View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18211_low_4 (Length: 811)

Name: NF18211_low_4
Description: NF18211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18211_low_4
NF18211_low_4
[»] chr3 (15 HSPs)
chr3 (367-618)||(40496773-40497024)
chr3 (367-618)||(41346047-41346298)
chr3 (335-619)||(51545661-51545955)
chr3 (367-619)||(54014236-54014488)
chr3 (367-618)||(48169724-48169975)
chr3 (367-618)||(50676475-50676724)
chr3 (616-793)||(38482576-38482753)
chr3 (367-609)||(24709019-24709261)
chr3 (367-583)||(48737561-48737777)
chr3 (199-329)||(38482751-38482881)
chr3 (479-619)||(12568169-12568309)
chr3 (479-619)||(13544633-13544773)
chr3 (331-483)||(13542795-13542957)
chr3 (511-618)||(30459806-30459913)
chr3 (367-487)||(30462801-30462919)
[»] chr4 (24 HSPs)
chr4 (367-618)||(40071498-40071749)
chr4 (367-619)||(925185-925437)
chr4 (367-618)||(54438206-54438457)
chr4 (331-615)||(37064756-37065050)
chr4 (367-619)||(17493752-17494004)
chr4 (367-618)||(39787992-39788244)
chr4 (367-618)||(20789673-20789923)
chr4 (367-611)||(47199493-47199737)
chr4 (371-618)||(34408710-34408957)
chr4 (367-618)||(32217986-32218237)
chr4 (367-618)||(21240326-21240577)
chr4 (370-589)||(33800835-33801053)
chr4 (367-565)||(52101101-52101299)
chr4 (371-590)||(53509695-53509914)
chr4 (367-583)||(28910207-28910421)
chr4 (383-611)||(46870614-46870840)
chr4 (367-583)||(3172069-3172284)
chr4 (491-618)||(51744657-51744784)
chr4 (367-458)||(51744568-51744659)
chr4 (367-619)||(41555461-41555706)
chr4 (527-618)||(10441143-10441235)
chr4 (527-613)||(28690104-28690189)
chr4 (586-619)||(34408656-34408689)
chr4 (586-619)||(47199754-47199787)
[»] chr2 (22 HSPs)
chr2 (367-621)||(2110217-2110471)
chr2 (367-618)||(29193988-29194239)
chr2 (367-619)||(43370673-43370925)
chr2 (367-618)||(45080469-45080718)
chr2 (367-616)||(28585732-28585981)
chr2 (367-618)||(4828138-4828389)
chr2 (367-591)||(8381365-8381589)
chr2 (367-618)||(1779121-1779372)
chr2 (399-618)||(42846990-42847207)
chr2 (367-506)||(9370486-9370625)
chr2 (426-583)||(39646437-39646591)
chr2 (367-535)||(43377257-43377423)
chr2 (367-473)||(16970301-16970405)
chr2 (511-619)||(25898462-25898570)
chr2 (511-619)||(31922032-31922140)
chr2 (367-422)||(30422588-30422643)
chr2 (497-582)||(16964852-16964937)
chr2 (367-475)||(31921670-31921776)
chr2 (367-433)||(25898766-25898832)
chr2 (586-618)||(8381316-8381348)
chr2 (586-618)||(31921621-31921653)
chr2 (378-438)||(39646366-39646426)
[»] chr8 (13 HSPs)
chr8 (328-621)||(38069895-38070198)
chr8 (367-618)||(11254500-11254751)
chr8 (367-618)||(27820773-27821024)
chr8 (335-618)||(17493526-17493819)
chr8 (335-621)||(18575025-18575321)
chr8 (367-618)||(39906911-39907159)
chr8 (367-615)||(12738415-12738663)
chr8 (378-618)||(17336030-17336270)
chr8 (367-621)||(9753767-9754020)
chr8 (367-583)||(13243596-13243811)
chr8 (511-618)||(11146770-11146877)
chr8 (367-487)||(11147782-11147900)
chr8 (586-619)||(11254768-11254801)
[»] chr7 (16 HSPs)
chr7 (367-619)||(4040946-4041198)
chr7 (367-618)||(29737405-29737656)
chr7 (367-618)||(40232164-40232415)
chr7 (367-618)||(6392271-6392522)
chr7 (367-618)||(27596135-27596385)
chr7 (335-616)||(25943656-25943943)
chr7 (367-618)||(41427697-41427948)
chr7 (367-618)||(31689402-31689653)
chr7 (367-619)||(38276594-38276846)
chr7 (367-619)||(24300203-24300445)
chr7 (367-618)||(21442849-21443098)
chr7 (380-583)||(48838095-48838296)
chr7 (511-618)||(22337710-22337818)
chr7 (367-462)||(22338126-22338219)
chr7 (367-487)||(22619883-22620001)
chr7 (511-618)||(22619524-22619631)
[»] chr5 (9 HSPs)
chr5 (367-619)||(36982185-36982437)
chr5 (335-619)||(14044055-14044348)
chr5 (367-584)||(42897423-42897640)
chr5 (367-618)||(2970715-2970964)
chr5 (511-619)||(33403193-33403301)
chr5 (378-475)||(36767936-36768031)
chr5 (367-484)||(33404365-33404480)
chr5 (367-434)||(5712600-5712667)
chr5 (511-618)||(36768782-36768889)
[»] scaffold0519 (2 HSPs)
scaffold0519 (367-618)||(10642-10893)
scaffold0519 (586-619)||(10592-10625)
[»] chr1 (13 HSPs)
chr1 (367-618)||(32045833-32046084)
chr1 (367-619)||(46862555-46862807)
chr1 (367-618)||(38321645-38321896)
chr1 (367-618)||(1929266-1929516)
chr1 (367-618)||(39150946-39151197)
chr1 (367-618)||(28036749-28037001)
chr1 (367-619)||(46370926-46371172)
chr1 (367-618)||(50776997-50777248)
chr1 (367-618)||(8229063-8229315)
chr1 (367-619)||(1207501-1207751)
chr1 (367-619)||(40562485-40562735)
chr1 (405-615)||(38817777-38817984)
chr1 (367-595)||(9129450-9129679)
[»] chr6 (14 HSPs)
chr6 (367-618)||(28541636-28541887)
chr6 (367-618)||(29182591-29182842)
chr6 (367-618)||(1241109-1241359)
chr6 (367-619)||(12350271-12350523)
chr6 (367-618)||(30736419-30736670)
chr6 (372-618)||(13041972-13042217)
chr6 (367-618)||(16435779-16436026)
chr6 (367-622)||(7271127-7271383)
chr6 (367-583)||(31013544-31013760)
chr6 (370-583)||(1870569-1870780)
chr6 (367-566)||(13210396-13210592)
chr6 (500-609)||(31833747-31833856)
chr6 (367-475)||(31833640-31833743)
chr6 (586-621)||(16436043-16436078)
[»] scaffold0061 (1 HSPs)
scaffold0061 (367-618)||(10066-10317)
[»] scaffold0047 (1 HSPs)
scaffold0047 (367-618)||(69753-70004)
[»] scaffold0318 (1 HSPs)
scaffold0318 (421-618)||(16357-16554)
[»] scaffold0532 (1 HSPs)
scaffold0532 (367-598)||(3834-4065)
[»] scaffold0016 (2 HSPs)
scaffold0016 (367-495)||(92218-92346)
scaffold0016 (572-619)||(92374-92421)
[»] scaffold1194 (1 HSPs)
scaffold1194 (378-583)||(1014-1208)


Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-106; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 40497024 - 40496773
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  40497024 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 40496925  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  40496924 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgtttagaaatctgagaaggtcaagtattg 40496825  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  40496824 tgggacaaatattttttacaaataggtcacttattcaaggacggagggagta 40496773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 41346298 - 41346047
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||    
T  41346298 ttaagaaaagtgtaaagatgaaagaaagtaagtgatacttttactgagttgcccttgtcattattttaaaactttttcacttttaagtaatgattacttt 41346199  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  41346198 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattg 41346099  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  41346098 tgggacaaatattttttacaaataggtcacttattcagggacggagggagta 41346047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 335 - 619
Target Start/End: Complemental strand, 51545955 - 51545661
Alignment:
Q  335 tccgtccttgaataagtgacctatttgatcattt----------aagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgt 424  Q
    ||||||| ||||||||||||||||||||||||||          |||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  51545955 tccgtccctgaataagtgacctatttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgt 51545856  T
Q  425 cattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaa 524  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||| |||||||||| ||||||||||| |||||    
T  51545855 cattattttgaaactttttcacttttaagtaatgattactttttttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaa 51545756  T
Q  525 tctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  51545755 tctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaggaacggagggagtaa 51545661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 367 - 619
Target Start/End: Complemental strand, 54014488 - 54014236
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||| |||    
T  54014488 ttaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaataattacttt 54014389  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  54014388 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattg 54014289  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    | |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  54014288 tgggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 54014236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 48169975 - 48169724
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||    
T  48169975 ttaagaaaagtgtaaagataaaagaaagagagtgatactattactgagctgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 48169876  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||     
T  48169875 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataagggataaatctgtcaaattttgcttagaaatctgagaaggtcaagtatta 48169776  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  48169775 tgggacaaatattttttacaaataggtcacttattcagagacggagggagta 48169724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 50676724 - 50676475
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||    
T  50676724 ttaagaaaagtgtaaagataaaagaaagagagtgatatttttactgagttg-ccttgtcattattttaaaactttttcacttttaagtaatgattacttt 50676626  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  50676625 ctttgttccactacaaactttaacatggga-ccacaaaaagtatttataaggggtaaatctgtcaaattttgcttaaaaatctgagaaggtcaagtattg 50676527  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  50676526 tgggacaaatattttttacaaataggtcacttattcagggacggagggagta 50676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 616 - 793
Target Start/End: Complemental strand, 38482753 - 38482576
Alignment:
Q  616 gtaacactatacgaactaatatcgtgaataaatcctcaaatccaacaaccatcactatcttacatcacaatcggcaaaccgactttgcacccctttaaaa 715  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38482753 gtaacattatatgaactaatatcgtgaataaatcctcaaatccaacaaccatcactatcttacatcacaatcggcaaaccgactttgcacccctttaaaa 38482654  T
Q  716 acagaatcattaatatgacacttagatcactcaattaaaagacgttttcaatgaatacatgtaaattgatattagata 793  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38482653 acagaatcattaatacgacacttagatcactcaattaaaagacgttttcaatgaatacatgtaaattgatattagata 38482576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 367 - 609
Target Start/End: Complemental strand, 24709261 - 24709019
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||    
T  24709261 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaattttttcacttttaagtaatgattacttt 24709162  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    ||||||| |  |||||||||||||||| | |||||||||| ||||||||| |  |||||||||||||||||| ||| ||||||||||||||||| |||||    
T  24709161 ctttgtttcactacaaactttaacatgaggaccacaaaaagtatttataaaggataaatctgtcaaattttgcttataaatctgagaaggtcaagtattg 24709062  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacg 609  Q
    | |||||||||||||||| |||||| |||||||||||||||||    
T  24709061 tgggacaaatattttttacaaataggtcacttattcagggacg 24709019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 367 - 583
Target Start/End: Complemental strand, 48737777 - 48737561
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||| |||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48737777 ttaagaaaagtgtagagatgaaagaaagaaaatgatatttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattatttt 48737678  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||| | |||||| ||||||||| || ||| |||||||| ||| |||| ||||     
T  48737677 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaagggtaaatttgtcaaattctgcttaaaaatctgaaaagatcaagtatta 48737578  T
Q  567 taggacaaatatttttt 583  Q
    || ||||||||||||||    
T  48737577 taagacaaatatttttt 48737561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 199 - 329
Target Start/End: Complemental strand, 38482881 - 38482751
Alignment:
Q  199 aaatttagttttggacagtacaactannnnnnnaagttgcacgacgatttaagagttacaagcaaccaccaaataatgtgttcgacatgccacgtaacat 298  Q
    ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38482881 aaatttatttttggacagtacaactatttttttaagttgcacgacgatttaagagttacaagcaaccaccaaataatgtgttcgacatgccaggtaacat 38482782  T
