View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18211_low_11 (Length: 518)

Name: NF18211_low_11
Description: NF18211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18211_low_11
NF18211_low_11
[»] chr5 (17 HSPs)
chr5 (19-502)||(22415116-22415596)
chr5 (303-434)||(733880-734010)
chr5 (280-423)||(1681198-1681340)
chr5 (325-428)||(41454991-41455095)
chr5 (299-426)||(34872287-34872413)
chr5 (304-437)||(6367696-6367822)
chr5 (325-428)||(19402305-19402408)
chr5 (375-433)||(12264046-12264104)
chr5 (325-434)||(25495208-25495318)
chr5 (312-428)||(7591417-7591533)
chr5 (280-421)||(14652530-14652673)
chr5 (325-421)||(11402716-11402813)
chr5 (308-428)||(8150729-8150848)
chr5 (341-436)||(34881174-34881269)
chr5 (395-436)||(1014456-1014497)
chr5 (327-419)||(28224730-28224823)
chr5 (268-420)||(34969395-34969547)
[»] chr3 (24 HSPs)
chr3 (303-433)||(25858289-25858419)
chr3 (268-423)||(20038450-20038604)
chr3 (299-428)||(25089583-25089712)
chr3 (352-418)||(35143105-35143171)
chr3 (304-420)||(25465902-25466019)
chr3 (303-437)||(21238137-21238267)
chr3 (325-433)||(55467497-55467604)
chr3 (325-427)||(45915068-45915171)
chr3 (356-437)||(30739480-30739564)
chr3 (325-428)||(45629311-45629415)
chr3 (341-434)||(2566187-2566281)
chr3 (268-421)||(8557817-8557970)
chr3 (268-421)||(37045374-37045528)
chr3 (355-423)||(40484071-40484139)
chr3 (306-421)||(50578866-50578982)
chr3 (313-387)||(38680917-38680992)
chr3 (331-436)||(26758352-26758458)
chr3 (341-434)||(51194357-51194450)
chr3 (305-417)||(5640597-5640709)
chr3 (305-417)||(5671872-5671984)
chr3 (305-417)||(5681369-5681481)
chr3 (396-428)||(10481481-10481513)
chr3 (326-433)||(25919108-25919216)
chr3 (351-387)||(28792176-28792212)
[»] chr2 (13 HSPs)
chr2 (306-429)||(6946406-6946530)
chr2 (313-418)||(32646365-32646468)
chr2 (336-429)||(24725657-24725750)
chr2 (325-428)||(11678115-11678219)
chr2 (325-428)||(11695593-11695697)
chr2 (268-386)||(28790571-28790690)
chr2 (356-425)||(33426399-33426471)
chr2 (351-427)||(15698060-15698136)
chr2 (351-427)||(15698157-15698233)
chr2 (268-375)||(1331070-1331177)
chr2 (342-425)||(26316283-26316366)
chr2 (396-433)||(5862524-5862561)
chr2 (356-416)||(36075557-36075617)
[»] chr7 (19 HSPs)
chr7 (280-428)||(43908747-43908894)
chr7 (279-428)||(6879957-6880107)
chr7 (341-436)||(11834317-11834413)
chr7 (325-433)||(20334701-20334810)
chr7 (325-428)||(31287626-31287730)
chr7 (271-437)||(16359234-16359392)
chr7 (268-421)||(37375389-37375542)
chr7 (341-436)||(10338660-10338756)
chr7 (268-421)||(30079452-30079604)
chr7 (268-421)||(8118149-8118302)
chr7 (325-428)||(34751109-34751214)
chr7 (268-364)||(7685844-7685940)
chr7 (396-436)||(22298722-22298762)
chr7 (356-424)||(23706992-23707060)
chr7 (356-412)||(36875220-36875276)
chr7 (341-428)||(40398456-40398543)
chr7 (304-420)||(41459272-41459389)
chr7 (354-417)||(1812627-1812691)
chr7 (268-364)||(29628168-29628263)
[»] chr6 (10 HSPs)
chr6 (279-437)||(28610694-28610848)
chr6 (341-433)||(24644810-24644903)
chr6 (341-436)||(7169935-7170031)
chr6 (273-388)||(14564503-14564619)
chr6 (356-433)||(12147860-12147937)
chr6 (325-421)||(20500678-20500775)
chr6 (268-387)||(892233-892352)
chr6 (299-403)||(6266995-6267097)
chr6 (396-436)||(22413993-22414033)
chr6 (341-428)||(11417203-11417291)
[»] chr4 (17 HSPs)
chr4 (280-421)||(10778339-10778479)
chr4 (303-416)||(6101983-6102097)
chr4 (325-428)||(29232866-29232970)
chr4 (341-433)||(23625755-23625848)
chr4 (356-428)||(3349780-3349852)
chr4 (268-360)||(5122308-5122401)
chr4 (325-418)||(17794276-17794369)
chr4 (354-423)||(54273883-54273952)
chr4 (325-427)||(21069173-21069277)
chr4 (341-436)||(27743334-27743430)
chr4 (304-365)||(9058257-9058318)
chr4 (373-429)||(7764278-7764334)
chr4 (336-428)||(8484801-8484895)
chr4 (325-429)||(35233145-35233250)
chr4 (313-429)||(49640951-49641067)
chr4 (268-364)||(23120173-23120269)
chr4 (396-428)||(48653711-48653743)
[»] chr1 (26 HSPs)
chr1 (311-434)||(23474959-23475082)
chr1 (268-388)||(10847428-10847549)
chr1 (325-436)||(26344901-26345013)
chr1 (355-434)||(21905375-21905454)
chr1 (355-434)||(21907048-21907127)
chr1 (304-418)||(32910235-32910350)
chr1 (326-436)||(40095264-40095375)
chr1 (327-436)||(12973688-12973798)
chr1 (346-424)||(51231904-51231982)
chr1 (352-428)||(25865861-25865938)
chr1 (371-420)||(35375332-35375381)
chr1 (341-428)||(3935593-3935681)
chr1 (342-433)||(6248215-6248307)
chr1 (442-482)||(7562512-7562552)
chr1 (377-433)||(25507049-25507105)
chr1 (325-436)||(34914249-34914361)
chr1 (326-387)||(6694270-6694332)
chr1 (279-388)||(8268717-8268827)
chr1 (356-426)||(27770066-27770136)
chr1 (356-434)||(50310763-50310841)
chr1 (356-389)||(3860452-3860485)
chr1 (365-422)||(25532876-25532933)
chr1 (268-388)||(32937980-32938100)
chr1 (399-436)||(39158160-39158197)
chr1 (396-428)||(27350829-27350861)
chr1 (396-428)||(32937928-32937960)
[»] scaffold0059 (1 HSPs)
scaffold0059 (357-433)||(17790-17866)
[»] chr8 (12 HSPs)
chr8 (359-431)||(32063998-32064070)
chr8 (373-435)||(41346077-41346139)
chr8 (304-417)||(29914467-29914576)
chr8 (268-386)||(45366373-45366490)
chr8 (341-436)||(30253969-30254065)
chr8 (336-426)||(33566082-33566173)
chr8 (268-428)||(9012696-9012854)
chr8 (331-428)||(18755187-18755285)
chr8 (341-433)||(12193318-12193411)
chr8 (341-433)||(12437746-12437839)
chr8 (370-423)||(28073070-28073123)
chr8 (354-423)||(35688283-35688352)
[»] scaffold0664 (1 HSPs)
scaffold0664 (268-387)||(6066-6186)


Alignment Details
Target: chr5 (Bit Score: 345; Significance: 0; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 19 - 502
Target Start/End: Original strand, 22415116 - 22415596
Alignment:
Q  19 acaaaaatggtctgtattttcgattggcatgtcattatttagatgttcatatatcaatcctctatttgatattacgtttgggatgttgggtgtaaaagag 118  Q
    |||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22415116 acaaaaatggtctgtattttcgattggt-tgtcattatttgaatgttcatatatcaatcctctatttgatattacgtttgggatgttgggtgtgaaagag 22415214  T
Q  119 tgtttcattcatccatcgaatgatacaaggaagtagaagtgttcatagtgcgtttaggatcgattttaaggctaaatgtcattcgaactataacatnnnn 218  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||        
T  22415215 tgtttcattcatccatcaaatgatacaaggaagtaggagtgttcatagtgcgtttaggatcgattttaaggctaaatg-catccgaactacaacataaaa 22415313  T
Q  219 nnnnnngattgcagtttaatttgattttgctggcttttnnnnnnnnttgaaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaa 318  Q
          ||||||||||||||||||||||| ||||||||         |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22415314 aaaaa-gattgcagtttaatttgattttgttggcttttaaaaaaaactgaaaccaatgttgtttgagttggttcgttttatgcagttttttgcgagacaa 22415412  T
Q  319 tccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcatttt 418  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22415413 tccaactttttgtttctaacattaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcatctt 22415512  T
Q  419 catccaacaacgttcccattaaccatgatggtcaatcttacaccgaagcagaccaacctcacacttataaagatgacacttctt 502  Q
    |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22415513 catccaacaatgttcccattaaccatgatggtcaaccttacactgaagcagaccaacctcacacttataaagatgacacttctt 22415596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 303 - 434
Target Start/End: Complemental strand, 734010 - 733880
Alignment:
Q  303 gttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaac 402  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||  ||||| |||||||||||||||||| ||| ||||||||| ||| ||||||||    
T  734010 gttttttgcgagacaatacaactttttgtttccaacattaaaatcaagctaaaa-gttaaaaacaacttattttcaaaaatgtttcaaatttgatccaac 733912  T
Q  403 attacaatttcattttcatccaacaacgttcc 434  Q
    | |||||||| ||||||||||| ||| |||||    
T  733911 agtacaattttattttcatccagcaatgttcc 733880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 423
Target Start/End: Original strand, 1681198 - 1681340
Alignment:
Q  280 tttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaa 379  Q
    ||||| |||||||| ||  ||| ||||||| ||||||||| ||| |||||  ||  |||  ||||||||| |||||| |||||||||||||||||| |||    
T  1681198 tttggattggttcggttgttgcggttttttacgagacaatacaaattttttatttcaacgttaaaatcaagttaaaa-gttaaaaacaacttattttcaa 1681296  T
Q  380 caatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||| ||| | ||| |||||||||||||||||| ||||||||||    
T  1681297 caatattttaaatttgatccaacattacaattttattttcatcc 1681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 41454991 - 41455095
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||| ||||| || |||||||| | |||  |||||||||| |||||| ||||||||||    
T  41454991 tttttgtttccaacattaaaatcaaattaaaaagctaaaacacaacatattttcatcaatgttttaaatttcatccaacatttcaattttattttcatcc 41455090  T
