View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18213_low_12 (Length: 301)

Name: NF18213_low_12
Description: NF18213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18213_low_12
NF18213_low_12
[»] chr8 (74 HSPs)
chr8 (19-252)||(7295139-7295373)
chr8 (32-194)||(13186329-13186491)
chr8 (35-194)||(36928746-36928905)
chr8 (38-194)||(40317966-40318122)
chr8 (37-168)||(7294103-7294233)
chr8 (30-192)||(34685530-34685691)
chr8 (33-194)||(1425050-1425211)
chr8 (39-172)||(38862855-38862988)
chr8 (32-192)||(4994653-4994813)
chr8 (34-194)||(12198948-12199108)
chr8 (34-194)||(12443376-12443536)
chr8 (34-186)||(23663543-23663695)
chr8 (36-194)||(38955942-38956100)
chr8 (38-177)||(34177257-34177396)
chr8 (38-172)||(12272920-12273054)
chr8 (35-177)||(34061615-34061757)
chr8 (34-177)||(34176443-34176582)
chr8 (31-172)||(39071934-39072074)
chr8 (36-194)||(20385568-20385726)
chr8 (35-172)||(8316652-8316789)
chr8 (31-194)||(31608783-31608946)
chr8 (34-144)||(23663834-23663944)
chr8 (36-194)||(39071676-39071834)
chr8 (35-144)||(20386750-20386859)
chr8 (31-112)||(33357493-33357574)
chr8 (35-194)||(13186059-13186218)
chr8 (35-194)||(40318234-40318393)
chr8 (36-194)||(16388796-16388954)
chr8 (37-194)||(30711987-30712143)
chr8 (37-194)||(30719764-30719920)
chr8 (32-144)||(23698564-23698676)
chr8 (46-193)||(22915399-22915546)
chr8 (33-148)||(34060486-34060601)
chr8 (54-192)||(35756854-35756993)
chr8 (36-177)||(2534695-2534836)
chr8 (35-144)||(8316908-8317017)
chr8 (36-172)||(23698308-23698445)
chr8 (27-82)||(16388574-16388629)
chr8 (36-194)||(4405930-4406088)
chr8 (36-192)||(36928479-36928632)
chr8 (36-148)||(38955703-38955815)
chr8 (35-142)||(22915680-22915787)
chr8 (31-177)||(25124848-25124994)
chr8 (35-109)||(31608526-31608599)
chr8 (36-177)||(2535837-2535978)
chr8 (35-144)||(4994977-4995085)
chr8 (31-144)||(12273173-12273286)
chr8 (36-177)||(44664508-44664649)
chr8 (36-132)||(30459371-30459467)
chr8 (32-80)||(36186448-36186496)
chr8 (34-153)||(7983426-7983545)
chr8 (40-155)||(36186105-36186220)
chr8 (36-106)||(5960046-5960116)
chr8 (33-194)||(30710853-30711013)
chr8 (45-177)||(10445620-10445752)
chr8 (127-194)||(2266731-2266798)
chr8 (127-194)||(3041547-3041614)
chr8 (127-194)||(38845390-38845457)
chr8 (127-194)||(40775741-40775808)
chr8 (127-194)||(44406948-44407015)
chr8 (42-144)||(43181472-43181574)
chr8 (97-194)||(11674933-11675030)
chr8 (116-177)||(15230216-15230277)
chr8 (95-155)||(25124622-25124682)
chr8 (36-80)||(38862618-38862662)
chr8 (127-194)||(8747534-8747601)
chr8 (34-177)||(35634384-35634527)
chr8 (31-177)||(6471685-6471831)
chr8 (31-181)||(8746319-8746469)
chr8 (36-66)||(42803616-42803646)
chr8 (33-82)||(7313387-7313436)
chr8 (38-82)||(9065667-9065711)
chr8 (35-87)||(9065747-9065799)
chr8 (95-155)||(37542283-37542343)
[»] chr5 (88 HSPs)
chr5 (39-238)||(11740690-11740889)
chr5 (32-194)||(14194419-14194581)
chr5 (34-192)||(28269420-28269578)
chr5 (37-177)||(11741804-11741944)
chr5 (35-194)||(11761987-11762146)
chr5 (31-194)||(17202669-17202832)
chr5 (35-194)||(39453569-39453728)
chr5 (36-194)||(5024019-5024177)
chr5 (41-194)||(8322674-8322827)
chr5 (31-194)||(6150690-6150853)
chr5 (35-194)||(32242512-32242670)
chr5 (36-194)||(27587385-27587543)
chr5 (35-188)||(3528872-3529025)
chr5 (39-192)||(43159086-43159239)
chr5 (34-194)||(28770867-28771027)
chr5 (31-194)||(19892303-19892466)
chr5 (36-194)||(38475033-38475191)
chr5 (37-194)||(16156856-16157013)
chr5 (35-194)||(6301813-6301970)
chr5 (35-194)||(16083213-16083372)
chr5 (36-194)||(186689-186847)
chr5 (35-192)||(6301545-6301699)
chr5 (34-191)||(29646360-29646517)
chr5 (39-194)||(11047707-11047861)
chr5 (35-142)||(42265734-42265841)
chr5 (38-144)||(37992608-37992714)
chr5 (37-194)||(19517877-19518034)
chr5 (31-192)||(20814131-20814291)
chr5 (38-154)||(35512424-35512540)
chr5 (38-194)||(39453302-39453458)
chr5 (33-192)||(5993886-5994045)
chr5 (49-192)||(5994161-5994304)
chr5 (37-188)||(38442343-38442494)
chr5 (34-172)||(13963121-13963259)
chr5 (31-189)||(35512143-35512301)
chr5 (38-194)||(19892578-19892734)
chr5 (32-192)||(32242238-32242398)
chr5 (35-192)||(18247355-18247505)
chr5 (37-194)||(35920229-35920386)
chr5 (39-194)||(10684208-10684362)
chr5 (34-155)||(27937053-27937172)
chr5 (34-143)||(20814456-20814565)
chr5 (33-150)||(37991196-37991313)
chr5 (32-194)||(13962860-13963022)
chr5 (35-144)||(11761748-11761857)
chr5 (99-192)||(13362290-13362383)
chr5 (39-140)||(21257485-21257586)
chr5 (39-142)||(5835748-5835851)
chr5 (34-141)||(20840760-20840867)
chr5 (91-194)||(21265198-21265301)
chr5 (34-192)||(20840531-20840689)
chr5 (35-192)||(17202398-17202555)
chr5 (33-122)||(24547174-24547263)
chr5 (35-144)||(24547445-24547554)
chr5 (31-144)||(27587143-27587256)
chr5 (35-143)||(16157176-16157284)
chr5 (39-111)||(18670503-18670575)
chr5 (39-190)||(5024292-5024443)
chr5 (35-144)||(18670201-18670307)
chr5 (37-194)||(18247087-18247242)
chr5 (34-144)||(38475319-38475429)
chr5 (36-144)||(3529162-3529270)
chr5 (39-143)||(13362549-13362653)
chr5 (39-87)||(27937376-27937424)
chr5 (36-144)||(35920504-35920612)
chr5 (35-82)||(6150453-6150500)
chr5 (38-144)||(16082979-16083085)
chr5 (127-194)||(1506206-1506273)
chr5 (35-82)||(21265524-21265571)
chr5 (127-194)||(31482493-31482560)
chr5 (116-177)||(20153203-20153264)
chr5 (34-194)||(14194693-14194852)
chr5 (35-167)||(24141451-24141583)
chr5 (34-82)||(28269762-28269809)
chr5 (36-144)||(28771158-28771266)
chr5 (30-66)||(42265890-42265926)
chr5 (35-194)||(186419-186577)
chr5 (127-194)||(297105-297172)
chr5 (127-194)||(6757956-6758023)
chr5 (36-155)||(20152781-20152900)
chr5 (43-194)||(38442075-38442226)
chr5 (95-181)||(5255077-5255162)
chr5 (36-177)||(8875449-8875590)
chr5 (103-172)||(24547257-24547326)
chr5 (97-194)||(41930755-41930852)
chr5 (34-66)||(13362248-13362280)
chr5 (95-155)||(33871398-33871458)
chr5 (34-150)||(42067838-42067954)
[»] chr2 (56 HSPs)
chr2 (34-241)||(25231071-25231278)
chr2 (35-194)||(37895346-37895505)
chr2 (31-194)||(39498549-39498712)
chr2 (33-194)||(15848358-15848519)
chr2 (36-194)||(10712993-10713151)
chr2 (34-194)||(39423785-39423945)
chr2 (35-194)||(16099294-16099453)
chr2 (39-177)||(6588686-6588824)
chr2 (38-194)||(36479988-36480144)
chr2 (31-194)||(6658117-6658280)
chr2 (35-171)||(3555249-3555385)
chr2 (34-194)||(34448065-34448225)
chr2 (36-178)||(3556295-3556437)
chr2 (36-194)||(11163054-11163212)
chr2 (36-169)||(30729621-30729754)
chr2 (36-192)||(9076339-9076495)
chr2 (47-183)||(13692501-13692637)
chr2 (35-155)||(36755397-36755517)
chr2 (33-194)||(36382158-36382319)
chr2 (35-152)||(36382439-36382556)
chr2 (31-176)||(44045290-44045435)
chr2 (40-172)||(44713799-44713931)
chr2 (35-155)||(45556356-45556476)
chr2 (39-192)||(37895619-37895772)
chr2 (35-194)||(15848087-15848246)
chr2 (36-194)||(39423515-39423673)
chr2 (36-177)||(25230102-25230243)
chr2 (31-192)||(44714033-44714193)
chr2 (36-144)||(21370522-21370630)
chr2 (35-143)||(45556111-45556219)
chr2 (37-192)||(2318160-2318314)
chr2 (32-194)||(10712719-10712881)
chr2 (35-144)||(44044113-44044222)
chr2 (34-144)||(11163343-11163453)
chr2 (36-144)||(22051313-22051421)
chr2 (36-188)||(6306992-6307145)
chr2 (38-192)||(36479719-36479874)
chr2 (35-138)||(2318836-2318939)
chr2 (127-194)||(13995764-13995831)
chr2 (34-144)||(6657876-6657986)
chr2 (36-144)||(16099055-16099163)
chr2 (127-194)||(1695831-1695898)
chr2 (127-194)||(33062141-33062208)
chr2 (127-194)||(41248650-41248717)
chr2 (35-153)||(15604338-15604456)
chr2 (95-177)||(15604624-15604706)
chr2 (35-177)||(41587234-41587375)
chr2 (135-192)||(2318430-2318487)
chr2 (36-155)||(28226051-28226170)
chr2 (35-82)||(34447812-34447859)
chr2 (95-177)||(8710753-8710835)
chr2 (116-177)||(11830444-11830505)
chr2 (43-144)||(39498317-39498418)
chr2 (99-155)||(8342250-8342306)
chr2 (134-194)||(22051092-22051152)
chr2 (121-177)||(41588343-41588399)
[»] chr1 (95 HSPs)
chr1 (29-191)||(30711600-30711762)
chr1 (35-194)||(6367832-6367991)
chr1 (36-194)||(32917530-32917688)
chr1 (32-194)||(43759092-43759254)
chr1 (36-194)||(183221-183379)
chr1 (36-194)||(47999123-47999281)
chr1 (36-192)||(26024664-26024820)
chr1 (35-194)||(19017628-19017787)
chr1 (31-194)||(37578187-37578350)
chr1 (43-194)||(49722996-49723147)
chr1 (35-194)||(1103731-1103890)
chr1 (39-194)||(40210373-40210528)
chr1 (34-192)||(1841731-1841888)
chr1 (40-194)||(41099003-41099157)
chr1 (37-194)||(4960541-4960698)
chr1 (31-192)||(13914063-13914224)
chr1 (34-191)||(36694280-36694437)
chr1 (34-191)||(36710381-36710538)
chr1 (35-190)||(17661851-17662004)
chr1 (36-192)||(6367562-6367718)
chr1 (31-155)||(24009570-24009694)
chr1 (35-194)||(7820953-7821112)
chr1 (35-194)||(48779389-48779548)
chr1 (36-194)||(30711327-30711485)
chr1 (35-194)||(7821224-7821382)
chr1 (31-194)||(34464444-34464607)
chr1 (39-192)||(19323164-19323317)
chr1 (36-194)||(34850335-34850493)
chr1 (34-192)||(19322890-19323048)
chr1 (39-144)||(17692505-17692610)
chr1 (39-192)||(23209365-23209517)
chr1 (41-153)||(4960820-4960932)
chr1 (31-155)||(35473626-35473750)
chr1 (39-194)||(24009811-24009966)
chr1 (35-177)||(5734998-5735140)
chr1 (35-177)||(46899887-46900029)
chr1 (34-143)||(41098731-41098840)
chr1 (36-177)||(46899061-46899202)
chr1 (36-144)||(34849011-34849119)
chr1 (38-194)||(40210640-40210796)
chr1 (36-144)||(40772507-40772615)
chr1 (37-192)||(13914339-13914494)
chr1 (35-194)||(17662120-17662279)
chr1 (33-192)||(19017901-19018060)
chr1 (35-194)||(37578462-37578621)
chr1 (35-110)||(40772813-40772888)
chr1 (34-144)||(36694568-36694678)
chr1 (34-144)||(36710669-36710779)
chr1 (34-143)||(5734008-5734116)
chr1 (31-144)||(23209647-23209760)
chr1 (35-140)||(26024422-26024527)
chr1 (37-110)||(35152684-35152757)
chr1 (38-118)||(40439535-40439615)
chr1 (32-192)||(34464721-34464881)
chr1 (38-194)||(42248475-42248631)
chr1 (37-176)||(13300192-13300331)
chr1 (36-110)||(14879312-14879386)
chr1 (35-144)||(17691218-17691327)
chr1 (35-144)||(25647883-25647992)
chr1 (32-144)||(1841455-1841567)
chr1 (34-144)||(19515817-19515927)
chr1 (32-144)||(183511-183624)
chr1 (31-192)||(35152338-35152499)
chr1 (45-177)||(35038464-35038596)
chr1 (34-177)||(45750127-45750270)
chr1 (39-194)||(46163033-46163188)
chr1 (34-141)||(47999415-47999522)
chr1 (39-109)||(40435348-40435418)
chr1 (40-194)||(1103463-1103619)
chr1 (97-194)||(24905228-24905325)
chr1 (31-148)||(31197060-31197172)
chr1 (32-177)||(40714440-40714585)
chr1 (58-143)||(48691170-48691255)
chr1 (36-177)||(49955347-49955488)
chr1 (35-155)||(20760812-20760932)
chr1 (34-82)||(42533022-42533070)
chr1 (31-155)||(49955654-49955778)
chr1 (127-194)||(4716559-4716626)
chr1 (127-194)||(14879241-14879308)
chr1 (32-155)||(31050946-31051069)
chr1 (127-194)||(31514409-31514476)
chr1 (127-194)||(33442685-33442752)
chr1 (127-194)||(52134307-52134374)
chr1 (36-82)||(6518178-6518224)
chr1 (35-172)||(7231541-7231678)
chr1 (36-155)||(17188954-17189073)
chr1 (34-144)||(42534335-42534445)
chr1 (32-143)||(48692335-48692446)
chr1 (95-177)||(28324863-28324945)
chr1 (35-72)||(2828192-2828229)
chr1 (116-177)||(7371370-7371431)
chr1 (97-194)||(28011607-28011704)
chr1 (34-155)||(40714750-40714871)
chr1 (95-155)||(12905966-12906026)
chr1 (95-155)||(35040921-35040981)
[»] chr6 (44 HSPs)
chr6 (35-192)||(21627712-21627869)
chr6 (35-194)||(33517804-33517963)
chr6 (35-192)||(3059528-3059685)
chr6 (34-194)||(30804131-30804291)
chr6 (38-188)||(11434804-11434954)
chr6 (34-191)||(30726032-30726189)
chr6 (33-194)||(33647221-33647382)
chr6 (36-194)||(30337688-30337846)
chr6 (34-194)||(680998-681158)
chr6 (35-194)||(17734195-17734354)
chr6 (31-192)||(12080908-12081069)
chr6 (35-194)||(679865-680024)
chr6 (35-180)||(20651931-20652076)
chr6 (39-194)||(33517537-33517692)
chr6 (34-177)||(20651008-20651151)
chr6 (35-194)||(21627983-21628142)
chr6 (34-144)||(13379802-13379912)
chr6 (35-172)||(11393096-11393233)
chr6 (36-207)||(15115339-15115510)
chr6 (36-182)||(12407508-12407654)
chr6 (36-194)||(30725760-30725917)
chr6 (31-176)||(26463174-26463319)
chr6 (31-143)||(8090248-8090360)
chr6 (35-177)||(8089442-8089584)
chr6 (34-144)||(30337447-30337557)
chr6 (38-194)||(12080638-12080794)
chr6 (36-140)||(15116556-15116660)
chr6 (34-194)||(30803859-30804019)
chr6 (34-148)||(12408487-12408601)
chr6 (37-143)||(17734484-17734590)
chr6 (39-157)||(22617886-22618005)
chr6 (43-194)||(33646970-33647121)
chr6 (34-194)||(3059255-3059415)
chr6 (45-177)||(7160813-7160945)
chr6 (31-177)||(21836315-21836461)
chr6 (127-194)||(28000476-28000543)
chr6 (127-192)||(362961-363026)
chr6 (36-155)||(6517503-6517621)
chr6 (95-154)||(21836090-21836149)
chr6 (95-177)||(22502833-22502915)
chr6 (95-177)||(22503059-22503141)
chr6 (95-177)||(31407163-31407245)
chr6 (36-81)||(26464582-26464627)
chr6 (38-82)||(8418418-8418461)
[»] chr4 (102 HSPs)
chr4 (31-194)||(7452073-7452236)
chr4 (33-188)||(39539194-39539349)
chr4 (34-194)||(34765378-34765538)
chr4 (38-194)||(44967071-44967227)
chr4 (34-194)||(51692789-51692949)
chr4 (36-191)||(18831590-18831745)
chr4 (35-194)||(46661184-46661343)
chr4 (32-194)||(36008840-36009002)
chr4 (34-192)||(50418666-50418824)
chr4 (33-194)||(35027995-35028156)
chr4 (34-194)||(52909523-52909683)
chr4 (35-194)||(17355924-17356083)
chr4 (35-188)||(13058258-13058411)
chr4 (37-194)||(49879208-49879365)
chr4 (34-194)||(24349672-24349832)
chr4 (35-239)||(30642371-30642575)
chr4 (39-194)||(43155532-43155687)
chr4 (35-172)||(10780712-10780849)
chr4 (35-172)||(10974321-10974458)
chr4 (32-131)||(24411681-24411780)
chr4 (39-194)||(37248475-37248630)
chr4 (32-194)||(24711350-24711512)
chr4 (35-172)||(24350724-24350861)
chr4 (36-192)||(23613550-23613706)
chr4 (39-157)||(11108147-11108265)
chr4 (35-172)||(1179092-1179229)
chr4 (37-194)||(15507674-15507831)
chr4 (35-192)||(53129778-53129935)
chr4 (34-194)||(10781754-10781914)
chr4 (39-194)||(37976156-37976311)
chr4 (38-193)||(53701814-53701969)
chr4 (36-194)||(14802006-14802163)
chr4 (39-189)||(54086698-54086848)
chr4 (35-144)||(11448049-11448158)
chr4 (30-194)||(14801730-14801894)
chr4 (34-177)||(55867401-55867544)
chr4 (31-144)||(50418957-50419070)
chr4 (34-177)||(148042-148185)
chr4 (35-194)||(35028268-35028427)
chr4 (71-177)||(54713664-54713770)
chr4 (32-144)||(13058033-13058145)
chr4 (34-194)||(34765650-34765810)
chr4 (36-143)||(147319-147426)
chr4 (31-177)||(27068905-27069051)
chr4 (34-144)||(51692551-51692661)
chr4 (35-192)||(53129505-53129662)
chr4 (35-144)||(24711110-24711219)
chr4 (37-194)||(52909254-52909411)
chr4 (35-143)||(5368946-5369054)
chr4 (32-144)||(7451830-7451942)
chr4 (36-155)||(5369176-5369295)
chr4 (33-192)||(37976425-37976584)
chr4 (38-144)||(37248238-37248344)
chr4 (34-144)||(44967358-44967468)
chr4 (38-187)||(17356199-17356348)
chr4 (35-144)||(18831348-18831457)
chr4 (35-111)||(48528484-48528560)
chr4 (44-144)||(49879496-49879596)
chr4 (31-194)||(15507943-15508105)
chr4 (35-144)||(23613308-23613417)
chr4 (33-194)||(35508510-35508671)
chr4 (36-192)||(8439496-8439651)
chr4 (38-106)||(16006151-16006219)
chr4 (38-194)||(24411360-24411516)
chr4 (34-144)||(43155816-43155926)
chr4 (35-177)||(54858559-54858701)
chr4 (34-111)||(41583584-41583661)
chr4 (113-194)||(42738108-42738189)
chr4 (45-177)||(50750896-50751028)
chr4 (32-144)||(54087015-54087127)
chr4 (35-110)||(1178056-1178130)
chr4 (50-177)||(10408174-10408301)
chr4 (127-194)||(34837165-34837232)
chr4 (127-194)||(38012409-38012476)
chr4 (126-228)||(32062679-32062779)
chr4 (45-155)||(45463082-45463192)
chr4 (55-148)||(33247558-33247651)
chr4 (58-111)||(48529916-48529969)
chr4 (117-194)||(53702082-53702159)
chr4 (31-124)||(54435437-54435530)
chr4 (31-111)||(55866106-55866184)
chr4 (33-144)||(36009133-36009245)
chr4 (45-177)||(39667061-39667193)
chr4 (116-155)||(5818082-5818121)
chr4 (127-194)||(9144857-9144924)
chr4 (127-194)||(22567038-22567105)
chr4 (127-194)||(32950381-32950448)
chr4 (35-66)||(54713615-54713646)
chr4 (45-155)||(11523958-11524068)
chr4 (97-155)||(27149303-27149361)
chr4 (90-144)||(39538134-39538188)
chr4 (35-177)||(50503824-50503966)
chr4 (95-177)||(52573287-52573369)
chr4 (97-194)||(9400580-9400677)
chr4 (36-153)||(10407889-10408006)
chr4 (116-177)||(27891664-27891725)
chr4 (116-177)||(51859487-51859548)
chr4 (95-155)||(3032641-3032701)
chr4 (35-155)||(27069217-27069337)
chr4 (35-111)||(40387466-40387542)
chr4 (34-154)||(50504133-50504253)
chr4 (99-155)||(54858867-54858923)
[»] chr7 (79 HSPs)
chr7 (39-194)||(27991978-27992133)
chr7 (35-194)||(32053142-32053301)
chr7 (32-194)||(48788799-48788961)
chr7 (31-194)||(13386017-13386180)
chr7 (31-194)||(17102259-17102422)
chr7 (35-194)||(2640177-2640336)
chr7 (57-188)||(17885649-17885780)
chr7 (35-194)||(28469009-28469167)
chr7 (34-176)||(17886778-17886920)
chr7 (36-177)||(33808323-33808464)
chr7 (34-194)||(42731689-42731849)
chr7 (36-159)||(42362450-42362573)
chr7 (35-189)||(6253715-6253869)
chr7 (35-152)||(10936106-10936223)
chr7 (37-194)||(42019598-42019755)
chr7 (35-155)||(24389094-24389214)
chr7 (34-194)||(28469278-28469438)
chr7 (32-194)||(5457177-5457339)
chr7 (33-194)||(24388816-24388977)
chr7 (35-172)||(27396628-27396765)
chr7 (41-194)||(40379774-40379927)
chr7 (31-144)||(45010924-45011037)
chr7 (31-194)||(10935789-10935952)
chr7 (38-194)||(19204728-19204884)
chr7 (36-144)||(40380004-40380112)
chr7 (126-237)||(12229299-12229410)
chr7 (36-110)||(37657191-37657265)
chr7 (31-192)||(27396867-27397028)
chr7 (37-194)||(3914408-3914560)
chr7 (36-192)||(42731419-42731575)
chr7 (39-194)||(37656855-37657010)
chr7 (96-194)||(33809374-33809472)
chr7 (35-144)||(17102019-17102128)
chr7 (35-144)||(22871597-22871706)
chr7 (35-144)||(27991738-27991847)
chr7 (35-144)||(47945356-47945465)
chr7 (35-144)||(47950786-47950895)
chr7 (37-144)||(6253472-6253579)
chr7 (95-194)||(22871367-22871466)
chr7 (35-114)||(32298776-32298855)
chr7 (36-177)||(18087625-18087766)
chr7 (31-144)||(32299025-32299138)
chr7 (35-143)||(6571012-6571120)
chr7 (37-153)||(47946785-47946901)
chr7 (37-153)||(47952215-47952331)
chr7 (33-112)||(28105498-28105577)
chr7 (36-114)||(43123175-43123253)
chr7 (32-105)||(20426689-20426762)
chr7 (37-194)||(23181264-23181421)
chr7 (35-143)||(19204488-19204596)
chr7 (36-194)||(2640448-2640607)
chr7 (34-177)||(18086287-18086430)
chr7 (74-177)||(43124439-43124542)
chr7 (36-110)||(18670217-18670291)
chr7 (36-177)||(32068381-32068522)
chr7 (35-82)||(29141558-29141605)
chr7 (127-194)||(30948251-30948318)
chr7 (127-194)||(34928741-34928808)
chr7 (127-194)||(39686625-39686692)
chr7 (99-177)||(25628541-25628619)
chr7 (45-155)||(32934357-32934467)
chr7 (95-177)||(42618196-42618278)
chr7 (35-144)||(13384501-13384610)
chr7 (50-155)||(22081866-22081971)
chr7 (33-82)||(29144364-29144413)
chr7 (34-82)||(20425476-20425524)
chr7 (55-155)||(25628785-25628885)
chr7 (31-155)||(33828281-33828405)
chr7 (55-142)||(16803967-16804054)
chr7 (35-82)||(30127440-30127487)
chr7 (127-194)||(32680686-32680753)
chr7 (127-194)||(37657120-37657187)
chr7 (39-82)||(42019979-42020022)
chr7 (31-177)||(43266261-43266407)
chr7 (99-172)||(6571240-6571313)
chr7 (95-155)||(25453187-25453247)
chr7 (95-155)||(25453435-25453495)
chr7 (95-155)||(32068155-32068215)
chr7 (99-155)||(46205616-46205672)
[»] chr3 (72 HSPs)
chr3 (45-194)||(23457988-23458137)
chr3 (34-194)||(19740921-19741081)
chr3 (32-192)||(23458251-23458411)
chr3 (39-194)||(46475051-46475205)
chr3 (36-194)||(36417958-36418116)
chr3 (38-194)||(43384553-43384709)
chr3 (35-192)||(33689381-33689537)
chr3 (32-172)||(40758402-40758542)
chr3 (34-194)||(9367739-9367899)
chr3 (37-192)||(53756995-53757150)
chr3 (39-155)||(26463635-26463751)
chr3 (39-154)||(36417691-36417806)
chr3 (36-194)||(9294228-9294386)
chr3 (32-194)||(33689649-33689811)
chr3 (31-144)||(41558003-41558116)
chr3 (91-154)||(42855615-42855678)
chr3 (40-177)||(41558169-41558306)
chr3 (36-144)||(3850447-3850555)
chr3 (39-155)||(42343040-42343156)
chr3 (34-144)||(2796177-2796287)
chr3 (34-143)||(40033777-40033886)
chr3 (35-150)||(3849030-3849145)
chr3 (36-194)||(40758147-40758302)
chr3 (35-144)||(19741212-19741321)
chr3 (37-110)||(35712045-35712118)
chr3 (39-143)||(46474818-46474922)
chr3 (42-177)||(9368588-9368723)
chr3 (43-110)||(40033526-40033593)
chr3 (35-194)||(43384282-43384441)
chr3 (37-144)||(51994206-51994313)
chr3 (35-177)||(37778558-37778700)
chr3 (34-144)||(42342789-42342899)
chr3 (38-82)||(9292245-9292289)
chr3 (35-82)||(26463968-26464015)
chr3 (39-194)||(55052295-55052437)