Q  299 tgagagctaaatccataattctaatttggta 329  Q
    |||||||||||||||||||||||||||||||    
T  38482781 tgagagctaaatccataattctaatttggta 38482751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 479 - 619
Target Start/End: Original strand, 12568169 - 12568309
Alignment:
Q  479 acaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatat 578  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |||||| ||||||||||    
T  12568169 acaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaagtcaagtattgtgggacaaatat 12568268  T
Q  579 tttttataaatagatcacttattcagggacggagggagtaa 619  Q
    |||||| |||||  |||||||||||||||||||||||||||    
T  12568269 tttttacaaatatgtcacttattcagggacggagggagtaa 12568309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 479 - 619
Target Start/End: Original strand, 13544633 - 13544773
Alignment:
Q  479 acaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatat 578  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |||||| ||||||||||    
T  13544633 acaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaagtcaagtattgtgggacaaatat 13544732  T
Q  579 tttttataaatagatcacttattcagggacggagggagtaa 619  Q
    |||||| |||||  |||||||||||||||||||||||||||    
T  13544733 tttttacaaatatgtcacttattcagggacggagggagtaa 13544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 331 - 483
Target Start/End: Original strand, 13542795 - 13542957
Alignment:
Q  331 tccatccgtccttgaataagtgacctatttgatcattt----------aagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtcc 420  Q
    ||||||||||| |||||||||||||||||||| |||||          |||||||| |||||||||||||||||| | ||||||||||||||||||| ||    
T  13542795 tccatccgtccctgaataagtgacctatttgaccatttcatatagattaagaaaagtgtaaagatgaaagaaagagattgatacttttactgagttgccc 13542894  T
Q  421 ttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaa 483  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||| || ||||||    
T  13542895 ttgtcattattttaaaactttttcacttttaagtaatgattactttctttgtttcgctacaaa 13542957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 511 - 618
Target Start/End: Complemental strand, 30459913 - 30459806
Alignment:
Q  511 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 610  Q
    |||||||| |||||  |||||||||||| ||  |||| |||||||||||| ||||   |||||| | ||||||| |||||| ||||||||||||||||||    
T  30459913 ttataaggggtaaaattgtcaaattttgctttaaaatttgagaaggtcaagtatttagggacaatttttttttacaaataggtcacttattcagggacgg 30459814  T
Q  611 agggagta 618  Q
    ||||||||    
T  30459813 agggagta 30459806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 30462919 - 30462801
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    ||||||||||  ||||||||||||||| | ||||||| ||||||||| ||| |||| | |||||||| ||||   ||||||||||| |||| |||| |||    
T  30462919 ttaagaaaagtataaagatgaaagaaatagagtgatatttttactgaattgcccttattattatttttaaac--cttcacttttaaataataattacttt 30462822  T
Q  467 ctttgttccgttacaaacttt 487  Q
      |||||||  ||||||||||    
T  30462821 aattgttccactacaaacttt 30462801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 40071498 - 40071749
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||    
T  40071498 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagcaatgattacttt 40071597  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  40071598 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattg 40071697  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  40071698 tgggacaaatattttttacaaataggtcacttattcagggacggagggagta 40071749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 367 - 619
Target Start/End: Original strand, 925185 - 925437
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  925185 ttaagaaaagtgtaaagataaaagaaataaagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 925284  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  925285 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattg 925384  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    ||||| |||||||||||| |||||| |||||||||||||||||| ||||||||    
T  925385 taggataaatattttttacaaataggtcacttattcagggacggtgggagtaa 925437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 54438206 - 54438457
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||    
T  54438206 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttaaaactttttcacttttaagtaatgattacttt 54438305  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |||| |||||    
T  54438306 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaagtattg 54438405  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  54438406 tgggacaaatattttttacaaataggtcacttattcagggacggagggagta 54438457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 331 - 615
Target Start/End: Original strand, 37064756 - 37065050
Alignment:
Q  331 tccatccgtccttgaataagtgacctatttgatcattt----------aagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtcc 420  Q
    ||||||||||| ||||||||||||||||||||||||||          |||||||| |||||||||||||||||| ||||||||||||||||||||| ||    
T  37064756 tccatccgtccctgaataagtgacctatttgatcatttcacatagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgccc 37064855  T
Q  421 ttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggag 520  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| | |||||||||| ||||||||||| |    
T  37064856 ttgtcatttttttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatgaggaccacaaaaagtatttataagggg 37064955  T
Q  521 taaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggaggga 615  Q
    ||||| |||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| |||||  |||||||||||||||||||||||    
T  37064956 taaatatgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataagtcacttattcagggacggaggga 37065050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 367 - 619
Target Start/End: Complemental strand, 17494004 - 17493752
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17494004 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttattgagttgcccttgtcattattttgaaactttttcacttttaagtaataattatttt 17493905  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||| |||| |||||    
T  17493904 ctttgttccactacaaactttaacatggggaccacaaaaagtttttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaagtattg 17493805  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    |  ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  17493804 tgagacaaatattttttacaaataggtcacttattcagggacggagggagtaa 17493752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 39788244 - 39787992
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  39788244 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 39788145  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||||| |||||    
T  39788144 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattg 39788045  T
Q  567 taggacaaatatt-ttttataaatagatcacttattcagggacggagggagta 618  Q
    | | ||||||||| ||||| |||||| ||||||||| || |||||||||||||    
T  39788044 tggaacaaatatttttttacaaataggtcacttatttagagacggagggagta 39787992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 20789923 - 20789673
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20789923 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagctg-ccttgtcattattttgaaactttttcacttttaagtaatgattatttt 20789825  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||  |||||||||||||||| |||| ||||     
T  20789824 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataagggataaatctgtcaaattttacttagaaatctgagaagatcaagtatta 20789725  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  20789724 tgggacaaatattttttacaaatagatcatttattcagggacggagagagta 20789673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 367 - 611
Target Start/End: Complemental strand, 47199737 - 47199493
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  47199737 ttaagaaaagtgtaaagatgaaagaaagagagtgatatttttattgagttgcccttgtcattattttaaaactttttcacttttaagtaatgattatttt 47199638  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| |||||||| || |||||||||| ||||||||  |||||||||||||||||||| |||||    
T  47199637 ctttgttccactacaaactttaacatggggaccacaaaaagtatttatatggggtaaatctgttaaattttgcctagaaatctgagaaggtcaagtattg 47199538  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacgga 611  Q
    | |||||||||||||||| |||||| ||||||||||| |||||||    
T  47199537 tgggacaaatattttttacaaataggtcacttattcacggacgga 47199493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 371 - 618
Target Start/End: Original strand, 34408710 - 34408957
Alignment:
Q  371 gaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttcttt 470  Q
    |||||| |||||||||||||||||| | ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34408710 gaaaagtgtaaagatgaaagaaagagaatgatacttttattgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattattttcttt 34408809  T
Q  471 gttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtagg 570  Q
    |||    |||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||   |||||||||||||||||||| |||| | ||    
T  34408810 gttatactacaaactttaacatgtggaccacaaaaagtatttataaggggtaaatctgtcaaattttacctagaaatctgagaaggtcaagtattatggg 34408909  T
Q  571 acaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34408910 acaaatattttttacaaataggtcacttattcagggacggagggagta 34408957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 32217986 - 32218237
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    ||||||| || |||||||||||||||||| | | ||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32217986 ttaagaagagtgtaaagatgaaagaaagagaattatatttttactgaatagtccttgtcattattttgaaactttttcacttttaagtaatgattacttt 32218085  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||| |||||||||||  |||| ||||     
T  32218086 ctttgttccactacaaactttaacatgggaaccacaaaaagtatttataaggggtaaatctgtcaaattctgcttaaaaatctgagaaaatcaagtatta 32218185  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    |||||||||||||||||  |||||| | |  |||| |||||||||| |||||    
T  32218186 taggacaaatatttttttcaaataggtgaagtattgagggacggagagagta 32218237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 21240577 - 21240326
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||| |||||||||||||| | ||||| ||||||||| ||| | |||||| |||||||||||||||||| |||||||||||||||| |||    
T  21240577 ttaagaaaagtgtagagatgaaagaaagagaatgatatttttactgaattgacattgtcactattttgaaactttttcatttttaagtaatgattacttt 21240478  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| |||||||| || |||||||||||||||| |  |||||| |||||||||||||| ||||     
T  21240477 ctttgttccactacaaactttaacatggggaccacaaaaagtatttatatggggtaaatctgtcaaattctacttagaagtctgagaaggtcaagtatta 21240378  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||  |||||| |||  |||| ||||||||||||||||    
T  21240377 tgggacaaatatttttttcaaataggtcaagtattgagggacggagggagta 21240326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 370 - 589
Target Start/End: Original strand, 33800835 - 33801053
Alignment:
Q  370 agaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttctt 469  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  33800835 agaaaagtgtaaagatggaagaaagagagtgatacttttactgagttgcccttgtcatcattttgaaactttttcacttttaaataatgattactttctt 33800934  T
Q  470 tgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtag 569  Q
    ||||||  |||||||||||| ||||| ||||| |||| ||||||||||  ||||||||||||||||||  ||||||||||||||||||||| |||| |||    
T  33800935 tgttccactacaaactttaatatggggaccac-aaaagtatttataagaggtaaatctgtcaaattttacttagaaatctgagaaggtcaagtattatag 33801033  T
Q  570 gacaaatattttttataaat 589  Q
     |||||||||||||| ||||    
T  33801034 aacaaatattttttacaaat 33801053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 367 - 565
Target Start/End: Complemental strand, 52101299 - 52101101