Q  424 aacaa 428  Q
    |||||    
T  41455091 aacaa 41455095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 299 - 426
Target Start/End: Original strand, 34872287 - 34872413
Alignment:
Q  299 tgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatc 398  Q
    ||||||||||||| ||||||  ||| ||||| |||  |||| |||| |||  | |||||||||||||||| || ||||||||||||||||| |||  ||     
T  34872287 tgcagttttttgcaagacaacacaattttttatttacaacattaaa-tcagatcaaaaagttaaaaacaagttgtttccaacaatgtttcatatttcatt 34872385  T
Q  399 caacattacaatttcattttcatccaac 426  Q
    |||||||| |||||||||||||| ||||    
T  34872386 caacattataatttcattttcattcaac 34872413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 437
Target Start/End: Complemental strand, 6367822 - 6367696
Alignment:
Q  304 ttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaaca 403  Q
    |||||||||||||||| ||| | |||||||| |||| |||||| || |||||||||| ||| ||||       ||||||||||| | ||| |||| ||||    
T  6367822 ttttttgcgagacaatacaattctttgtttccaacattaaaataaagttaaaaagtttaaatcaac-------caacaatgttttaaattcgatctaaca 6367730  T
Q  404 ttacaatttcattttcatccaacaacgttcccat 437  Q
    ||||||||| || |||||||||||| ||| ||||    
T  6367729 ttacaattttatgttcatccaacaatgtttccat 6367696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 19402305 - 19402408
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcca 424  Q
    |||||||||| |||| |||||||||  |||||||||||| | | ||||||| ||  |||||||||||||  ||| ||||||  ||||| |||||||||||    
T  19402305 tttttgtttccaacattaaaatcaaaataaaaagttaaatatagcttattttcagtaatgtttcagattttatcgaacattctaattttattttcatcca 19402404  T
Q  425 acaa 428  Q
    ||||    
T  19402405 acaa 19402408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 12264046 - 12264104
Alignment:
Q  375 tccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttc 433  Q
    ||||||||||||||| |||  |||||| |||||||||||||||||||||||||| ||||    
T  12264046 tccaacaatgtttcaaatttcatccaaaattacaatttcattttcatccaacaatgttc 12264104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 25495208 - 25495318
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||||  |||| ||||||||| |||||||| ||||| ||||| ||||| ||||||||||| | ||   ||| ||||||| ||||| ||||||||||    
T  25495208 tttttgttttcaacattaaaatcaaattaaaaaggtaaaacacaacatattttcaacaatgttttaaatatcatcaaacattataattttattttcatcc 25495307  T
Q  424 aacaacgttcc 434  Q
    ||||| |||||    
T  25495308 aacaatgttcc 25495318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 428
Target Start/End: Complemental strand, 7591533 - 7591417
Alignment:
Q  312 gagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaat 410  Q
    ||||||||  || |||||||||  |||| |||||| || |||||||||||||| ||||| ||||||||||||||||| | |||  |||| ||| || |||    
T  7591533 gagacaatataattttttgttttcaacattaaaat-aagttaaaaagttaaaatacaacatatttccaacaatgttttatatttcatccgacagtaaaat 7591435  T
Q  411 ttcattttcatccaacaa 428  Q
    |||||||||| |||||||    
T  7591434 ttcattttcacccaacaa 7591417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 421
Target Start/End: Original strand, 14652530 - 14652673
Alignment:
Q  280 tttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaa--gttaaaaacaacttatttcc 377  Q
    |||||||||| ||| ||  ||||||||||| |||||| || ||| |||||||||  |||| ||||||||| |||||||   ||||| ||||| ||||| |    
T  14652530 tttgggttggatcggttggtgcagtttttttcgagacgatgcaattttttgttttcaacattaaaatcaagttaaaaaagcttaaacacaacatattttc 14652629  T
Q  378 aacaatgtttcagattggatccaacattacaatttcattttcat 421  Q
    | |||||||| | |||  ||| || |||||||||| ||||||||    
T  14652630 agcaatgttttaaatttcatcaaatattacaattttattttcat 14652673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 421
Target Start/End: Original strand, 11402716 - 11402813
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcat 421  Q
    |||||||||| |||| ||||||||| |||||||| | ||| ||||| ||||| || |||||||| | |||  ||| || |||||||||||||||||||    
T  11402716 tttttgtttccaacattaaaatcaagttaaaaagctgaaacacaacatattttcagcaatgttttaaattccatcaaatattacaatttcattttcat 11402813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 428
Target Start/End: Original strand, 8150729 - 8150848
Alignment:
Q  308 ttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattac 407  Q
    |||||| ||||| |||| ||||||||  ||   ||||||||| |||||| ||||||| ||  || ||| ||| | ||||||| ||| |||||||||||||    
T  8150729 ttgcgaaacaatacaacattttgtttacaatgttaaaatcaagttaaaa-gttaaaagcagtttgttttcaatactgtttcaaatttgatccaacattac 8150827  T
Q  408 aatttcattttcatccaacaa 428  Q
     |||| |||||||||||||||    
T  8150828 gattttattttcatccaacaa 8150848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 34881269 - 34881174
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttccca 436  Q
    ||||||||| |||||||  ||||| ||||| |||||| |||||||||| | |||  ||||||||||| ||||| ||||||||||||| | |||||||    
T  34881269 taaaatcaagttaaaaatctaaaacacaacgtatttc-aacaatgttttaaatttcatccaacattaaaattttattttcatccaacgatgttccca 34881174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 1014497 - 1014456
Alignment:
Q  395 gatccaacattacaatttcattttcatccaacaacgttccca 436  Q
    |||||||||||| |||||||||| |||||||||| |||||||    
T  1014497 gatccaacattataatttcatttccatccaacaatgttccca 1014456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 28224823 - 28224730
Alignment:
Q  327 tttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttc 419  Q
    |||||||  |||| ||||||||| ||||||||  |||| ||||  ||||| ||||||||||| | |||  ||||||||||||||||| ||||||    
T  28224823 tttgttttcaacattaaaatcaaattaaaaagcaaaaatacaatatattttcaacaatgttttacatttcatccaacattacaattttattttc 28224730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 420
Target Start/End: Original strand, 34969395 - 34969547
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-ac 366  Q
    ||||||||||  |||||||||| ||| || ||||  ||||||  | |||||| ||| |||||||||  |||| ||||||||| |||||||  ||||| ||    
T  34969395 aaaccaatgtgatttgggttggatcggttgatgcgattttttatgggacaatacaa-tttttgttttcaacattaaaatcaagttaaaaaactaaaacac 34969493  T
Q  367 aacttatttccaacaatgtttcagattggatccaacattacaatttcattttca 420  Q
    ||| || |||||||||| ||| | |||  ||| || |||| |||||||||||||    
T  34969494 aacatacttccaacaatcttttaaatttcatcaaatattaaaatttcattttca 34969547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 303 - 433
Target Start/End: Original strand, 25858289 - 25858419
Alignment:
Q  303 gttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaac 402  Q
    ||||||||||||||| |  || ||||| |||  |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| |||   ||||||    
T  25858289 gttttttgcgagacattataattttttattttcaacattaaaatcaagttaaaaagttaaaaacaacttattttcaacaatgtttcaaatttcttccaac 25858388  T
Q  403 attacaatttcattttcatccaacaacgttc 433  Q
    ||||||||||||||||||| |||||| ||||    
T  25858389 attacaatttcattttcattcaacaatgttc 25858419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 268 - 423
Target Start/End: Original strand, 20038450 - 20038604
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaaca 367  Q
    |||||||||  |||||| |||||||  ||  ||| |||||||||||||||||| || |||| ||||  |||  ||||||||| |||||| | ||||||||    
T  20038450 aaaccaatgcggtttggattggttcaattgttgcggttttttgcgagacaatctaatttttcgttttcaacgttaaaatcaagttaaaa-gataaaaaca 20038548  T
Q  368 acttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  20038549 acttattttcaacaatgtttcaaatttgatccaacattacaattttattttcatcc 20038604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 299 - 428
Target Start/End: Complemental strand, 25089712 - 25089583
Alignment:
Q  299 tgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatc 398  Q
    |||||||||| |||||| ||| ||| |||||||||| |||| |||||||||  ||||| ||||||||||| ||||||   | ||||||||| ||| ||||    
T  25089712 tgcagtttttcgcgagaaaatacaattttttgtttccaacaataaaatcaagctaaaaggttaaaaacaaattattttttataatgtttcaaatttgatc 25089613  T
Q  399 caacattacaatttcattttcatccaacaa 428  Q
     ||||||||||||||||||| |||||||||    
T  25089612 taacattacaatttcatttttatccaacaa 25089583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 418
Target Start/End: Original strand, 35143105 - 35143171
Alignment:
Q  352 taaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcatttt 418  Q
    |||||||||||||||||||||||| |||||||||||   |||  |||||||||||||||||||||||    
T  35143105 taaaaagttaaaaacaacttattttcaacaatgtttacaatttaatccaacattacaatttcatttt 35143171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 420
Target Start/End: Original strand, 25465902 - 25466019
Alignment:
Q  304 ttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaac 402  Q
    |||||| | ||||||| ||| |||||||||  |||| ||||||||| |||||| | ||||| ||||| ||||| ||||||||||| | |||  ||| |||    
