||||||  |||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18152856 ataacggagataaaatgtgaggattttaagaacatttaacaaaatgtagggactattcttcaaaggggcgcaaaatgtaagaactgaaaacatatttaac 18152757  T
Q  103 cc 104  Q
    ||    
T  18152756 cc 18152755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 17075612 - 17075708
Alignment:
Q  8 ggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||| |||||||| |||||||||||    
T  17075612 ggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaaccc 17075708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 32092519 - 32092622
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| |  |||| |||  |||||||||||||||||||||||||||||||||    
T  32092519 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggacgaaacttcgaagaagcacaaaatgtaagaactaaaaacatatttaac 32092618  T
Q  103 ccaa 106  Q
    ||||    
T  32092619 ccaa 32092622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 17075318 - 17075218
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||| ||| |||||| |||| |||||||||||||||||||    
T  17075318 taacggggataaaatgtgaggattttaaaaacttttaatgaaatgtagggactattcttcaaagcggcgcaaaatataaggactaaaaacatatttaacc 17075219  T
Q  104 c 104  Q
    |    
T  17075218 c 17075218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 32092317 - 32092226
Alignment:
Q  14 aaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccca 105  Q
    |||||||||| |||||||||||||||||||||||  || ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  32092317 aaaatgtgaggattttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggactaaaaacatatttaaccca 32092226  T

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Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 6621113 - 6621206
Alignment:
Q  10 agataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  6621113 agataaaatgtgaggattttaaaa-catttaatgaaatgtagggactattcttcaaagggtcacaaaatgtaagaattaaaaacatattgaaccc 6621206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 11974764 - 11974666
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||||||||||| ||||||| |||||||||    
T  11974764 ataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtacagactatttttcaaaggagcgcaaaatgtaaggactaaaatcatatttaa 11974666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 23548997 - 23549097
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||| ||||||| |||| |||| ||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||| |||||| |||||||||    
T  23548997 ataacggaaataaaatttgaggatttcaaaaagatttaatgaaatatagagagtattcttcaaaagggcgcaaaatgtaagaaataaaaatatatttaac 23549096  T
Q  103 c 103  Q
    |    
T  23549097 c 23549097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 42750106 - 42750207
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattta 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||||||||||||||  |||||||||  |||||||  |||||||    
T  42750106 taataacggagataaaatgtgaggattttaaaaacgtttaatgaaatgtagggactattcttcaaaggggcgtaaaatgtaaagactaaaa--atattta 42750203  T
Q  101 accc 104  Q
    ||||    
T  42750204 accc 42750207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 28852793 - 28852690
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||| ||| || |||| || ||| || ||||||||||||| | ||||||||||||||||    
T  28852793 ataacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggagtattatttaaatggacacaaaatgtaaggattaaaaacatatttaac 28852694  T
Q  103 ccaa 106  Q
    ||||    
T  28852693 ccaa 28852690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 10466769 - 10466870
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||| |||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||  | | ||||||||||  | ||||||||||||||||    
T  10466769 ataatggagataaaatgtgacgattttaaaaacatttaataaaatatagagactattcttcaaatagacgcaaaatgtaaagattaaaaacatatttaac 10466868  T
Q  103 cc 104  Q
    ||    
T  10466869 cc 10466870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 16755624 - 16755723
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| ||||| |||| |||||||||| |||||||||||||||||||||||||||||||| ||| |||||| | || | |||||||||||||||||    
T  16755624 taacggagaaaaaatatgaggattttaaaaatatttaatgaaatatagagactattcttcaaagtggcgcaaaatat-aggattaaaaacatatttaacc 16755722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 5029748 - 5029842
Alignment:
Q  7 cggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| | | ||||||||||  |||||||| |||||||||    
T  5029748 cggagataaaatgtgaggattt-aaaaacatttaatgaaatatagggactattcttcaaagagacgcaaaatgtaacgactaaaaatatatttaac 5029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 28838452 - 28838356
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | | |||  ||||||||| || ||||||||||||  ||||||||||||||||||    
T  28838452 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtcgggac--ttcttcaaa-ggacacaaaatgtaaagactaaaaacatatttaac 28838356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 28854777 - 28854674
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| || |||||||||||| |||||||||||||||||| |||| ||| || ||||||| ||| |||| |||||| |||| | ||||||||||||||||    
T  28854777 ataactgaaataaaatgtgaggattttaaaaacatttaataaaatgtagggagtattctttaaatgggcgcaaaatataaggattaaaaacatatttaac 28854678  T
Q  103 ccaa 106  Q
    ||||    
T  28854677 ccaa 28854674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 29784033 - 29783935
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  |||||||||||||||||| |||||||||| |||||||| |||||   |||||||||||| | |||||||||||||||||||    
T  29784033 taacggagaaaaaatgtaggaattttaaaaacatttattgaaatatagggactattc-tcaaaatcgcacaaaatgtagggactaaaaacatatttaacc 29783935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 20544301 - 20544398
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||  ||  |||||| |||| |||||||||||||||||    
T  20544301 ataacgaagataaaatgtgaga-ttttaaaaacatttaatgaaatgtaaggactattcttcaaaaaggtgcaaaatataaggactaaaaacatatttaa 20544398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 12933060 - 12933152
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||| |||||| ||||||||| | |||||||| |||||||  |||||||  ||||||||||| | ||||||||||||||||||||    
T  12933060 ataaaatgtgaggattttagaaacatttacttaaatatagggactatttatcaaaggaacacaaaatgtagggactaaaaacatatttaaccc 12933152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 11975053 - 11975150
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||||| |||||||||||| |||||||||||||||||| |||  || |||||||| |||||||| |||| ||||||||| | |||||| ||||||||    
T  11975053 ataacggaaataaaatgtgaggattttaaaaacatttaataaaacgtaaagactatttttcaaaggagcac-aaatgtaaggattaaaaatatatttaa 11975150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 27311039 - 27311140
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaa----gaactaaaaacatattt 99  Q
    |||||| || |||||||  ||||||||||||||||||||||||| ||| |||||||||| |||| ||| ||||||||||    | |||||||||||||||    
T  27311039 taacggtgaaaaaatgtaggaattttaaaaacatttaatgaaatgtagggactattctttaaagaggcgcaaaatgtaaggagggactaaaaacatattt 27311138  T
Q  100 aa 101  Q
    ||    
T  27311139 aa 27311140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 30938684 - 30938597
Alignment:
Q  14 aaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||||  |||||||||||||||||||| |||| ||  || ||||||| |||| ||| ||||||||||| |||||||||||||||||    
T  30938684 aaaatgtaggaattttaaaaacatttaataaaatgtatggattattctttaaagaggcgcaaaatgtaaggactaaaaacatatttaa 30938597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 30939576 - 30939655
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||| |||||||||||| ||| ||||||||||| ||  |||  |||||||| | ||||||||||||||||||||    
T  30939576 attttaaaaatatttaatgaaatgtagggactattcttcgaaatggcgtaaaatgtagggactaaaaacatatttaaccc 30939655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 27310125 - 27310047
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||||||||||||||||| ||| ||| ||||||| || ||||  |||||||| | | |||||||||||||||||    
T  27310125 attttaaaaacatttaatgaaatgtagggaccattcttcgaaagggcgtaaaatgtagggaataaaaacatatttaacc 27310047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 23548119 - 23548051
Alignment:
Q  38 ttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacccaa 106  Q
    |||||||||| ||| || ||||||||||||  || |||||| |||| ||||||||||||||||||||||    
T  23548119 ttaatgaaatgtagggattattcttcaaagaagcgcaaaatataaggactaaaaacatatttaacccaa 23548051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 18443621 - 18443699
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| ||| |||||||| |||||   || ||||||||||| || |||||||||||||||||    
T  18443621 attttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtaaggaccaaaaacatatttaaccc 18443699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 12908479 - 12908389
Alignment:
Q  5 aacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacat 95  Q
    ||||||||||||||||||| |||||||||||||||| | |||| ||| || ||||  ||||| | ||  |||||||| | |||||||||||    
T  12908479 aacggagataaaatgtgaggattttaaaaacatttagttaaatgtagggattatttatcaaatgagcgtaaaatgtagggactaaaaacat 12908389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 49053880 - 49053966
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatt 98  Q
    |||||| ||||| ||||||||||| ||||||||||| ||| || |||| ||||||| | |  |||||||||| || |||||||||||    
T  49053880 ataaaacgtgaggattttaaaaacttttaatgaaatgtagggattatttttcaaagagacttaaaatgtaaggacgaaaaacatatt 49053966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 33847964 - 33847907
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattct 61  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| |||||||||||||    
T  33847964 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactattct 33847907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 1244434 - 1244533
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  1244434 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 1244532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 28898127 - 28898028
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  28898127 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 28898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 41298667 - 41298766
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  41298667 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 41298765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 23548707 - 23548670
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacattta 40  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  23548707 ataacagagataaaatgtgagtattttaaaaacattta 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 49053716 - 49053797
Alignment:
Q  22 agaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||||||||||||| ||||||  |  ||||||| |||||||   | ||||||||| | || ||||||||||||||||    
T  49053716 agaattttaaaaacatttattgaaatgcaatgactatttttcaaagtcacccaaaatgtatggaccaaaaacatatttaacc 49053797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 33848298 - 33848346
Alignment:
Q  14 aaaatgtgagaattttaaaaacatttaatgaaatatagagactattctt 62  Q
    |||||||  |||||||||||||||||| |||||| ||| ||||||||||    
T  33848298 aaaatgtaggaattttaaaaacatttattgaaatgtagggactattctt 33848346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 51471435 - 51471332
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  51471435 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaactattcttcaaagggacgcaaaatgtaagaactaagaacatatttaac 51471336  T
Q  103 ccaa 106  Q
    ||||    
T  51471335 ccaa 51471332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 13637770 - 13637870
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  13637770 ataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagagactattcttcaaaggggcgcaaaatgtaaggactagaaacatatttaac 13637869  T
Q  103 c 103  Q
    |    
T  13637870 c 13637870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 22814396 - 22814295
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  22814396 ataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaagaattaaaaacatatttaac 22814297  T
Q  103 cc 104  Q
    ||    
T  22814296 cc 22814295  T