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||| | | ||||| ||||||||| |||  |||||||||||||||||| |||||||||||||||||||| |||||||    
T  52101299 ttaagaaaagtgtaaagatgaaagaaatataatgatatttttactgaattgcacttgtcattattttgaaattttttcacttttaagtaatggttatttt 52101200  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatatt 565  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  52101199 ctttgttccactacaaactttaacatgggaaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttataaatctgagaaggtcgaatatt 52101101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 371 - 590
Target Start/End: Original strand, 53509695 - 53509914
Alignment:
Q  371 gaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttcttt 470  Q
    |||||| |||||||||||||||| | | ||||| | ||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  53509695 gaaaagtgtaaagatgaaagaaaaagaatgatattgttactgaattgtcattgtcattattttgaaactttttcacttttaaataatgattattttcttt 53509794  T
Q  471 gttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtagg 570  Q
    |||||  |||||| ||||||||||| | |||||||| |||||||||||| ||||| ||||||||| |  |||||||||||| ||||||||||||||| |     
T  53509795 gttccactacaaattttaacatggggatcacaaaaagtatttataaggaataaatatgtcaaattctccttagaaatctgataaggtcaaatattgtgga 53509894  T
Q  571 acaaatattttttataaata 590  Q
    ||||||||||||| ||||||    
T  53509895 acaaatattttttctaaata 53509914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 367 - 583
Target Start/End: Original strand, 28910207 - 28910421
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||  | |||||||||||||||| | ||||| ||||||||| |||||||||| ||||||||||||| ||  ||||||||||||||||||| |||    
T  28910207 ttaagaaaaatgcaaagatgaaagaaagagaatgatatttttactgaattgtccttgttattattttgaaacctt--cacttttaagtaatgattacttt 28910304  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  || ||||||| |||||| ||||||||||| ||||||||||| |||||| ||||||||| || ||| |||||||||||||| ||||| ||    
T  28910305 ctttgttccactagaaacttttacatggaaaccacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaaggttaaatactg 28910404  T
Q  567 taggacaaatatttttt 583  Q
    ||| |||||||||||||    
T  28910405 tagaacaaatatttttt 28910421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 383 - 611
Target Start/End: Complemental strand, 46870840 - 46870614
Alignment:
Q  383 gatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaa 482  Q
    ||||||||||||| | ||||| ||||||||| | |||||||| ||||||||||||| ||  ||||||||||||||||| | ||||||||||||  |||||    
T  46870840 gatgaaagaaagagaatgatatttttactgaatagtccttgttattattttgaaacctt--cacttttaagtaatgatgactttctttgttccactacaa 46870743  T
Q  483 actttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttt 582  Q
    ||||| ||||||| |||||||||| |||||||||||  ||||| ||||||||| |  ||| ||||||||| ||||||| |||||| ||||||||||||||    
T  46870742 acttttacatggggaccacaaaaagtatttataagggataaatttgtcaaattgtacttaaaaatctgagcaggtcaagtattgtgggacaaatattttt 46870643  T
Q  583 tataaatagatcacttattcagggacgga 611  Q
    | ||||||| |||  |||| |||||||||    
T  46870642 tctaaataggtcaagtattgagggacgga 46870614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 367 - 583
Target Start/End: Original strand, 3172069 - 3172284
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtca-ttattttgaaactttttcacttttaagtaatgattattt 465  Q
    |||||||||  |||||||||||| ||||| | ||||| ||||||||| |||||||||| | |||||||||||| ||  ||||||||||||||||||| ||    
T  3172069 ttaagaaaaatgtaaagatgaaaaaaagataatgatatttttactgaattgtccttgttaattattttgaaacctt--cacttttaagtaatgattactt 3172166  T
Q  466 tctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatatt 565  Q
    ||||||||||  |||||||||| |||| |  |||||||||| |||||||||   |||||| ||||||||| || |||||||| |||||| ||||| ||||    
T  3172167 tctttgttccactacaaacttttacattgagaccacaaaaagtatttataaaaggtaaatttgtcaaattctgcttagaaatttgagaaagtcaagtatt 3172266  T
Q  566 gtaggacaaatatttttt 583  Q
    || |||||||||||||||    
T  3172267 gtgggacaaatatttttt 3172284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 491 - 618
Target Start/End: Original strand, 51744657 - 51744784
Alignment:
Q  491 atgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaata 590  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||||| |||||||||||||||| |||||    
T  51744657 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaata 51744756  T
Q  591 gatcacttattcagggacggagggagta 618  Q
    | ||||||||| ||||||||||||||||    
T  51744757 ggtcacttatttagggacggagggagta 51744784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 367 - 458
Target Start/End: Original strand, 51744568 - 51744659
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatg 458  Q
    |||||||||| |||||||||  ||||||| ||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  51744568 ttaagaaaagtgtaaagatgtgagaaagagagtgatacttttactaagttgcccttgtcattattttgaaacttgttcacttttaagtaatg 51744659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 367 - 619
Target Start/End: Complemental strand, 41555706 - 41555461
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||||||||||||||  |||  ||||| ||||||||| ||||| ||   |||||||| |||| ||  |  |||||||||||||||| |||    
T  41555706 ttaagaaaagtgtaaagatgaaaga--gaa--tgatatttttactgaattgtcatt---attatttttaaaccttcacttttttaagtaatgattacttt 41555614  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    ||||||| |  |||||||||| |||| |  |||||||||| ||  ||||||| |||||  |||||||||  | ||| |||| |||||||||||| |||||    
T  41555613 ctttgtttcactacaaacttttacatagagaccacaaaaagtaactataaggggtaaacttgtcaaattaagcttaaaaatttgagaaggtcaattattg 41555514  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
      |||||||| ||||||  |||||| |||  ||||  ||||||||||||||||    
T  41555513 cgggacaaattttttttccaaataggtcaagtattgcgggacggagggagtaa 41555461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 527 - 618
Target Start/End: Complemental strand, 10441235 - 10441143
Alignment:
Q  527 tgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatatttttt-ataaatagatcacttattcagggacggagggagta 618  Q
    |||||||||||| ||  |||| |||||||||||| |||| | |||||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  10441235 tgtcaaattttgctttaaaatttgagaaggtcaagtattttgggacaaatttttttttacaaataggtcacttattcagggacggagggagta 10441143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 527 - 613
Target Start/End: Original strand, 28690104 - 28690189
Alignment:
Q  527 tgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggagg 613  Q
    |||||||||||| ||  |||| ||||||||||||||||| |  ||| ||| ||||||| |||||  ||| |||||||||||||||||    
T  28690104 tgtcaaattttgctttaaaatttgagaaggtcaaatattttgcgac-aattttttttacaaatatgtcagttattcagggacggagg 28690189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 619
Target Start/End: Complemental strand, 34408689 - 34408656
Alignment:
Q  586 aaatagatcacttattcagggacggagggagtaa 619  Q
    |||||| |||||||||||||||||||||||||||    
T  34408689 aaataggtcacttattcagggacggagggagtaa 34408656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 619
Target Start/End: Original strand, 47199754 - 47199787
Alignment:
Q  586 aaatagatcacttattcagggacggagggagtaa 619  Q
    |||||||||||||||||||| |||||||||||||    
T  47199754 aaatagatcacttattcaggtacggagggagtaa 47199787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 367 - 621
Target Start/End: Complemental strand, 2110471 - 2110217
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  2110471 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 2110372  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
     ||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||||| |||||    
T  2110371 ttttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattg 2110272  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaaca 621  Q
    | |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  2110271 tgggacaaatattttttacaaataggtcacttattcagggacggagggagtaaca 2110217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 29194239 - 29193988
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29194239 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattatttt 29194140  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  ||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  29194139 ctttgttccactacaaactttaacatcgggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattg 29194040  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | ||||| || ||||||| |||||| ||||||||||||||||||||||||||    
T  29194039 tgggacacattttttttacaaataggtcacttattcagggacggagggagta 29193988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 367 - 619
Target Start/End: Complemental strand, 43370925 - 43370673
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  43370925 ttaagaaaagtgtaaaaataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 43370826  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||| |||||    
T  43370825 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctaagaaggtcaagtattg 43370726  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    | |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  43370725 tgggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 43370673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 45080469 - 45080718
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  45080469 ttaagaaaagtgtaaagatgaaagaaaga--gtgatacttttactgagttgcccttatcattatgttgaaactttttcacttttaagtaatgattatttt 45080566  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  45080567 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattg 45080666  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  45080667 tgggacaaatattttttacaaataggtcacttattcagggacggagggagta 45080718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 367 - 616
Target Start/End: Original strand, 28585732 - 28585981
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  28585732 ttaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 28585831  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||| || |||||    
T  28585832 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttagaaatctgagaaggttaagtattg 28585931  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggag 616  Q
    | ||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  28585932 tgggataaatattttttacaaataggtcacttattcagggacggagggag 28585981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 4828138 - 4828389
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  4828138 ttaagaaaagtgtaaagataaaagaaaaagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 4828237  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  || ||||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||    
T  4828238 ctttgttccactataaactttaacatggggaccacaaaaagtatttataaggggtaaatttgtcaaattttgcttagaaatttgagaaggtcaaatattg 4828337  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||  ||||||||| ||||||||||||||||    
T  4828338 tgggacaaatattttttacaaatatgtcacttattgagggacggagggagta 4828389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 367 - 591
Target Start/End: Original strand, 8381365 - 8381589
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||  |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||    
T  8381365 ttaagaaaaatgtaaagatgaaagaaatagagtgatacttttactgagttgcccttgtcattattttgaaactttttcatttttaagtaatgattacttt 8381464  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||| |||||||||   |||||||||| ||||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||| |    
T  8381465 ctttgttccactacaaattttaacatgaagaccacaaaaagtatttataaggggtaaatctgtcaaattttatttagaaatttgagaaggtcaagtatcg 8381564  T
Q  567 taggacaaatattttttataaatag 591  Q
    | |||||||||||||||| ||||||    
T  8381565 tgggacaaatattttttacaaatag 8381589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 1779121 - 1779372