T  25465902 tttttttcaagacaatacaattttttgttttcaacattaaaatcaagttaaaaggctaaaacacaacatattttcaacaatgttttaaatttcatcaaac 25466001  T
Q  403 attacaatttcattttca 420  Q
    ||||||||||||||||||    
T  25466002 attacaatttcattttca 25466019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 437
Target Start/End: Original strand, 21238137 - 21238267
Alignment:
Q  303 gttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaac 402  Q
    |||||||| ||||||||  || ||||||||||||||| ||| ||||| || ||||| |||||||||||||||| ||||   || ||| ||| |||| |||    
T  21238137 gttttttgtgagacaatataattttttgtttctaacattaagatcaagtt-aaaagctaaaaacaacttattttcaac---gtctcaaatttgatctaac 21238232  T
Q  403 attacaatttcattttcatccaacaacgttcccat 437  Q
    |||||||||| | ||||||||| ||| ||| ||||    
T  21238233 attacaattttagtttcatccatcaatgtttccat 21238267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 433
Target Start/End: Complemental strand, 55467604 - 55467497
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcca 424  Q
    |||||||||| |||| ||||||||| |||||||| ||||| || | ||||| || |||||||| | |||  ||||||||| ||||||| |||||||||||    
T  55467604 tttttgtttccaacattaaaatcaaattaaaaagataaaa-caccatattttcagcaatgttttaaatttcatccaacataacaattttattttcatcca 55467506  T
Q  425 acaacgttc 433  Q
    |||| ||||    
T  55467505 acaatgttc 55467497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 427
Target Start/End: Complemental strand, 45915171 - 45915068
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaaa-caacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    ||||| ||||||||| ||||||||| ||||||||  ||||  |||| ||||| ||||||||||| | |||  ||||||||||||||||| |||||||||     
T  45915171 tttttttttctaacattaaaatcaaattaaaaagccaaaattcaacatattttcaacaatgttttaaatttcatccaacattacaattttattttcatca 45915072  T
Q  424 aaca 427  Q
    ||||    
T  45915071 aaca 45915068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 356 - 437
Target Start/End: Complemental strand, 30739564 - 30739480
Alignment:
Q  356 aagttaaaaacaacttatttccaacaa---tgtttcagattggatccaacattacaatttcattttcatccaacaacgttcccat 437  Q
    |||||||||||||||| ||||||||||   ||||| | ||| ||||  |||||||||||||||||||||||||||| ||| ||||    
T  30739564 aagttaaaaacaacttttttccaacaacaatgtttgaaatttgatctgacattacaatttcattttcatccaacaatgtttccat 30739480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 45629311 - 45629415
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||||| |||| ||||||||| |||||||| ||||| | ||| ||||| || |||| ||| | |||  || |||||||||||||| ||||||||||    
T  45629311 tttttgtttccaacattaaaatcaaattaaaaaggtaaaacataacatattttcagcaatattttaaatttcatacaacattacaattttattttcatcc 45629410  T
Q  424 aacaa 428  Q
    |||||    
T  45629411 aacaa 45629415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 2566281 - 2566187
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttcc 434  Q
    ||||||||| | |||||| ||||| ||||| ||||| |||| |||||| | |||  ||| ||||||||||||| ||||||||||||||| |||||    
T  2566281 taaaatcaaataaaaaagctaaaacacaacatattttcaaccatgttttaaatttcatctaacattacaattttattttcatccaacaatgttcc 2566187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 421
Target Start/End: Complemental strand, 8557970 - 8557817
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaag-ttaaaaac 366  Q
    |||||||||  |||||||| || ||| ||| ||| |||||||   |||| || ||| |||||||||| |||| ||||||||| |||||||| ||||| ||    
T  8557970 aaaccaatgcggtttgggtcggatcggtttgtgcggtttttttt-agacgatacaattttttgtttccaacattaaaatcaagttaaaaagcttaaacac 8557872  T
Q  367 aacttatttccaacaatgtttcagattggatccaacattacaatttcattttcat 421  Q
    ||| ||||| |  |||||||| | |||  ||| || |||||||||||||||||||    
T  8557871 aacatattttctgcaatgttttaaatttcatcaaatattacaatttcattttcat 8557817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 421
Target Start/End: Original strand, 37045374 - 37045528
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-ac 366  Q
    |||||||| | ||||||||||  ||| ||  ||| ||||||| || ||| || | | |||||||||| |||| |||||||||  ||||||| | ||| ||    
T  37045374 aaaccaatatggtttgggttgtatcggttggtgcggtttttttcgtgacgatacgattttttgtttccaacattaaaatcaagataaaaagctgaaacac 37045473  T
Q  367 aacttatttccaacaatgtttcagattggatccaacattacaatttcattttcat 421  Q
    ||  ||||| ||||||||||| | |||  ||| ||||||||||||||||||||||    
T  37045474 aatatattttcaacaatgttttaaatttcatcaaacattacaatttcattttcat 37045528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 40484071 - 40484139
Alignment:
Q  355 aaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||| |||||||||||| |||||||||||||  || || | |||||||||||||  |||||||||    
T  40484071 aaagttaataacaacttattttcaacaatgtttcaattttgaactaacattacaattttgttttcatcc 40484139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 421
Target Start/End: Complemental strand, 50578982 - 50578866
Alignment:
Q  306 ttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaag-ttaaaaacaacttatttccaacaatgtttcagattggatccaacat 404  Q
    |||| |||||| || ||| |||| ||||| |||| ||||||||| | |||||| ||||| ||||||||||| || |||||||| | |||  ||| || ||    
T  50578982 tttttcgagacgattcaatttttagtttccaacattaaaatcaagtaaaaaagattaaacacaacttattttcagcaatgttttaaatttcatcaaatat 50578883  T
Q  405 tacaatttcattttcat 421  Q
    ||||||||| |||||||    
T  50578882 tacaatttcgttttcat 50578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 38680917 - 38680992
Alignment:
Q  313 agacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgttt 387  Q
    |||||||  ||| ||||||||| || | |||||| || |||||||||||||| ||||| |||||||||||||||||    
T  38680917 agacaataaaacattttgtttccaatattaaaattaagttaaaaagttaaaacacaacatatttccaacaatgttt 38680992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 436
Target Start/End: Original strand, 26758352 - 26758458
Alignment:
Q  331 tttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaac 429  Q
    |||| |||| |||||| || |||||||| ||||| ||||| ||||| || |||||||| | |||  |  ||| |||||||||| |||||||||||||||     
T  26758352 tttccaacattaaaattaaattaaaaagctaaaacacaacatattttcagcaatgttttaaatttcactcaaaattacaattttattttcatccaacaat 26758451  T
Q  430 gttccca 436  Q
    |||||||    
T  26758452 gttccca 26758458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 51194357 - 51194450
Alignment:
Q  341 taaaatcaatttaaaaagttaaaaacaacttatttcca-acaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttcc 434  Q
    ||||||||| |||||| ||||||||||| ||||||    ||||||||||| ||| || | ||||||||||||| ||||| ||||||||| |||||    
T  51194357 taaaatcaagttaaaa-gttaaaaacaatttatttttttacaatgtttcaaatttgaacaaacattacaattttatttttatccaacaatgttcc 51194450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 5640709 - 5640597
Alignment:
Q  305 tttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacat 404  Q
    ||||| ||||| ||| ||| |||||||||| |||| ||||||||| ||||||    ||| ||| | ||||| ||||||||||| | |||  ||| || ||    
T  5640709 ttttttcgagagaatacaattttttgtttccaacattaaaatcaagttaaaagtagaaacacaccatattttcaacaatgttttaaatttcatcaaatat 5640610  T
Q  405 tacaatttcattt 417  Q
    |||||||||||||    
T  5640609 tacaatttcattt 5640597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 5671984 - 5671872
Alignment:
Q  305 tttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacat 404  Q
    ||||| ||||| ||| ||| |||||||||| |||| ||||||||| ||||||  | ||| ||| | ||||| ||||| ||||| | |||  ||| || ||    
T  5671984 ttttttcgagagaatacaattttttgtttccaacattaaaatcaagttaaaagttgaaacacaccatattttcaacattgttttaaatttcatcaaatat 5671885  T
Q  405 tacaatttcattt 417  Q
    |||||||||||||    
T  5671884 tacaatttcattt 5671872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 5681481 - 5681369
Alignment:
Q  305 tttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacat 404  Q
    ||||| ||||| ||| ||| |||||||||| |||| ||||||||| ||||||  | ||| ||| | ||||| ||||| ||||| | |||  ||| || ||    
T  5681481 ttttttcgagagaatacaattttttgtttccaacattaaaatcaagttaaaagttgaaacacaccatattttcaacattgttttaaatttcatcaaatat 5681382  T
Q  405 tacaatttcattt 417  Q
    |||||||||||||    
T  5681381 tacaatttcattt 5681369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 428
Target Start/End: Complemental strand, 10481513 - 10481481
Alignment:
Q  396 atccaacattacaatttcattttcatccaacaa 428  Q
    ||||||||||||||||||||||||||| |||||    
T  10481513 atccaacattacaatttcattttcatctaacaa 10481481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 433
Target Start/End: Complemental strand, 25919216 - 25919108
Alignment:
Q  326 ttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcca 424  Q
    |||| |||| |||| | ||||||| |||||||| ||||| ||||| ||||| ||  ||||||| | |||  | |||||||| |||||| |||||||||||    
T  25919216 ttttttttccaacatttaaatcaaattaaaaagctaaaacacaacatattttcactaatgttttaaatttcacccaacatttcaattttattttcatcca 25919117  T
Q  425 acaacgttc 433  Q
    |||| ||||    