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Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 44504376 - 44504490
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||  ||||||||||| |||||||||| |||||||    
T  44504376 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaacacatttaac 44504475  T
Q  103 ccaacaaaatataaa 117  Q
    || | |||| |||||    
T  44504476 cctaaaaaaaataaa 44504490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 9218503 - 9218604
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||  ||||||||||||||||||    
T  9218503 ataacgaagataaaatgtgatgattttaaaaacatttaatgaaatatagggactattcttcaaaggagcgcaaaatgtaatgactaaaaacatatttaac 9218602  T
Q  103 cc 104  Q
    ||    
T  9218603 cc 9218604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 43933540 - 43933439
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| |||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  43933540 ataacgaagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaacgggcacaaaatgtaaggactaaaaatatatttaac 43933441  T
Q  103 cc 104  Q
    ||    
T  43933440 cc 43933439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 44504192 - 44504100
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacat 95  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||| || |||||||||||||||||||| ||||    
T  44504192 ataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaatggacacaaaatgtaagaactaaagacat 44504100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 25770413 - 25770320
Alignment:
Q  11 gataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||||||  |||||||||||| |||||||||||||| |||||    
T  25770413 gataaaatgtgaggattctaaaaacatttaatgaaatgtagggactattcttcaaagggatacaaaatgtaaggactaaaaacatattgaaccc 25770320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9217922 - 9217821
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattta 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||  || |||||| || | |||||||  |||||||    
T  9217922 taataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcagcgcaaaatatatggactaaaacgatattta 9217823  T
Q  101 ac 102  Q
    ||    
T  9217822 ac 9217821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 37172181 - 37172084
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattta 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||| |||   || ||||||||||| |||||||| |||||||    
T  37172181 ataacggagataaactgtgaggattttaaaaacatttaatgaaatgtagagactattctttaaataagcgcaaaatgtaaggactaaaaaaatattta 37172084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 132062 - 132150
Alignment:
Q  16 aatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||| ||||||||||||||||||||||| ||  |||||||||||||||| |  ||||||||||| |||||| |||||||||||||    
T  132062 aatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggagtgcaaaatgtaaggactaaatacatatttaaccc 132150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 26741294 - 26741391
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| ||||||||||||||| ||||||||||||    ||||||| || |||||||||||||||||||| ||||| ||||| ||| ||||||||||||||    
T  26741294 ataacagagataaaatgtgaggattttaaaaaca----atgaaatgtaaagactattcttcaaaggggcgcaaaacgtaaggacttaaaacatatttaac 26741389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 51755904 - 51755968
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaag 67  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  51755904 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaag 51755968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 43933718 - 43933816
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||  ||||||||||| |||||| || | |||||||| || ||||||||||||||||||    
T  43933718 ataacagagataaaatatgaggattttaaaaacatttaatgaaa-gtagagactatttttcaaatggacgcaaaatgtgaggactaaaaacatatttaac 43933816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 45728335 - 45728408
Alignment:
Q  31 aaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||| |||||||||||| ||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  45728335 aaaatatttaatgaaatgtatggactattcttcaaagggacacaaaatgtaaggactaaaaacatatttaaccc 45728408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 50732325 - 50732229
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattt 99  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||| ||  ||||||| |||||||| || ||||||||||| |  ||||||||||||    
T  50732325 ataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatttttcaaaggagcgcaaaatgtaaggataaaaaacatattt 50732229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 50780530 - 50780626
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattt 99  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||| ||  ||||||| |||||||| || ||||||||||| |  ||||||||||||    
T  50780530 ataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatttttcaaaggagcgcaaaatgtaaggataaaaaacatattt 50780626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 38485796 - 38485699
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||||||| ||||||  || ||||||||||||| |||| |||| ||  ||||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  38485796 ataacggaga-aaaatgcaaggattttaaaaacatataataaaatgtatggactattcttcaaagaggcacaaaatgtaaggactaaaatcatatttaa 38485699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 22814597 - 22814672
Alignment:
Q  29 taaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||||||||||||||||| ||   |||||| ||||||| |||||||||| |||| ||||||||||||||||||||    
T  22814597 taaaaacatttaatgaaatgtatgaactatttttcaaagaggcacaaaatataagtactaaaaacatatttaaccc 22814672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 25770706 - 25770804
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||||||||||||| | |  |||||||||||||||||| |||| |||  ||||||||||||| | |  ||||||||||| | |||||||||||||||    
T  25770706 ataacggagataaaatataaatattttaaaaacatttaataaaatgtaggaactattcttcaaatgagtgcaaaatgtaaggattaaaaacatatttaa 25770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 34743469 - 34743563
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacccaa 106  Q
    |||||||||||| ||||| ||||||||||||||||| ||  ||  ||||||||||||| | |||| |||||| |||| | |||||||||||||||    
T  34743469 ataaaatgtgaggatttttaaaacatttaatgaaatgtaaggataattcttcaaagggacgcaaagtgtaaggactagatacatatttaacccaa 34743563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 27013509 - 27013412
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||||| || |||||||||||||||||| ||||  ||  |||||||||||    | | ||||||||||  ||||||||||||||||||    
T  27013509 ataacggagataaaatgtaaggattttaaaaacatttaataaaatgcaggaactattcttca----gactcaaaatgtaaagactaaaaacatatttaac 27013414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 48868599 - 48868678
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| ||| ||||||| |||||||  || ||||||||| | ||||| ||||||||||||||    
T  48868599 attttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaaccc 48868678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 33226934 - 33227011
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||| | |||||||| |||||||  ||||||| || ||||||||| | ||||| ||||||||||||    
T  33226934 attttaaaaacatttacttaaatatagggactatttatcaaaggagcgcaaaatgtagggactaagaacatatttaac 33227011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 46689780 - 46689681
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| |||||||| |||||   ||| |||||||| |||| ||||||||||||||||    
T  46689780 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcataaaatgtaggaaccaaaaacatatttaacc 46689682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 48867749 - 48867649
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||  |||||||| || |||||||||| ||||| |||||| ||| ||||||| || ||||  || ||||||||| | ||||| |||||||||||||    
T  48867749 taacggaagtaaaatgtaaggattttaaaaatatttattgaaatgtagggactattatttaaagtagcgcaaaatgtagggactaataacatatttaacc 48867650  T
Q  104 c 104  Q
    |    
T  48867649 c 48867649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 13637575 - 13637478
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||| ||||||||| |||  |||||||||| ||||||||||||  | |||||||| |||||||  || ||||||||||  | |||||||||||||||    
T  13637575 ataacgaagataaaatatgaagattttaaaaatatttaatgaaatgca-agactattattcaaagaagcgcaaaatgtaaagattaaaaacatatttaa 13637478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 25770572 - 25770494
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||||||||| |||||| || |||||||| ||||||    | ||||||||||| | |||||||||||||||||    
T  25770572 attttaaaaacatttattgaaatgtaaagactatttttcaaaatcacgcaaaatgtaaggattaaaaacatatttaacc 25770494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 54588555 - 54588493
Alignment:
Q  5 aacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaag 67  Q
    ||||||| ||||||||  |||||||||||||||||| |||||| ||  |||||||||||||||    
T  54588555 aacggaggtaaaatgtaggaattttaaaaacatttattgaaatgtatggactattcttcaaag 54588493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 2388730 - 2388673
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattct 61  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| |||||||||||||    
T  2388730 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactattct 2388673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 33225579 - 33225490
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||||||| | |||||||||||||||| | |||| ||| |||||||  ||||||| ||  ||||||||   |||||||||||||||||    
T  33225579 ataaaatgtggggattttaaaaacatttacttaaatgtagggactatttatcaaaggagcgtaaaatgtagagactaaaaacatatttaa 33225490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 22407265 - 22407364
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| ||||||| ||||||   || ||||||||| | || ||||||||||||||||    
T  22407265 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaacc 22407363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 34949854 - 34949755
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  34949854 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 34949756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 36899352 - 36899253
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  36899352 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 36899254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 45539631 - 45539730
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||| |||||||||| |||   ||  |||||||| | || ||||||||||||||||    
T  45539631 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctt-aaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 45539729  T