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| | ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  1779121 ttaagaaaagtgtaaagatgaaagaaagataatgatatttttactgaattgtctttgtcattattttgaaactttttcacttttaagtaatgattacttt 1779220  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||| ||||  |||||||||||||||||| |||||||||| ||||||||| | |||||||||| ||||| || |||||||||||||||| |||   ||||    
T  1779221 ctttattccactacaaactttaacatggggaccacaaaaagtatttataaagggtaaatctgttaaattctgcttagaaatctgagaagatcaggcattg 1779320  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | ||||||||||||| | | ||||| |||  |||| ||||||||||||||||    
T  1779321 tgggacaaatattttcttttaataggtcaagtattgagggacggagggagta 1779372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 399 - 618
Target Start/End: Original strand, 42846990 - 42847207
Alignment:
Q  399 tgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaac 498  Q
    ||||| ||||||| | |||||||||| ||||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||||| ||||||  |     
T  42846990 tgatatttttactaaattgtccttgttattattttgaaa--tcttcacttttaagtaatgattattttctttgttccattacaaacttttacatggagaa 42847087  T
Q  499 cacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcactt 598  Q
    |||||||| ||||||||||| |||||| ||||||||| || ||| |||||||| |||||||| |||| | |||||||||||||||  |||||| |||  |    
T  42847088 cacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgaaaaggtcaagtattatgggacaaatatttttttcaaataggtcaaat 42847187  T
Q  599 attcagggacggagggagta 618  Q
    ||| | ||||||||| ||||    
T  42847188 attaaaggacggaggtagta 42847207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 367 - 506
Target Start/End: Complemental strand, 9370625 - 9370486
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||| ||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9370625 ttaagaaaagtgtaaagatgaaaaaaagaaaatgatttttttactgaattgtccttgtcattattttgaaactttttcacttttaagtaatgattacttt 9370526  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaa 506  Q
    ||||||| |  |||||||||||| ||||| | ||||||||    
T  9370525 ctttgtttcactacaaactttaatatggggatcacaaaaa 9370486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 426 - 583
Target Start/End: Original strand, 39646437 - 39646591
Alignment:
Q  426 attattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaat 525  Q
    ||||||||||||| ||  ||||||||||||||||||| ||| ||||||||  |||||||||| ||||| | |||||||||| ||||||||||| ||||||    
T  39646437 attattttgaaacctt--cacttttaagtaatgattacttt-tttgttccactacaaacttttacatgaggaccacaaaaagtatttataaggggtaaat 39646533  T
Q  526 ctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatatttttt 583  Q
     ||||||||| | |||||||||||||||| |||||||||||| |||||||||||||||    
T  39646534 ttgtcaaattctatttagaaatctgagaatgtcaaatattgtgggacaaatatttttt 39646591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 367 - 535
Target Start/End: Original strand, 43377257 - 43377423
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||||||||   ||||||||||||||||||||| |||    
T  43377257 ttaagaaaagtgtaaagatgaaagaaagaaaatgatacttttactgaattgtacttgttattattttgaaac--cttcacttttaagtaatgattacttt 43377354  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaatt 535  Q
    |||||||||  |||||||||| || |||  || ||||||| ||||||||||   ||||| |||||||||    
T  43377355 ctttgttccactacaaacttttacttggagactacaaaaagtatttataagagataaatttgtcaaatt 43377423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 367 - 473
Target Start/End: Complemental strand, 16970405 - 16970301
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| | ||||| ||||||||| ||| |||| | |||||||| |||| ||  ||||||||||||||||||| |||    
T  16970405 ttaagaaaagtgtaaagataaaagaaagataatgatatttttactgaattgcccttattattatttttaaacctt--cacttttaagtaatgattacttt 16970308  T
Q  467 ctttgtt 473  Q
    |||||||    
T  16970307 ctttgtt 16970301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 619
Target Start/End: Complemental strand, 25898570 - 25898462
Alignment:
Q  511 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 610  Q
    ||||||||||||||  | |||||||||| ||  |||| |||||||||| | |||| | ||| || | ||||||| |||||| ||||||||||||||||||    
T  25898570 ttataaggagtaaaattatcaaattttgctttaaaatttgagaaggtcgagtattttgggataatttttttttacaaataggtcacttattcagggacgg 25898471  T
Q  611 agggagtaa 619  Q
    |||||||||    
T  25898470 agggagtaa 25898462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 511 - 619
Target Start/End: Original strand, 31922032 - 31922140
Alignment:
Q  511 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 610  Q
    |||||||| |||||  |||||||||||| ||  |||| |||||||||||| |||| | |||||| | ||||||| |||||  ||||||||| ||||||||    
T  31922032 ttataaggggtaaaattgtcaaattttgctttaaaatttgagaaggtcaagtattttgggacaatttttttttacaaatatgtcacttatttagggacgg 31922131  T
Q  611 agggagtaa 619  Q
    || ||||||    
T  31922132 agagagtaa 31922140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 367 - 422
Target Start/End: Complemental strand, 30422643 - 30422588
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtcctt 422  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||    
T  30422643 ttaagaaaagtgtaacgatgaaagaaagagagtgatacttttactgagttgccctt 30422588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 497 - 582
Target Start/End: Complemental strand, 16964937 - 16964852
Alignment:
Q  497 accacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttt 582  Q
    |||||||||| ||||||||||| |||||  |||||||||||  ||| |||| |||||||||||| |||||| |||| ||| |||||    
T  16964937 accacaaaaagtatttataaggggtaaacttgtcaaattttacttaaaaatttgagaaggtcaagtattgtgggacgaattttttt 16964852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 367 - 475
Target Start/End: Original strand, 31921670 - 31921776
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||| | ||| |||| | |||||||| ||||   ||||||||||| |||| |||| |||    
T  31921670 ttaagaaaagtgtaaagatgaaagaaagagagtgatatttttactaaattgcccttattattatttttaaac--cttcacttttaaataataattacttt 31921767  T
Q  467 ctttgttcc 475  Q
      |||||||    
T  31921768 aattgttcc 31921776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 25898832 - 25898766
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattatttt 433  Q
    ||||||| || |||||||||||||||| ||||||||| ||||||||| ||| |||| | ||||||||    
T  25898832 ttaagaagagtgtaaagatgaaagaaaaaaagtgatatttttactgaattgcccttattattatttt 25898766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 586 - 618
Target Start/End: Complemental strand, 8381348 - 8381316
Alignment:
Q  586 aaatagatcacttattcagggacggagggagta 618  Q
    |||||||||||||||||||||||||||||||||    
T  8381348 aaatagatcacttattcagggacggagggagta 8381316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 586 - 618
Target Start/End: Complemental strand, 31921653 - 31921621
Alignment:
Q  586 aaatagatcacttattcagggacggagggagta 618  Q
    |||||||||||||||||||||||||||||||||    
T  31921653 aaatagatcacttattcagggacggagggagta 31921621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 378 - 438
Target Start/End: Original strand, 39646366 - 39646426
Alignment:
Q  378 gtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaac 438  Q
    ||||| |||||||||||| | ||||| ||||||||| ||| |||||| |||||||||||||    
T  39646366 gtaaaaatgaaagaaagagaatgatatttttactgaattgcccttgttattattttgaaac 39646426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 328 - 621
Target Start/End: Original strand, 38069895 - 38070198
Alignment:
Q  328 tattccatccgtccttgaataagtgacctatttgatcattt----------aagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttg 417  Q
    |||||| |||||||||||| ||||||||||||||| |||||          |||||||| |||||||||||||||||| |||||||||||||||||||||    
T  38069895 tattccctccgtccttgaacaagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagatagtgatacttttactgagttg 38069994  T
Q  418 tccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataag 517  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| |||||||||     
T  38069995 cccttgtcattattttgaaactttttcatttttaagtaatgattattttctttgttccactacaaactttaacatggggaccacaaaaagtatttataat 38070094  T
Q  518 gagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggagggagt 617  Q
    | |||||||||||||||||||  |||||||||||||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  38070095 gggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacagagggagt 38070194  T
Q  618 aaca 621  Q
    ||||    
T  38070195 aaca 38070198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 11254751 - 11254500
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11254751 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattatttt 11254652  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||| |||||||||||| |||||||| |||||    
T  11254651 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattg 11254552  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||| | ||||||| |||||| ||||||||||||||||||||||||||    
T  11254551 tgggacaatttttttttacaaataggtcacttattcagggacggagggagta 11254500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 27821024 - 27820773
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  27821024 ttaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 27820925  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||| ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  27820924 ctttgttccactacaaattttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattg 27820825  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  27820824 tgggacaaatattttttacaaataggtcacttattcagggacagagggagta 27820773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 335 - 618
Target Start/End: Complemental strand, 17493819 - 17493526
Alignment:
Q  335 tccgtccttgaataagtgacctatttgatcattt----------aagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgt 424  Q
    ||||||| ||||||||||||||||||||||||||          |||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  17493819 tccgtccctgaataagtgacctatttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactaagttgcccttgt 17493720  T
Q  425 cattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaa 524  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||||||  |||||||||||||||||| |||||||||| ||||||||||| |||||    
T  17493719 cattattttgaaactttttcatttttaagtaatgattactttatttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaa 17493620  T
Q  525 tctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  17493619 tctgtcaaattttgtttagaaatctgagaagatcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggaggaagta 17493526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 335 - 621
Target Start/End: Complemental strand, 18575321 - 18575025
Alignment:
Q  335 tccgtccttgaataagtgacctatttgatcattt----------aagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgt 424  Q
    ||||||| ||||||||||||||||||||||||||          |||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  18575321 tccgtccctgaataagtgacctatttgatcatttcacacaaattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgt 18575222  T
Q  425 cattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaa 524  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||   ||||    
T  18575221 cattattttgaaactttttcacttttaagtaatgattattttctttgttccactacaaactttaacatggggaccacaaaaagtatttataagagataaa 18575122  T
Q  525 tctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggagggagtaaca 621  Q
    | |||||||||||| ||||||||||||||||||| | |||||| |||||| | ||||||| |||||| |||||||||||||||||||||||||||||    
T  18575121 tttgtcaaattttgcttagaaatctgagaaggtcgagtattgtgggacaatttttttttacaaataggtcacttattcagggacggagggagtaaca 18575025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 39907159 - 39906911
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| |||    