chr3 (35-177)||(40788705-40788847)
chr3 (45-177)||(4323489-4323621)
chr3 (31-155)||(11910694-11910818)
chr3 (31-155)||(13948775-13948899)
chr3 (45-177)||(29118823-29118955)
chr3 (34-106)||(51993962-51994034)
chr3 (39-82)||(36150530-36150573)
chr3 (127-194)||(54466662-54466729)
chr3 (34-144)||(1079541-1079651)
chr3 (91-181)||(9294013-9294103)
chr3 (36-82)||(34142600-34142646)
chr3 (34-144)||(41988582-41988692)
chr3 (37-75)||(41989575-41989613)
chr3 (95-177)||(47551552-47551634)
chr3 (95-177)||(52032197-52032279)
chr3 (86-155)||(10307682-10307751)
chr3 (97-194)||(36314359-36314456)
chr3 (97-194)||(48322438-48322535)
chr3 (39-144)||(53756747-53756852)
chr3 (35-140)||(53856381-53856486)
chr3 (39-114)||(21783403-21783476)
chr3 (45-177)||(29685950-29686082)
chr3 (177-241)||(44961266-44961330)
chr3 (95-155)||(52032446-52032506)
chr3 (98-177)||(3469262-3469341)
chr3 (127-194)||(8041855-8041922)
chr3 (50-177)||(35643865-35643992)
chr3 (31-105)||(23272819-23272893)
chr3 (42-184)||(32431472-32431614)
chr3 (39-69)||(40506183-40506213)
chr3 (50-144)||(43608802-43608896)
chr3 (97-194)||(10770551-10770648)
chr3 (37-194)||(25108365-25108522)
chr3 (116-177)||(32306504-32306565)
chr3 (95-155)||(3469507-3469567)
chr3 (35-111)||(25107212-25107288)
chr3 (95-155)||(32306731-32306791)
[»] scaffold0075 (2 HSPs)
scaffold0075 (31-194)||(14424-14587)
scaffold0075 (36-110)||(14744-14818)
[»] scaffold0707 (1 HSPs)
scaffold0707 (35-155)||(6388-6508)
[»] scaffold0031 (2 HSPs)
scaffold0031 (36-194)||(69235-69393)
scaffold0031 (36-191)||(68965-69120)
[»] scaffold0775 (2 HSPs)
scaffold0775 (34-177)||(4960-5103)
scaffold0775 (99-177)||(6265-6343)
[»] scaffold0020 (2 HSPs)
scaffold0020 (39-194)||(139911-140066)
scaffold0020 (32-144)||(139668-139780)
[»] scaffold0005 (2 HSPs)
scaffold0005 (36-194)||(37564-37721)
scaffold0005 (30-194)||(37833-37997)
[»] scaffold0007 (2 HSPs)
scaffold0007 (35-194)||(2008-2170)
scaffold0007 (34-144)||(1767-1877)
[»] scaffold0128 (1 HSPs)
scaffold0128 (39-177)||(19860-19998)
[»] scaffold0042 (1 HSPs)
scaffold0042 (45-177)||(12065-12197)
[»] scaffold0295 (2 HSPs)
scaffold0295 (35-110)||(2484-2558)
scaffold0295 (127-194)||(2413-2480)
[»] scaffold0771 (1 HSPs)
scaffold0771 (31-155)||(915-1039)
[»] scaffold0599 (1 HSPs)
scaffold0599 (31-155)||(2388-2512)
[»] scaffold0328 (2 HSPs)
scaffold0328 (34-177)||(11425-11568)
scaffold0328 (95-177)||(11199-11281)
[»] scaffold0388 (1 HSPs)
scaffold0388 (32-177)||(12524-12669)
[»] scaffold0024 (1 HSPs)
scaffold0024 (127-192)||(141685-141750)
[»] scaffold0006 (2 HSPs)
scaffold0006 (95-154)||(221849-221908)
scaffold0006 (95-177)||(222074-222156)
[»] scaffold0220 (1 HSPs)
scaffold0220 (165-211)||(23360-23406)
[»] scaffold0559 (1 HSPs)
scaffold0559 (127-194)||(1472-1540)


Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 7295373 - 7295139
Alignment:
Q  19 ccatcaccatag-ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaacc 117  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||  |    
T  7295373 ccatcaccatagattttaggtttaaatatgtattttatccttgcaattatggatcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtc 7295274  T
Q  118 ttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggctctggtaattggtcaacccacac 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7295273 ttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggctctggtaattggtcaacccacac 7295174  T
Q  218 gttaaatgacaattttacccctatatatcttcatc 252  Q
    || ||||||||||||||||||||||||||||||||    
T  7295173 gtgaaatgacaattttacccctatatatcttcatc 7295139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 13186491 - 13186329
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||||||| | |    |||||||||||||||||||||||| ||||||| || |||||    
T  13186491 tttaggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaat 13186392  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | ||||||||||| || ||||||| ||| ||| |||||||||||| |||||||||||||||||    
T  13186391 catttaaaatttcgtcatttgaccaagttaatcactgccacgtcactaatttgatgacgtggc 13186329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 36928905 - 36928746
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||| |||||||||   ||||||||||||| | |||  ||||| |||||||||||||||||| ||||||| || |||||| |    
T  36928905 aggcttaaatatgtatttcatcgttgcaattagatatcgtttaaaaattggtctatgtatttgctaatccttgcaaactagccttgcaatcattaatcat 36928806  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  36928805 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 36928746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 38 - 194
Target Start/End: Original strand, 40317966 - 40318122
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||||||||||||||| || ||||||||||||   |||| |||||||||||||||||||||||| ||||||| || |||||| ||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcattta 40318065  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||| | || ||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  40318066 aaattgcgtcatttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 40318122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 7294103 - 7294233
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||| |||||||||  | |||||||||||| ||||||  |||||||||||||||| |||||| ||||||||||||||||| |||    
T  7294103 gcttaaatatgtatttcatc-ttgcaattagaggtcgtttaaaaattgatctctatattcgctaatccttgtaaactagccttgcattctttaatcattt 7294201  T
Q  137 aaaatttcatcctttgacccagtcaatgactg 168  Q
    ||||||||||||||||||||||| ||| ||||    
T  7294202 aaaatttcatcctttgacccagttaatcactg 7294233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 34685691 - 34685530
Alignment:
Q  30 gttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattcttta 129  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| | |||  |||||||||||||||||||||||| |||| || || |||    
T  34685691 gtttttggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggtctt-gtattcgctaatccttgcaaactagccttacaatcatta 34685593  T
Q  130 atcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||| ||||||||||| || ||||||| | | ||| |||| ||||||| |||||||||||||||    
T  34685592 atcatttaaaatttcgtcatttgaccaacttaatcactgtcacgtcactaatttgatgacgtg 34685530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 1425050 - 1425211
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    ||||| |||||||||||||| ||||||||||||| || |||||||||||| | || | |||||| ||||||||||||||||| ||||||| || ||||||    
T  1425050 ttaggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatc 1425149  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
     ||||||||||  |||||||||| | | ||| | |||||||||| |||||||||||||||||    
T  1425150 atttaaaatttagtcctttgaccaacttaatcattgccacgtcactaatttgatgacgtggc 1425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 38862988 - 38862855
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| || |||||||||||| | |||| |||||||||||||||||||||||| ||||||| || |||||| |||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 38862889  T
Q  139 aatttcatcctttgacccagtcaatgactgccac 172  Q
    |||||| |||||||||| | | ||| ||||||||    
T  38862888 aatttcgtcctttgaccaacttaatcactgccac 38862855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 4994653 - 4994813
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||| |||||| ||||||||||||||||| |||||| ||||||| || |||||    
T  4994653 tttaggcttaaatatgtatttcatcgttgcaattagggattgtttaaaaattgatctctgtattcgctaatccttggaaactagccttgcaatcattaat 4994752  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
      ||||||||||| || ||||||| | | ||| ||| |||||||  ||||| |||||||||    
T  4994753 tatttaaaatttcgtcttttgaccaacttaatcactaccacgtcgctaattcgatgacgtg 4994813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 12198948 - 12199108
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | || |  || ||||||||||||||||||||  |||||| || ||||||     
T  12198948 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatca 12199047  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| |||||||||| | | ||| |||| ||||||| |||||||||||||||||    
T  12199048 tttaaaatttcgtcctttgaccaatttaatcactgtcacgtcactaatttgatgacgtggc 12199108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 12443376 - 12443536
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | || |  || ||||||||||||||||||||  |||||| || ||||||     
T  12443376 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatca 12443475  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| |||||||||| | | ||| |||| ||||||| |||||||||||||||||    
T  12443476 tttaaaatttcgtcctttgaccaatttaatcactgtcacgtcactaatttgatgacgtggc 12443536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 34 - 186
Target Start/End: Original strand, 23663543 - 23663695
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||| |||||||||||||||||| || |||||||||||| | || | ||||||| ||||||||| |||||||||||| | || ||||||     
T  23663543 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatcattaatca 23663642  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgat 186  Q
    ||||||||||| |||||||||| | | ||| |||||||||||| |||||||||    
T  23663643 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgat 23663695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 38956100 - 38955942
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||||||||||||||||| |||||| ||||||| || |||||| ||    
T  38956100 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgtaaactagccttgcaatcattaatcatt 38956001  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||  |||||||| | | | ||| |||| ||||||| |||||||||||||||||    
T  38956000 taaaatttagtcctttgatcaacttaatcactgtcacgtcactaatttgatgacgtggc 38955942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 34177396 - 34177257
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||||| ||| ||||| || |||||||||||| | ||   ||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  34177396 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgtaaactagccttgcattctttaatcattta 34177297  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||| ||| |||||||| | |||||||||||| ||||    
T  34177296 aaatttcgtcccttgacccacttaatgactgccacatcat 34177257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 12272920 - 12273054
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||| | |||| ||| |||||||||||||||||||| ||||||| |  |||||| ||||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcattta 12273019  T
Q  138 aaatttcatcctttgacccagtcaatgactgccac 172  Q
    ||||||| |||||||||| | | ||| ||||||||    
T  12273020 aaatttcgtcctttgaccaatttaatcactgccac 12273054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 35 - 177
Target Start/End: Complemental strand, 34061757 - 34061615
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||||||| ||||||||||||||    |||||||||||| ||||   ||||||||||||||||||||| |  ||||||||||||||||| |    
T  34061757 aggcttaaatatgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatcat 34061658  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||| |||||||||| ||| ||| ||||||| |||||    
T  34061657 ttaaaatttcgtcctttgaccaagttaatcactgccatgtcat 34061615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 34176443 - 34176582
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||| | |     |||||| ||||||||||||||||  ||||||||||||||||     
T  34176443 taggtttaaatatgtatttcatccttgcaattatgg-tcgtttaaaaattggtta---tattcgttaatccttgcaaactagtcttgcattctttaatca 34176538  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||||||||||||||||||| ||| |||| || |||||    
T  34176539 tttaaaatttcatcctttgacccagttaatcactgtcaggtcat 34176582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 39072074 - 39071934
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||||||||||||||| | || |||||||||||| | || | ||||||| |||||||||||||||| ||||||| || ||||    
T  39072074 ttttaggcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtccctgtattcg-taatccttgcaaactagccttgcaatcattaa 39071976  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    || ||||||||||| |||||||||| | | ||| ||||||||    
T  39071975 tcatttaaaatttcgtcctttgaccaacttaatcactgccac 39071934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 20385568 - 20385726
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||||||||||||||||||||||||  |||||| || |||||| ||    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 20385667  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||| |   |||||| ||| |||||||||||| | ||| | |||||||||    
T  20385668 taaaatttcgtccctgagcccagttaattactgccacgtcactgattagctgacgtggc 20385726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 172
Target Start/End: Original strand, 8316652 - 8316789
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||| |||||||||||||||||| || |||||||||||| | ||   ||||||| |||||||||||||||| ||||||| || |||||| |    
T  8316652 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcattaatcat 8316751  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    |||||||||| |||||||||| | | ||| ||||||||    
T  8316752 ttaaaatttcgtcctttgaccaacttaatcactgccac 8316789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 31608946 - 31608783
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| |||||||||| |||||||||||||||||||| || |||||||||||| | ||   ||||||||||||||||||||  || ||||||||| | |||    
T  31608946 tttttggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaa 31608847  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||| ||| |   |||| | ||| |||||||||||| |||||||||| ||||||    
T  31608846 tcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatggcgtggc 31608783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 23663944 - 23663834
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | |||| ||| ||||||||||| ||||  || ||||||||| |||||||     
T  23663944 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 23663845  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  23663844 tttaaaatttc 23663834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 39071676 - 39071834
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| | || | ||| |||||||||||  |||  || ||||||||| ||||||| ||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 39071775  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||| |   |||| | ||| |||||| ||||| |||||||| ||||||||    
T  39071776 taaaatttcgtccctctccccacttaatcactgccgcgtcactaatttgacgacgtggc 39071834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 20386859 - 20386750
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||| ||| |  |||||| |    
T  20386859 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaatcat 20386760  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  20386759 ttaaaatttc 20386750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 33357493 - 33357574
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaac 112  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| ||||   ||||||||||||||||||||||    
T  33357493 ttttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatgtattcgctaatccttgcaaac 33357574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 13186059 - 13186218
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | |    ||| |||||||||||  |||  || ||||||||| ||||||| |    
T  13186059 aggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 13186158  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| ||  |   |||| | ||| |||||||||||| |||||| ||||||||||    
T  13186159 ttaaaatttcgtctctctccccacttaatcactgccacgtcactaatttaatgacgtggc 13186218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 40318393 - 40318234
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || | ||||||||||   ||   ||| ||||||||||| ||||  || ||||||||| ||||||| |    
T  40318393 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 40318294  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||   | || | ||| ||||||| |||| |||||||||||||||||    
T  40318293 ttaaaatttcgtccttctcctcacttaatcactgccatgtcactaatttgatgacgtggc 40318234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 16388954 - 16388796
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| || || ||||||||| | |    ||| | ||||||||| ||||  || ||||||||| ||||||| ||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 16388855  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||| |   |||| | ||| |||||||||||| |||||||||||||||||    
T  16388854 taaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 16388796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 30712143 - 30711987
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||| |||||||| |||| ||  ||||||||||| | || | ||||| |||||||||||||||||| ||||||| || |||||| |||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtc-ctgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30712045  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||| ||| |  ||||||| ||| |||||||| ||| | ||| | |||||||||    
T  30712044 aaaatttcgtccctgaacccagttaattactgccacatcactgattagctgacgtggc 30711987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 30719920 - 30719764
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||| |||||||| |||| ||  ||||||||||| | || | ||||| |||||||||||||||||| ||||||| || |||||| |||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtc-ctgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30719822  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||| ||| |  ||||||| ||| |||||||| ||| | ||| | |||||||||    
T  30719821 aaaatttcgtccctgaacccagttaattactgccacatcactgattagctgacgtggc 30719764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 23698676 - 23698564
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||| ||||||| ||||| || |||||||||||| | || | ||| ||||||||||| ||||  || ||||||||| ||||||    
T  23698676 tttaggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaat 23698577  T
Q  132 cgtttaaaatttc 144  Q
    | |||||||||||    
T  23698576 catttaaaatttc 23698564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 46 - 193
Target Start/End: Original strand, 22915399 - 22915546
Alignment:
Q  46 tgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttca 145  Q
    ||||||| || ||||||||||  |||| ||||||||| | ||   ||| |||||||||||||||||||| ||||||| || |||||| |||| ||||||     
T  22915399 tgtatttgattcttgcaattagagatcatttaaaaattggtccatgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttacaatttcg 22915498  T
Q  146 tcctttgacccagtcaatgactgccacgtcattaatttgatgacgtgg 193  Q
    || ||||||| | | ||| | |||||||||| ||||||||||||||||    
T  22915499 tcttttgaccaatttaatcattgccacgtcactaatttgatgacgtgg 22915546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 34060486 - 34060601
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||| | ||   ||| ||||||||||||||||| |  | |||||||||||||||    
T  34060486 ttaggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaattgtcgttgcattctttaatc 34060585  T
Q  133 gtttaaaatttcatcc 148  Q
     ||||||| |||||||    
T  34060586 atttaaaacttcatcc 34060601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 54 - 192
Target Start/End: Complemental strand, 35756993 - 35756854
Alignment:
Q  54 atccttgcaattatgga-tcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttg 152  Q
    ||||||||||||| ||  |||||||||||| | |||| ||||||| ||||||||||||||||  |||||| || |||||| ||||||||||| |||||||    
T  35756993 atccttgcaattagggggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttg 35756894  T
Q  153 acccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||| | | ||  |||||||||||| ||||  |||||||||    
T  35756893 accaacttaagcactgccacgtcactaatacgatgacgtg 35756854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 2534695 - 2534836
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||| | |    ||| ||||||||||||||||||||  |||||||| ||||||| ||    
T  2534695 ggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatcatt 2534794  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||| |   |||||| ||| |||||||| ||||    
T  2534795 taaaatttcgtccctattcccagttaatcactgccacatcat 2534836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 8317017 - 8316908
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | ||   ||| ||||||||||| ||||  || ||||||||| ||||||| |    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 8316918  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  8316917 ttaaaatttc 8316908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 23698308 - 23698445
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatgga-tcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||||||| ||||||||||||| ||  ||||||||||||   || | ||| |||||||| ||||||||||| ||||||| || ||||||      