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Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 4199898 - 4199976
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| ||| |||||||| |||||   || ||||||||| | || |||||||||||||||||    
T  4199898 attttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 4199976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 3799800 - 3799722
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||||||||| | |||| |||||||||||  ||||| | ||  |||||||| | |||||||| ||||||||||    
T  3799800 attttaaaaacatttacttaaatgtagagactatttatcaaaagagcgtaaaatgtagggactaaaaagatatttaacc 3799722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 32837360 - 32837280
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacccaa 106  Q
    |||||||||||||||  |||||| | ||||||||| || || |  || ||||||||||| ||||| ||||||||||||||||    
T  32837360 attttaaaaacattttttgaaatgttgagactattttt-aacgttgcgcaaaatgtaaggactaataacatatttaacccaa 32837280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 42606378 - 42606321
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattct 61  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||| |||||||||    
T  42606378 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 42606321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 36899697 - 36899776
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccca 105  Q
    |||||||||||||||| |||||| ||| |||||||| |||||   ||| ||||| || | || ||||||||||||||||||    
T  36899697 attttaaaaacatttattgaaatgtagggactattc-tcaaaattgcataaaatatagggaccaaaaacatatttaaccca 36899776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 51507919 - 51508007
Alignment:
Q  13 taaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||||| || | |||||||||||||| | |||| |||  ||||||  ||||| | ||  |||||||||| |||||||||||||||||    
T  51507919 taaaatgtaaggactttaaaaacatttacttaaatgtaggaactatttatcaaaagagcgtaaaatgtaaggactaaaaacatatttaa 51508007  T