T  39907159 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttatcattattttgaaattttttcacttttaagtaatgattacttt 39907060  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  39907059 ctttgttccactacaaactttaacatgg--accacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattg 39906962  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  39906961 tgggacaaata-tttttataaatagatcacttattcagggacggaggaagta 39906911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 367 - 615
Target Start/End: Original strand, 12738415 - 12738663
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| | ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  12738415 ttaagaaaagtgtaaagataaaagaaagataatgatatttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 12738514  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| | |||||||| ||||||||||| |||||| ||||||||| || |||||||||||| |||||||| ||||     
T  12738515 ctttgttccactacaaactttaacatggggatcacaaaaaatatttataaggggtaaatttgtcaaattctgcttagaaatctgataaggtcaagtatta 12738614  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggaggga 615  Q
    | |||||||||||||||  ||||||||||  |||| || ||||||||||    
T  12738615 tgggacaaatattttttccaaatagatcaagtattgagagacggaggga 12738663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 378 - 618
Target Start/End: Original strand, 17336030 - 17336270
Alignment:
Q  378 gtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccgt 477  Q
    |||||||||||||||||| | ||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||      
T  17336030 gtaaagatgaaagaaagagaatgatatttttactgaactgtccttgtcattattttgaaactttttcacttttaagtaatgattactttcgttgttccac 17336129  T
Q  478 tacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaata 577  Q
    || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| || |||||||||| |||||||||| |||| | |||||||||    
T  17336130 tagaaactttaacatgggaaccacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatctaagaaggtcaagtattatgggacaaata 17336229  T
Q  578 ttttttataaatagatcacttattcagggacggagggagta 618  Q
    ||||||  |||||| |||  |||| || |||||||||||||    
T  17336230 ttttttcaaaataggtcaagtattgagagacggagggagta 17336270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 367 - 621
Target Start/End: Complemental strand, 9754020 - 9753767
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtca-ttattttgaaactttttcacttttaagtaatgattattt 465  Q
    |||||||||| |||||||||||||||||| | ||||| ||||||||| |||||||||| | |||||||||||| ||  ||||||||||||||||||| ||    
T  9754020 ttaagaaaagtgtaaagatgaaagaaagataatgatatttttactgaattgtccttgttaattattttgaaacctt--cacttttaagtaatgattactt 9753923  T
Q  466 tctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatatt 565  Q
    |||||||| |  |||||||||| |||| |  |||||||||| ||||||||||  |||||| ||||||||| || |||||||| |||||||||||| ||||    
T  9753922 tctttgtttcactacaaacttttacattgagaccacaaaaaatatttataagaggtaaatttgtcaaattctgcttagaaatttgagaaggtcaagtatt 9753823  T
Q  566 gtaggacaaatattttttataaatagatcacttattcagggacggagggagtaaca 621  Q
     | ||||||||||||||| ||||||| |||  |||| |||||||||||||||||||    
T  9753822 atgggacaaatattttttttaaataggtcaagtattgagggacggagggagtaaca 9753767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 367 - 583
Target Start/End: Original strand, 13243596 - 13243811
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtca-ttattttgaaactttttcacttttaagtaatgattattt 465  Q
    |||||||||| |||||||| ||||||||| | ||||| ||||||||| |||||||||| | |||||||||||| ||  || |||||||||||||||||||    
T  13243596 ttaagaaaagtgtaaagataaaagaaagataatgatatttttactgaattgtccttgttaattattttgaaacctt--catttttaagtaatgattattt 13243693  T
Q  466 tctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatatt 565  Q
    ||||||||||  |||||||||| |||| |  |||||||||| ||||||||||| || ||| ||||||||| || |||||||| |||||||||||||||||    
T  13243694 tctttgttccactacaaacttttacattgagaccacaaaaagtatttataaggggtgaatttgtcaaattctgcttagaaatttgagaaggtcaaatatt 13243793  T
Q  566 gtaggacaaatatttttt 583  Q
    ||  |||| |||||||||    
T  13243794 gtgagacatatatttttt 13243811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 511 - 618
Target Start/End: Complemental strand, 11146877 - 11146770
Alignment:
Q  511 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 610  Q
    ||||||||||||||  |||||||||||||||  |||| ||| |||||||| |||| |   |||| | ||||||| |||||||||||||||||| ||||||    
T  11146877 ttataaggagtaaaattgtcaaattttgttttaaaatttgataaggtcaagtattttgaaacaatttttttttacaaatagatcacttattcaaggacgg 11146778  T
Q  611 agggagta 618  Q
    | ||||||    
T  11146777 aaggagta 11146770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 11147900 - 11147782
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||||||||||||| |||| | ||||| ||||||||| ||| |||| | |||||||| ||||   ||||||||||| |||| |||| |||    
T  11147900 ttaagaaaagtgtaaagatgaaaggaagagaatgatatttttactgaattgcccttattattatttttaaac--cttcacttttaaataataattacttt 11147803  T
Q  467 ctttgttccgttacaaacttt 487  Q
      |||||||  ||||||||||    
T  11147802 aattgttccactacaaacttt 11147782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 619
Target Start/End: Original strand, 11254768 - 11254801
Alignment:
Q  586 aaatagatcacttattcagggacggagggagtaa 619  Q
    |||||| |||||||||||||||||||||||||||    
T  11254768 aaataggtcacttattcagggacggagggagtaa 11254801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 367 - 619
Target Start/End: Complemental strand, 4041198 - 4040946
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4041198 ttaagaaaagtgtaaagatgaaagaaagggagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattacttt 4041099  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| ||||||| || ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  4041098 ctttgttccactacaaactttaacatggggaccacaacaagtatttataaggggtaaatccgtcaaattttgcttagaaatctgagaaggtcaagtattg 4040999  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    | |||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  4040998 tgggacaaatattttttacaaataggtcacttattcagagacggagggagtaa 4040946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 29737656 - 29737405
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  29737656 ttaagaaaagtgtaaaaataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 29737557  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||| |||||    
T  29737556 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctaagaaggtcaagtattg 29737457  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  29737456 tgggacaaatattttttacaaataggtcacttattcagggacggagggagta 29737405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 40232164 - 40232415
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  40232164 ttaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 40232263  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||||    
T  40232264 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattg 40232363  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  40232364 tgggacaaatattttttacaaataggtcacttattcaaggacggagggagta 40232415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 6392522 - 6392271
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  6392522 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactaagttgcccttgtcattattttgaaactttttcacttttaagtaatgattaattt 6392423  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| || |||||    
T  6392422 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtaaagtattg 6392323  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||||||||||||| ||| ||||||| ||||    
T  6392322 tgggacaaatattttttacaaatagatcacttattaaggaacggaggaagta 6392271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 27596135 - 27596385
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27596135 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgggttgcccttgtcattattttgaaactttttcacttttaagtaatgattatttt 27596234  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    ||||||| |  |||||||||||||||||| |||||||||| ||||||||| | |||||||||||||||||||  |||||||||||||||||||| |||||    
T  27596235 ctttgtttcactacaaactttaacatggg-accacaaaaagtatttataaagggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattg 27596333  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  27596334 tgggacaaatattttttacaaataggtcacttattcagggacggagggagta 27596385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 335 - 616
Target Start/End: Original strand, 25943656 - 25943943
Alignment:
Q  335 tccgtccttgaataagtgacctatttgatcattt--------aagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtca 426  Q
    ||||||| ||||||||||||||||||||||||||        |||||||  |||||||||||||||||| ||||||||||||||||| ||| | ||||||    
T  25943656 tccgtccctgaataagtgacctatttgatcatttcacagattaagaaaattgtaaagatgaaagaaagagagtgatacttttactgaattgccattgtca 25943755  T
Q  427 ttattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatc 526  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||| ||  || ||| ||||||||||| |||||||    
T  25943756 ttattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggac--cataaagtatttataaggggtaaatc 25943853  T
Q  527 tgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggagggag 616  Q
    |||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  25943854 tgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggag 25943943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 41427697 - 41427948
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||| ||||| |||||||||||||||||| ||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  41427697 ttaaaaaaagtgtaaagatgaaagaaagagagtaatacttttattgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 41427796  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    ||||||| |  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  41427797 ctttgtttcactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaaatattg 41427896  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||| | ||||||||||||||    
T  41427897 tgggacaaatattttttacaaataggtcacttatttaaggacggagggagta 41427948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 31689402 - 31689653
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||    
T  31689402 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaaaaaatgattacttt 31689501  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    ||||||| |  || ||||||||||||| | |||||||||| ||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  31689502 ctttgtttcactataaactttaacatgaggaccacaaaaagtatatataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattg 31689601  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | ||||| |||||||||| |||||| ||||||||||||||||| ||||||||    
T  31689602 tgggacagatattttttacaaataggtcacttattcagggacgaagggagta 31689653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 367 - 619
Target Start/End: Original strand, 38276594 - 38276846
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    ||||||||||||||||||||||||||||| | ||||  ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  38276594 ttaagaaaagagtaaagatgaaagaaagagaatgatgtttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 38276693  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||| ||| | |||||||||| ||||||||||| |||||||||||||||| || |||||||| ||| |||||||| |||||    
T  38276694 ctttgttccactacaaactttaatatgaggaccacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatatgaaaaggtcaagtattg 38276793  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    | |||||||||||||||  |||||| |||  |||| |||||||||||||||||    
T  38276794 tgggacaaatatttttttcaaataggtcaagtattgagggacggagggagtaa 38276846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 367 - 619
Target Start/End: Original strand, 24300203 - 24300445
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| || ||||||||||||||| ||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||| |||    
T  24300203 ttaagaaaagtgtgaagatgaaagaaagagagtgatacttttactgagttgcccttgt----------aaactttttcacttttaagtaatgattacttt 24300292  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    ||||||| |  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||| |||||||| |||||    