T  23698308 ggcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatcattaatcag 23698407  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    |||||||||| |||||||||| | | ||| ||||||||    
T  23698408 ttaaaatttcgtcctttgaccaatttaatcactgccac 23698445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 16388574 - 16388629
Alignment:
Q  27 atagttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  16388574 atagttttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaat 16388629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 4406088 - 4405930
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||| ||||| || | |||||||||| | ||   ||||| | ||||||||||||  || ||||||| | ||||||| ||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatt 4405989  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||| |   |||| | ||| |||| ||||||| |||||||| ||||||||    
T  4405988 taaaatttcgtccctcttcccacttaatcactgtcacgtcactaatttgaagacgtggc 4405930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 192
Target Start/End: Original strand, 36928479 - 36928632
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||   ||| |||||| || |||||||||||| | |||  ||| |||||||||||  |||  || ||||||||| ||||||| ||    
T  36928479 ggcttaaatatgtatttc---ctttcaattaagggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 36928575  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||| ||| |   |||| | ||| |||||||||||| |||||||||||||||    
T  36928576 taaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 36928632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 38955703 - 38955815
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||| | ||   ||| ||||||||||| | ||  || || |||||| ||||||| ||    
T  38955703 ggcttaaatatgtatttgatccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatcctggtaatttacccctgcattgtttaatcatt 38955802  T
Q  136 taaaatttcatcc 148  Q
    |||||||||||||    
T  38955803 taaaatttcatcc 38955815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 142
Target Start/End: Complemental strand, 22915787 - 22915680
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| |||||||||| || ||||||||||||||| | ||   ||| ||||||||| | ||||  || ||||||||| ||||||| |    
T  22915787 aggcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcat 22915688  T
Q  135 ttaaaatt 142  Q
    ||||||||    
T  22915687 ttaaaatt 22915680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 177
Target Start/End: Complemental strand, 25124994 - 25124848
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| |||||||  |||| |||| |||||||||||| |  || |||||||||   |||| ||| |||||||| || ||||  || ||||||||| |||||    
T  25124994 ttttgggcttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaa 25124895  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    || |||||||||||||||||||| | | | ||| |||||||||||||    
T  25124894 tcatttaaaatttcatcctttgaacaacttaatcactgccacgtcat 25124848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 31608526 - 31608599
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgca 109  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||||| ||||   |||||||||||||||||||    
T  31608526 aggcttaaacatgtatttcatccttgtaattagggatcgtttaaaaattgatc-atgtattcgctaatccttgca 31608599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 2535978 - 2535837
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||| |||||||||||| ||| |||||||| || || ||||||||| | || | ||| ||| ||||||| ||||| || |||| ||   ||||||| ||    
T  2535978 ggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatt 2535879  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||| |||||||| | |||||||||||| ||||    
T  2535878 taaaatttcgtcccttgacccacttaatgactgccacatcat 2535837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 4995085 - 4994977
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || || ||||||||| | || | ||| |||||||||||  |||  || ||||||||| ||||||| |    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtc-ctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 4994987  T
Q  135 ttaaaatttc 144  Q
    || |||||||    
T  4994986 ttcaaatttc 4994977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 12273286 - 12273173
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||| |||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||| ||||||   |||  || ||||||||| |||||    
T  12273286 ttttaggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaa 12273187  T
Q  131 tcgtttaaaatttc 144  Q
    || |||||||||||    
T  12273186 tcatttaaaatttc 12273173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 44664508 - 44664649
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||| ||||| |||| |||||||||||| |  || |||||||||   || | ||| ||| ||||||| ||||  |||||||||||| ||||||| ||    
T  44664508 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcatt 44664607  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| || ||||||| | | ||| |||||||||||||    
T  44664608 taaaatttcgtcatttgaccaacttaatcactgccacgtcat 44664649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 30459371 - 30459467
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    |||||||||||||||||||||||| |||||| |  ||||||||||||   |||  |||||| |||||||||||||| ||   |||||||||||||||    
T  30459371 ggcttaaatatgtatttcatccttacaattaggcgtcgtttaaaaattagtctatgtattcactaatccttgcaaattacaattgcattctttaatc 30459467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 36186496 - 36186448
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaa 80  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||    
T  36186496 tttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaa 36186448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 7983426 - 7983545
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||| ||||| |||| |||||||||||| |  || |||||||||   || | ||| ||||||||||| ||||  || ||||||||| |||||||     
T  7983426 taggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 7983525  T
Q  134 tttaaaatttcatcctttga 153  Q
    ||||||||||| ||||||||    
T  7983526 tttaaaatttcgtcctttga 7983545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 36186105 - 36186220
Alignment:
Q  40 taaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaa 139  Q
    ||||||||||||||||| ||| ||||| || || ||||||| | | || | ||||||||||||||||||||||||   ||||| || |||||  ||||||    
T  36186105 taaatatgtatttcatctttgtaattaggggtcttttaaaatttggtccctgtattcgctaatccttgcaaactagtattgcaatcattaattatttaaa 36186204  T
Q  140 atttcatcctttgacc 155  Q
    ||||| || |||||||    
T  36186205 atttcgtcttttgacc 36186220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 5960046 - 5960116
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatcctt 106  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||| | || | ||| ||||||||||||    
T  5960046 ggcttaaacatgtatttcatccttgcaattagggatcgattaaaaattgctccctgtaatcgctaatcctt 5960116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 30710853 - 30711013
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    ||||| |||||||||||||| ||| |||||||||  | | |||||||| | | ||   ||||||||||||  |||||||||||||||||| || ||||||    
T  30710853 ttaggtttaaatatgtatttgatctttgcaattagaggttgtttaaaattggttcat-gtattcgctaatttttgcaaactaaccttgcaatcattaatc 30710951  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
     ||||||||||| ||| |   |||||| ||| |||| ||||||| | ||| | |||||||||    
T  30710952 atttaaaatttcgtccctgagcccagttaattactgtcacgtcactgattagttgacgtggc 30711013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 10445752 - 10445620
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| |||| |||||||||||| |  || |||||||||   || | ||| ||||||||||| ||||  || ||||||||| ||||||| |||||||||||    
T  10445752 atgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10445653  T
Q  145 atcctttgacccagtcaatgactgccacgtcat 177  Q
     || ||||||| | | ||| |||||||||||||    
T  10445652 gtcttttgaccaacttaatcactgccacgtcat 10445620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 2266798 - 2266731
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||||||||| ||||||||||| | | ||| ||| |||| ||| |||||||||||||||||    
T  2266798 ttaatcgtttaaaatttgatcctttgaccaaattaatcacttccacatcactaatttgatgacgtggc 2266731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 3041547 - 3041614
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  3041547 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 3041614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 38845390 - 38845457
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  38845390 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 38845457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 40775741 - 40775808
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  40775741 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 40775808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 44406948 - 44407015
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  44406948 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 44407015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 43181574 - 43181472
Alignment:
Q  42 aatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaat 141  Q
    |||||||||||| || ||| ||||| ||||||||||||||| ||||   | | ||| ||||||||| ||| || |||| |||| ||||||| ||||||||    
T  43181574 aatatgtatttcgtctttgtaattagggatcgtttaaaaattgatccatgcaatcgttaatccttgtaaattagccttacattgtttaatcatttaaaat 43181475  T
Q  142 ttc 144  Q
    |||    
T  43181474 ttc 43181472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 11675030 - 11674933
Alignment:
Q  97 gctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||||  || ||||||| |  |||||| ||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  11675030 gctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggc 11674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 15230277 - 15230216
Alignment:
Q  116 ccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||||||| ||||||||||| |||||||||| | | ||| |||||||||||||    
T  15230277 ccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcat 15230216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 25124622 - 25124682
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| ||||||||||    
T  25124622 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacc 25124682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 38862618 - 38862662
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaa 80  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||    
T  38862618 ggcttaaatatgtatttcatccttgcaattaagggccgtttaaaa 38862662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 8747601 - 8747534
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||||||||||| ||| || ||||| | ||| || ||||||||| |||||||||||||||||    
T  8747601 ttaatcatttaaaatttcgtcccttaacccacttaatcaccgccacgtcagtaatttgatgacgtggc 8747534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 35634527 - 35634384
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| |||||||||||  |||  || ||||||||| |||||||     
T  35634527 taggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 35634428  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| |||||| ||| | | ||| |||| ||||||||    
T  35634427 tttaaaatttcgtcctttaaccaacttaatcactgtcacgtcat 35634384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 6471685 - 6471831
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||| ||||  |||| |||| |||||||||||| |  || |||||||||   ||||  || ||||||||||| ||||  || ||||||||| |||||    
T  6471685 ttttaggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttacccttgcattgtttaa 6471784  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    || ||||||||||| || ||| | | | | ||| |||||||||||||    
T  6471785 tcatttaaaatttcgtctttttatcaacttaatcactgccacgtcat 6471831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 8746319 - 8746469
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| ||||||| ||||| |||| ||| |||||||| || || ||||||||||| || | ||| ||| ||||| |  |||| || |||||||  | ||||    
T  8746319 tttttggcttaagtatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatcgtgacaaattacccttgcaaaccttaa 8746418  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaat 181  Q
    || ||||||||||| ||  |||||||| | ||| || ||||||||| ||||    
T  8746419 tcatttaaaatttcgtcacttgacccacttaatcaccgccacgtcagtaat 8746469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 42803646 - 42803616
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaatta 66  Q
    |||||||||||||||||||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaatta 42803616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 7313436 - 7313387
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||||||||||||||||||| |||| ||||| || || ||||||||||||    
T  7313436 ttaggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaat 7313387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 9065667 - 9065711
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    ||||||||||||||||||| ||| ||||| || ||||||||||||    
T  9065667 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaat 9065711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 9065799 - 9065747
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatc 87  Q
    ||||||||||||||||| |||||||||||||| || |  ||||||||| ||||    
T  9065799 aggcttaaatatgtattccatccttgcaattaggggttatttaaaaattgatc 9065747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 37542283 - 37542343
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| | ||||||||    
T  37542283 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgttctttgacc 37542343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 88)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 39 - 238
Target Start/End: Original strand, 11740690 - 11740889
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||||    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaaactagccttgcattctttaatcatttaa 11740789  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggctctggtaattggtcaacccacacgttaaatgacaattttacccc 238  Q
    |||||  |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  11740790 aattttgtcctttgacccagttaatgactgtcacgtcattaatttgatgacgtggctctggtaattggtcaacccacacgtgaaatgacagttttacccc 11740889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 14194419 - 14194581
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||| | || | ||||||||||||||||||||||||  |||||| || |||||    
T  14194419 tttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaat 14194518  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | ||||||||||| |||||||||| | | ||| |||||||| ||| ||||| |||||||||||    
T  14194519 catttaaaatttcgtcctttgaccaacttaatcactgccacatcactaattcgatgacgtggc 14194581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 28269420 - 28269578
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || ||||||     
T  28269420 taggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatcattaatca 28269519  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||||| |||||||||| | | ||| |||||||||||| ||||| |||||||||    
T  28269520 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtg 28269578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 11741944 - 11741804
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||||||| ||||| || || ||||||||||| |||| ||||||||||||| |||||||||| ||||||||||||||||| |||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctttaatcattt 11741845  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||| |||||||||||||| ||| |||| || |||||    
T  11741844 aaaatttcgtcctttgacccagttaatcactgtcaggtcat 11741804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 11762146 - 11761987
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| |    
T  11762146 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 11762047  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||  |||||||||| | | ||| |||||||||||| ||||||||||| |||||    
T  11762046 ttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgatgtggc 11761987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 17202832 - 17202669
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| ||||||||||||||||||||||||||||||| || |||||||||||||| || | ||||||||||||||||||||||||  |||||| || ||||    
T  17202832 tttttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaa 17202733  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||| || ||||||| | | ||| |||||||||||| ||||| ||||| |||||    
T  17202732 tcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaattcgatgatgtggc 17202669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 39453728 - 39453569
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || || ||||||||| | || | ||||||||||||| |||||||||| ||||||| || |||||| |    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaatcat 39453629  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  39453628 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 39453569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 5024019 - 5024177
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| |||    |||||||||||||||||||||||| ||||||| ||  ||||| ||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatccttgcaaactagccttgcaatcactaatcatt 5024118  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  5024119 taaaattttgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 5024177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 8322827 - 8322674
Alignment:
Q  41 aaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaa 140  Q
    |||||||||||||||||||||||||| || |||||||||||| | || ||||||||| |||||||||||||||| ||||||| || |||||| |||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaa 8322728  T
Q  141 tttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||| |||||||||| | | ||| |||||| ||||| ||||| |||||||||||    
T  8322727 tttcgtcctttgaccaacttaatcactgccgcgtcactaattcgatgacgtggc 8322674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 6150853 - 6150690
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||   ||   ||||||| ||||| |||||||||| ||||||| || ||||    
T  6150853 ttttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaa 6150754  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||| |||||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  6150753 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 6150690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 32242670 - 32242512
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || | ||||||||||   || | |||||||||||||||||||||||| ||||||| || |||||| |    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtc-ctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 32242572  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  32242571 ttaaaattttgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 32242512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 27587543 - 27587385
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||| | ||   |||||||||||||||||||||||| ||||||| || |||||| ||    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 27587444  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||  |||||||||| | | ||| ||||| |||||| |||||||||||||||||    
T  27587443 taaaatttagtcctttgaccaacttaatcactgctacgtcactaatttgatgacgtggc 27587385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 188
Target Start/End: Original strand, 3528872 - 3529025
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||||| |||||||||||||||||| ||||||| || |||||| |    
T  3528872 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatcgttaatcat 3528971  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatga 188  Q
    |||||||||  |||||||||| | | ||| |||||||||||| |||||||||||    
T  3528972 ttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatga 3529025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 192
Target Start/End: Complemental strand, 43159239 - 43159086
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| || |||||||||||| | ||   |||||||||||||||| ||||||| ||||||| || |||||| |||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatcattaatcatttaa 43159140  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||| |||||||||| | | ||| |||||||||||| ||||| |||||||||    
T  43159139 aatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtg 43159086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 28770867 - 28771027
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| |||| || || || |||     
T  28770867 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattgatca 28770966  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||  || ||||||| | | ||| |||||||||||| |||||||||||||||||    