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Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 16662270 - 16662165
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattta 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||| |||| |||    
T  16662270 taataacagagataaaatgtgagaattttaaaaacatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtaagaactaaaatcataatta 16662171  T
Q  101 acccaa 106  Q
    ||||||    
T  16662170 acccaa 16662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 26243385 - 26243482
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattta 100  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| ||||||||||||||||    
T  26243385 ataatggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaaggagcgcaaaatataaggactaaaaacatattta 26243482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 10047578 - 10047478
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |||| ||||||||||| | ||||||||||||||||    
T  10047578 ataacggagataaaatgtgagaattttaaaaacatttaatg-aatgtagggactattcttcaaaagggcgcaaaatgtaaggattaaaaacatatttaac 10047480  T
Q  103 cc 104  Q
    ||    
T  10047479 cc 10047478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 13315302 - 13315199
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||| ||| |||||||||| ||| |||| ||||||||||| ||||||||||||||||||    
T  13315302 ataacagagataaaatgtgatgattttaaaaacatttaatgaaatgtagggactattctttaaatgggcgcaaaatgtaaggactaaaaacatatttaac 13315203  T
Q  103 ccaa 106  Q
    ||||    
T  13315202 ccaa 13315199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 26997859 - 26997960
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| |||||||||| | |||||||||| ||  |||||||||||||| || | ||||||||||||||||||||||||||||||    
T  26997859 ataacggagataaaatgtgaggattttaaaaataattaatgaaatgtatggactattcttcaaatggacgcaaaatgtaagaactaaaaacatatttaac 26997958  T
Q  103 cc 104  Q
    ||    
T  26997959 cc 26997960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 6297562 - 6297463
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||| |||  |||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  6297562 ataacagagagaaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaaggggcgcaaaatgtaaggactaaagacatatttaac 6297463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 6298025 - 6298126
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||| |||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||   ||||||||||| |||||||||| |||||||    
T  6298025 ataacggaaataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagggaagcaaaatgtaagcactaaaaacacatttaac 6298124  T
Q  103 cc 104  Q
    ||    
T  6298125 cc 6298126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 9800139 - 9800031
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||| ||  || |||||||||||| ||| |||||| |||| ||||||||||||||||||    
T  9800139 ataacggagatgaaatgtgaggattttaaaaacatttaataaaatgtaaggattattcttcaaagaggcgcaaaatctaaggactaaaaacatatttaac 9800040  T
Q  103 ccaacaaaa 111  Q
    |||| ||||    
T  9800039 ccaaaaaaa 9800031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 21006112 - 21006212
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| |||||||||||  |||||||||| | || |||||||||||||    
T  21006112 ataacggagataaaatgtgaggattttaaaaacatttaataaaatgtagggactatttttcaaaggggccaaaaatgtaaggagtataaacatatttaac 21006211  T
Q  103 c 103  Q
    |    
T  21006212 c 21006212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 9800333 - 9800432
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| ||||||||||| || ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||| || ||||| |||||||||    
T  9800333 ataacgaagataaaatgtaaggattttaaaaacatttaatgaaatatatggactattcttcaaaggggcgcaaaatgcaaggaccaaaaatatatttaac 9800432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 17915497 - 17915599
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| ||||||||||||||| |||| ||||||||||||| |||| ||  || ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  17915497 ataacagagataaaatgtgaggatttaaaaaacatttaataaaatgtaagga-tattcttcaaaggagcacaaaatgtaaggactaaaaacatatttaac 17915595  T
Q  103 ccaa 106  Q
    ||||    
T  17915596 ccaa 17915599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 17914297 - 17914196
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||||| | | ||||||||||  ||| ||||||||||||||    
T  17914297 ataacagagataaaatgtgaggattttaaaaacatttaataaaatgtagggactattcttcaaagagacgcaaaatgtaaagacttaaaacatatttaac 17914198  T
Q  103 cc 104  Q
    ||    
T  17914197 cc 17914196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 7344846 - 7344946
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||| ||||||| |||| ||||||||||||| |||| |||| ||  || |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  7344846 ataacggacataaaatatgaggattttaaaaacatataataaaatgtatggattattcttcaaaggggcacaaaatgtaaggactaaaaacatatataac 7344945  T
Q  103 c 103  Q
    |    
T  7344946 c 7344946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 16662464 - 16662558
Alignment:
Q  5 aacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattta 100  Q
    |||||||||||| | |||||||||||||||||||||||||||| |||  ||||||||||||| | || ||||||||||| ||||||||||||||||    
T  16662464 aacggagataaa-tatgagaattttaaaaacatttaatgaaatgtaggaactattcttcaaaagagcgcaaaatgtaaggactaaaaacatattta 16662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 10047868 - 10047971
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||| ||| ||||||||||| ||||||||| ||||| ||||||||||||||||| |   |||||||||| | |||||| ||||||||     
T  10047868 ataacggagataaaatatgaaaattttaaaaatatttaatgatatataaagactattcttcaaaggagtggaaaatgtaaggattaaaaatatatttaag 10047967  T
Q  103 ccaa 106  Q
    ||||    
T  10047968 ccaa 10047971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 6297852 - 6297945
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacata 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||   | ||||||||| | || |||||||||    
T  6297852 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacgaaaaacata 6297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 26720420 - 26720323
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||| |||| |||||||  | |||||||||| |||||||||||| ||| |||||||||||||||| || ||||||||| | |||||||| ||||||||    
T  26720420 taacagagaaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtagggactaaaaatatatttaa 26720323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 12489517 - 12489616
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| |||||||||||| || |||||||||||||| |||||||| ||  |||||||||||| |  | | ||||||||||| ||||||||||||||||||    
T  12489517 ataacagagataaaatgtaaggattttaaaaacatt-aatgaaatgtaaggactattcttcataacgacgcaaaatgtaaggactaaaaacatatttaac 12489615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 44803562 - 44803654
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||||||||||| |||| | |||| ||| |||||||  ||||||| || ||||||||| | |||||| |||||||||||||    
T  44803562 ataaaatgtgagaattttaaaaacttttacttaaatgtagggactatttatcaaaggagcgcaaaatgtagggactaaacacatatttaaccc 44803654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 44148677 - 44148578
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||  |||||||||| ||||||||||| |||| | |||| ||| |||||||||||||| | ||  |||||||| | ||||||||||||||||||    
T  44148677 ataacggagtaaaaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaaagagcgtaaaatgtagggactaaaaacatatttaac 44148578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 36155371 - 36155268
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||  ||||||| || |||||||||||||||| | |||| ||| ||||||| |||||||  |||||||||||| | || || | ||||||||||    
T  36155371 ataacggagtaaaaatgtaaggattttaaaaacatttattaaaatgtagggactattattcaaagtcgcacaaaatgtagggaccaatagcatatttaac 36155272  T
Q  103 ccaa 106  Q
    ||||    
T  36155271 ccaa 36155268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 12489321 - 12489265
Alignment:
Q  10 agataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaa 66  Q
    |||||||||| ||| |||||||||| |||||||||||| ||| ||||||||||||||    
T  12489321 agataaaatgcgaggattttaaaaatatttaatgaaatgtagggactattcttcaaa 12489265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 36156358 - 36156450
Alignment:
Q  13 taaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaa-gaactaaaaacatatttaaccc 104  Q
    |||||||| || |||||||||||||||| ||||||  | |||||||| |||||||  ||| ||||| ||| |||| |||||||||||||||||    
T  36156358 taaaatgtaaggattttaaaaacatttattgaaatgcaaagactattattcaaagtcgcataaaatataaggaaccaaaaacatatttaaccc 36156450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 4624611 - 4624532
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| || ||||||||||||||||     |||||| |||| || |||||||||||||||||    
T  4624611 attttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaaccc 4624532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 44024325 - 44024230
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatt 98  Q
    ||||||| ||||||||||||  |||||||||||||||  |||||| ||  |||||||||||||| | |  |||||| |||| |||||||| |||||    
T  44024325 ataacggggataaaatgtgatgattttaaaaacatttggtgaaatgtatggactattcttcaaatgagtgcaaaatttaaggactaaaaatatatt 44024230  T