T  24300293 ctttgtttcactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttgataaggtcaagtattg 24300392  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    | |||||||||||||||| |||||| |||||||||||  ||||||||||||||    
T  24300393 tgggacaaatattttttacaaataggtcacttattcaaagacggagggagtaa 24300445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 21442849 - 21443098
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||| ||| | | ||||| ||||||| | ||| |||||| ||||||||||||||||  ||||||||||||||| ||| |||    
T  21442849 ttaagaaaagtgtaaagatgaaaaaaatagaatgatatttttactaaattgcccttgttattattttgaaacttt--cacttttaagtaatggttacttt 21442946  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||| ||||  | |||||||| ||||||  |||||||||| |||||||||||  ||||| ||||||||| |  ||| ||||||||||||||||| |||||    
T  21442947 ctttattccactgcaaacttttacatggagaccacaaaaagtatttataagggataaatttgtcaaattctacttaaaaatctgagaaggtcaagtattg 21443046  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||  |||||| |||  |||| ||||||||||||||||    
T  21443047 tgggacaaatatttttttcaaataggtcaagtattgagggacggagggagta 21443098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 380 - 583
Target Start/End: Complemental strand, 48838296 - 48838095
Alignment:
Q  380 aaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccgtta 479  Q
    |||||| ||||||||||| ||||| ||||||| | |||||||||| |||||||| |||||||  ||||||||||||||||||| ||||||||||||  ||    
T  48838296 aaagataaaagaaagaaaatgatatttttactaaattgtccttgttattattttaaaacttt--cacttttaagtaatgattactttctttgttccacta 48838199  T
Q  480 caaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatatt 579  Q
    || ||||| ||||||  |||||||||| ||||||||||| |||||| ||||||||| || ||| ||||||||||| ||||| |||||| |||||||||||    
T  48838198 cacacttttacatggagaccacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaaagtcaagtattgtgggacaaatatt 48838099  T
Q  580 tttt 583  Q
    ||||    
T  48838098 tttt 48838095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 511 - 618
Target Start/End: Complemental strand, 22337818 - 22337710
Alignment:
Q  511 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatatttttt-ataaatagatcacttattcagggacg 609  Q
    |||||||| |||||  |||||| ||||| ||  |||| |||||||||||| |||| | |||||| | |||||| | |||||| |||||||||||||||||    
T  22337818 ttataaggggtaaaattgtcaatttttgctttaaaatttgagaaggtcaagtattttgggacaattttttttttacaaataggtcacttattcagggacg 22337719  T
Q  610 gagggagta 618  Q
    |||||||||    
T  22337718 gagggagta 22337710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 367 - 462
Target Start/End: Complemental strand, 22338219 - 22338126
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgatta 462  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||||| ||| |||| | |||||||| ||||   ||||||||||| |||| ||||    
T  22338219 ttaagaaaagtgtaaagatgaaagaaagagagtgatatttttactgaattgcccttattattatttttaaac--cttcacttttaaataataatta 22338126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 22620001 - 22619883
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||| ||||| ||| ||| | || | |||||||| ||||   ||||||||||| |||| |||| |||    
T  22620001 ttaagaaaagtgtaaagatgaaagaaagagagtgatatttttattgaattgcctttattattatttttaaac--cttcacttttaaataataattacttt 22619904  T
Q  467 ctttgttccgttacaaacttt 487  Q
      |||||||  ||||||||||    
T  22619903 aattgttccactacaaacttt 22619883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 618
Target Start/End: Complemental strand, 22619631 - 22619524
Alignment:
Q  511 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 610  Q
    ||||||||||| ||  |||||||||||| ||  |||| ||||||| |||| |||| |   |||| | | ||||| |||||| ||||||||||||| ||||    
T  22619631 ttataaggagtcaaattgtcaaattttgctttaaaatttgagaagatcaagtattttgaaacaattttattttacaaataggtcacttattcaggaacgg 22619532  T
Q  611 agggagta 618  Q
    ||||||||    
T  22619531 agggagta 22619524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 367 - 619
Target Start/End: Complemental strand, 36982437 - 36982185
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36982437 ttaagaaaagtgtaaagatgaaagaaaaagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattatttt 36982338  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
     ||||||||  |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||  ||||||| |||||||||||| |||||    
T  36982337 atttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcctagaaatatgagaaggtcaagtattg 36982238  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    | |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  36982237 tgggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 36982185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 335 - 619
Target Start/End: Complemental strand, 14044348 - 14044055
Alignment:
Q  335 tccgtccttgaataagtgacctatttgatcattt----------aagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgt 424  Q
    ||||||| ||||||||||||||||||||||||||          |||||||| |||||||||||||||||| ||||||||||| ||| ||||| ||||||    
T  14044348 tccgtccctgaataagtgacctatttgatcatttcacacgtattaagaaaagtgtaaagatgaaagaaagagagtgatacttt-actaagttgcccttgt 14044250  T
Q  425 cattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaa 524  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||  |||||||||||||||||| |||||||||| ||||||||||  |||||    
T  14044249 cattattttgaaactttttcacttttaaataatgattactttatttgttccactacaaactttaacatggggaccacaaaaagtatttataagaggtaaa 14044150  T
Q  525 tctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    |||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  14044149 tctgtcaaattttgcttagaaatctgagaaggtcaaatattatgggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 14044055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 367 - 584
Target Start/End: Original strand, 42897423 - 42897640
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  42897423 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 42897522  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  42897523 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattg 42897622  T
Q  567 taggacaaatatttttta 584  Q
    | ||||||||||||||||    
T  42897623 tgggacaaatatttttta 42897640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 2970715 - 2970964
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtca-ttattttgaaactttttcacttttaagtaatgattattt 465  Q
    |||||||||  |||||||||||||||||| | ||||| ||| ||||| ||| |||||| | |||||||||||| ||  ||||||||||||||||||| ||    
T  2970715 ttaagaaaaatgtaaagatgaaagaaagataatgatattttcactgaattgcccttgttaattattttgaaacctt--cacttttaagtaatgattactt 2970812  T
Q  466 tctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatatt 565  Q
    ||||||||||  ||||||||||| ||| |  |||||||||| |||||||| || |||||| ||||||||| || |||||||| |||||| ||||| ||||    
T  2970813 tctttgttccactacaaacttta-cattgagaccacaaaaagtatttatacggggtaaatttgtcaaattctgcttagaaatttgagaatgtcaagtatt 2970911  T
Q  566 gtaggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    || |||||||||||||||  |||||| |||  |||| ||||||||||||||||    
T  2970912 gtgggacaaatatttttttcaaataggtcaagtattgagggacggagggagta 2970964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 619
Target Start/End: Complemental strand, 33403301 - 33403193
Alignment:
Q  511 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 610  Q
    |||||||| |||||  |||||||||||| ||  |||| |||||||||||| |||| |||||||| | ||||||| |||||||||||||||||||||||||    
T  33403301 ttataaggggtaaaattgtcaaattttgctttaaaatttgagaaggtcaagtattttaggacaatttttttttacaaatagatcacttattcagggacgg 33403202  T
Q  611 agggagtaa 619  Q
    |||||||||    
T  33403201 agggagtaa 33403193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 378 - 475
Target Start/End: Original strand, 36767936 - 36768031
Alignment:
Q  378 gtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttcc 475  Q
    |||||||||||||||||| ||||||| ||||||||| ||| |||| | |||||||| ||||   ||||||||||| ||||||||| ||||||||||||    
T  36767936 gtaaagatgaaagaaagagagtgatatttttactgaattgcccttattattatttttaaac--cttcacttttaaataatgattactttctttgttcc 36768031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 367 - 484
Target Start/End: Complemental strand, 33404480 - 33404365
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||  |||||||||||||||||| ||||||| ||||||||| ||| |||| | |||||||| |||| |||  |||||||| |||| |||| |||    
T  33404480 ttaagaaaaatgtaaagatgaaagaaagagagtgatatttttactgaattgcccttattattatttttaaaccttt--acttttaaataataattacttt 33404383  T
Q  467 ctttgttccgttacaaac 484  Q
      |||||||  |||||||    
T  33404382 aattgttccactacaaac 33404365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 5712667 - 5712600
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttg 434  Q
    |||||||||  |||||||||||||||||||||||||| |||| |||| ||| |||| | |||||||||    
T  5712667 ttaagaaaaatgtaaagatgaaagaaagaaagtgatattttttctgaattgcccttattattattttg 5712600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 511 - 618
Target Start/End: Original strand, 36768782 - 36768889
Alignment:
Q  511 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 610  Q
    |||||||| |||||  |||||||||||| ||  |||| ||| |||||| | |||| | |||||| | ||||  | |||||| ||||||||||||||||||    
T  36768782 ttataaggggtaaaattgtcaaattttgctttaaaatttgataaggtcgagtattttgggacaatttttttaaaaaaataggtcacttattcagggacgg 36768881  T
Q  611 agggagta 618  Q
    ||||||||    
T  36768882 agggagta 36768889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 184; Significance: 4e-99; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 10642 - 10893
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10642 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattatttt 10741  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||| |||||||||||| |||||||| |||||    
T  10742 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattg 10841  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||| | ||||||| |||||| ||||||||||||||||||||||||||    
T  10842 tgggacaatttttttttacaaataggtcacttattcagggacggagggagta 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 619
Target Start/End: Complemental strand, 10625 - 10592
Alignment:
Q  586 aaatagatcacttattcagggacggagggagtaa 619  Q
    |||||| |||||||||||||||||||||||||||    
T  10625 aaataggtcacttattcagggacggagggagtaa 10592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 184; Significance: 4e-99; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 32046084 - 32045833
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||    
T  32046084 ttaagaaaagtgtaaaaatgaaagaaagaaagtgatacttttaccgagttgcccttgtcgttattttgaaactttttcacttttaagtaatgattacttt 32045985  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||    
T  32045984 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctttcaaattttgcttagaaatctgagaaggtcaagtattg 32045885  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | | |||||||||||||| |||||||||||||||||||||||||||||||||    
T  32045884 tggaacaaatattttttacaaatagatcacttattcagggacggagggagta 32045833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 367 - 619
Target Start/End: Complemental strand, 46862807 - 46862555
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  46862807 ttaagaaaagtgtaaagataaaagaaagagagtgatacttttcctgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 46862708  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||| |||||    
T  46862707 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttaaaaatctaagaaggtcaagtattg 46862608  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    | |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  46862607 tgggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 46862555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 38321896 - 38321645