T  28770967 tttaaaatttagtcatttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 28771027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 19892303 - 19892466
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||| ||||||||||||||||||||||||||||| || |||||||||||| | ||   ||||||| |||||||||||||||| ||||| | || ||||    
T  19892303 ttttagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaa 19892402  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||| |||||||| | | | ||| |||||||||| | |||||||||||||||||    
T  19892403 tcatttaaaatttcgtcctttgatcaacttaatcactgccacgtaactaatttgatgacgtggc 19892466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 38475033 - 38475191
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||| | |||||||  | || ||||||||| | ||   |||||||||||||||||||||||||||||||| || |||||| ||    
T  38475033 ggcttaaatatgtatttcatcatagcaattaaaggtcatttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcatt 38475132  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| || ||||||| | | ||| |||||||||||| |||||||||||||||||    
T  38475133 taaaatttcgtcatttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 38475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 16156856 - 16157013
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    ||||||||||||||||||| |||||||||| || |||||||||||| | |||  ||||||| ||||||||||||||||  |||||| || |||||| |||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcattt 16156955  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||| |||||||||| | | ||| |||||||||||| ||||| |||||| ||||    
T  16156956 aaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacatggc 16157013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 6301970 - 6301813
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||  ||||||||| || |||||||||||| | ||   ||||||| ||||||||||||||||  |||||| || |||||| |    
T  6301970 aggcttaaatatgtatttcat--ttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaactagtcttgcaatcattaatcat 6301873  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  6301872 ttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgacgtggc 6301813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 16083372 - 16083213
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | |     |||||||||||||||||||||||  |||||| || |||||| |    
T  16083372 aggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggttcatatattcgctaatccttgcaaactagtcttgcaatcattaatcat 16083273  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |  ||||||| | | ||| ||||||| |||| |||||||||||||||||    
T  16083272 ttaaaatttcgttatttgaccaacttaatcactgccatgtcactaatttgatgacgtggc 16083213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 186847 - 186689
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||||||||||||||  | |||||||||||| | || | ||||| ||||||| |||||||||| ||||||| || |||||| ||    
T  186847 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcattaatcatt 186748  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| |||||||||| | | ||| | || ||||||| ||||| |||||||||||    
T  186747 taaaatttcgtcctttgaccaacttaatcattgtcacgtcactaattcgatgacgtggc 186689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 6301545 - 6301699
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||| | ||   ||||||||||||||||||||||||  |||||| || |||||  |    
T  6301545 aggcttaaatatgtatttcat--ttgcaattatgg-tcgtttaaaaattggtccttgtattcgctaatccttgcaaactagtcttgcaatcattaattat 6301641  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||    
T  6301642 ttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgacgtg 6301699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 29646360 - 29646517
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||| ||||| || || ||||||||| | ||   |||||||||||||||||||||||| |||| || || ||||||     
T  29646360 taggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaaactagccttccaatcattaatca 29646459  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgt 191  Q
    |||||||||| ||||||||||| | | ||| |||||||||||| ||||| ||||||||    
T  29646460 tttaaaattttatcctttgaccaacttaatcactgccacgtcactaattcgatgacgt 29646517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 11047861 - 11047707
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    ||||||||||||||||||||||||| || || |||||||||||| | ||   |||||| ||||||||||||||||| ||||||| || |||||| |||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtcat-gtattcactaatccttgcaaactagccttgcaatcattaatcatttaa 11047763  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| |||||||||| | | ||| |||||||||||| |||||  ||||||||||    
T  11047762 aatttcgtcctttgaccaacttaatcactgccacgtcactaattcaatgacgtggc 11047707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 42265734 - 42265841
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||||||||||||  |    
T  42265734 aggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcattctttaatgat 42265833  T
Q  135 ttaaaatt 142  Q
    ||||||||    
T  42265834 ttaaaatt 42265841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 37992714 - 37992608
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    |||||||||||||||||||| |||||||| || |||||||||||||||||||  |||| ||||||| |||||||||| ||||||| || |||||||||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtcgtttaaaaatcgatctctctatttgctaatctttgcaaactagccttgcaatcattaatcgttta 37992615  T
Q  138 aaatttc 144  Q
    |||||||    
T  37992614 aaatttc 37992608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 19518034 - 19517877
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||||||||||||| || | ||||||||||   ||   ||||||||||||| |||||||||| ||||||| || |||||| |||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggtagtttaaaaattagtccatgtattcgctaatctttgcaaactagccttgcaatcattaatcattt 19517935  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||  || ||||||| | | ||| ||||||| |||| |||||||||||||||||    
T  19517934 aaaattttgtcttttgaccaacttaatcactgccatgtcactaatttgatgacgtggc 19517877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 20814131 - 20814291
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||||||||||||||||||| ||||||  | |||||||||||| | |||  ||||||||||||||||||||||||   ||||| || ||||    
T  20814131 ttttaggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattggtctt-gtattcgctaatccttgcaaactagtattgcaatcattaa 20814229  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    || ||||||||||| |||||| ||| | | ||| |||||||||||| ||||| ||| |||||    
T  20814230 tcatttaaaatttcgtcctttaaccaacttaatcactgccacgtcactaattcgatcacgtg 20814291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 35512540 - 35512424
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||||||||||||||| || |||||||||||| | || | |||||||| ||||||||||||||| ||||||| || |||||| ||||    
T  35512540 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatccttgcaaactagccttgcaatcattaatcattta 35512441  T
Q  138 aaatttcatcctttgac 154  Q
    ||||||| || ||||||    
T  35512440 aaatttcgtcatttgac 35512424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 194
Target Start/End: Original strand, 39453302 - 39453458
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||||||||||||||| || |||||||||||| | |||| ||| ||||||||||| ||||  || ||||||||| ||||||| ||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 39453401  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||| ||| |   |||| | ||| |||| || |||| |||||||||||||||||    
T  39453402 aaatttcgtccctctccccacttaatcactggcatgtcactaatttgatgacgtggc 39453458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 192
Target Start/End: Original strand, 5993886 - 5994045
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| | || | ||| |||||||| || ||||  || ||||||||| |||||||    
T  5993886 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatc 5993985  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
     ||||||||||| ||| |   |||| | ||| ||||||| |||| |||||||||||||||    
T  5993986 atttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtg 5994045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 192
Target Start/End: Complemental strand, 5994304 - 5994161
Alignment:
Q  49 atttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcc 148  Q
    |||||||||||||||||| || |||||||||||| | |    ||||||||||||||||||||||||  |||||| || |||||| ||||||||||| |||    
T  5994304 atttcatccttgcaattaagggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcc 5994205  T
Q  149 tttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||| | | ||| ||||||| |||| |||||||||||||||    
T  5994204 tttgaccaacttaatcactgccatgtcactaatttgatgacgtg 5994161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 188
Target Start/End: Complemental strand, 38442494 - 38442343
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||||||||||||| || |||||||||||| | |    ||||||| |||||||||||||||| ||||||| || |||| | |||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatgggttcttgtattcgttaatccttgcaaactagccttgcaatcattaaccattt 38442395  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatga 188  Q
    |||||||| |||||||||| | | ||| |||| ||| ||| |||||||||||    
T  38442394 aaaatttcgtcctttgaccaacttaatcactgtcacatcactaatttgatga 38442343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 13963259 - 13963121
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||| ||||||||||||| |||||||| |||||||||||| | |||  ||||||| ||||||||||||||||  |||||| || ||||||     
T  13963259 taggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatca 13963160  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    ||||||||||| | |||||||| | | ||| ||||||||    
T  13963159 tttaaaatttcgttctttgaccaacttaatcactgccac 13963121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 35512143 - 35512301
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||| |||||||||||||||||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || ||||||||| |||||    
T  35512143 ttttaggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaa 35512242  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgac 189  Q
    || ||||||||||| ||| |   |||| | ||| |||||||| ||| ||||||||||||    
T  35512243 tcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgac 35512301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 19892734 - 19892578
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    |||||||||||||||||||||||||||||  | |||||||||||| | |||| ||| ||| |||||||  |||  || ||||||||| ||||||| ||||    
T  19892734 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcattta 19892635  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||| || ||   |||| | ||| |||||||||||| |||||||||||||||||    
T  19892634 aaatttcgtcattctccccacttaatcactgccacgtcactaatttgatgacgtggc 19892578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 32242238 - 32242398
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||||| |||| | ||| | ||||||| | ||||  ||  |||||||| ||||||    
T  32242238 tttagggttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaat 32242337  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    | ||||||||||| ||| |   |||| | ||| |||||||||||| |||||||||||||||    
T  32242338 catttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 32242398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 18247505 - 18247355
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||| | | |||| ||||||||||||||||||||||||  |||||| || ||||||      
T  18247505 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggtctctgtattcgctaatccttgcaaactagtcttgcaatcattaatc-- 18247408  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
         ||||| |||||||| | | | ||| ||||||||||||||||||  ||||||||    
T  18247407 -----atttcttcctttgatcaacttaatcactgccacgtcattaattcaatgacgtg 18247355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 35920229 - 35920386
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||| ||| ||  ||||| ||||||||||||||| | ||   ||||||||||||||||||||| || ||||||| || |||||| |||    
T  35920229 gcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcattaatcattt 35920328  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||| |||||||||| | | ||| | |  ||||||| ||||| |||||||||||    
T  35920329 aaaatttcgtcctttgaccaacttaatcaatatcacgtcactaattcgatgacgtggc 35920386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 10684362 - 10684208
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||| |||||||||  | |||||||||||| ||| ||||||||| |||||||||||||||||  |||||| || |||||| |||||    
T  10684362 ttaaatatgtatttcatctttgcaattaaaggtcgtttaaaaattgat-tccgtattcactaatccttgcaaactagtcttgcaatcattaatcatttaa 10684264  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | |||| || ||||||| | | ||| ||||  || ||| ||||||||| |||||||    
T  10684263 agtttcgtcatttgaccaacttaatcactgtaacatcactaatttgataacgtggc 10684208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 27937053 - 27937172
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |  ||||||  | | ||||  ||||||||||||||||||||||| ||||||| || ||||||     
T  27937053 taggcttaaatatgtatttcatccttgcaattaggggtgatttaaa--ttggtctctatattcgctaatccttgcaaactagccttgcaatcattaatca 27937150  T
Q  134 tttaaaatttcatcctttgacc 155  Q
    ||||||||||| || |||||||    
T  27937151 tttaaaatttcgtcatttgacc 27937172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 20814565 - 20814456
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  ||  |||||||| |||||||     
T  20814565 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatca 20814466  T
Q  134 tttaaaattt 143  Q
    ||||||||||    
T  20814465 tttaaaattt 20814456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 37991196 - 37991313
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    ||||||||||||||| | ||||||| |||||||| || |||||||||||| | || | ||||||| |||||||||||||||| ||||||| || ||||||    
T  37991196 ttaggcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccttgcaatcattaatc 37991295  T
Q  133 gtttaaaatttcatcctt 150  Q
     ||| ||||||| |||||    
T  37991296 atttcaaatttcgtcctt 37991313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 13962860 - 13963022
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||| ||||| ||||||||||||| || |||||||||||| | || | ||| | ||||||||| | ||  || ||||||||| ||||||    
T  13962860 tttaggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaat 13962959  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | ||||||||||| ||| |   | || | ||| |||| ||||||| |||||||||||||||||    
T  13962960 catttaaaatttcgtccctctcctcacttaatcactgtcacgtcactaatttgatgacgtggc 13963022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 11761748 - 11761857
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || || |||||| ||||||| |    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcat 11761847  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  11761848 ttaaaatttc 11761857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 13362290 - 13362383
Alignment:
Q  99 taatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||||||||||| ||||||| || |||||| ||||||||||| |||| ||||| | | ||| |||||||||||| |||||||||||||||    
T  13362290 taatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctctgaccaacttaatcactgccacgtcactaatttgatgacgtg 13362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 21257586 - 21257485
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    ||||||||||||||||||| |||||||| || |||||||||||| |  | | |||||||||||||||||||||||| ||||||  || |||||| |||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggacactgtattcgctaatccttgcaaactagccttgcgatcattaatcatttaa 21257487  T
Q  139 aa 140  Q
    ||    
T  21257486 aa 21257485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 5835851 - 5835748
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| |  | |||||||||| | | || ||||||||||||||||||||| || |||||||   ||||||| |||||    
T  5835851 ttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaacatttaatcatttaa 5835752  T
Q  139 aatt 142  Q
    ||||    
T  5835751 aatt 5835748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 20840867 - 20840760
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||| | |  | ||| ||||||||||| ||||||||  |||||| || ||||||     
T  20840867 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtaactgtaatcgctaatcctagcaaactagtcttgcaatcattaatca 20840768  T
Q  134 tttaaaat 141  Q
    ||||||||    
T  20840767 tttaaaat 20840760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 21265198 - 21265301
Alignment:
Q  91 gtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacg 190  Q
    ||||| |||||||||||||||||| ||||||| || |||||  ||||||||||| |||||||||| | | ||| |||||||||||| ||||| ||| |||    
T  21265198 gtatttgctaatccttgcaaactagccttgcaatcattaattatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgataacg 21265297  T
Q  191 tggc 194  Q
    ||||    
T  21265298 tggc 21265301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 20840531 - 20840689
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| | |  | ||| ||| ||||||| ||||  || ||||||||| ||||||      
T  20840531 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatga 20840630  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||||  ||| |   |||| | ||| |||||||||||| ||||| ||| |||||    
T  20840631 tttaaaattttgtccctctccccacttaatcactgccacgtcactaattcgatcacgtg 20840689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 17202398 - 17202555
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||| |||||||||||| |||||| || |||||||||||| | || | ||| |||||||||||  |||  || ||||||||| ||||| | |    
T  17202398 aggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcat 17202497  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||||| |||     |||| | ||| ||||||| |||| |||||||||||||||    
T  17202498 ttaaaatttcgtccccctccccacttaatcactgccatgtcactaatttgatgacgtg 17202555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 24547174 - 24547263
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgca 122  Q
    ||||||||||||||||| || ||||||||||||| || ||||| |||||| | || | ||| |||||||||||||||||||| |||||||    
T  24547174 ttaggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatccttgcaaactagccttgca 24547263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 24547554 - 24547445
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | ||    || ||||||||||| ||||  || ||||||||| ||||||| |    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatcat 24547455  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  24547454 ttaaaatttc 24547445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 27587143 - 27587256
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| ||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || || |||||  |||||    
T  27587143 tttttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaa 27587242  T
Q  131 tcgtttaaaatttc 144  Q
    || |||||||||||    
T  27587243 tcatttaaaatttc 27587256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 16157284 - 16157176
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | || |  || ||| |||||||  |||  || ||||||||| ||||||| |    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcat 16157185  T
Q  135 ttaaaattt 143  Q
    |||||||||    
T  16157184 ttaaaattt 16157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 18670575 - 18670503
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaa 111  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||| | |||| |||||||| ||||||||||||    
T  18670575 ttaaatatgtatttcttccttgtaattatgaatcgtttaaaaattggtctctgtattcgccaatccttgcaaa 18670503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 5024443 - 5024292
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| || |||||||||||| | ||   ||| |||||||||||  |||  || | ||||||| ||||||| |||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaa 5024344  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacg 190  Q
    |||||| | | |   |||| | ||| |||||||| ||| |||||||||||||    
T  5024343 aatttcgttcctctccccacttaatcactgccacatcactaatttgatgacg 5024292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 18670201 - 18670307
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||||||||||||||||||| || || |||||||||||| | || | ||| |||||||||   ||||  || ||||||||| ||||||| |    
T  18670201 aggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatc---gcaatttacccttgcattgtttaatcat 18670297  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  18670298 ttaaaatttc 18670307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 18247087 - 18247242
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||||||||||||| || |||||||||||| | ||   ||| ||||||||  | ||||  || ||||||||| ||||||| |||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat--tggcaatttacccttgcattatttaatcattt 18247184  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | |||||| ||| |   |||| | ||| || |||| |||| |||||||||||||||||    