T  25919116 acaatgttc 25919108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 28792176 - 28792212
Alignment:
Q  351 ttaaaaagttaaaaacaacttatttccaacaatgttt 387  Q
    |||||||||||||||||| |||||| |||||||||||    
T  28792176 ttaaaaagttaaaaacaaattatttgcaacaatgttt 28792212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 429
Target Start/End: Complemental strand, 6946530 - 6946406
Alignment:
Q  306 ttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacat 404  Q
    |||| ||||||||| ||| |||||||||| |||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| | |||  |||||||||    
T  6946530 tttttcgagacaatacaattttttgtttccaacattaaaatcaagttaaaaaggtaaaacacaacttatttccaacaatgttttatatttcatccaacat 6946431  T
Q  405 tacaatttcattttcatccaacaac 429  Q
    || ||||||||||||| ||||||||    
T  6946430 taaaatttcattttcacccaacaac 6946406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 418
Target Start/End: Original strand, 32646365 - 32646468
Alignment:
Q  313 agacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaattt 412  Q
    ||||||| ||| |||||||||| |||| ||| |||||  ||||||||||||| |||||||||| ||||||||||||| ||| ||||||||| ||||||||    
T  32646365 agacaatgcaattttttgtttccaacattaagatcaaaataaaaagttaaaa-caacttattttcaacaatgtttcaaatttgatccaaca-tacaattt 32646462  T
Q  413 catttt 418  Q
    ||||||    
T  32646463 catttt 32646468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 429
Target Start/End: Complemental strand, 24725750 - 24725657
Alignment:
Q  336 aacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaac 429  Q
    |||| ||||||||| |||||||||||||| ||||| |||||||| |||||||| | |||  ||||||||||| ||||||||||||| ||||||||    
T  24725750 aacattaaaatcaagttaaaaagttaaaagacaacatatttccagcaatgttttatatttcatccaacatta-aatttcattttcacccaacaac 24725657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 11678115 - 11678219
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaaac-aacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||||| |||| ||||||||| |||||||| ||||||  ||| ||||| ||||||| ||| | |||  ||||| ||||||||||| ||||||||||    
T  11678115 tttttgtttccaacattaaaatcaaattaaaaagctaaaaaagaacatattttcaacaatattttaaatttcatccagcattacaattttattttcatcc 11678214  T
Q  424 aacaa 428  Q
    |||||    
T  11678215 aacaa 11678219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 11695593 - 11695697
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaaac-aacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||||| |||| ||||||||| |||||||| ||||||  ||| ||||| ||||||| ||| | |||  ||||| ||||||||||| ||||||||||    
T  11695593 tttttgtttccaacattaaaatcaaattaaaaagctaaaaaagaacatattttcaacaatattttaaatttcatccagcattacaattttattttcatcc 11695692  T
Q  424 aacaa 428  Q
    |||||    
T  11695693 aacaa 11695697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 386
Target Start/End: Original strand, 28790571 - 28790690
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-ac 366  Q
    |||||||||| |||||||| || ||| ||  ||| ||||||| ||||| ||| ||| |||||||||| |||| ||||||| | |||||||| || || ||    
T  28790571 aaaccaatgtggtttgggtcggatcggttggtgcggttttttccgagataatacaattttttgtttccaacattaaaatcgagttaaaaagctataacac 28790670  T
Q  367 aacttatttccaacaatgtt 386  Q
    ||| ||||||||||||||||    
T  28790671 aacatatttccaacaatgtt 28790690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 356 - 425
Target Start/End: Complemental strand, 33426471 - 33426399
Alignment:
Q  356 aagttaaaaacaacttatttccaacaatgtttcagattggatc---caacattacaatttcattttcatccaa 425  Q
    |||||||||||||||||||| |||| |||||||| ||| ||||   ||| |||||||||||||||||||||||    
T  33426471 aagttaaaaacaacttattttcaactatgtttcaaatttgatcaaacaatattacaatttcattttcatccaa 33426399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 427
Target Start/End: Complemental strand, 15698136 - 15698060
Alignment:
Q  351 ttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaaca 427  Q
    ||||||| ||||||||||||||||| ||||||||||| | ||| ||||| | |||| ||||| |||||||| |||||    
T  15698136 ttaaaaatttaaaaacaacttattttcaacaatgtttaaaatttgatccgagattaaaattttattttcattcaaca 15698060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 427
Target Start/End: Complemental strand, 15698233 - 15698157
Alignment:
Q  351 ttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaaca 427  Q
    ||||||| ||||||||||||||||| ||||||||||| | ||| ||||| | |||| ||||| |||||||| |||||    
T  15698233 ttaaaaatttaaaaacaacttattttcaacaatgtttaaaatttgatccgagattaaaattttattttcattcaaca 15698157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 1331070 - 1331177
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaaca 367  Q
    |||||||||| ||||||||||| ||  ||  ||| ||||||| ||||||||| ||| |||||||||| |||| ||||||| | |||||| || ||| |||    
T  1331070 aaaccaatgtggtttgggttggatcagttggtgcggtttttttcgagacaatacaattttttgtttccaacattaaaatcgagttaaaaggtaaaacaca 1331169  T
Q  368 acttattt 375  Q
    || |||||    
T  1331170 acatattt 1331177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 425
Target Start/End: Original strand, 26316283 - 26316366
Alignment:
Q  342 aaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaa 425  Q
    |||||||  ||| |||||||||||||||||||||| || ||||||||| |||  || ||||||||| |||| |||||| |||||    
T  26316283 aaaatcatgttacaaagttaaaaacaacttatttctaaaaatgtttcaaatttcatacaacattacgattttattttcttccaa 26316366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 5862561 - 5862524
Alignment:
Q  396 atccaacattacaatttcattttcatccaacaacgttc 433  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  5862561 atccaacattacaattttattttcatccaacaatgttc 5862524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 36075557 - 36075617
Alignment:
Q  356 aagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcatt 416  Q
    ||||||||||| ||||||||| | ||| |||||| |||  ||||||||||||| |||||||    
T  36075557 aagttaaaaactacttatttcaaccaacgtttcaaatttcatccaacattacattttcatt 36075617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 9e-25; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 428
Target Start/End: Original strand, 43908747 - 43908894
Alignment:
Q  280 tttgggttggttcgttttatgcagtttttt-gcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttcca 378  Q
    |||| ||||||||| ||  ||||||||||| || ||||||| ||  ||||| |||| |||| |||||| ||||  ||||||||||||||| |||||| ||    
T  43908747 tttgagttggttcggttgttgcagtttttttgctagacaatacacttttttatttccaacattaaaattaatt--aaaagttaaaaacaatttattttca 43908844  T
Q  379 acaatgtttcagattggatccaacattacaatttcattttcatccaacaa 428  Q
    ||||||||||| ||| |||| ||||||||||||| |||||||||||||||    
T  43908845 acaatgtttcaaatttgatcaaacattacaattttattttcatccaacaa 43908894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 428
Target Start/End: Complemental strand, 6880107 - 6879957
Alignment:
Q  279 gtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttcc 377  Q
    ||||||||||| ||| |||| ||  |||||  ||||||||| ||| |||||||||  |||  ||||||||| |||||||||||||| ||||| ||||| |    
T  6880107 gtttgggttggatcggtttaagcgatttttgtcgagacaatacaattttttgttttcaaccttaaaatcaagttaaaaagttaaaacacaacatattttc 6880008  T
Q  378 aacaatgtttcagattggatccaacattacaatttcattttcatccaacaa 428  Q
    |||||||||| | |||  ||||||||||| ||||  ||||||||| |||||    
T  6880007 aacaatgttttaaatttcatccaacattaaaattaaattttcatctaacaa 6879957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 11834413 - 11834317
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttccca 436  Q
    ||||||||| |||||||| ||||| ||||| ||||| ||||||||||| | |||  ||||||||||||| ||| ||||||||||||||| |||||||    
T  11834413 taaaatcaaattaaaaagctaaaacacaacatattttcaacaatgttttaaattttatccaacattacagttttattttcatccaacaatgttccca 11834317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 433
Target Start/End: Original strand, 20334701 - 20334810
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaaac-aacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||||| |||| ||||||||| || ||||||||||| | ||| || || || |||||||| | ||| |||||||||||||||||| ||||| ||||    
T  20334701 tttttgtttccaacattaaaatcaaattgaaaagttaaaacccaacataatttcagcaatgttttaaatttgatccaacattacaattttatttttatcc 20334800  T
Q  424 aacaacgttc 433  Q
    ||||| ||||    
T  20334801 aacaatgttc 20334810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 31287730 - 31287626
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaa-aacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||||| |||| ||||||||| |||||||||||||  ||||| ||||| || ||| |||| | |||  ||||||||||||||||  ||||||||||    
T  31287730 tttttgtttccaacattaaaatcaaattaaaaagttaaaccacaacatattttcagcaacgttttaaattttatccaacattacaattgtattttcatcc 31287631  T
Q  424 aacaa 428  Q
    |||||    
T  31287630 aacaa 31287626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 271 - 437