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Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 11089295 - 11089385
Alignment:
Q  14 aaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||| |||| |||||||||| |||||| ||||| ||  || ||||||| ||||| ||  ||||| ||||||||||||||||| |||||||    
T  11089295 aaaatatgaggattttaaaaatatttaacgaaatgtaatgattattctttaaaggagcgaaaaatctaagaactaaaaacatacttaaccc 11089385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 40304775 - 40304682
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccca 105  Q
    |||||||||||| |||||||||| ||||| | |||| ||  |||||||  ||||||| |  ||||||||| | |||||||| ||||||||||||    
T  40304775 ataaaatgtgaggattttaaaaatatttacttaaatgtatggactatttatcaaaggagtgcaaaatgtagggactaaaaatatatttaaccca 40304682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 16682620 - 16682533
Alignment:
Q  14 aaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    ||||||| ||||||||||||||||||  |||||| ||  |||||||||| ||||  || |||||| |||  || ||||||||||||||    
T  16682620 aaaatgtaagaattttaaaaacattttttgaaatgtaatgactattctttaaagtcgcgcaaaatataatgaccaaaaacatatttaa 16682533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 4624459 - 4624349
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| || |||| |||  ||||||| |   |||||||| | || ||||||||||||||||    
T  4624459 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaagacgatttgtcaaaggagggaaaaatgtaggcaccaaaaacatatttaacc 4624360  T
Q  104 caacaaaatat 114  Q
    | | |||||||    
T  4624359 ctataaaatat 4624349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 21005961 - 21006039
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||||||||| |||||| ||  ||||||| |||||||   | ||||||||| | || ||||||||||||||||    
T  21005961 attttaaaaacatttattgaaatgtaaggactatttttcaaagccacgcaaaatgtagggaccaaaaacatatttaacc 21006039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 44024476 - 44024398
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||| ||||| |||||| ||  ||||||| |||||||   | ||||||||||| || ||||||||||||||||    
T  44024476 attttaaaaatatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaacc 44024398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 29917203 - 29917146
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattct 61  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||| |||||||||    
T  29917203 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 29917146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 45369131 - 45369200
Alignment:
Q  22 agaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaa 91  Q
    ||||||||||||||||||| |||||| ||  || |||| || ||||| ||||||||| |||| |||||||    
T  45369131 agaattttaaaaacatttattgaaatgtaaggattattttttaaaggagcacaaaatataaggactaaaa 45369200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 1737460 - 1737432
Alignment:
Q  83 gaactaaaaacatatttaacccaacaaaa 111  Q
    |||||||||||||||||||||||||||||    
T  1737460 gaactaaaaacatatttaacccaacaaaa 1737432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 12734271 - 12734172
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||| ||| | |||||| ||| ||||||||| ||||   || ||||||||| | || ||||||||||||||||    
T  12734271 taacggagaaaaaatgtagggattttaaaaatattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 12734173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 22601588 - 22601540
Alignment:
Q  13 taaaatgtgagaattttaaaaacatttaatgaaatatagagactattct 61  Q
    |||||||| ||||||||||||||||||| | |||| ||| |||||||||    
T  22601588 taaaatgtaagaattttaaaaacatttatttaaatgtagggactattct 22601540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 39234936 - 39234892
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaat 47  Q
    ||||| ||||||||||||||||||||| |||| ||||||| ||||    
T  39234936 ataactgagataaaatgtgagaatttttaaaatatttaataaaat 39234892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 44802272 - 44802181
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||| |||||||||||| ||| | |||| ||  |||||||  ||||| | || ||||||||  | ||||||||||||||||||||    
T  44802272 ataaaatgtgaggattttaaaaaca-ttacttaaatgtatggactatttatcaaatgagcgcaaaatgttgggactaaaaacatatttaaccc 44802181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 2191317 - 2191217
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  2191317 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 2191218  T
Q  103 c 103  Q
    |    
T  2191217 c 2191217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 21182407 - 21182304
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| |||||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21182407 ataacagagataaaatgtgaaaattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 21182308  T
Q  103 ccaa 106  Q
    ||||    
T  21182307 ccaa 21182304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 21265090 - 21264988
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  21265090 taacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaacc 21264991  T
Q  104 caa 106  Q
    |||    
T  21264990 caa 21264988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 21217312 - 21217417
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  21217312 taacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaacc 21217411  T
Q  104 caacaa 109  Q
    | ||||    
T  21217412 ctacaa 21217417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 3691379 - 3691481
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||  ||| ||||||||||||||||||    
T  3691379 ataacggagataaaatgtgaagattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaaatacaaggactaaaaacatatttaac 3691478  T
Q  103 cca 105  Q
    |||    
T  3691479 cca 3691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 21217018 - 21216920
Alignment:
Q  8 ggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacccaa 106  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  21217018 ggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaacccaa 21216920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 21265384 - 21265482
Alignment:
Q  8 ggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacccaa 106  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  21265384 ggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaacccaa 21265482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 2517513 - 2517412
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| | | ||||||||||| |||||||| |||||||||    
T  2517513 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacgcaaaatgtaaggactaaaaatatatttaac 2517414  T
Q  103 cc 104  Q
    ||    
T  2517413 cc 2517412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 24093256 - 24093155
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| ||| || ||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  24093256 ataacgaagagaagatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaagtgtaaggactaaaaacatatttaac 24093157  T
Q  103 cc 104  Q
    ||    
T  24093156 cc 24093155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 10706641 - 10706724
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaacta 88  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||| ||||    
T  10706641 ataacggagataaaatgtgaggattttaaaaatatttaatgaaatat--agactattcttcaaaggggcgcaaaatgtaaggacta 10706724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 39729596 - 39729697
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||  | | |||||| |||| ||||||||| || |||||    
T  39729596 ataacggagataaaatgtgaggattttaaaaatatttaatgaaatataaagactattcttcaaactgacgcaaaatataaggactaaaaacgtaattaac 39729695  T
Q  103 cc 104  Q
    ||    
T  39729696 cc 39729697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 21267367 - 21267459
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||||||  |  |||||||||| ||||||||||||||||||||    
T  21267367 ataaaatgtgaggatttttaaaacatttaatgaaatgtagggactattcttcaaaggatcgaaaaatgtaaggactaaaaacatatttaaccc 21267459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 32860911 - 32860811
Alignment:
Q  6 acggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccca 105  Q
    ||||||||||||||| || ||||||||||||||||||||||||||  ||||||| ||||||||| | |||||| |||   ||||||||||||||||||||    
T  32860911 acggagataaaatgttaggattttaaaaacatttaatgaaatataacgactatttttcaaagggacgcaaaatataaaggctaaaaacatatttaaccca 32860812  T
Q  106 a 106  Q
    |    
T  32860811 a 32860811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 3691183 - 3691094
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaa 92  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||| |||| |||||| |||| ||||||||    
T  3691183 ataacggtgataaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaaagggcgcaaaatataaggactaaaaa 3691094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 7083622 - 7083525
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattta 100  Q
    |||| |||||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||| || |  |||||||||| | ||||||||||||||    
T  7083622 ataagggagataaaatgtgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaatggacgtaaaatgtaaggattaaaaacatattta 7083525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 32114259 - 32114163
Alignment:
Q  9 gagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacccaa 106  Q
    ||||||||||||||| ||||||||||||||||||  | | ||| |||||||||||||| ||||  |||||||||| ||||||||||||||||||||||    
T  32114259 gagataaaatgtgaggattttaaaaacatttaatagattgtagggactattcttcaaa-gggcgtaaaatgtaaggactaaaaacatatttaacccaa 32114163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 32114461 - 32114562
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||| ||  ||||||||||  ||| ||| ||||||||||| |||||||| |||||||||    
T  32114461 ataacagagataaagtgtgagaattttaaaaatatttaatgaaatgtaaggactattctttgaagaggcgcaaaatgtaaggactaaaaatatatttaac 32114560  T
Q  103 cc 104  Q
    ||    
T  32114561 cc 32114562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 24093546 - 24093644
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||||||||||||||||| || |||||||||||||||||| ||||||||  ||||||||||||| |||  |||||||||||   |||||| ||||||||    
T  24093546 ataacggagataaaatgtaaggattttaaaaacatttaataaaatataggcactattcttcaaatgggtgcaaaatgtaagggttaaaaagatatttaa 24093644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 3624914 - 3625005
Alignment:
Q  13 taaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccca 105  Q
    |||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||     ||||||||||||||  |||||||||||||||||    
T  3624914 taaaatgt-agaattttaaaaacatttattgaaatgtagggactattcttcaaagtccgtcaaaatgtaagaaccgaaaacatatttaaccca 3625005  T