T  18247185 agaatttcgtccctctccccacttaatcaccgccatgtcactaatttgatgacgtggc 18247242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 38475429 - 38475319
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||| |||||||||||||||||| || |||||||||||| | ||   ||| ||| |||||||  |||  || ||||||||| |||||||     
T  38475429 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatca 38475330  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  38475329 tttaaaatttc 38475319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 3529270 - 3529162
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||| ||||||| ||||  || || | |||| ||||||| ||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatt 3529171  T
Q  136 taaaatttc 144  Q
    |||||||||    
T  3529170 taaaatttc 3529162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 13362653 - 13362549
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||| ||||||||| || |||||||||||| | ||   ||| ||||||||| | ||||  || ||||||||| ||||||| |||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaa 13362554  T
Q  139 aattt 143  Q
    |||||    
T  13362553 aattt 13362549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 27937424 - 27937376
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatc 87  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattgatc 27937376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 35920612 - 35920504
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||| | ||||||| || |||||||||||| | || | ||| |||||||||||  |||  || |||| |||| ||||||| ||    
T  35920612 ggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcatt 35920513  T
Q  136 taaaatttc 144  Q
    |||||||||    
T  35920512 taaaatttc 35920504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 6150453 - 6150500
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||    
T  6150453 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaat 6150500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 16082979 - 16083085
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    |||||||||||||||||||||| |||||| || | ||||||||||   || | ||| ||| ||||||| ||||  || ||||||||| ||||||| ||||    
T  16082979 cttaaatatgtatttcatccttccaattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcattta 16083078  T
Q  138 aaatttc 144  Q
    |||||||    
T  16083079 aaatttc 16083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 1506273 - 1506206
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  1506273 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 1506206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 21265571 - 21265524
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaat 21265524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 31482493 - 31482560
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  31482493 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 31482560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 20153264 - 20153203
Alignment:
Q  116 ccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||||||| |||||||||||||||||||||| | | ||| ||||| |||||||    
T  20153264 ccttgcattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgctacgtcat 20153203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 14194852 - 14194693
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||| |||| ||||||||||| ||||| || |||||||||||| |  |   ||| |  |||||||| ||||  || ||||||||| |||||||     
T  14194852 taggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattggccat-gtaattactaatcctggcaatttacccttgcattgtttaatca 14194754  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| ||| |   |||| | ||| ||||| | |||| |||||||||||||||||    
T  14194753 tttaaaatttcgtccctctccccacttaatcactgctatgtcactaatttgatgacgtggc 14194693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 24141451 - 24141583
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||| ||||||| |||| ||| ||||||||    || ||||||||| | || | ||| ||| ||||||| ||||| || |||||||   ||||||| |    
T  24141451 aggctttaatatgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcat 24141550  T
Q  135 ttaaaatttcatcctttgacccagtcaatgact 167  Q
    |||||||||||||| |||||||| | |||||||    
T  24141551 ttaaaatttcatcccttgacccatttaatgact 24141583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 28269809 - 28269762
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||    
T  28269809 taggcttaaatatgtatttcat-cttgcaattaggggtcgtttaaaaat 28269762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 28771266 - 28771158
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||| ||||| || |||||||||||| | ||   ||| ||||||||| | ||||  || || || ||| ||||||| ||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcatt 28771167  T
Q  136 taaaatttc 144  Q
    |||||||||    
T  28771166 taaaatttc 28771158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 42265926 - 42265890
Alignment:
Q  30 gttttaggcttaaatatgtatttcatccttgcaatta 66  Q
    |||| ||||||||||||||||||||||||||||||||    
T  42265926 gtttaaggcttaaatatgtatttcatccttgcaatta 42265890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 186419 - 186577
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||| ||||||||| ||| ||||| || ||||||||||||   ||   ||| ||| |||| || | ||  |||||||||||| ||||||| |    
T  186419 aggcttaaatatttatttcatc-ttgaaattaggggtcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgcattgtttaatcat 186517  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| ||| |   |||| | ||| ||| ||| |||| |||||||||||||||||    
T  186518 ttaaaatttcgtccctccccccacttaatcactaccatgtcactaatttgatgacgtggc 186577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 297105 - 297172
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||| ||| |||||||||||||||||    
T  297105 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacatcactaatttgatgacgtggc 297172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 6757956 - 6758023
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  6757956 ttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggc 6758023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 20152781 - 20152900
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||  |||| |||| ||| |||||||| |  || |||||||||   |||| ||| ||||||||||| | ||  || ||||||||| ||||||| ||    
T  20152781 ggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatcatt 20152880  T
Q  136 taaaatttcatcctttgacc 155  Q
    ||||||||| ||||||||||    
T  20152881 taaaatttcgtcctttgacc 20152900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 194
Target Start/End: Original strand, 38442075 - 38442226
Alignment:
Q  43 atatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatt 142  Q
    |||||||||||||| ||||||||| || |  ||||||||| | ||   ||| |||||||||||  |||  ||  |||||||| ||||||| |||||||||    
T  38442075 atatgtatttcatcgttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatt 38442174  T
Q  143 tcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||| |   |||| | ||| |||||||| | | |||||||||||||||||    
T  38442175 tcgtccctctccccacttaatcactgccacataactaatttgatgacgtggc 38442226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 5255077 - 5255162
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaat 181  Q
    ||||||||||| ||||| ||||||||||||  |||||| ||||||||||| || ||||||| | | ||| |||| ||||||| ||||    
T  5255077 tcgctaatcct-gcaaattaaccttgcatttattaatcatttaaaatttcgtcatttgaccaacttaatcactgtcacgtcactaat 5255162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 8875449 - 8875590
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| ||| ||||||| ||||  ||  |||||||| ||||||| ||    
T  8875449 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatt 8875548  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| | |||||||| | | ||| |||||||||||||    
T  8875549 taaaatttcgttctttgaccaacttaatcactgccacgtcat 8875590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 24547257 - 24547326
Alignment:
Q  103 ccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    |||||||||||| ||||||| || |||||| ||||||||||| || ||||||| | | ||| ||||||||    
T  24547257 ccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcatttgaccaatttaatcactgccac 24547326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 41930852 - 41930755
Alignment:
Q  97 gctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||||||  || ||||||| |  |||||| ||||||||||  ||||| |||| | | ||| ||| |||||||| ||||||||||| |||||    
T  41930852 gctaatccttgcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactaccacgtcactaatttgatgaggtggc 41930755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 13362248 - 13362280
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaatta 66  Q
    |||| ||||||||||||||||||||||||||||    
T  13362248 taggtttaaatatgtatttcatccttgcaatta 13362280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 33871398 - 33871458
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    |||||||| || ||||  || ||||||||| ||||||| ||||||||||| ||||||||||    
T  33871398 tcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacc 33871458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 42067954 - 42067838
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||| ||||||| |||||||| |||||||| || || ||||||| | | || | ||| | | ||||||| |||||||  || ||||  ||||||||     
T  42067954 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgataatcctggcaaactgcccctgcaaactttaatca 42067855  T
Q  134 tttaaaatttcatcctt 150  Q
    ||||||||||| |||||    
T  42067854 tttaaaatttcgtcctt 42067838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 25231278 - 25231071
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| |||| |||||||| || |||||||||||| | ||   ||||||||||||||| ||||| || |||||||  ||||||||     
T  25231278 taggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatca 25231179  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggctctggtaattggtcaacccacacgttaaatgacaatttt 233  Q
    ||||||||||| ||| ||| |||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| ||||| || ||||    
T  25231178 tttaaaatttcgtcccttgtcccagttaatgactgccacgtcattaatatgatgacgtggcgctgttaattggtcaacccacacgtgaaatggcagtttt 25231079  T
Q  234 acccctat 241  Q
    ||||||||    
T  25231078 acccctat 25231071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 37895346 - 37895505
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| |    
T  37895346 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 37895445  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||||||||||||| | | ||| |||||||||||| ||||||||| |||||||    
T  37895446 ttaaaatttcatcctttgaccaacttaatcactgccacgtcactaatttgataacgtggc 37895505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 39498712 - 39498549
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||   |||||||||||||||||||||||| ||||||| || ||||    
T  39498712 ttttaggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaa 39498613  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || |||||||||| ||||||||||| | | ||| |||||||||||| |||| ||||||||||||    
T  39498612 tcatttaaaatttaatcctttgaccaacttaatcactgccacgtcactaatatgatgacgtggc 39498549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 15848519 - 15848358
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||| | | |  |||||||||||||||||| ||||||||||||| || ||||||    
T  15848519 ttaggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatcattaatc 15848420  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
     ||||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  15848419 atttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 15848358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 10713151 - 10712993
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| | | || ||||||||||||||||||||| || ||||||| || |||||| ||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcatt 10713052  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| || |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  10713051 taaaatgtcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 10712993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 39423945 - 39423785
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| |||| |  |||||||||||||||||||||||  |||||| || ||||||     
T  39423945 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagtcttgcaatcattaatca 39423846  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||  |||||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  39423845 tttaaaattttgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 39423785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 16099453 - 16099294
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | |||||| ||||||||||||||||| ||||||| || |||||| |    
T  16099453 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcat 16099354  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  16099353 ttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 16099294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 6588686 - 6588824
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| || |||||||||||| | ||   |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaa 6588785  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||| ||||||||||||||  || ||||||| |||||    
T  6588786 aatttcgtcctttgacccagttgatcactgccaggtcat 6588824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 36480144 - 36479988
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||||||||||||||| || |||||||||||| | || |  ||||||||||||||||||||||| ||||||| || |||||  ||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatcattaataattta 36480045  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||| |||||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  36480044 aaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 36479988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 6658280 - 6658117
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| ||||||||||||||||| |||||||||||||  | |||||||||||| | || | |||||||||||||||||||||||| |||| || || ||||    
T  6658280 tttttggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattaa 6658181  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  6658180 tcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 6658117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 3555249 - 3555385
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | |||| ||||||| || ||||| |||| || ||||||||||||||||| |    
T  3555249 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatcat 3555348  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgcca 171  Q
    |||||||||| |||||| ||||||| ||| |||||||    
T  3555349 ttaaaatttcgtcctttaacccagttaatcactgcca 3555385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 34448225 - 34448065
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||| |||||||||||||||||||||| || | |||||||||| | || |  |||||| ||||||||||||||||  |||||| || ||||||     
T  34448225 taggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggtccctatattcgttaatccttgcaaactagtcttgcaatcattaatca 34448126  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  34448125 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 34448065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 178
Target Start/End: Complemental strand, 3556437 - 3556295
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||| | |||| ||| ||| |||||||||||||||| ||||||||||||||||| ||    
T  3556437 ggcttaaatatacatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgcattctttaatcatt 3556338  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcatt 178  Q
    ||||||||| |||||| || |||  ||| | ||||||||||||    
T  3556337 taaaatttcctcctttaactcagctaatcaatgccacgtcatt 3556295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 11163054 - 11163212
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||| |||||||||  | |||||||||||| | || | ||||||||||||||||||||||||  |||||| || |||||| ||    
T  11163054 ggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 11163153  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  11163154 taaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 11163212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 36 - 169
Target Start/End: Original strand, 30729621 - 30729754
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||||||||||||||    |||||||||||| | || |  |||||||||||||||||||| |  ||||||||||||||||||||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcgtt 30729720  T
Q  136 taaaatttcatcctttgacccagtcaatgactgc 169  Q
    ||||||||| |||||||||||||| ||| |||||    
T  30729721 taaaatttcgtcctttgacccagttaatcactgc 30729754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 9076495 - 9076339
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| || |||||||||| || |||||||||||| | |||||||||||| ||||||||||||||||  |||||| || |||||| ||    
T  9076495 ggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattggtctccgtattcgttaatccttgcaaactagtcttgcaatcattaatcatt 9076396  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||| || ||| ||| | | ||| |||||||| ||| ||||| |||||||||    
T  9076395 taaaatttcgtcatttaaccaacttaatcactgccacatcactaattcgatgacgtg 9076339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 47 - 183
Target Start/End: Complemental strand, 13692637 - 13692501
Alignment:
Q  47 gtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcat 146  Q
    |||||||||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| ||||||||||| |    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgt 13692538  T
Q  147 cctttgacccagtcaatgactgccacgtcattaattt 183  Q
    ||||||||| | | ||| |||| ||||||| ||||||    
T  13692537 cctttgaccaacttaatcactgtcacgtcactaattt 13692501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 36755517 - 36755397
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | || |  || |||||||||||||||||||| ||||||| || |||||| |    
T  36755517 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatcat 36755418  T
Q  135 ttaaaatttcatcctttgacc 155  Q
    |||||||||| ||||||||||    
T  36755417 ttaaaatttcgtcctttgacc 36755397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 36382158 - 36382319
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    |||||||||| ||||||||||||||||||||||| || |||||||||||| | || |  || |||||||||||  |||  || ||||||||| |||||||    
T  36382158 ttaggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatc 36382257  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
     ||||||||||||||| |   |||| | ||| |||||||||||| |||||||||||||||||    
T  36382258 atttaaaatttcatccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 36382319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 152
Target Start/End: Complemental strand, 36382556 - 36382439
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | || | |||||||||||||| |||||||||  |||||| || |||||| |    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccatgcaaactagtcttgcaatcgttaatcat 36382457  T
Q  135 ttaaaatttcatcctttg 152  Q
    |||||||||| |||||||    
T  36382456 ttaaaatttcgtcctttg 36382439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 176
Target Start/End: Complemental strand, 44045435 - 44045290
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||| |||| |||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || ||||    
T  44045435 ttttaggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaa 44045336  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtca 176  Q
    || ||||||||||  ||| |   |||||| ||| ||||||||||||    
T  44045335 tcatttaaaattttgtccctcatcccagttaatcactgccacgtca 44045290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 44713799 - 44713931
Alignment:
Q  40 taaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaa 139  Q
    ||||||||||||||||||||| ||||| || |||||||||||| | ||   |||||||||||||||||||||||| ||||||| || |||||| ||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaa 44713898  T
Q  140 atttcatcctttgacccagtcaatgactgccac 172  Q
    ||||| |||||||||| | | ||| ||||||||    
T  44713899 atttcgtcctttgaccaacttaatcactgccac 44713931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 45556476 - 45556356
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||| ||||| || |||||||||||| | || | ||||||||||||| |||||||||| ||||||| || |||||| |    
T  45556476 aggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtcgctgtattcgctaatctttgcaaactagccttgcaatcattaatcat 45556377  T
Q  135 ttaaaatttcatcctttgacc 155  Q
    ||||||||| |||||||||||    