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  38321896 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 38321797  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |||||||||| |||||||||||  ||||||| | |||||||| ||||||||||||||||||||| |||||    
T  38321796 ctttgttccactacaaactttaacatggggaccacaaaaagtatttataagggttaaatcttttaaattttgcttagaaatctgagaaggtcaagtattg 38321697  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  38321696 tgggacaaatattttttacaaataggtcagttattcagggacggagggagta 38321645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 1929266 - 1929516
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1929266 ttaagaaaagtgtaaagatgaaagaaaaagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattttttt 1929365  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
     ||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||||    
T  1929366 -tttgttccactacaaactttaacatggggaccacaaaaaatatttataaggggtaaatctgtcaaattttgcttagaaatatgagaaggtcaagtattg 1929464  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  1929465 tgggacaaatattttttacaaataggtcacttatttagggacggagggagta 1929516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 39150946 - 39151197
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||  |||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  39150946 ttaagaaaaatgtaaagataaaagaaagagaatgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 39151045  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||| |||||    
T  39151046 ctttgttccactacaaactttaacatgaggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctaagaaggtcaagtattg 39151145  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  39151146 tgggacaaatattttttacaaataggtcacttattcagggacggagagagta 39151197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 28036749 - 28037001
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatactttt-actgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattt 465  Q
    |||||||||| |||||||| ||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  28036749 ttaagaaaagtgtaaagataaaagaaagagagtgatattttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactt 28036848  T
Q  466 tctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatatt 565  Q
    ||||||||||  |||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||    
T  28036849 tctttgttccactacaaactttaacatggggaccacaaaaagtatttataagggataaatctgtcaaattttgcttagaaatctgagaaggtcaagtatt 28036948  T
Q  566 gtaggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    || |||||||||||||||| |||||| ||| ||||| ||||||||||||||||    
T  28036949 gtgggacaaatattttttacaaataggtcatttattaagggacggagggagta 28037001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 367 - 619
Target Start/End: Complemental strand, 46371172 - 46370926
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||     |||||||||||| |||    
T  46371172 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgaattgcccttgtcattattttgaaactttttca-----aagtaatgattacttt 46371078  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||| |||||| ||||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||||| |||||    
T  46371077 ctttgttccactacaaactttaatatggga-ccacaaaaagtatttataaggggtaaatttgtcaaattttgcttagaaatctgagaaggtcaagtattg 46370979  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    | |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  46370978 tgggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 46370926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 50777248 - 50776997
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  50777248 ttaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 50777149  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||||||||| |||||||| | |||||||||| ||||     
T  50777148 ctttgttccactacaaactttaacatggggaccccaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttaagaaggtcaagtatta 50777049  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||  ||||||||| || |||| || |||||    
T  50777048 tgggacaaatattttttacaaataagtcacttatttagagacgaagagagta 50776997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 8229315 - 8229063
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaa-agtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattt 465  Q
    |||||||||| |||||||||||| ||| || ||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||    
T  8229315 ttaagaaaagtgtaaagatgaaaaaaaaaagagtgatatttttactgagttgcccttgtcattattttaaaactttttcacttttaagtaatgattactt 8229216  T
Q  466 tctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatatt 565  Q
    ||||| || |  |||||||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||| ||| |||||| ||||||| || ||||    
T  8229215 tctttatttcactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatttgtcaaattttgcttaaaaatctaagaaggttaagtatt 8229116  T
Q  566 gtaggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    |  | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8229115 gaggaacaaatattttttataaataggtcacttattcagggacggagggagta 8229063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 367 - 619
Target Start/End: Original strand, 1207501 - 1207751
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||| |||||||||||||| | ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  1207501 ttaagaaaagtgtagagatgaaagaaagataatgatatttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 1207600  T
Q  467 ctttgttccgttacaaactttaacat-gggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatatt 565  Q
    | |||||||  ||||||||||||||| ||| ||  | |||| ||||||||||| |||||||||||||||| || ||||||||||||||||||||| ||||    
T  1207601 ccttgttcctctacaaactttaacataggggac--ccaaaagtatttataagg-gtaaatctgtcaaattctgcttagaaatctgagaaggtcaagtatt 1207697  T
Q  566 gtaggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
     || ||||||||||||||  |||||| |||  |||| | |||||||||||||||    
T  1207698 ataagacaaatatttttttcaaataggtcaaatattgaaggacggagggagtaa 1207751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 367 - 619
Target Start/End: Original strand, 40562485 - 40562735
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| | ||||| ||||||||| ||| |||||| |||||||||||||||||  |||||||||||||||||| |||    
T  40562485 ttaagaaaagtgtaaagatgaaagaaagagaatgatatttttactgaattgcccttgttattattttgaaactttt--acttttaagtaatgattacttt 40562582  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    ||||||||   |||||||||| ||||||  |||||||| | ||||||||||| |||||| | ||||||| || ||| |||| |||||| ||||| |||||    
T  40562583 ctttgttctactacaaacttttacatggagaccacaaagagtatttataaggggtaaatttatcaaattctgcttaaaaatatgagaatgtcaagtattg 40562682  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    | |||||||||||||||  |||||| |||  |||| ||| |||||||||||||    
T  40562683 tgggacaaatatttttttcaaataggtcaagtattgaggtacggagggagtaa 40562735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 405 - 615
Target Start/End: Complemental strand, 38817984 - 38817777
Alignment:
Q  405 ttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaa 504  Q
    ||||| ||| |||||||||| ||||||||||||| ||  || ||||||||||| |||| |||||||||| |  |||||||||| ||||||| ||||||||    
T  38817984 ttttattgaattgtccttgttattattttgaaacctt--ca-ttttaagtaattattactttctttgtttcactacaaacttttacatggggaccacaaa 38817888  T
Q  505 aattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcag 604  Q
    || ||||||||||| |||||| | |||||||||| |||||||| |||||| |||||||||| | |||||||||||||||  ||||||||||  |||| ||    
T  38817887 aagtatttataaggggtaaatttatcaaattttgcttagaaatttgagaaagtcaaatattatgggacaaatatttttttcaaatagatcaagtattgag 38817788  T
Q  605 ggacggaggga 615  Q
    |||| ||||||    
T  38817787 ggacagaggga 38817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 367 - 595
Target Start/End: Original strand, 9129450 - 9129679
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatact---tttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattat 463  Q
    |||| ||||| |||||||| ||||||||| | ||||| |   |||||| | |||||||||| |||||||| |||||||  |||||||||||||||||||     
T  9129450 ttaacaaaagtgtaaagataaaagaaagagaatgataatatttttactcaattgtccttgttattatttttaaacttt--cacttttaagtaatgattac 9129547  T
Q  464 tttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaata 563  Q
    ||||||||||||  |||||| ||| ||||||  |||||||||| ||||||||||| |||||| | ||||||| || ||| |||||||||||||| |||||    
T  9129548 tttctttgttccactacaaaattttacatggagaccacaaaaaatatttataaggggtaaatttatcaaattctgcttaaaaatctgagaaggtaaaata 9129647  T
Q  564 ttgtaggacaaatattttttataaatagatca 595  Q
    || |  || |||||||||||  ||||||||||    
T  9129648 ttatgagataaatatttttttcaaatagatca 9129679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 176; Significance: 2e-94; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 28541636 - 28541887
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28541636 ttaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgggttgcccttgtcattattttgaaactttttcacttttaagtaatgattatttt 28541735  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
     ||||||||  |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||    
T  28541736 ttttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattg 28541835  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | ||| |||||||||||| |||||  |||||||||||| |||||||||||||    
T  28541836 tgggataaatattttttacaaataagtcacttattcagagacggagggagta 28541887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 29182842 - 29182591
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||  |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29182842 ttaagaaaaatgtaaagatgaaagaaagagagtgatatttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattatttt 29182743  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  ||||||||||||||| || |||||||||  ||||||||||  |||||||||||||||||||  |||||||||||||||||||| |||||    
T  29182742 ctttgttccactacaaactttaacatagggaccacaaaatgtatttataagaggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattg 29182643  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    |||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  29182642 taggacaaatattttttacaaataggtcacttattcagggacagagggagta 29182591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 1241359 - 1241109
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||    
T  1241359 ttaagaaaaatgtaaaaatgaaagaaagaaagtgatacttttactgagttgcccttgtcattattttgaaactttttca-ttttaagtaatgattacttt 1241261  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  | |||||||||| ||||| |||||||||| ||||||||||  ||||||||||||||||||| |||||||||||||||| |||| |||||    
T  1241260 ctttgttccactgcaaactttaatatggggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaagttcaagtattg 1241161  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1241160 tgggacaaatattttttacaaatagatcacttattcagggacggagggagta 1241109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 367 - 619
Target Start/End: Complemental strand, 12350523 - 12350271
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  12350523 ttaagaaaagtgtaaagatgaaagaaagagagtgatgcttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 12350424  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||    |||||||||||||||| | |||||||||| ||| ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  12350423 ctttgttttactacaaactttaacatgaggaccacaaaaagtatatataaggggtaaatctgtcaaattttgcttagaaatttgagaaggtcaaatattg 12350324  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    | ||||||||| |||||| |||||| |||||||||||| |||||||| |||||    
T  12350323 tgggacaaatactttttacaaataggtcacttattcagagacggaggaagtaa 12350271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 30736670 - 30736419