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Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 23222854 - 23222954
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||| | |||||||||| ||||||||||||| || |||||| ||  ||||||| || ||||  || ||||||||| | |||||||||||||||||||    
T  23222854 taacggaaagaaaatgtgaggattttaaaaacatatattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaacc 23222953  T
Q  104 c 104  Q
    |    
T  23222954 c 23222954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 2606650 - 2606690
Alignment:
Q  7 cggagataaaatgtgagaattttaaaaacatttaatgaaat 47  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  2606650 cggagataaaatatgagaattttaaaaacatttaatgaaat 2606690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 39600851 - 39600771
Alignment:
Q  24 aattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||| | ||||||||||||||| || |||||||||||  ||| | | ||||||||||| | ||||||||||||||||||    
T  39600851 aattttgataacatttaatgaaatgtaaagactattctttcaagagacgcaaaatgtaaggattaaaaacatatttaaccc 39600771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 39096622 - 39096521
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||  |||||||| |||||   ||||||||| || | || ||||||||||||||||    
T  39096622 taacggagaaaaaatgtatggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgcacaaaatatagggaccaaaaacatatttaacc 39096524  T
Q  104 caa 106  Q
    |||    
T  39096523 caa 39096521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 3854489 - 3854589
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  3854489 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 3854587  T
Q  104 ca 105  Q
    ||    
T  3854588 ca 3854589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 32861052 - 32861129
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||| |||||||||  ||||||| |||||||   ||||||||| | | || |||||||||||||||    
T  32861052 attttaaaaacatttattgaaatataaggactatttttcaaagtcacacaaaatgcagggaccaaaaacatatttaac 32861129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 26525886 - 26525984
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| ||| |||  | |||||||||||||||| |||||||||| |||||||  |||||   || ||||||||| | || ||||||||||||||||    
T  26525886 taacggagaaaaattgtagggattttaaaaacatttattgaaatatagggactatt-atcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 26525984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 39947098 - 39947177
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| ||  ||||||| |||||||   | ||||||||| | || |||||||||||||||||    
T  39947098 attttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgtagggaccaaaaacatatttaaccc 39947177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 10708112 - 10708022
Alignment:
Q  14 aaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||  |||||||||||||||||| |||||| ||  |||||||  ||||| | |  ||||||||| | || |||||||||||||||||    
T  10708112 aaaatgtaggaattttaaaaacatttattgaaatgtaaggactatttgtcaaaagagggcaaaatgtagggaccaaaaacatatttaaccc 10708022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 1804654 - 1804753
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  1804654 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 1804752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 2035707 - 2035607
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||||||||||  | |||||||||||||||| | |||| ||| || ||||||| ||| | |   ||||| || | || ||||||||||||||||    
T  2035707 taacggagataaaatgtagggattttaaaaacatttattaaaatgtagggattattctttaaaagagggtaaaatatagggaccaaaaacatatttaacc 2035608  T
Q  104 c 104  Q
    |    
T  2035607 c 2035607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 6476185 - 6476086
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  6476185 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 6476087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 11451178 - 11451277
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  11451178 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 11451276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 12090117 - 12090216
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| |||||||| |||||   || ||||||| | | || ||||||||||||||||    
T  12090117 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgcagggaccaaaaacatatttaacc 12090215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 113
Target Start/End: Original strand, 23787937 - 23787965
Alignment:
Q  85 actaaaaacatatttaacccaacaaaata 113  Q
    |||||||||||||||||||||||||||||    
T  23787937 actaaaaacatatttaacccaacaaaata 23787965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 27377747 - 27377648
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  27377747 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 27377649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 5e-34; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 5172845 - 5172744
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||    
T  5172845 ataacgtagataaaatgtaaggattttaaaaacatttaatgaaatgtagagactattcttcaaatgagcgcaaaatgtaagaactaaaaacatatttaac 5172746  T
Q  103 cc 104  Q
    ||    
T  5172745 cc 5172744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 31436373 - 31436474
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||    
T  31436373 ataacggagataaaatgtgataattttaaaaacatttaataaaatatagtgactattcttcaaaaggacacaaaatgtaaggactaaaatcatatttaac 31436472  T
Q  103 cc 104  Q
    ||    
T  31436473 cc 31436474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 9880780 - 9880880
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| | || ||||||||||||| ||||||||||||||||    
T  9880780 ataacagagataaaatgtgagaattttaaaaacatttaataaaatatagaaactattcttcaaatgagcgcaaaatgtaagaattaaaaacatatttaac 9880879  T
Q  103 c 103  Q
    |    
T  9880880 c 9880880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 9880584 - 9880483
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||   ||||||||||| ||||||||||||||||||    
T  9880584 ataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtagagacttttcttcaaagggatgcaaaatgtaaggactaaaaacatatttaac 9880485  T
Q  103 cc 104  Q
    ||    
T  9880484 cc 9880483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 18179979 - 18179878
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||  ||||||| ||||||||||  ||||||||||| ||||||||||| ||||||    
T  18179979 ataacggagataaaatgtgaggattttaaaaacaattaatgaaatataaggactatttttcaaaggggtgcaaaatgtaaggactaaaaacatgtttaac 18179880  T
Q  103 cc 104  Q
    ||    
T  18179879 cc 18179878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 47541609 - 47541527
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaaca 94  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||||||    
T  47541609 ataaaatgtgaggattttaaaaacatttaatgaaatatagggactattcttcaaagggacataaaatgtaaggactaaaaaca 47541527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 19895500 - 19895399
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||||||||  ||||||||||||||||| |||| ||  |||||||||||||| | ||| |||||||||| ||||||||||||||||||    
T  19895500 ataacggagataaaatgtgagggttttaaaaacatttaattaaatgtatggactattcttcaaacgagcataaaatgtaaggactaaaaacatatttaac 19895401  T
Q  103 cc 104  Q
    ||    
T  19895400 cc 19895399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 50359429 - 50359530
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| |  |||||||||||||| |||| ||||||||||| | || |||||||||||||    
T  50359429 ataacagagataaaatgtgaggattttaaaaacatttaatgaaataaaaggactattcttcaaatgggcgcaaaatgtaaggaatataaacatatttaac 50359528  T
Q  103 cc 104  Q
    ||    
T  50359529 cc 50359530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 3591327 - 3591435
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||| |||||||||||||||| |||||||||||||||||| |||| ||  |||||||||||||| | || ||||||||||| |||||||| |||||||||    
T  3591327 ataatggagataaaatgtgaggattttaaaaacatttaataaaatgtatggactattcttcaaatgagcgcaaaatgtaaggactaaaaatatatttaac 3591426  T
Q  103 ccaacaaaa 111  Q
    |||| ||||    
T  3591427 ccaaaaaaa 3591435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 6751147 - 6751044
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||| ||  ||||| ||||||||||||||||||||  || |||||||||||| ||||||||||||||  |||||| ||||||||||     
T  6751147 ataacggagataaaatgcgatgatttttaaaacatttaatgaaatataaggattattcttcaaagaggcacaaaatgtaaagactaaacacatatttaat 6751048  T
Q  103 ccaa 106  Q
    ||||    
T  6751047 ccaa 6751044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 5683254 - 5683161
Alignment:
Q  10 agataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||||||| |||||||| |||||||||||||| ||| ||||||| ||||||| | | ||||||||||| | |||||||||||||||||    
T  5683254 agataaaatgtgaggattttaaatacatttaatgaaatgtagggactatttttcaaagagacgcaaaatgtaaggattaaaaacatatttaacc 5683161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 18180268 - 18180369
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||| |||| |||||||||||||||||| |||| ||  ||||||||||||||| ||| |||||| |||  | ||||||||||||||||    
T  18180268 ataacggagataaaatatgaggattttaaaaacatttaataaaatgtatggactattcttcaaagtggcgcaaaatataaagattaaaaacatatttaac 18180367  T
Q  103 cc 104  Q
    ||    
T  18180368 cc 18180369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 4288430 - 4288525
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| | |||||||||||| |||||||||||||||||||     ||| ||||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  4288430 ataacgaatataaaatgtgaggattttaaaaacatttaatg-----tagggactattcttcaaaggggcgcaaaatataaggactaaaaacatatttaac 4288524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 48155276 - 48155368
Alignment:
Q  10 agataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||  |||||||||||||||||||||||||||  || |||||||||||| || |||||| |||| | ||||||||||||||||    
T  48155276 agataaaatgtgaagattttaaaaacatttaatgaaatataggaacaattcttcaaaggagcgcaaaatataaggattaaaaacatatttaac 48155368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 50359225 - 50359122
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||| |||||||||||  |||| |||||||||||||||||| ||| ||||||||||| ||  ||| |||||| |||| |||||||| |||||||||    
T  50359225 ataacggaaataaaatgtgaagatttaaaaaacatttaatgaaatgtagggactattcttcgaattggcgcaaaatataaggactaaaaaaatatttaac 50359126  T
Q  103 ccaa 106  Q
    ||||    
T  50359125 ccaa 50359122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 45664787 - 45664686
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||  |||||||| | |||||||||||||||| | |||| |||||||||||||||||| | ||  |||||||| | ||||||||||||||||||    
T  45664787 ataacggagtaaaaatgtggggattttaaaaacatttattaaaatgtagagactattcttcaaatgagcgtaaaatgtagggactaaaaacatatttaac 45664688  T