T  45556376 ttaaaatttaatcctttgacc 45556356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 192
Target Start/End: Complemental strand, 37895772 - 37895619
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    ||||||||||||||||||||||||||||||| |||||||||||  | |  ||||| ||||||||||| ||||  ||  |||||||| ||||||| |||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggttcccgtaatcgctaatcctggcaatttacacttgcattgtttaatcatttaa 37895673  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||| ||| |   |||| | ||| |||||||||||| |||||||||||||||    
T  37895672 aatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 37895619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 15848087 - 15848246
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||| |||||||||||||||||||||||| || |||||||||||| | || | ||| ||||||||||| | ||  || ||||||||| ||||||| |    
T  15848087 aggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcat 15848186  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| ||| |   |||| | ||| |||||||||||| ||||||||||| |||||    
T  15848187 ttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgatgtggc 15848246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 39423515 - 39423673
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||| |||||||||||||| ||||| || |||||||||||| | |||| ||| |||||||| || ||||  || ||||| ||| ||||||| ||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcatt 39423614  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||| |   |||| | ||| ||||||| |||| |||||||||||||||||    
T  39423615 taaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtggc 39423673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 25230102 - 25230243
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| |||| |||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| |   ||||| ||    
T  25230102 ggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaattactaatcatt 25230201  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||| |   |||||| ||| |||||||| ||||    
T  25230202 taaaatttcgtccctgagcccagttaattactgccacatcat 25230243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 44714193 - 44714033
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||||||   || | ||| | ||||||||| ||||  || ||||||||| |||||    
T  44714193 ttttaggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaa 44714095  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    || ||||||||||| ||| |   |||| | ||| ||||||| |||| |||||||||||||||    
T  44714094 tcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtg 44714033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 21370630 - 21370522
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||| ||||   ||||||| |||||||||||||||| | ||||| || |||||  ||    
T  21370630 ggcttaaatatgtatttcatccttgtaattataggtcgtttaaaaattgatccatgtattcgttaatccttgcaaactagcattgcaatcattaataatt 21370531  T
Q  136 taaaatttc 144  Q
    |||||||||    
T  21370530 taaaatttc 21370522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 45556111 - 45556219
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| | || | ||| ||||||||||| ||||  || || |||||| ||||||| |    
T  45556111 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatcat 45556210  T
Q  135 ttaaaattt 143  Q
    |||||||||    
T  45556211 ttaaaattt 45556219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 2318160 - 2318314
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||||||||||||| || | |||||||||| | |||  ||| |||||||| || ||||  || ||||||||| ||||||| |||    
T  2318160 gcttaaatatgtatttcatccttgcaatta-gggtagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 2318258  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||| ||| |   |||| | ||| | |||||||||| |||||||||||||||    
T  2318259 aaaatttcgtccctctccccacttaattaatgccacgtcactaatttgatgacgtg 2318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 10712719 - 10712881
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||| ||||| ||||||||||||||||||||||| || |||||||||||| | ||    || ||  ||||||| ||||  || ||||||||| ||||||    
T  10712719 tttagacttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaat 10712818  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | ||||||||||||||| |   |||| | ||| ||| |||||||| |||||||||||||||||    
T  10712819 catttaaaatttcatccctctccccacttaatcactaccacgtcactaatttgatgacgtggc 10712881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 44044113 - 44044222
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| |||| |||||||| || | |||||||||| | || | |||||| |||||||||| |||||||||||| | || |||||| |    
T  44044113 aggcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtccctgtattcactaatccttgaaaactaaccttgtaatcattaatcat 44044212  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  44044213 ttaaaatttc 44044222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 11163453 - 11163343
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || |  |||||| |||||||     
T  11163453 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatca 11163354  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  11163353 tttaaaatttc 11163343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 22051421 - 22051313
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||| ||||||||||  | | ||||||||||   |||| ||| ||||||||||| ||||  || ||||||||| ||||||| ||    
T  22051421 ggcttaaatatgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatt 22051322  T
Q  136 taaaatttc 144  Q
    |||||||||    
T  22051321 taaaatttc 22051313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 6307145 - 6306992
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||| |||||||||  | |||||||||||| | || |  || ||| |||||||| |||| ||  | |||||| ||||||| ||    
T  6307145 ggcttaaatatgtatttcatc-ttgcaattagtggtcgtttaaaaattggtccctataatcgttaatccttacaaattagtcctgcattatttaatcatt 6307047  T
Q  136 taaaatttca--tcctttgacccagtcaatgactgccacgtcattaatttgatga 188  Q
    |||||||||   |||||||||  ||| || |||||||||||||||||||| ||||    
T  6307046 taaaatttctcgtcctttgacttagttaaggactgccacgtcattaatttaatga 6306992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 192
Target Start/End: Original strand, 36479719 - 36479874
Alignment:
Q  38 cttaaatatgtatttcatcc-ttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||| ||||||||| || |||||||||||| | ||   ||| ||||||||| | |||   || ||||||||| ||||||| |||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcattt 36479818  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||| ||| |   |||| | ||| ||||||| |||| |||||||||||||||    
T  36479819 aaaatttcgtccatctccccacttaatcactgccatgtcactaatttgatgacgtg 36479874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 2318939 - 2318836
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||| | |    |||||||||| || ||||||||||  |||||| || |||||| |    
T  2318939 aggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggttcatgtattcgctattcgttgcaaactagtcttgcaatcattaatcat 2318840  T
Q  135 ttaa 138  Q
    ||||    
T  2318839 ttaa 2318836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 13995764 - 13995831
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  13995764 ttaatcgtttaaaatttggtcctttgaccaaattaatcactgccacgtcactaatttgatgacgtggc 13995831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 6657876 - 6657986
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||  || |||||||||||| | || | ||| || |||||| | ||||  || || |||||| |||||||     
T  6657876 taggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatca 6657975  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  6657976 tttaaaatttc 6657986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 16099055 - 16099163
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| || |||||||||| || || ||||||||| | || | ||| || |||||||| ||||  || || |||||| ||||||| ||    
T  16099055 ggcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcatt 16099154  T
Q  136 taaaatttc 144  Q
    |||||||||    
T  16099155 taaaatttc 16099163  T

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Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 1695831 - 1695898
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||||||||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  1695831 ttaatcatttaaaatttggtcctttgaccaaattaatcactgccacgtcactaatttgatgacgtggc 1695898  T

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Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 33062141 - 33062208
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  33062141 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 33062208  T

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Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 41248650 - 41248717
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  |||||||||| | | ||| |||||||| ||| |||||||||||||||||    
T  41248650 ttaatcgtttaaaatttggtcctttgaccaaattaatcactgccacatcactaatttgatgacgtggc 41248717  T

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Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 15604338 - 15604456
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| ||||||||||| ||||  || ||||||||| ||||||| |    
T  15604338 aggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 15604437  T
Q  135 ttaaaatttcatcctttga 153  Q
    |||||||||| ||||||||    
T  15604438 ttaaaatttcgtcctttga 15604456  T

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Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 15604706 - 15604624
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| |||||||||| | | ||| |||||| ||||||    
T  15604706 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccccgtcat 15604624  T

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Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 41587234 - 41587375
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||  |||| |||| |||||||||||| |  || ||||||||| | || | ||| ||| ||||||| | ||| || ||||||||| ||||||| |    
T  41587234 aggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattggtc-ctgtaatcgttaatcctggaaaattacccttgcattgtttaatcat 41587332  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||||||||| ||| | | ||| |||| ||||||||    
T  41587333 ttaaaatttcatcctttaaccaacttaatcactgtcacgtcat 41587375  T

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Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 2318487 - 2318430
Alignment:
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||||||| ||||||| | | ||| |||||||| |||||||||||||||||||    
T  2318487 ttaaaatttcatcttttgaccaacttaatcactgccacatcattaatttgatgacgtg 2318430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 28226170 - 28226051
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| ||||||||||| ||||  || ||||||||| ||||||| ||    
T  28226170 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 28226071  T
Q  136 taaaatttcatcctttgacc 155  Q
    ||||||||| | ||||||||    
T  28226070 taaaatttcgtactttgacc 28226051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 34447812 - 34447859
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||||||||||||||||||||||||| ||||| || || |||||||||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaat 34447859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 8710835 - 8710753
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||||  |||  || ||||||||| ||||||| ||||||||||| |||||||||| | |  || |||||||||||||    
T  8710835 tcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactttatcactgccacgtcat 8710753  T

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Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 11830444 - 11830505
Alignment:
Q  116 ccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||||||| ||||||||||| || ||||||  | ||||| |||||||||||||    
T  11830444 ccttgcattgtttaatcatttaaaatttcgtcatttgacaaactcaatcactgccacgtcat 11830505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 144
Target Start/End: Original strand, 39498317 - 39498418
Alignment:
Q  43 atatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatt 142  Q
    |||||||||| ||||||| ||||| || |||||||||||| | || | ||| ||| ||||||| ||||  || || | |||| ||||||| |||||||||    
T  39498317 atatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatt 39498416  T
Q  143 tc 144  Q
    ||    
T  39498417 tc 39498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 8342250 - 8342306
Alignment:
Q  99 taatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||| ||||  || ||||||||| ||||||| ||||||||||| ||||||||||    
T  8342250 taatcctggcaatttatccttgcattgtttaatcatttaaaatttcgtcctttgacc 8342306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 22051092 - 22051152
Alignment:
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| |||||||||| | | ||| |||||||||||| ||||| ||||| |||||    
T  22051092 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgatgtggc 22051152  T

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Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 41588399 - 41588343
Alignment:
Q  121 cattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||| ||||||| |||||||||||||||||||||| | | ||| ||||||| |||||    
T  41588399 cattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgccaagtcat 41588343  T

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Target: chr1 (Bit Score: 99; Significance: 7e-49; HSPs: 95)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 30711762 - 30711600
Alignment:
Q  29 agttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattcttt 128  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||| |||||||||||||||||||||||| ||||||| || ||    
T  30711762 agttttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcatt 30711663  T
Q  129 aatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgt 191  Q
    |||| ||||||||||| || ||||||| | | ||| |||||||||||| ||||||||||||||    
T  30711662 aatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaatttgatgacgt 30711600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 6367991 - 6367832
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| |    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 6367892  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  6367891 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 6367832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 32917688 - 32917530
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||| |||||||||| || |||||||||||| | |||| ||||||| |||||||||||||||| ||||||| || |||||| ||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagccttgcaatcattaatcatt 32917589  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||||| | | ||| | |||||||||| |||||||||||||||||    
T  32917588 taaaatttcatcctttgaccaacttaatcattgccacgtcactaatttgatgacgtggc 32917530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 43759254 - 43759092
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| || | |||||||||||||||||||||||| ||||||| |||| |||    
T  43759254 tttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagccttgcaatcttcaat 43759155  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | ||||||||||| |||||||||| | | ||  |||| ||| ||| |||||||||||||||||    
T  43759154 catttaaaatttcgtcctttgaccaacttaaccactgtcacatcactaatttgatgacgtggc 43759092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 183221 - 183379
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| |||||| |||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| ||    
T  183221 ggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 183320  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  183321 taaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 183379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 47999123 - 47999281
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| ||    
T  47999123 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 47999222  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||  |||||||||| | | ||| | ||||||||||  ||||||||||||||||    
T  47999223 taaaatttagtcctttgaccaacttaattattgccacgtcaccaatttgatgacgtggc 47999281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 26024820 - 26024664
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||||||||||||  |||||| || |||||| ||    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatt 26024721  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||    
T  26024720 taaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgacgtg 26024664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 19017628 - 19017787
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || | |||||||||| ||| || |||||||||||||||| |||||||  |||||| || |||||| |    
T  19017628 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatttctgtattcgctaatccttacaaactagtcttgcaatcattaatcat 19017727  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| | | |||||| | | ||| |||||||||||| |||||||||||||||||    
T  19017728 ttaaaatttcgttcgttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 19017787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 37578187 - 37578350
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||| |||||||||||||||||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| |||| || || ||||    
T  37578187 ttttaggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttccaatcattaa 37578286  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||| | |||||||| | | ||| ||||| | |||| |||||||||||||||||    
T  37578287 tcatttaaaatttcgttctttgaccaacttaatcactgctatgtcactaatttgatgacgtggc 37578350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 194
Target Start/End: Complemental strand, 49723147 - 49722996
Alignment:
Q  43 atatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatt 142  Q
    |||||||||||||||||||||||| || |||||||||||| | ||   |||||||||||||||||||||||| |||| || || |||||| |||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaatt 49723048  T
Q  143 tcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||||| | | ||| |||||||||||| ||||||||| |||||||    
T  49723047 tcatcctttgaccaacttaatcactgccacgtcactaatttgataacgtggc 49722996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 1103890 - 1103731
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||| |||||||||||||||||||  | |||||||||||| | || | ||||||||||||||||||||||||  |||||| || |||||| |    
T  1103890 aggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 1103791  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | | | |||||||||||| ||||||||||| |||||    
T  1103790 ttaaaatttcgtcctttgaccaacttattcactgccacgtcactaatttgatgatgtggc 1103731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 40210373 - 40210528
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    ||||||||||||||||||||||||||||  | |||||||||| | | |||  ||||||||||||||||||||||||  |||||| || |||||| |||||    
T  40210373 ttaaatatgtatttcatccttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatccttgcaaactagacttgcaatcattaatcatttaa 40210472  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| |||||||||| | | ||| ||||||||| ||||||||||||||| ||||    
T  40210473 aatttcgtcctttgaccaacttaatcactgccacgacattaatttgatgacatggc 40210528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 1841888 - 1841731
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||| |||||||||||||||||||||| ||| | || |||||||||||| | || | ||||||||||||||||||||||| | |||||| || ||||||     
T  1841888 taggtttaaatatgtatttcatccttgtaatgaggggtcgtttaaaaattgttccctgtattcgctaatccttgcaaact-agcttgcaatcattaatca 1841790  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||    
T  1841789 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtg 1841731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 194
Target Start/End: Complemental strand, 41099157 - 41099003
Alignment:
Q  40 taaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaa 139  Q
    |||||||||||||||||||| ||||||  | |||||||||||| | |||| ||||||||||||||||||||||||||||| || || |||||| ||||||    
T  41099157 taaatatgtatttcatccttacaattagtggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactaaccttacaatcattaatcatttaaa 41099058  T
Q  140 atttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||| || ||||||| | | ||| |||| || |||| |||||||||||||||||    
T  41099057 atttcgtcatttgaccaacttaatcactgtcatgtcactaatttgatgacgtggc 41099003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 4960541 - 4960698
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||| ||||||||| || |||||||||||| | |||  ||||||||||||||||||||  || ||||||||| ||||||| |||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcattt 4960640  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||| ||| |   |||| | ||| |||||||||||| |||||||||||||||||    