Target Start/End: Original strand, 16359234 - 16359392
Alignment:
Q  271 ccaatgttgtttgggttggtt-cgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaac 369  Q
    ||||| |||||| |||||||| |||| | ||||||||||  ||||||||| ||| ||||| |||| |||| |||||||||        |||||| ||||     
T  16359234 ccaatattgttttggttggtttcgttgt-tgcagtttttatcgagacaatacaaatttttctttccaacattaaaatcaa--------gttaaatacaat 16359324  T
Q  370 ttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttcccat 437  Q
    ||||||||  |||||||| | |||  ||||||||||| |||||||||||||||||||||  |||||||    
T  16359325 ttatttcctgcaatgttttaaattttatccaacattataatttcattttcatccaacaatattcccat 16359392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 421
Target Start/End: Original strand, 37375389 - 37375542
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-ac 366  Q
    |||||||||  ||||||||||  ||| ||  ||| ||||||| ||| || || ||| |||||||||| |||| ||||||||| ||||||| || ||| ||    
T  37375389 aaaccaatgcggtttgggttgaatcggttggtgcggtttttt-cgatacgatacaattttttgtttccaacattaaaatcaagttaaaaattttaaacac 37375487  T
Q  367 aacttatttccaacaatgtttcagattggatccaacattacaatttcattttcat 421  Q
    ||| ||||| ||||||||||| | |||  ||| || |||||||||||||||||||    
T  37375488 aacatattttcaacaatgttttaaatttcatcaaatattacaatttcattttcat 37375542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 10338756 - 10338660
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttccca 436  Q
    |||||||||||||||||| || || ||||| |||||||||||||||||   |||  |||||| |||| ||||| |||| |||||||||| |||||||    
T  10338756 taaaatcaatttaaaaagctataacacaacatatttccaacaatgttttcaatttcatccaatattagaattttatttccatccaacaatgttccca 10338660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 421
Target Start/End: Complemental strand, 30079604 - 30079452
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-ac 366  Q
    |||||||||  ||||||||||| ||| ||  ||| |||||||   |||| || ||| |||||||||| |||| ||||||||| |||||||| ||||| ||    
T  30079604 aaaccaatgcggtttgggttggatcggttggtgcggttttttt--agacgatacaattttttgtttccaacattaaaatcaacttaaaaagctaaaacac 30079507  T
Q  367 aacttatttccaacaatgtttcagattggatccaacattacaatttcattttcat 421  Q
    ||  ||||| || |||||||| | |||  ||| || |||||||||||||||||||    
T  30079506 aatatattttcagcaatgttttaaattttatcaaatattacaatttcattttcat 30079452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 421
Target Start/End: Complemental strand, 8118302 - 8118149
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaag-ttaaaaac 366  Q
    |||||||||||||||||||||| ||| ||  ||| |||| || |||||| ||  || |||||||||  |||| ||||||||| |||||||| | ||| ||    
T  8118302 aaaccaatgttgtttgggttggatcggttagtgcggtttgtt-cgagacgatataattttttgttttcaacattaaaatcaagttaaaaagctgaaacac 8118204  T
Q  367 aacttatttccaacaatgtttcagattggatccaacattacaatttcattttcat 421  Q
    ||| ||||| || |||||||| | |||  ||| | ||||||||||| ||||||||    
T  8118203 aacatattttcagcaatgttttaaatttcatcaagcattacaatttaattttcat 8118149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 34751109 - 34751214
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaaa--caacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatc 422  Q
    ||||||||||  ||| ||||||||| |||||||| ||||||  || | ||||| || |||||||| | |||  || |||||||||||||| |||||||||    
T  34751109 tttttgtttcccacattaaaatcaaattaaaaagctaaaaatgcagcatattttcagcaatgttttaaatttcatacaacattacaattttattttcatc 34751208  T
Q  423 caacaa 428  Q
    ||||||    
T  34751209 caacaa 34751214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 7685940 - 7685844
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa 364  Q
    |||||||||  ||||||||||| |||  || ||  ||||||  ||||| ||| ||| ||||||||| ||||| ||||||||| ||||||||||||||    
T  7685940 aaaccaatgcggtttgggttggatcggattgtgtggtttttgtcgagataattcaattttttgtttttaacattaaaatcaagttaaaaagttaaaa 7685844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 22298722 - 22298762
Alignment:
Q  396 atccaacattacaatttcattttcatccaacaacgttccca 436  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  22298722 atccaacattacaattttattttcatccaacaatgttccca 22298762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 424
Target Start/End: Complemental strand, 23707060 - 23706992
Alignment:
Q  356 aagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcca 424  Q
    |||||||||| |||||||||| | ||| |||||| |||  |||||| |||||||||| |||||||||||    
T  23707060 aagttaaaaataacttatttctagcaacgtttcaaatttcatccaatattacaatttaattttcatcca 23706992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 36875276 - 36875220
Alignment:
Q  356 aagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaattt 412  Q
    ||||||||| |||||||||| ||||||||||||| | |  |||||||||||||||||    
T  36875276 aagttaaaagcaacttattttcaacaatgtttcaaaataaatccaacattacaattt 36875220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 428
Target Start/End: Complemental strand, 40398543 - 40398456
Alignment:
Q  341 taaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaa 428  Q
    ||||||||| |||||   || ||||||||||| || ||||||||||||| ||| ||| ||||  |||||||| |||| ||||||||||    
T  40398543 taaaatcaagttaaacgatttaaaacaacttactttcaacaatgtttcatatttgattcaacgctacaattttatttacatccaacaa 40398456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 420
Target Start/End: Original strand, 41459272 - 41459389
Alignment:
Q  304 ttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaac 402  Q
    |||||| ||||||||| | || ||||||||| |||| ||||||| | |||||| | ||||  ||||| ||||||||||||| |||   |||  |||  ||    
T  41459272 tttttttcgagacaatacgaccttttgtttccaacattaaaatcgagttaaaaggctaaagcacaacatatttccaacaatatttttaatttcatctcac 41459371  T
Q  403 attacaatttcattttca 420  Q
    ||||||||||||||||||    
T  41459372 attacaatttcattttca 41459389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 417
Target Start/End: Original strand, 1812627 - 1812691
Alignment:
Q  354 aaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattt 417  Q
    ||||||||||| ||||| ||||| ||||| ||||| |||||  ||||||||||||||||| ||||    
T  1812627 aaaagttaaaacacaacatattttcaacagtgttttagatttcatccaacattacaattttattt 1812691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 364
Target Start/End: Original strand, 29628168 - 29628263
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa 364  Q
    |||||||||| ||||||||||| ||| ||  ||| | ||||| ||||||||| ||| |||||||||| |||| ||||| | | |||||||| |||||    
T  29628168 aaaccaatgtggtttgggttggatcggttggtgc-gattttttcgagacaatacaattttttgtttccaacattaaaaccgagttaaaaaggtaaaa 29628263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 279 - 437
Target Start/End: Original strand, 28610694 - 28610848
Alignment:
Q  279 gtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttcca 378  Q
    |||||| |||||||| ||  ||||||||||| | ||||||| ||| |||||||||  |||| ||||||||| |||||| |||||||||||||||||||||    
T  28610694 gtttggattggttcggttgttgcagtttttt-caagacaatacaattttttgttttcaacaataaaatcaagttaaaa-gttaaaaacaacttatttcca 28610791  T
Q  379 acaatgtttcagattggatccaacattac-aatttcattttcatccaacaacgttcccat 437  Q
    ||||| ||||| |||    |||||||||| ||||| ||||||||||||||| ||||||||    
T  28610792 acaatatttcaaatt---accaacattacaaattttattttcatccaacaatgttcccat 28610848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 24644903 - 24644810
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttc 433  Q
    ||||||||| |||||||  ||||| ||||| ||||| ||||||||||| | |||  ||||||||||||||||| ||||||||||||||| ||||    
T  24644903 taaaatcaaattaaaaaactaaaacacaacatattttcaacaatgttttaaatttcatccaacattacaattttattttcatccaacaatgttc 24644810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 7170031 - 7169935
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttccca 436  Q
    ||||||||| |||||||||||||| ||||| |||||  | |||||||| | |||  ||||||||||||||||| |||| |||||||||| |||||||    
T  7170031 taaaatcaaattaaaaagttaaaacacaacatatttttagcaatgttttaaatttcatccaacattacaattttatttccatccaacaatgttccca 7169935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 14564503 - 14564619
Alignment:
Q  273 aatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaactt 371  Q
    ||||| ||||||||||| ||| ||  ||| ||||||| | ||||||| ||| |||||||||| |||| ||||||||| |||||||  ||||| ||||| |    
T  14564503 aatgtggtttgggttggatcggttgttgcggttttttactagacaatacaattttttgtttcgaacattaaaatcaagttaaaaaactaaaacacaacat 14564602  T
Q  372 atttccaacaatgtttc 388  Q
    ||||| |||||||||||    
T  14564603 atttctaacaatgtttc 14564619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 12147937 - 12147860
Alignment:
Q  356 aagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttc 433  Q
    |||||||||| |||||| || ||||||||||||| ||| ||||||| ||||| |||| ||||||||| ||||| ||||    