Q  103 cc 104  Q
    ||    
T  45664687 cc 45664686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 1500993 - 1501072
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||||||||||||||||||||| ||| |||||||||||||| | || |||||| || | ||||||||||||||||||||    
T  1500993 attttaaaaacatttaatgaaatgtagggactattcttcaaaagagcgcaaaatatagggactaaaaacatatttaaccc 1501072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 19895790 - 19895853
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaa 66  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  19895790 ataacgaagataaaatatgagaattttaaaaacatttaataaaatgtagagactattcttcaaa 19895853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 5683555 - 5683652
Alignment:
Q  7 cggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||||||||||  ||| |||||||||| |||||||||||| ||| ||||||||||||||  | |  ||||| |||| ||||||||||||||||||||    
T  5683555 cggagataaaatacgaggattttaaaaatatttaatgaaatgtagggactattcttcaaaaagacgtaaaatataaggactaaaaacatatttaaccc 5683652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 19976258 - 19976166
Alignment:
Q  9 gagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    ||||||||||||| | |||||||||||||||||| ||| |||   ||||||||||||||  || ||||||||||  |||||||||||||||||    
T  19976258 gagataaaatgtggggattttaaaaacatttaataaaaaataagaactattcttcaaagaagcgcaaaatgtaacgactaaaaacatatttaa 19976166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 6751350 - 6751445
Alignment:
Q  10 agataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggc-acaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||| |||||||||| |||||||||||| ||  |||| ||||| |||||| |  ||||||||||  ||||||||||||||||||||    
T  6751350 agataaaatgtgaggattttaaaaaaatttaatgaaatgtaaggacttttctttaaagggacgccaaaatgtaatgactaaaaacatatttaaccc 6751445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 48155069 - 48154974
Alignment:
Q  7 cggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||||| |||| |||||||||||||||||| |||| ||  |||||||||| |||| |||  ||||| |||| | |||||||||||||||||    
T  48155069 cggagataaaatatgaggattttaaaaacatttaataaaatgtaaggactattctt-aaagcggcgtaaaatataaggattaaaaacatatttaacc 48154974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 36793586 - 36793665
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| | |||| |||||||||||||||||||   | |||||| || | ||||||||||||||||||||    
T  36793586 attttaaaaacatttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggactaaaaacatatttaaccc 36793665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 42723246 - 42723350
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacattt----aatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattt 99  Q
    ||||||| |||||||||||| |||||||||||||||    ||| |||||||   | ||||||| ||||| || |||||| |||| | |||||||||||||    
T  42723246 taacggatataaaatgtgaggattttaaaaacatttaataaattaaatatatgaattattctttaaaggagcgcaaaatataaggattaaaaacatattt 42723345  T
Q  100 aaccc 104  Q
    |||||    
T  42723346 aaccc 42723350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 9123128 - 9123205
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||||||||| |||||| |||||||||||| |||||   ||| |||||||| | || ||||||||||||||||    
T  9123128 attttaaaaacatttattgaaatgtagagactattc-tcaaaattgcataaaatgtagggaccaaaaacatatttaacc 9123205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 47410845 - 47410946
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  47410845 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 47410943  T
Q  104 caa 106  Q
    |||    
T  47410944 caa 47410946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 47541814 - 47541851
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacattta 40  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  47541814 ataacggagataaaatgtgaggattttaaaaacattta 47541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 17968135 - 17968036
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  17968135 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 17968037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 47542048 - 47542109
Alignment:
Q  38 ttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||||||| ||||||||||||    ||| |||||| |||| |||||||||||||||||||    
T  47542048 ttaatgaaatatagggactattcttca----ggcgcaaaatataaggactaaaaacatatttaacc 47542109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 12869666 - 12869745
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| ||| |||||||||| ||||| |   ||||| || | || |||||||||||||||||    
T  12869666 attttaaaaacatttattgaaatgtagggactattctttaaaggagggtaaaatatagggaccaaaaacatatttaaccc 12869745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 19976461 - 19976520
Alignment:
Q  40 aatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattt 99  Q
    ||||||||||||  |||||||||||||| | ||||||||||||  |||| ||||||||||    
T  19976461 aatgaaatataggaactattcttcaaagagacacaaaatgtaaagactacaaacatattt 19976520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 37927593 - 37927519
Alignment:
Q  30 aaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||| ||||||| |||| |||||||||||||||||  | ||  ||||| |||  ||||||||||||||||||||    
T  37927593 aaaaatatttaatcaaatgtagagactattcttcaatagagcgtaaaatataaagactaaaaacatatttaaccc 37927519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 36792312 - 36792239
Alignment:
Q  31 aaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||| |||||||||| || ||||||| |||    | ||||||||| ||||| ||||||||||||||||    
T  36792312 aaaacatttattgaaatatagggattattcttgaaaatcacgcaaaatgtaggaacttaaaacatatttaaccc 36792239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 32266581 - 32266482
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  32266581 taacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 32266483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 45230552 - 45230651
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| ||||| |  | |||||||||||||| | |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  45230552 taacggagaaaaaatatagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 45230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 7645972 - 7646071
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| ||  |||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  7645972 ataacggagataaaatgtgagaatttttaaaacatttattgaaatgtaaggactattcttcaaaggagcacaaaatgtaaggactaaaaacatatttaac 7646071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 5974113 - 5974010
Alignment:
Q  1 taataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatattta 100  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||| ||||||||||||||||    
T  5974113 taataacggaaataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaaacatattta 5974014  T
Q  101 accc 104  Q
    ||||    
T  5974013 accc 5974010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 21113129 - 21113042
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaa 90  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||||||||||| ||||||    
T  21113129 ataaaggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattcttcaatagggcgcaaaatgtaaggactaaa 21113042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 211530 - 211440
Alignment:
Q  14 aaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||| ||||||||| ||||||||||||| ||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  211530 aaaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaaccc 211440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 17157640 - 17157547
Alignment:
Q  9 gagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||| |||||||||| |||||||||||| ||  ||||||||||||| | |||  |||||||||||||||||||||||||||||    
T  17157640 gagataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaatgaggcgtaaaatgtaagaactaaaaacatatttaac 17157547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 1869551 - 1869443
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||| | |||| || |||| ||   | |||||||| ||||||||||||||||||    
T  1869551 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaattattttttaaagtggtgtagaatgtaaggactaaaaacatatttaac 1869452  T
Q  103 ccaacaaaa 111  Q
    |||| ||||    
T  1869451 ccaaaaaaa 1869443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 8710339 - 8710431
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||| | ||||||||||||||||||||||| ||  ||||||||||||||||||  |||||| |||| ||||||||||||||||||||    
T  8710339 ataaaatgtggggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaaccc 8710431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 4510289 - 4510187
Alignment:
Q  3 ataacggagataaaatgtg-agaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    ||||| |||||||||| || || ||||||||||||||||||||||| ||| ||||||||||||||  |||  |||||||||| |||||||||||||||||    
T  4510289 ataaccgagataaaatatggaggattttaaaaacatttaatgaaatgtagggactattcttcaaataggcgtaaaatgtaaggactaaaaacatatttaa 4510190  T
Q  102 ccc 104  Q
    |||    
T  4510189 ccc 4510187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 14712996 - 14713095
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| |||||||||| |||| ||||  ||||||||||||||||| ||  |||||||||||||| | || ||||||||||||| ||||||||||||||||    
T  14712996 ataacagagataaaatatgagcatttctaaaacatttaatgaaatgtaaggactattcttcaaaagagcgcaaaatgtaagaattaaaaacatatttaac 14713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 17157856 - 17157926
Alignment:
Q  36 atttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacccaa 106  Q
    |||||||||||| ||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  17157856 atttaatgaaatgtagggactattcttcaaagtggcgcaaaatgtaaggactaaaaacatatttaacccaa 17157926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 211710 - 211811
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaac-atttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    |||| |||||||||||||||  ||||||||||  |||||||||||| ||| ||||||||||||||  ||| ||||||||||| | |||||||||||||||    
T  211710 ataatggagataaaatgtgaagattttaaaaaatatttaatgaaatgtagggactattcttcaaataggcgcaaaatgtaaggattaaaaacatatttaa 211809  T
Q  102 cc 103  Q
    ||    
T  211810 cc 211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 25932375 - 25932476
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactat---tcttcaaaggggcacaaaatgtaagaactaaaaacatattt 99  Q
    ||||||||||||||||||||||||||||| |||||| || ||||| ||| ||||||   ||||||||  ||  |||||| |||| |||||||||||||||    
T  25932375 ataacggagataaaatgtgagaattttaataacattgaacgaaatgtagtgactattaatcttcaaaatggtgcaaaatataaggactaaaaacatattt 25932474  T
Q  100 aa 101  Q
    ||    
T  25932475 aa 25932476  T