T  4960641 aaaatttcgtccctcttcccacttaatcactgccacgtcactaatttgatgacgtggc 4960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 13914063 - 13914224
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||||||||   ||   ||||||||||||||||||||| ||  |||||| || ||||    
T  13914063 ttttaggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatcattaa 13914162  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    || ||||||||||| |||||||||| | | ||| ||| |||||||| |||||||||||||||    
T  13914163 tcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcactaatttgatgacgtg 13914224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 36694280 - 36694437
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| | |||  ||||||||||||||||||||||||  |||||| || ||||||     
T  36694280 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatca 36694379  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgt 191  Q
    |||||||||||  ||||||||| | | ||| |||| || |||| ||||| ||||||||    
T  36694380 tttaaaatttcgccctttgaccaacttaatcactgtcaagtcactaattcgatgacgt 36694437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 36710381 - 36710538
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| | |||  ||||||||||||||||||||||||  |||||| || ||||||     
T  36710381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatca 36710480  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgt 191  Q
    |||||||||||  ||||||||| | | ||| |||| || |||| ||||| ||||||||    
T  36710481 tttaaaatttcgccctttgaccaacttaatcactgtcaagtcactaattcgatgacgt 36710538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 35 - 190
Target Start/End: Original strand, 17661851 - 17662004
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| | ||||| || |||||| |    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc-ctgtattcgctaatccttgcaaactagcattgcaatcattaatcat 17661949  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacg 190  Q
    |||||||||| |||||||||| | | ||| | |||||||||| ||||| |||||||    
T  17661950 ttaaaatttcgtcctttgaccaacttaatca-tgccacgtcactaattcgatgacg 17662004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 36 - 192
Target Start/End: Original strand, 6367562 - 6367718
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || ||||||||| ||||||| ||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 6367661  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||| ||| |   |||| | ||| |||||||||||| |||||||||||||||    
T  6367662 taaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 6367718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 24009570 - 24009694
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| ||||||||||||||||||||||||||||||| || |||||||||||| | ||   |||||| ||||||||||| ||||| ||||||| || ||||    
T  24009570 tttttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgccaactagccttgcaatcattaa 24009669  T
Q  131 tcgtttaaaatttcatcctttgacc 155  Q
    || ||||||||||||||||||||||    
T  24009670 tcatttaaaatttcatcctttgacc 24009694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 7820953 - 7821112
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || || ||||| |||   || | ||| |||||||||||| |||  || ||||||||| ||||||| |    
T  7820953 aggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttacccttgcattgtttaatcat 7821052  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| |   ||| |||||||||||| |||||||||||||||||    
T  7821053 ttaaaatttcgtcctttgaccaacgtaatcactgccacgtcactaatttgatgacgtggc 7821112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 48779548 - 48779389
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| |  ||| ||||||||   ||   ||||| ||||||||||||||||||  |||||| || |||||| |    
T  48779548 aggcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaattagtccatgtatttgctaatccttgcaaactagtcttgcaatcattaatcat 48779449  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  48779448 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 48779389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 30711327 - 30711485
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| || | |||||||||| ||||||  || ||||||||||| ||||  || ||||||||| ||||||| ||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcatt 30711426  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||| | | |||| | ||| ||||||| |||| |||||||| ||||||||    
T  30711427 taaaatttcgtccctcgccccacttaatcactgccatgtcactaatttgacgacgtggc 30711485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 7821382 - 7821224
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||| |||||||| |||||||||  | |||||||||||| | ||   |||||||||||||||||||||||| || |||| || |||||| |    
T  7821382 aggcttaaatatgcatttcatcattgcaattaaaggtcgtttaaaaattggtcat-gtattcgctaatccttgcaaactagccgtgcaatcattaatcat 7821284  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||| |||||| |||||||||| | | ||| |||| ||||||| |||||||||||||||||    
T  7821283 ttataatttcgtcctttgaccaacttaatcactgtcacgtcactaatttgatgacgtggc 7821224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 34464444 - 34464607
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| ||||||||||||||||||||||||||||||| || |||||||||||| | ||   ||| ||||||||| | ||||  || ||||||| | |||||    
T  34464444 tttttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaa 34464543  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||| || ||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  34464544 tcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 34464607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 192
Target Start/End: Complemental strand, 19323317 - 19323164
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaat-cgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| || ||   |||||||||||||||||||||||||| ||||| || |||||| ||||    
T  19323317 ttaaatatgtatttcattcttgtaattatggatcgtttaaaaattcgttcat-gtattcgctaatccttgcaaactaactttgcaatcattaatcattta 19323219  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||| ||| | |||||||| | | ||| ||| ||| |||| |||||||||||||||    
T  19323218 aaagttcgttctttgaccaacttaatcactaccatgtcactaatttgatgacgtg 19323164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 34850493 - 34850335
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||||||||||||||||||||| || |||||||   ||||||| ||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatt 34850394  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||||| |   |||| | ||| |||||||||||| | ||| | |||||||||    
T  34850393 taaaatttcatccctctccccacttaatcactgccacgtcactgattagctgacgtggc 34850335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 19322890 - 19323048
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat-cgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||||| || ||   |||||||||||||||||||||||||| ||||| || ||||||    
T  19322890 taggcttaaatatgtatttcatccttataattacgggtcgtttaaaaattcgttcat-gtattcgctaatccttgcaaactaactttgcaatcattaatc 19322988  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
     ||||||| ||| | |||||||| | | ||| ||| ||| |||| |||||||||||||||    
T  19322989 atttaaaagttcgttctttgaccaacttaatcactaccatgtcactaatttgatgacgtg 19323048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 17692610 - 17692505
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| || |||||||||||||| || | ||  ||||||||||||||||| || | ||||||| ||||||| |||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcatttaa 17692511  T
Q  139 aatttc 144  Q
    ||||||    
T  17692510 aatttc 17692505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 192
Target Start/End: Original strand, 23209365 - 23209517
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| || ||||||||||||  ||     |||||| |||||||||||||||| ||||||| || |||||| |||||    
T  23209365 ttaaatatgtatttcatccttgcaattaggg-tcgtttaaaaattaatacttatattcgttaatccttgcaaactagccttgcaatcattaatcatttaa 23209463  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||  | |||||||| | | ||| |||||||||||| ||||| |||||||||    
T  23209464 aattttgttctttgaccaacttaatcactgccacgtcactaattcgatgacgtg 23209517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 4960932 - 4960820
Alignment:
Q  41 aaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaa 140  Q
    |||||||| |||||| || |||||||  | |||||||||||| | || |||||||||||||||||||||||||| ||||||| || |||||| |||||||    
T  4960932 aaatatgtttttcatactagcaattagaggtcgtttaaaaattggtccccgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaa 4960833  T
Q  141 tttcatcctttga 153  Q
    |||| ||||||||    
T  4960832 tttcgtcctttga 4960820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 35473626 - 35473750
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||| |||||||| ||||| | || ||||    
T  35473626 ttttaggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaaactagccttgtaatcattaa 35473725  T
Q  131 tcgtttaaaatttcatcctttgacc 155  Q
     | ||||||||||  ||||||||||    
T  35473726 acatttaaaattttgtcctttgacc 35473750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 24009966 - 24009811
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| | ||   ||| |||| |||||| ||||  || ||||||||| ||||||| |||||    
T  24009966 ttaaatttgtatttcatccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgcattgtttaatcatttaa 24009867  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||| |   |||| | ||| |||||||| ||| |||||||||||||||||    
T  24009866 aatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtggc 24009811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 177
Target Start/End: Complemental strand, 5735140 - 5734998
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||| | |    |||||||||||||||||||||||| |||| || || |||||| |    
T  5735140 aggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttacaatcattaatcat 5735041  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||| ||| |   |||||| ||| |||| ||||||||    
T  5735040 ttaaaatttcgtccctgagcccagttaattactgtcacgtcat 5734998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 177
Target Start/End: Complemental strand, 46900029 - 46899887
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||||||||||||| |||||||| || || ||||||||| | ||   |||||||||||| ||||||||||| ||||||| || |||||| |    
T  46900029 aggcttaaatatgtatttcatccatgcaattaagggtcatttaaaaattggtcaatgtattcgctaattcttgcaaactagccttgcaatcattaatcat 46899930  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||| ||| |   |||||| ||| |||| ||||||||    
T  46899929 ttaaaatttcgtccctgagcccagttaattactgtcacgtcat 46899887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 41098731 - 41098840
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||||||||||| |||||||||| || |||||||||||| | |||| ||| |||||||||||  |||  || ||||||||| |||||||     
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 41098830  T
Q  134 tttaaaattt 143  Q
    ||||||||||    
T  41098831 tttaaaattt 41098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 46899061 - 46899202
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||||| |||||||| || |||||||||||| | ||   |||||||||||| ||||||||||| | ||||| || |||||| ||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcattaatcatt 46899160  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||| |   |||||| ||| |||||||| ||||    
T  46899161 taaaatttcgtccctgagcccagttaattactgccacatcat 46899202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 34849011 - 34849119
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||| || || ||||||||| | || | ||||||||||||||||||||| || |||||||   ||||||| ||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatt 34849110  T
Q  136 taaaatttc 144  Q
    |||||||||    
T  34849111 taaaatttc 34849119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 40210796 - 40210640
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||||| ||||||||| ||  ||||||||||| | |||  ||| |||||||| || ||||  || ||||||||| ||||||| ||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 40210697  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||| ||| |   |||| | ||| |||||||||||| ||| |||||||||||||    
T  40210696 aaatttcgtccctctccccacttaatcactgccacgtcactaaattgatgacgtggc 40210640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 40772507 - 40772615
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | || | ||| |||||||||||  |||  ||  |||||||| ||||||| ||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatt 40772606  T
Q  136 taaaatttc 144  Q
    |||||||||    
T  40772607 taaaatttc 40772615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 13914494 - 13914339
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    ||||||||||||||||||||||||||||||  | | |||||||||| | ||   ||| ||||||||||| ||||  || ||||| ||| ||||||| |||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcattt 13914395  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||| ||| |   |||| | ||| |||||||||||| |||||||||||||||    
T  13914394 aaaatttcgtccctctccccactaaatcactgccacgtcactaatttgatgacgtg 13914339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 17662279 - 17662120
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||  || |||||||||||| | |  |  || ||| ||||||| ||||  || ||||||||| ||||||| |    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcat 17662180  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| ||| |   |||| | ||| |||||||||||| ||||||||||| |||||    
T  17662179 ttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatttgatgaagtggc 17662120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 19018060 - 19017901
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    |||||||||||||||||||| |||||||||||||  | |||||||||||| | ||   ||||||||||||||| ||||  || ||||||||| |||||||    
T  19018060 ttaggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatc 19017961  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
     ||||||||||  ||| |   |||| | ||| |||||| | ||| |||||||||||||||    
T  19017960 atttaaaattttgtccctcttcccacttaatcactgccgcatcactaatttgatgacgtg 19017901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 37578621 - 37578462
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||  || |||||||||||| | | |  ||| ||||||||||| ||||  || |||| ||||  |||||| |    
T  37578621 aggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcat 37578522  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| ||  |   |||| | ||| |||||||||||| |||||||||||||||||    
T  37578521 ttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtggc 37578462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 40772888 - 40772813
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaa 110  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||| || | ||||||||||||||||||||    
T  40772888 aggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgtattcgctaatccttgcaa 40772813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 36694678 - 36694568
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| |  | |||||||||| | |||| ||| |||||||||||  |||  || ||||||||| |||||||     
T  36694678 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 36694579  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  36694578 tttaaaatttc 36694568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 36710779 - 36710669
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| |  | |||||||||| | |||| ||| |||||||||||  |||  || ||||||||| |||||||     
T  36710779 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 36710680  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  36710679 tttaaaatttc 36710669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 5734008 - 5734116
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||| | ||   ||| ||||||||||||||||| ||  |||||||| |||||||     
T  5734008 taggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtc-atgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 5734106  T
Q  134 tttaaaattt 143  Q
    ||||||||||    
T  5734107 tttaaaattt 5734116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 23209760 - 23209647
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| | ||   ||| ||||||||||| ||||  || ||||||||| || ||    
T  23209760 ttttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgttcaa 23209661  T
Q  131 tcgtttaaaatttc 144  Q
    || |||| ||||||    
T  23209660 tcatttacaatttc 23209647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 26024422 - 26024527
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| || |||||||||| || |||||||||||| | |||| ||| ||||||||||| ||||  || ||||||||| ||||||| |    
T  26024422 aggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 26024521  T
Q  135 ttaaaa 140  Q
    ||||||    
T  26024522 ttaaaa 26024527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 35152757 - 35152684
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaa 110  Q
    |||||||||||||||||||||||||||||| || ||||||||||||   |||| ||||||||||||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatccttgcaa 35152684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 40439615 - 40439535
Alignment:
Q  38 cttaaatatgtatttcatccttgcaatt-atggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaacct 118  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| ||||   ||||||||||||||||||||||||||||    
T  40439615 cttaaatatgtatttcatccttgcaattaatgggtcgtttaaaaattgatc-atgtattcgctaatccttgcaaactaacct 40439535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 34464881 - 34464721
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||||| | ||   ||| ||||||||| | ||||  || ||||||| | ||||||    
T  34464881 tttaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaat 34464782  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    | ||||||||||  ||| |   |||| | ||| ||||||| |||| |||||||||||||||    
T  34464781 catttaaaattttgtccctctccccacttaatcactgccatgtcactaatttgatgacgtg 34464721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 194
Target Start/End: Original strand, 42248475 - 42248631
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    |||||||||||||||||||||||||||||  | |||||||||||| | |||  ||| ||||||||| | ||||  || ||||||||| ||||||| ||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcattta 42248574  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||| ||| |   |||| | ||| |||||||||| | ||||||| ||| |||||    
T  42248575 aaatttcgtccctctccccacttaatcactgccacgtgactaatttgttgatgtggc 42248631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 13300331 - 13300192
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||| ||||||||| |  |||||||||||| | |||| |||||| |||||||||||||| ||  ||| |||||||||||   ||    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggtctctgtattcactaatccttgcaaattactcttacattctttaataactt 13300232  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtca 176  Q
    |||| || ||||||  ||||| | ||| | ||||||||||    
T  13300231 aaaaattgatccttcaacccacttaatcagtgccacgtca 13300192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 14879386 - 14879312
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaa 110  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||| | ||||  |||||||||||||||||||    
T  14879386 ggcttaaatatatatttcatcattgcaattagggatcgtttaaaaattggtctctatattcgctaatccttgcaa 14879312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 17691218 - 17691327
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||| |||||||||||| ||||| ||| || || |||||||||||| | || | ||| ||||||||||||||||| ||  |||||||| ||||||| |    
T  17691218 aggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 17691317  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  17691318 ttaaaatttc 17691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 25647883 - 25647992
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||| ||||||| ||||  || || |||||| ||||||| |    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcat 25647982  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  25647983 ttaaaatttc 25647992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 1841455 - 1841567
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    |||||||||||| |||||||||||  ||||||||| |  |||||||||||| | |||||||| |||||||||||  |||  || |||| |||| ||||||    
T  1841455 tttaggcttaaacatgtatttcatatttgcaattaagagtcgtttaaaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaat 1841554  T
Q  132 cgtttaaaatttc 144  Q
    | |||||||||||    
T  1841555 catttaaaatttc 1841567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 19515817 - 19515927
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| | |||  ||| ||| |||| || | ||  || ||||||||| ||||||      