T  12147937 aagttaaaaataacttaatttcaacaatgtttcaaatttgatccaaaattactattttattttcatctaacaatgttc 12147860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 421
Target Start/End: Original strand, 20500678 - 20500775
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcat 421  Q
    |||||||||  |||| ||||||||| |||||||  ||||| ||||| ||||| || |||||||||| |||  ||| || |||||||||||||||||||    
T  20500678 tttttgtttacaacattaaaatcaagttaaaaatctaaaacacaacatattttcagcaatgtttcaaatttcatcaaatattacaatttcattttcat 20500775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 387
Target Start/End: Complemental strand, 892352 - 892233
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-ac 366  Q
    |||||||||| ||||||||||| | | || |||| ||||||| |||||||||  || |||||||||  |||| ||||||| | ||| |||||||||| ||    
T  892352 aaaccaatgtggtttgggttggattggttgatgcggtttttt-cgagacaatataattttttgttttcaacattaaaatcgagttagaaagttaaaacac 892254  T
Q  367 aacttatttccaacaatgttt 387  Q
    ||| |||||| | ||||||||    
T  892253 aacatatttctagcaatgttt 892233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 403
Target Start/End: Original strand, 6266995 - 6267097
Alignment:
Q  299 tgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatc 398  Q
    |||| |||||||||||||||| ||| |||||| ||  |||  ||||||||| || ||||||| ||||||||||||||  |||||||||| | ||| ||||    
T  6266995 tgcaattttttgcgagacaatgcaattttttgctttcaacgttaaaatcaagtt-aaaagtt-aaaacaacttatttttaacaatgttttaaatttgatc 6267092  T
Q  399 caaca 403  Q
    |||||    
T  6267093 caaca 6267097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 22413993 - 22414033
Alignment:
Q  396 atccaacattacaatttcattttcatccaacaacgttccca 436  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  22413993 atccaacattacaatttcattctcatccaacaatgttccca 22414033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 428
Target Start/End: Original strand, 11417203 - 11417291
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaa 428  Q
    |||||| || |||||||| ||||| ||||| ||||| || |||||||| | |||  |||||||||||| |||| ||||||||| |||||    
T  11417203 taaaataaaattaaaaagataaaacacaacatattttcagcaatgttttaaatttcatccaacattacgattttattttcatcgaacaa 11417291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 4e-24; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 280 - 421
Target Start/End: Complemental strand, 10778479 - 10778339
Alignment:
Q  280 tttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaa 379  Q
    ||||| |||||||| ||  || |||||||||| ||||||| ||  |||||||||  |||| |||| |||| |||||| |||||||||||||||| | |||    
T  10778479 tttggattggttcggttgttgtagttttttgcaagacaatacatatttttgttttcaacattaaagtcaagttaaaa-gttaaaaacaacttatattcaa 10778381  T
Q  380 caatgtttcagattggatccaacattacaatttcattttcat 421  Q
    |||||||||| ||| |||||||||||||||||| ||||||||    
T  10778380 caatgtttcaaatttgatccaacattacaattttattttcat 10778339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 303 - 416
Target Start/End: Original strand, 6101983 - 6102097
Alignment:
Q  303 gttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaa 401  Q
    ||||||| ||||||||| ||| |||||||||| |||||||||||||| |||||| | ||||| ||||| ||||| |||| |||||| | |||  ||||||    
T  6101983 gtttttttcgagacaatacaattttttgtttccaacagtaaaatcaagttaaaaggataaaacacaacatattttcaacgatgttttaaatttcatccaa 6102082  T
Q  402 cattacaatttcatt 416  Q
    |||||||||||||||    
T  6102083 cattacaatttcatt 6102097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 29232866 - 29232970
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaaa-caacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||||| |||| ||||||||| ||||| || |||||| |||| ||||| ||||||||||| | |||  ||||||||||||||||| ||||||||||    
T  29232866 tttttgtttccaacattaaaatcaaattaaacagctaaaaaacaacatattttcaacaatgttttaaatttcatccaacattacaattttattttcatcc 29232965  T
Q  424 aacaa 428  Q
    |||||    
T  29232966 aacaa 29232970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 23625848 - 23625755
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttc 433  Q
    ||||||||| |||||||||||||| ||||| ||||| ||||||||||| | |||  ||||||||||| ||||| ||||||||||||||| ||||    
T  23625848 taaaatcaaattaaaaagttaaaacacaacatattttcaacaatgttttaaatttaatccaacattataattttattttcatccaacaatgttc 23625755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 3349852 - 3349780
Alignment:
Q  356 aagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaa 428  Q
    ||||||||||| | |||||| ||||||||||| | ||| |||||||| |||||| ||||||||||||||||||    
T  3349852 aagttaaaaactatttattttcaacaatgttttaaatttgatccaactttacaaattcattttcatccaacaa 3349780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 360
Target Start/End: Complemental strand, 5122401 - 5122308
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcag-ttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagtt 360  Q
    |||||||||| || |||||||| ||| ||| ||  | |||||| ||||||||| ||| ||||||||||||||| ||||||||| ||||||||||    
T  5122401 aaaccaatgtggtctgggttggatcgatttgtgtggctttttttcgagacaatacaattttttgtttctaacattaaaatcaagttaaaaagtt 5122308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 17794276 - 17794369
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcatttt 418  Q
    |||| ||||| |||| ||||||||| ||||||||||||||  |||||||||  | |||| ||||| |||  ||| |||||||||||||||||||    
T  17794276 ttttggtttccaacattaaaatcaagttaaaaagttaaaattaacttatttttagcaatatttcaaatttcatcaaacattacaatttcatttt 17794369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 54273952 - 54273883
Alignment:
Q  354 aaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    ||||||||||| ||| |||||| ||||||||||||| |||  ||||||||||||||||| | ||||||||    
T  54273952 aaaagttaaaagcaatttattttcaacaatgtttcaaatttaatccaacattacaattttactttcatcc 54273883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 427
Target Start/End: Original strand, 21069173 - 21069277
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttc-agattggatccaacattacaatttcattttcatc 422  Q
    |||||||||  |||| ||||||||| |||||||| ||||| || || ||||| |||||||||||  | |||  ||||||||||||||||| |||||||||    
T  21069173 tttttgttttcaacattaaaatcaaattaaaaagctaaaacactacatattttcaacaatgtttttaaatttaatccaacattacaattttattttcatc 21069272  T
Q  423 caaca 427  Q
    |||||    
T  21069273 caaca 21069277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 27743334 - 27743430
Alignment:
Q  341 taaaatcaatttaaaaagttaaaaacaa-cttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttccca 436  Q
    ||||||||| |||||||| |||||  || | ||||| ||||||||||| | |||  ||||||||||||||||| ||||||| ||||||| |||||||    
T  27743334 taaaatcaaattaaaaagctaaaacaaagcatattttcaacaatgtttaaaatttcatccaacattacaattttattttcagccaacaatgttccca 27743430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 9058257 - 9058318
Alignment:
Q  304 ttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaa 365  Q
    |||||| ||||| ||| ||| ||||||||||||||| ||||| ||| |||||||||||||||    
T  9058257 ttttttacgagagaatacaattttttgtttctaacattaaaaccaagttaaaaagttaaaaa 9058318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 7764334 - 7764278
Alignment:
Q  373 tttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaac 429  Q
    ||||||| ||||||||| |||   ||||||||||||||||||||||||| |||||||    
T  7764334 tttccaagaatgtttcaaatttcttccaacattacaatttcattttcattcaacaac 7764278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 428
Target Start/End: Original strand, 8484801 - 8484895
Alignment:
Q  336 aacagtaaaatcaatttaaaaagttaaaa-acaa-cttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaa 428  Q
    |||| ||||||||| |||||||||||||| |||| | ||||| || |||||||| |  ||  ||||||||||||||||| |||| ||||||||||    
T  8484801 aacattaaaatcaaattaaaaagttaaaacacaaacatattttcagcaatgttttaacttttatccaacattacaattttatttccatccaacaa 8484895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 35233250 - 35233145
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||||  |||| ||||||||  |||||||||||||| ||| | | ||| |||||| |||| | |||  ||||||||||||||||||||| |||  |    
T  35233250 tttttgttttcaacattaaaatcaggttaaaaagttaaaacacagcatgttttcaacaaagttttatatttcatccaacattacaatttcattctcactc 35233151  T
Q  424 aacaac 429  Q
    ||||||    
T  35233150 aacaac 35233145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 429
Target Start/End: Original strand, 49640951 - 49641067
Alignment:
Q  313 agacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatt 411  Q
    ||||||| ||| ||||| |||| |||| ||||||||| ||||| |||||||| ||||| ||||| ||||||| |||   |||  |||| ||||| || ||    
T  49640951 agacaatacaattttttttttccaacattaaaatcaagttaaagagttaaaacacaacatattttcaacaatatttttaattttatcctacatt-cactt 49641049  T
Q  412 tcattttcatccaacaac 429  Q
    ||||||||||| ||||||    