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Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 6162679 - 6162776
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| |||||||||||| |||||   || ||||||||| | || |||||||||||||||    
T  6162679 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 6162776  T

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Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 14712757 - 14712659
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||| | ||||||| | || |||| ||||||||||||| |||||||| || |||||||||||| |||  |||||||||| ||| ||||||||||||||    
T  14712757 ataacgcatataaaatataaggatttaaaaaacatttaataaaatatag-gattattcttcaaagaggcgtaaaatgtaaggact-aaaacatatttaac 14712660  T

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Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 34984536 - 34984634
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| ||||||| || |||||||||||||||| |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  34984536 taacggagaaaaaatgt-aggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 34984633  T

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Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 20522168 - 20522246
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||| |||||| ||| ||||||||||||||   |  ||||||||| |||| |||||||||||||||||    
T  20522168 attttaaaaacatttattgaaatgtagggactattcttcaaaatcg-tcaaaatgtaggaaccaaaaacatatttaaccc 20522246  T

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Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 14712908 - 14712830
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||||||||||| |||||| ||  ||||||| ||||||| | | ||||||||| | || ||||||||||||||||    
T  14712908 attttaaaaacatttattgaaatgtaaggactatttttcaaagtgacgcaaaatgtagggaccaaaaacatatttaacc 14712830  T

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Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 5975909 - 5975833
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||| | |||| ||| ||||||||||||||| ||   ||||||| || ||||||||||||||||||    
T  5975909 attttaaaaacatttattaaaatgtag-gactattcttcaaagaggtggaaaatgtgaggactaaaaacatatttaac 5975833  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 14257245 - 14257146
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  14257245 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 14257147  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 19579193 - 19579293
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||| |||||||||| |  | |||||||||||||||| ||||||  ||||||||||||| |||  ||  ||||||||| | ||||| || ||||||||||    
T  19579193 taacagagataaaatatagggattttaaaaacatttattgaaatgcagagactattctttaaaaaggtgcaaaatgtatggactaataatatatttaacc 19579292  T
Q  104 c 104  Q
    |    
T  19579293 c 19579293  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 19595644 - 19595740
Alignment:
Q  8 ggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||||||||| |  | |||||||||| ||||| |||||| ||| |||||||||| |||  ||  ||||||||| | ||||| ||||||||||||||    
T  19595644 ggagataaaatatagggattttaaaaatatttattgaaatgtagggactattctttaaaaaggtgcaaaatgtatggactaataacatatttaaccc 19595740  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 25932179 - 25932082
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    |||||||||||||||||  || ||||||||||    |||||||||  || ||||||||||||||||    ||||||||||  |||||||| |||||||||    
T  25932179 ataacggagataaaatgcaaggattttaaaaa----taatgaaatgcagggactattcttcaaaggaaagcaaaatgtaaagactaaaaatatatttaac 25932084  T

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Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 33107352 - 33107451
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||| |||||||  | |||||||||||||| | |||||| ||| |||||||| |||||   || ||||||||| | || ||||||||||||||||    
T  33107352 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 33107450  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 20521263 - 20521184
Alignment:
Q  25 attttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    |||||||||||||||  |||||||||| ||||||||||| |||     ||||||||| | |||| |||||||||||||||    
T  20521263 attttaaaaacattttttgaaatatagggactattcttcgaagttcatcaaaatgtagggactacaaacatatttaaccc 20521184  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 22971799 - 22971771
Alignment:
Q  83 gaactaaaaacatatttaacccaacaaaa 111  Q
    |||||||||||||||||||||||||||||    
T  22971799 gaactaaaaacatatttaacccaacaaaa 22971771  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 23816599 - 23816627
Alignment:
Q  83 gaactaaaaacatatttaacccaacaaaa 111  Q
    |||||||||||||||||||||||||||||    
T  23816599 gaactaaaaacatatttaacccaacaaaa 23816627  T

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Target: scaffold0063 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 35182 - 35281
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||| ||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||    
T  35182 ataaccgagataaaatgtgaggattttaaaaacattcaataaaatgtagagactattcttcaaagggacgcaaaatgtaaggactaaaaacatatttaac 35281  T

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Target: scaffold0063; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 34892 - 34794
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| ||  ||| ||| ||||||  | | |||||| |||| |||||||||||||||||    
T  34892 ataacggagataaaatgtgagtactttaaaaacatttaatgaaatgtatggaccattattcaaatagacgcaaaatataaggactaaaaacatatttaa 34794  T

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Target: scaffold0009 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 107822 - 107720
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaac 102  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| ||| |||||||||||||||| || |||| ||||||  |||||||||||||||||    
T  107822 ataacggagataaaatgtgaggattttaaaaatatttattgaaatgtagggactattcttcaaaggagcgcaaagtgtaaggtctaaaaacatatttaac 107723  T
Q  103 cca 105  Q
    |||    
T  107722 cca 107720  T

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Target: scaffold0009; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 108112 - 108210
Alignment:
Q  3 ataacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaa 101  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||  |  |||||||||| |||| ||||||||||| |||||||||||||||||    
T  108112 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaggaataattcttcaaaagggcgcaaaatgtaaggactaaaaacatatttaa 108210  T

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Target: scaffold0933 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 582 - 490
Alignment:
Q  12 ataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaaccc 104  Q
    ||||||||||| |||||||||||||||||||||||| ||   || | || ||||| |  | |||||| |||||||||||||||||||||||||    
T  582 ataaaatgtgaaaattttaaaaacatttaatgaaatgtaagaacaactcgtcaaatgatcgcaaaatctaagaactaaaaacatatttaaccc 490  T

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Target: scaffold0177 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 25833 - 25933
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    |||||||  |||||||| |||| |||||||| ||||| | |||| ||| |||||||  ||||| | ||  |||||||| | |||||||||||||||||||    
T  25833 taacggaagtaaaatgtaagaactttaaaaatatttacttaaatgtagggactatttatcaaaagagcgtaaaatgtagggactaaaaacatatttaacc 25932  T
Q  104 c 104  Q
    |    
T  25933 c 25933  T

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Target: scaffold0085 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 39843 - 39942
Alignment:
Q  4 taacggagataaaatgtgagaattttaaaaacatttaatgaaatatagagactattcttcaaaggggcacaaaatgtaagaactaaaaacatatttaacc 103  Q
    ||||||||  ||||||| || |||||||||||||||| |||||| ||| ||||||||| ||||   ||  |||||||| | || ||||||||||||||||    
T  39843 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 39941  T

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