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30736670 ttaagaaaagtgtaaagatgaaagaaagagaatgatatttttactgaattgtccttgtcattattttgaaactttttcacttttaagtaatgattacttt 30736571  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||||| |  ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  30736570 ctttgttcctctacaaactttaacatggggattacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaaatattg 30736471  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||  |||||| |||  |||| ||||||||||| ||||    
T  30736470 tgggacaaatatttttttcaaataggtcaagtattgagggacggaggaagta 30736419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 372 - 618
Target Start/End: Complemental strand, 13042217 - 13041972
Alignment:
Q  372 aaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttctttg 471  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||  ||| |||| ||||||||||||||||||||||||||||    
T  13042217 aaaagtgtaaagatgaaagaaagagagtgatatttttactgagttgcccttgtcattatttaaaaaatttt-cacttttaagtaatgattattttctttg 13042119  T
Q  472 ttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtagga 571  Q
    ||||  ||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||| |||    
T  13042118 ttccactacaaactttaacatagggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttaaaaatctgagaaggtcaagtattgtggga 13042019  T
Q  572 caaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  13042018 caaatattttttacaaataggtcacttattcaaggacggagggagta 13041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 16436026 - 16435779
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  16436026 ttaagaaaagtgtaaagatgaaagaaag----tgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 16435931  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||||||| |||||||||||| |||||||| || ||||||||||||||||||  |||||||| |||||||||||| |||||    
T  16435930 ctttgttccactacaaactttaacatgagaaccacaaaaagtatttatatggggtaaatctgtcaaattttccttagaaatttgagaaggtcaagtattg 16435831  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||  ||| ||||| ||||||||||| ||||    
T  16435830 tgggacaaatattttttacaaataagtcatttatttagggacggaggaagta 16435779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 367 - 622
Target Start/End: Original strand, 7271127 - 7271383
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||| | | ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  7271127 ttaagaaaagtgtaaagatgaaagaaatagaatgatatttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 7271226  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||| ||||  |||||||||||||||||| || ||||||| ||||||||||| |||||||||||||||| || |||||||||| |||||||||| ||||     
T  7271227 ctttattccactacaaactttaacatggggacaacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatctaagaaggtcaagtatta 7271326  T
Q  567 taggacaaatattttttat-aaatagatcacttattcagggacggagggagtaacac 622  Q
    | ||||||||||||||| | |||||| |||  |||| ||||| |||| |||||||||    
T  7271327 tgggacaaatattttttttcaaataggtcaagtattgagggatggagtgagtaacac 7271383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 367 - 583
Target Start/End: Original strand, 31013544 - 31013760
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| ||||| | |||||||||| | ||||| ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  31013544 ttaagaaaagtgtaaaaacgaaagaaagataatgatatttttactgaattgcccttatcattattttgaaactttttcacttttaagtaatgattatttt 31013643  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    ||||||||   |||||||||||| |||||  ||||||||| |||||||||||  |||||| |||||||| || |||||||||||||||| |||| |||||    
T  31013644 ctttgttctactacaaactttaatatgggggccacaaaaaatatttataagggataaatccgtcaaattctgcttagaaatctgagaagatcaagtattg 31013743  T
Q  567 taggacaaatatttttt 583  Q
    | | |||||||||||||    
T  31013744 tggaacaaatatttttt 31013760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 370 - 583
Target Start/End: Complemental strand, 1870780 - 1870569
Alignment:
Q  370 agaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttctt 469  Q
    |||||||  ||||||||||||||||  | ||||| ||||||| | ||| |||||| ||||||||||| | ||  ||||||||||||||||||| ||||||    
T  1870780 agaaaagtataaagatgaaagaaagggaatgatatttttactaaattgcccttgttattattttgaagcctt--cacttttaagtaatgattactttctt 1870683  T
Q  470 tgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtag 569  Q
    ||||||  |||||||||| ||||||  | |||||||| ||||||||||| |||||| ||||||||| || ||| ||||||||||||||||| |||||| |    
T  1870682 tgttccactacaaacttttacatggagatcacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaaggtcaagtattgttg 1870583  T
Q  570 gacaaatatttttt 583  Q
     |||||||||||||    
T  1870582 aacaaatatttttt 1870569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 367 - 566
Target Start/End: Complemental strand, 13210592 - 13210396
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| | ||||  ||||||||| | | |||||| || |||||||||||||  |||||||||||||  |||| |||    
T  13210592 ttaagaaaagtgtaaagatgaaagaaagagaatgattattttactgaatcgcccttgttat-attttgaaacttt--cacttttaagtaagaattacttt 13210496  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||| ||||||  |||||||||| ||||||||| | |||||| ||||||||| || ||| |||| |||||||||||| |||||    
T  13210495 ctttgttccactacaaacttttacatggagaccacaaaaaatatttataatgggtaaatttgtcaaattctgcttaaaaatttgagaaggtcaagtattg 13210396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 500 - 609
Target Start/End: Original strand, 31833747 - 31833856
Alignment:
Q  500 acaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcactta 599  Q
    ||||||| ||||| |||||  ||||| ||||||||| || ||| ||||||||||||||||| ||| || |||||||||||||||  ||||||||||  ||    
T  31833747 acaaaaagtatttttaagggataaatttgtcaaattatgcttaaaaatctgagaaggtcaagtatcgtgggacaaatatttttttcaaatagatcaagta 31833846  T
Q  600 ttcagggacg 609  Q
    || |||||||    
T  31833847 ttgagggacg 31833856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 367 - 475
Target Start/End: Original strand, 31833640 - 31833743
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||| | | ||||| ||||||| | ||| ||||   ||||||||||||| ||  || ||||||||||||||||||||    
T  31833640 ttaagaaaagtgtaaagatgaaagaaaaataatgatatttttactaaattgccctt---attattttgaaacctt--catttttaagtaatgattatttt 31833734  T
Q  467 ctttgttcc 475  Q
    |||||||||    
T  31833735 ctttgttcc 31833743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 621
Target Start/End: Original strand, 16436043 - 16436078
Alignment:
Q  586 aaatagatcacttattcagggacggagggagtaaca 621  Q
    |||||| |||||||||||||||||||||||||||||    
T  16436043 aaataggtcacttattcagggacggagggagtaaca 16436078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 172; Significance: 5e-92; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 367 - 618
Target Start/End: Original strand, 10066 - 10317
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||| ||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||    
T  10066 ttaagaaaagtgtaaagataaaagaaagagagtgatatttttactgagttgcccttgttattattttgaaactttttcacttttaagtaatgattacttt 10165  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  || ||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||| |||||||| |||||||||||| |||||    
T  10166 ctttgttccactataaactttaacatggggaccacaaaaagtatttataagggataaatctgtcaaattttgcttagaaatatgagaaggtcaagtattg 10265  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  10266 tgggacaaatattttttacaaatagatcacttattcaggaacggagggagta 10317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 172; Significance: 5e-92; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 367 - 618
Target Start/End: Complemental strand, 70004 - 69753
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  70004 ttaagaaaagtgtaaagatgaaagaaagagagtgataattttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattacttt 69905  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    |||||||||  |||||||||||| | ||| | |||||||| ||||||||||  ||||||||||||||||||| |||||||| |||||||||||| |||||    
T  69904 ctttgttccactacaaactttaatacggggatcacaaaaagtatttataagcggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattg 69805  T
Q  567 taggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    | |||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  69804 tgggacaaatattttttacaaatatgtcacttattcagggacggagggagta 69753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 142; Significance: 4e-74; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 421 - 618
Target Start/End: Complemental strand, 16554 - 16357
Alignment:
Q  421 ttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggag 520  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||||||||| |||||||||| ||||||||| | |    
T  16554 ttgtcattattttgaaactttttcacttttaagtaatgattactttctttgtttcactacaaactttaacatggggaccacaaaaagtatttataaaggg 16455  T
Q  521 taaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggagggagta 618  Q
    |||||||||||||||||| |||||||| |||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  16454 taaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 16357  T

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Target: scaffold0532 (Bit Score: 140; Significance: 7e-73; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 367 - 598
Target Start/End: Complemental strand, 4065 - 3834
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||| ||| | || | |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||| |||    
T  4065 ttaagaaaagggtaaagatgaaaaaaaaagagcgctacttttactgagttacccttgtcattattttaaaactttttcacttttaagtaatgattacttt 3966  T
Q  467 ctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 566  Q
    ||||||||| ||||||||||||||||| | ||| |||||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||||     
T  3965 ctttgttccattacaaactttaacatgaggaccgcaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtatta 3866  T
Q  567 taggacaaatattttttataaatagatcactt 598  Q
    | |||||||||||||||| |||||| ||||||    
T  3865 tgggacaaatattttttacaaataggtcactt 3834  T

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Target: scaffold0016 (Bit Score: 101; Significance: 1e-49; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 367 - 495
Target Start/End: Original strand, 92218 - 92346
Alignment:
Q  367 ttaagaaaagagtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattatttt 466  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  92218 ttaagaaaagtgtaaagatgaaagaaagagagtgacacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttt 92317  T
Q  467 ctttgttccgttacaaactttaacatggg 495  Q
    |||||||||  ||||||||||||||||||    
T  92318 ctttgttccactacaaactttaacatggg 92346  T

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Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 572 - 619
Target Start/End: Original strand, 92374 - 92421
Alignment:
Q  572 caaatattttttataaatagatcacttattcagggacggagggagtaa 619  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  92374 caaatattttttacaaatagatcacttattcagagacggagggagtaa 92421  T

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Target: scaffold1194 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold1194
Description:

Target: scaffold1194; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 378 - 583
Target Start/End: Complemental strand, 1208 - 1014
Alignment:
Q  378 gtaaagatgaaagaaagaaagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccgt 477  Q
    |||||||||||||||||| | ||||| ||||||||| |||  ||||| ||||||||||||| ||  ||||||||||||||||||         |||||      
T  1208 gtaaagatgaaagaaagagaatgatatttttactgaattgctcttgttattattttgaaacctt--cacttttaagtaatgatt---------gttccac 1120  T
Q  478 tacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaata 577  Q
    |||||||||| ||||||  |||||||||| ||||||||||| |||||| ||||||||  || ||| |||||||||||| |||| |||||| |||||||||    
T  1119 tacaaacttttacatggagaccacaaaaagtatttataaggggtaaatttgtcaaatcctgcttaaaaatctgagaagctcaagtattgtgggacaaata 1020  T

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