T  49641050 tcattttcatcaaacaac 49641067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 23120269 - 23120173
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa 364  Q
    |||| ||||| ||||||||||| | | || |||||||||||| | |||| ||  |  |||||||||| |||| ||||||||  ||||||||||||||    
T  23120269 aaactaatgtggtttgggttggataggttcatgcagtttttttctagacgataaatttttttgtttccaacattaaaatcaggttaaaaagttaaaa 23120173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 428
Target Start/End: Complemental strand, 48653743 - 48653711
Alignment:
Q  396 atccaacattacaatttcattttcatccaacaa 428  Q
    ||||||||||||||||| |||||||||||||||    
T  48653743 atccaacattacaattttattttcatccaacaa 48653711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 23475082 - 23474959
Alignment:
Q  311 cgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaat 410  Q
    |||| |||| ||| |||||||||| |||| |||||| || |||||||| |||||||||| ||| ||||||||||||||| |||  ||||||||||| |      
T  23475082 cgaggcaatacaattttttgtttccaacattaaaattaagttaaaaagctaaaaacaacatatctccaacaatgtttcaaatttcatccaacattagaga 23474983  T
Q  411 ttcattttcatccaacaacgttcc 434  Q
    ||||||||||| |||||| |||||    
T  23474982 ttcattttcattcaacaatgttcc 23474959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 10847549 - 10847428
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-ac 366  Q
    |||||||||| ||||||||||| | | || |||||||||| ||| ||||||| ||| |||||||||| |||| |||||  || |||||||||||||| ||    
T  10847549 aaaccaatgtggtttgggttggattggttgatgcagttttctgctagacaatacaattttttgtttccaacattaaaacaaaattaaaaagttaaaacac 10847450  T
Q  367 aacttatttccaacaatgtttc 388  Q
    ||| ||||| ||||||||||||    
T  10847449 aacatattttcaacaatgtttc 10847428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 325 - 436
Target Start/End: Complemental strand, 26345013 - 26344901
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||| ||||| |||| ||||||||| |||||||||||||| ||||| ||||| || |||||||| | |||  ||||||||||||||||| ||||||||||    
T  26345013 ttttggtttccaacattaaaatcaaattaaaaagttaaaacacaacatattttcagcaatgttttaaatttcatccaacattacaattttattttcatcc 26344914  T
Q  424 aacaacgttccca 436  Q
    || || |||||||    
T  26344913 aataatgttccca 26344901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 21905375 - 21905454
Alignment:
Q  355 aaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttcc 434  Q
    |||||||||||||||||||||| || ||||||||| ||| ||||||||||| ||| ||| |||||||||||||| |||||    
T  21905375 aaagttaaaaacaacttatttctaataatgtttcaaatttgatccaacattgcaaattctttttcatccaacaatgttcc 21905454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 21907048 - 21907127
Alignment:
Q  355 aaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttcc 434  Q
    |||||||||||||||||||||||||  || ||| | ||| |||||||||||| || ||| |||||||||||||| |||||    
T  21907048 aaagttaaaaacaacttatttccaattatattttaaatttgatccaacattaaaaattctttttcatccaacaatgttcc 21907127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 418
Target Start/End: Complemental strand, 32910350 - 32910235
Alignment:
Q  304 ttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaac 402  Q
    |||||| |||||| || ||| |||||||||| |||| ||||||||| |||||||||| ||| ||||| ||||| ||||||||||| | |||  ||  ||     
T  32910350 tttttttcgagacgatacaattttttgtttccaacattaaaatcaagttaaaaagtttaaacacaacatattttcaacaatgttttaaatttcattaaat 32910251  T
Q  403 attacaatttcatttt 418  Q
    ||||||||||||||||    
T  32910250 attacaatttcatttt 32910235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 436
Target Start/End: Complemental strand, 40095375 - 40095264
Alignment:
Q  326 ttttgtttctaacagtaaaatcaatttaaaaagttaaaaa-caacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcca 424  Q
    ||||||||  |||| |||||| || |||||||| |||||  |||| ||||| ||||||||||| | |||  || |||||||||||||| |||||||||||    
T  40095375 ttttgttttcaacattaaaattaaattaaaaagctaaaacgcaacatattttcaacaatgttttaaatttcattcaacattacaattttattttcatcca 40095276  T
Q  425 acaacgttccca 436  Q
    |||| |||||||    
T  40095275 acaatgttccca 40095264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 436
Target Start/End: Original strand, 12973688 - 12973798
Alignment:
Q  327 tttgtttctaacagtaaaatcaatttaaaaagttaaaaa-caacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaa 425  Q
    |||||||  |||| ||||||||| ||||||||||||||  |||| |||||  | |||||||| | |||  ||||||||||||||||| |||||||| |||    
T  12973688 tttgtttacaacattaaaatcaaattaaaaagttaaaacgcaacatatttttagcaatgttttaaatttcatccaacattacaattttattttcattcaa 12973787  T
Q  426 caacgttccca 436  Q
    ||| |||||||    
T  12973788 caatgttccca 12973798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 346 - 424
Target Start/End: Original strand, 51231904 - 51231982
Alignment:
Q  346 tcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcca 424  Q
    |||| |||||||||||||||||||||||||  ||||| |||| | |||  ||||||||||||||||| |||||| ||||    
T  51231904 tcaagttaaaaagttaaaaacaacttatttttaacaacgttttaaatttcatccaacattacaattttattttcttcca 51231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 25865938 - 25865861
Alignment:
Q  352 taaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaa 428  Q
    |||| |||||||| |||||||||||||| |||||||| | |||  ||| ||||||| ||||| |||||||||||||||    
T  25865938 taaacagttaaaatacaacttatttccagcaatgttttaaatttcatctaacattaaaattttattttcatccaacaa 25865861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 35375332 - 35375381
Alignment:
Q  371 tatttccaacaatgtttcagattggatccaacattacaatttcattttca 420  Q
    ||||| ||||||||||| |||||  |||||||||||||||||||||||||    
T  35375332 tattttcaacaatgttttagattttatccaacattacaatttcattttca 35375381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 428
Target Start/End: Original strand, 3935593 - 3935681
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaa 428  Q
    ||||||||| |||| ||||||||| ||||| ||||  || |||||||| | |||  ||||||||||||||||| |||| ||||||||||    
T  3935593 taaaatcaaattaataagttaaaacacaacatattctcatcaatgttttaaatttcatccaacattacaattttatttccatccaacaa 3935681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 433
Target Start/End: Original strand, 6248215 - 6248307
Alignment:
Q  342 aaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttc 433  Q
    |||||||| |||||||| ||||| ||||  ||||| || |||||||| | |||  ||||||||||||||||| ||||||||| ||||| ||||    
T  6248215 aaaatcaaattaaaaagctaaaacacaatatattttcagcaatgttttaaatttaatccaacattacaattttattttcatcaaacaatgttc 6248307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 482
Target Start/End: Original strand, 7562512 - 7562552
Alignment:
Q  442 catgatggtcaatcttacaccgaagcagaccaacctcacac 482  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  7562512 catgatggtcaaacttacacccaagcagaccaacctcacac 7562552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 25507049 - 25507105
Alignment:
Q  377 caacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttc 433  Q
    ||||||||||| | |||  ||||||||||||||||| ||||||||||||||| ||||    
T  25507049 caacaatgttttaaattttatccaacattacaattttattttcatccaacaaagttc 25507105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 436
Target Start/End: Original strand, 34914249 - 34914361
Alignment:
Q  325 tttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||||||| || | ||||||||| |||||||  ||||| ||||| ||||| || |||||||| | |||  |||  || ||||||||| ||||||||||    
T  34914249 tttttgtttccaatattaaaatcaaattaaaaacctaaaacacaacatattttcagcaatgttttaaatttcatctgaccttacaattttattttcatcc 34914348  T
Q  424 aacaacgttccca 436  Q
    ||||| |||||||    
T  34914349 aacaatgttccca 34914361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 387
Target Start/End: Complemental strand, 6694332 - 6694270
Alignment:
Q  326 ttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgttt 387  Q
    ||||||||| |||| ||||||||| |||||||||||||| ||||| ||||| || ||||||||    
T  6694332 ttttgtttccaacattaaaatcaaattaaaaagttaaaacacaacatattttcagcaatgttt 6694270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 388
Target Start/End: Original strand, 8268717 - 8268827
Alignment:
Q  279 gtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttcc 377  Q
    ||||||||||| ||| ||  ||| |||| || | ||||||| ||| |||||||||  |||| ||||||||| |||||||| ||||| ||||| |||||||    
T  8268717 gtttgggttggatcggttggtgcggtttcttaccagacaatgcaattttttgtttacaacattaaaatcaagttaaaaagctaaaacacaacatatttcc 8268816  T
Q  378 aacaatgtttc 388  Q
    |  ||||||||    
T  8268817 agtaatgtttc 8268827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 426
Target Start/End: Complemental strand, 27770136 - 27770066
Alignment:
Q  356 aagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaac 426  Q
    ||||||| ||||||||||||  || ||||||| | ||| |||||||| ||| ||||| |||||||||||||    
T  27770136 aagttaataacaacttatttttaaaaatgttttaaatttgatccaacgttaaaattttattttcatccaac 27770066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 50310763 - 50310841
Alignment:
Q  356 aagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttcc 434  Q
    ||||||||||||| ||| || | || |||||||| ||| |||| ||||||||||||| | ||| ||||||||| |||||    
T  50310763 aagttaaaaacaatttactttccacgatgtttcaaatttgatctaacattacaattttacttttatccaacaatgttcc 50310841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 389
Target Start/End: Original strand, 3860452 - 3860485
Alignment:
Q  356 aagttaaaaacaacttatttccaacaatgtttca 389  Q
    |||||||||||||||||||| |||||||||||||    
T  3860452 aagttaaaaacaacttattttcaacaatgtttca 3860485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 25532876 - 25532933
Alignment:
Q  365 acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatc 422  Q
    ||||| ||||||||||||||||| | |||  ||| ||||||| |||||||||||||||    
T  25532876 acaacatatttccaacaatgttttaaatttcatcaaacattaaaatttcattttcatc 25532933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 32938100 - 32937980
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-ac 366  Q
    |||||||||| ||||||||||| ||| ||  | ||||||| | ||||| ||| ||| ||||||||||  ||| ||||||||| |||||||| ||||| ||    
T  32938100 aaaccaatgtggtttgggttggatcggttggtacagttttctccgagataatacaa-tttttgtttcctacattaaaatcaagttaaaaagctaaaacac 32938002  T
Q  367 aacttatttccaacaatgtttc 388  Q
    ||| |||||  | |||||||||    
T  32938001 aacatattttaagcaatgtttc 32937980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 39158197 - 39158160
Alignment:
Q  399 caacattacaatttcattttcatccaacaacgttccca 436  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  39158197 caacattacaatttcattttcatctaacaatgttccca 39158160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 428
Target Start/End: Original strand, 27350829 - 27350861
Alignment:
Q  396 atccaacattacaatttcattttcatccaacaa 428  Q
    ||||||||||||||||| |||||||||||||||    
T  27350829 atccaacattacaattttattttcatccaacaa 27350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 428
Target Start/End: Complemental strand, 32937960 - 32937928
Alignment:
Q  396 atccaacattacaatttcattttcatccaacaa 428  Q
    ||||||||||| |||||||||||||||||||||    
T  32937960 atccaacattaaaatttcattttcatccaacaa 32937928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 433
Target Start/End: Complemental strand, 17866 - 17790
Alignment:
Q  357 agttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttc 433  Q
    |||||||||||||||||||||| ||| |||||| |||  ||||||||||||||  ||||||||||||||||| ||||    
T  17866 agttaaaaacaacttatttccatcaacgtttcaaatttaatccaacattacaacctcattttcatccaacaatgttc 17790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 431
Target Start/End: Complemental strand, 32064070 - 32063998
Alignment:
Q  359 ttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgt 431  Q
    ||||||||||||||||| |||| ||||| ||||||  |||||||| |||||||||||||||||| ||||||||    
T  32064070 ttaaaaacaacttattttcaactatgttccagattttatccaacactacaatttcattttcatctaacaacgt 32063998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 435
Target Start/End: Original strand, 41346077 - 41346139
Alignment:
Q  373 tttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttccc 435  Q
    ||||||||||||||| | |||  |||||||||||||||||||||||||| |||||||||||||    
T  41346077 tttccaacaatgtttaaaattttatccaacattacaatttcattttcattcaacaacgttccc 41346139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 417
Target Start/End: Complemental strand, 29914576 - 29914467
Alignment:
Q  304 ttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaacaacttatttccaacaatgtttcagattggatccaaca 403  Q
    ||||||| |||||||| ||| ||||||||||||||| ||| ||||| || ||||| |||||||||||||||| ||||   || ||| ||| |||| ||||    
T  29914576 ttttttgtgagacaatacaattttttgtttctaacattaagatcaagtt-aaaagctaaaaacaacttattttcaac---gtctcaaatttgatctaaca 29914481  T
Q  404 ttacaatttcattt 417  Q
    ||||||||| ||||    
T  29914480 ttacaattttattt 29914467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 386
Target Start/End: Original strand, 45366373 - 45366490
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaaaca 367  Q
    |||||||||  |||||| ||||||||  |  |||| ||||||||||| |||| ||| |||||||||  |||  ||||||||| ||||||  |||||||||    
T  45366373 aaaccaatgcagtttggattggttcggctgttgcatttttttgcgagccaatacaa-tttttgttttcaacgttaaaatcaagttaaaagtttaaaaaca 45366471  T
Q  368 acttatttccaacaatgtt 386  Q
     ||||||| ||||||||||    
T  45366472 gcttattttcaacaatgtt 45366490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 30254065 - 30253969
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttccca 436  Q
    ||||||||| |||||| ||||||| ||||| ||||| ||||||||||| | |||  ||||||| |||||| ||  ||| |||||||||| |||||||    
T  30254065 taaaatcaaattaaaaggttaaaacacaacctattttcaacaatgttttaaatttcatccaactttacaaatttttttccatccaacaatgttccca 30253969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 426
Target Start/End: Original strand, 33566082 - 33566173
Alignment:
Q  336 aacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaac 426  Q
    |||| ||||||||| |||||||| ||||| ||||| ||||| ||  ||||||| | |||  ||||||||||| ||||| |||||||||||||    
T  33566082 aacactaaaatcaaattaaaaagctaaaacacaacatattttcagtaatgttttaaatttcatccaacattataattttattttcatccaac 33566173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 428
Target Start/End: Complemental strand, 9012854 - 9012696
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-ac 366  Q
    |||||||||  ||||||||||| ||| ||  ||| ||||||||  |||||||  || ||||||||||   |||||||||||| |||||||  ||||| ||    
T  9012854 aaaccaatgcggtttgggttggatcggttggtgcggttttttg--agacaatataattttttgtttccg-cagtaaaatcaagttaaaaaactaaaacac 9012758  T
Q  367 aacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaa 428  Q
    ||  ||||| ||| ||||||| | |||  ||| ||||||||||||| ||||| |||||||||    
T  9012757 aaaatattttcaataatgttttaaatttcatcgaacattacaattttatttttatccaacaa 9012696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 428
Target Start/End: Complemental strand, 18755285 - 18755187
Alignment:
Q  331 tttctaacagtaaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaa 428  Q
    |||| |||| ||||| ||| |||||||||||||| ||||| ||||| ||| ||| ||| | |||  ||| ||||||||||||||||||| ||| |||||    
T  18755285 tttccaacattaaaaccaaattaaaaagttaaaacacaacatattttcaaaaatattttaaatttcatcaaacattacaatttcatttttatctaacaa 18755187  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 12193411 - 12193318
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttc 433  Q
    ||||||||| |||||||| ||||| ||||| ||||| || |||||||| | |||  |||||||||||| |||  ||||||||| ||||| ||||    
T  12193411 taaaatcaaattaaaaagctaaaacacaacatattttcagcaatgttttaaattttatccaacattaccattatattttcatcgaacaatgttc 12193318  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 12437839 - 12437746
Alignment:
Q  341 taaaatcaatttaaaaagttaaaa-acaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatccaacaacgttc 433  Q
    ||||||||| |||||||| ||||| ||||| ||||| || |||||||| | |||  |||||||||||| |||  ||||||||| ||||| ||||    
T  12437839 taaaatcaaattaaaaagctaaaacacaacatattttcagcaatgttttaaattttatccaacattaccattatattttcatcgaacaatgttc 12437746  T

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Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 28073123 - 28073070
Alignment:
Q  370 ttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    |||||| ||||||||||| | ||| |||||||| ||||||||| ||||||||||    
T  28073123 ttattttcaacaatgttttaaatttgatccaacgttacaattttattttcatcc 28073070  T

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Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 35688352 - 35688283
Alignment:
Q  354 aaaagttaaaaacaacttatttccaacaatgtttcagattggatccaacattacaatttcattttcatcc 423  Q
    ||||||||||||||||||||||  |||||| ||| | | | |||| || |||||||||| ||||||||||    
T  35688352 aaaagttaaaaacaacttatttttaacaatattttaaacttgatcaaatattacaattttattttcatcc 35688283  T

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Target: scaffold0664 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 387
Target Start/End: Original strand, 6066 - 6186
Alignment:
Q  268 aaaccaatgttgtttgggttggttcgttttatgcagttttttgcgagacaatccaactttttgtttctaacagtaaaatcaatttaaaaagttaaaa-ac 366  Q
    |||||||||  ||||||||||| ||| ||| ||||||| ||  ||| ||||| ||| |||||||||  ||||  |||||||| |||||||| |||||  |    
T  6066 aaaccaatgcggtttgggttggatcggtttgtgcagttgttatcgaaacaattcaattttttgtttacaacatcaaaatcaaattaaaaagctaaaacgc 6165  T
Q  367 aacttatttccaacaatgttt 387  Q
    ||| || ||||||||||||||    
T  6166 aacatacttccaacaatgttt 6186  T

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