T  19515817 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcattgtttaatta 19515916  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  19515917 tttaaaatttc 19515927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 183624 - 183511
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaatta-tggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||||||||||| ||||||| |||||  || |||||||||||| | || | ||| ||||||||||| ||||  || || |||||| |||||    
T  183624 tttaggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaa 183525  T
Q  131 tcgtttaaaatttc 144  Q
    || |||||||||||    
T  183524 tcatttaaaatttc 183511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 35152338 - 35152499
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||| | || |  || |||||||| ||  |||  || |||| |||| |||||    
T  35152338 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaa 35152437  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    || ||||||||||  ||| |   |||| | ||| ||||| | |||| |||||||||||||||    
T  35152438 tcatttaaaattttgtccctctccccacttaatcactgcaatgtcactaatttgatgacgtg 35152499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 35038464 - 35038596
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| |||| |||||||||||| || || ||||||||| ||||   ||| ||| ||||||| ||||| ||   ||| ||| ||||||| |||||||||||    
T  35038464 atgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattacttttgtattgtttaatcatttaaaatttc 35038563  T
Q  145 atcctttgacccagtcaatgactgccacgtcat 177  Q
     |||||||||| | ||||| |||||||||||||    
T  35038564 gtcctttgaccaactcaatcactgccacgtcat 35038596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 45750270 - 45750127
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||  |||| |||| |||||||||||| |  || |||||||||   |||  ||| ||||||||||| ||||  ||  |||||||| |||||||     
T  45750270 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgcattgtttaatca 45750171  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||||||| ||||||| | | ||| |||||||||||||    
T  45750170 tttaaaatttcatcatttgaccaacttaatcactgccacgtcat 45750127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 46163033 - 46163188
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||| ||| ||||| || |||||||||||| | ||   ||| |||||||||||  |||  || ||||||||| ||||||| |||||    
T  46163033 ttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 46163132  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||  |   |||| | ||| |||| || |||| |||||||||||||||||    
T  46163133 aatttcgtctctctccccacttaattactgtcatgtcactaatttgatgacgtggc 46163188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 47999522 - 47999415
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||| ||||| || |||||||||||| | || | ||| ||||||||| | ||||  || || |||||| |||||||     
T  47999522 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatca 47999423  T
Q  134 tttaaaat 141  Q
    ||||||||    
T  47999422 tttaaaat 47999415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 40435348 - 40435418
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgca 109  Q
    |||||||||||||||||||||||||||| || |||||||||||| | ||   ||||||| |||||||||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtattcgttaatccttgca 40435418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 194
Target Start/End: Original strand, 1103463 - 1103619
Alignment:
Q  40 taaatatgtatttcatccttgcaattatggatcgtttaaaaatc--gatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||| |||||||||  | ||||||||||||   | || | ||| ||||||||||| ||||  || ||||||||| ||||||| ||||    
T  1103463 taaatatgtatttcatctttgcaattagaggtcgtttaaaaatattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 1103562  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||| ||| |   |||| | ||| |||| || |||| ||||||||||| |||||    
T  1103563 aaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgatgtggc 1103619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 24905228 - 24905325
Alignment:
Q  97 gctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||||||  || ||||||| |  |||||| ||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  24905228 gctaatccttgcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggc 24905325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 31197060 - 31197172
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| |||||||||||||||||||||| |||||||| || || |||||||||   |||| ||||||| ||||||| | ||| || |||||||     |||    
T  31197060 tttttggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgca-----taa 31197154  T
Q  131 tcgtttaaaatttcatcc 148  Q
    || |||||||||||||||    
T  31197155 tcatttaaaatttcatcc 31197172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 40714440 - 40714585
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    |||||||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| ||| ||||||| ||||  || ||||||||| ||||||    
T  40714440 tttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaat 40714539  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    | ||||||||||| || ||||||| | | ||| |||||||||||||    
T  40714540 catttaaaatttcgtcatttgaccaacttaatcactgccacgtcat 40714585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 48691170 - 48691255
Alignment:
Q  58 ttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaattt 143  Q
    ||||||||| || |||||||||||| | || | ||||||| |||| ||||||||||||||||||| || || ||| ||||||||||    
T  48691170 ttgcaattaggggtcgtttaaaaattggtcgctgtattcgttaattcttgcaaactaaccttgcaatcattgatcatttaaaattt 48691255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 49955347 - 49955488
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||  |||| |||| |||||||||||| | ||| |||||||||   || | ||| ||||||||||| ||||  || ||||||||| ||||||| ||    
T  49955347 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 49955446  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||  |||||||||| | | ||| |||||||| ||||    
T  49955447 taaaattttgtcctttgaccaacttaatcactgccacatcat 49955488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 20760932 - 20760812
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||  |||| |||| ||||| |||||| |  || |||||||||   |||| ||| ||||||||||| ||||  || ||||||||| ||||||| |    
T  20760932 aggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 20760833  T
Q  135 ttaaaatttcatcctttgacc 155  Q
    |||||||||| ||||||||||    
T  20760832 ttaaaatttcgtcctttgacc 20760812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 42533022 - 42533070
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||    
T  42533022 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaat 42533070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 49955778 - 49955654
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||  |||| |||| |||||||||||| |  || |||||||||   |||  ||| ||| ||||||| ||||  || ||||||||| |||||    
T  49955778 ttttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaa 49955679  T
Q  131 tcgtttaaaatttcatcctttgacc 155  Q
    || ||||||||||| ||||||||||    
T  49955678 tcatttaaaatttcgtcctttgacc 49955654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 4716559 - 4716626
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  4716559 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 4716626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 14879308 - 14879241
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||||||||||| |||||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  14879308 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 14879241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 155
Target Start/End: Original strand, 31050946 - 31051069
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    |||||||||||  |||| |||| |||||||||||| |  |  |||||||||   |||| ||| ||||||||||| ||||  || | ||||||| ||||||    
T  31050946 tttaggcttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaat 31051045  T
Q  132 cgtttaaaatttcatcctttgacc 155  Q
    | ||||||||||| ||||||||||    
T  31051046 catttaaaatttcgtcctttgacc 31051069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 31514409 - 31514476
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  31514409 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 31514476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 33442685 - 33442752
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  33442685 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 33442752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 52134374 - 52134307
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  52134374 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 52134307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 6518224 - 6518178
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaat 6518178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 7231678 - 7231541
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||| ||||| |  |||||||||||| |||| | ||||||  ||||| || ||||||| | ||| | || |||||  |    
T  7231678 aggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattgatcactgtattcattaatctttacaaactagctttgtaatcattaattat 7231579  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    |||||||||  || ||||||| | | ||| ||||||||    
T  7231578 ttaaaattttgtcatttgaccaacttaatcactgccac 7231541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 17188954 - 17189073
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| ||||||||||| ||||  || ||||||||| ||||||| ||    
T  17188954 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatt 17189053  T
Q  136 taaaatttcatcctttgacc 155  Q
    ||||||||| || |||||||    
T  17189054 taaaatttcgtcatttgacc 17189073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 42534445 - 42534335
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgc-attctttaatc 132  Q
    |||| ||||||||||||||||||  | |||||| || ||||||||||||   |||| ||||||| ||||| |||||||||||| || | || | ||||||    
T  42534445 taggtttaaatatgtatttcatctctacaattaggg-tcgtttaaaaattagtctctgtattcgttaatctttgcaaactaactttacaatccattaatc 42534347  T
Q  133 gtttaaaatttc 144  Q
     |||||||||||    
T  42534346 atttaaaatttc 42534335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 48692446 - 48692335
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    |||| |||||||||||||||| ||| ||| |||||  | |||||||||||| ||||   ||||||| |||| |||||||| || |||| ||  | |||||    
T  48692446 tttaagcttaaatatgtatttgatcattgtaattagaggtcgtttaaaaattgatcattgtattcgttaattcttgcaaattagccttacaaacattaat 48692347  T
Q  132 cgtttaaaattt 143  Q
    | ||||||||||    
T  48692346 catttaaaattt 48692335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 28324863 - 28324945
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||||  |||  || ||||||||| ||||||| ||||||||||| || ||||||| | | ||| |||||||||||||    
T  28324863 tcgctaatcctgacaatttacccttgcattatttaatcatttaaaatttcgtcttttgaccaacttaatcactgccacgtcat 28324945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 2828192 - 2828229
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatc 72  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  2828192 aggcttaaatatgcatttcatccttgcaattatagatc 2828229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 7371370 - 7371431
Alignment:
Q  116 ccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||||||  ||||||||||| |||||||||| | | ||| |||||||||||||    
T  7371370 ccttgcattgtttaattatttaaaatttcgtcctttgaccaacttaatcactgccacgtcat 7371431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 28011704 - 28011607
Alignment:
Q  97 gctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||||  || ||||||| |  |||||| ||||||||||  ||||| |||| | | ||| |||| ||||||| |||||||||||||||||    
T  28011704 gctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgtcacgtcactaatttgatgacgtggc 28011607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 155
Target Start/End: Complemental strand, 40714871 - 40714750
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||  |||| |||| |||||||||||| |  || |||||||||   ||   ||| ||||||||||| ||||  || | ||||||| |||||||     
T  40714871 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatca 40714772  T
Q  134 tttaaaatttcatcctttgacc 155  Q
    ||||||||||| ||||||||||    
T  40714771 tttaaaatttcgtcctttgacc 40714750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 12906026 - 12905966
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| || |||||||    
T  12906026 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgacc 12905966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 35040981 - 35040921
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    |||||||||||  |||  || ||||||||| ||||||| ||||||||||| ||||||||||    
T  35040981 tcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacc 35040921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 7e-46; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 21627712 - 21627869
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||   |||||||||||||||||||||||| ||||||| || |||||| |    
T  21627712 aggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaaactagccttgcaatcattaatcat 21627811  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||    
T  21627812 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtg 21627869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 33517963 - 33517804
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | || | ||||||||||||||||||||| || ||||||| || |||||| |    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcat 33517864  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  33517863 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 33517804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 3059685 - 3059528
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| |    
T  3059685 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 3059586  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||||||| ||||||| | | ||| ||||||| |||| |||||||||||||||    
T  3059585 ttaaaatttcatcttttgaccaacttaatcactgccatgtcactaatttgatgacgtg 3059528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 30804291 - 30804131
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||| |||||||||||||||||||||||||||| || |||||||||||| |||| | |||||||||||| ||||||||||| | ||||| || ||||||     
T  30804291 taggattaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaattcttgcaaactagcgttgcaatcattaatca 30804192  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  30804191 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 30804131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 11434804 - 11434954
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||||||||||||||| || |||||||||||| | ||   ||||||||||||| |||||||||| ||||||| || |||||| ||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcgttgcaaactagccttgcaatcattaatcattta 11434903  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatga 188  Q
    ||||||| |||||||||||||| ||| |||||||||||| |||||||||||    
T  11434904 aaatttcgtcctttgacccagttaatcactgccacgtcactaatttgatga 11434954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 30726189 - 30726032
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||| | || ||||||     
T  30726189 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaatca 30726090  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgt 191  Q
    ||||||||||| |||||||||| | | ||| |||||||||||| ||||| ||||||||    
T  30726089 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgt 30726032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 33647382 - 33647221
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||||||||||| || ||||||    
T  33647382 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcattaatc 33647283  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
     ||||||||||  |||||||||  | | ||| ||||||||||||  ||||||||||| ||||    
T  33647282 atttaaaatttagtcctttgacaaacttaatcactgccacgtcacaaatttgatgacatggc 33647221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 30337846 - 30337688
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||| || || ||||||||| | || | ||| |||||||||||||||||||| ||||||| || |||||| ||    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatt 30337747  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| |||||||||| | | ||| |||||||||||| |||||||||||| ||||    
T  30337746 taaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgacatggc 30337688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 681158 - 680998
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | |||| |||||||||||||||||||||||| ||||||| || ||||||     
T  681158 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatca 681059  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| ||| |   |||||| ||| |||||||||||| | ||| | |||||||||    
T  681058 tttaaaatttcgtccatgagcccagttaattactgccacgtcactgattagctgacgtggc 680998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 17734195 - 17734354
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | |    ||| | |||||||||||||||||| ||||||| || |||||| |    
T  17734195 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcattaatcat 17734294  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  17734295 ttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgacgtggc 17734354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 12081069 - 12080908
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||||||||||||||||| |  ||||||||||||   || | ||||||||||||||||||||||||  |||||| || ||||    
T  12081069 ttttaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatcattaa 12080970  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    || ||||||||||| |||||||||| | | ||| |||| || |||| ||||| |||||||||    
T  12080969 tcatttaaaatttcgtcctttgaccaacttaattactgtcatgtcactaattcgatgacgtg 12080908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 679865 - 680024
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | |||| |||||||||||||||||||||||| ||||||| || |||||| |    
T  679865 aggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 679964  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| ||| |   |||||| ||| |||||||| ||| | ||| | |||||||||    
T  679965 ttaaaatttcgtccatgagcccagttaattactgccacatcactgattagctgacgtggc 680024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 20652076 - 20651931
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| || | ||||||||||| |||||||||||| |||| | |||||| ||||||||||||||| | ||||||| || |||||| |    
T  20652076 aggcttaaatatgtatttaattcctgcaattatgggtcgtttaaaaattgatccctgtattcactaatccttgcaaaccagccttgcaatcgttaatcat 20651977  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaa 180  Q
    |||||||||| ||| |  ||||||| ||| ||||||||||||||||    
T  20651976 ttaaaatttcgtccctgaacccagttaattactgccacgtcattaa 20651931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 33517537 - 33517692
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| | || | ||| ||||||||||| ||||  || ||||||||| ||||||| |||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 33517636  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||| |   |||| | ||| ||||| |||||| |||||||||||||||||    
T  33517637 aatttcgtccctctccccacttaatcactgctacgtcactaatttgatgacgtggc 33517692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 20651008 - 20651151
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||| | |  | |||||||||||||||||||||| | ||||||| || ||||||     
T  20651008 taggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgtattcgctaatccttgcaaaccagccttgcaatcattaatca 20651107  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| ||| |    ||||| ||| |||||||||||||    
T  20651108 tttaaaatttcgtccatgagtccagttaataactgccacgtcat 20651151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 21628142 - 21627983
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||| | || | ||| |||||||||||  |||  || ||||||||| ||||||| |    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 21628043  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||  ||| |   |||| | ||| |||||||||||| |||||||||||||||||    
T  21628042 ttaaaattttgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 21627983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 13379912 - 13379802
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| |||| |||||||| || |||||||||||| | || | |||||||||||| ||||||||||| ||||||| || ||||||     
T  13379912 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatcattaatca 13379813  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  13379812 tttaaaatttc 13379802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 11393233 - 11393096
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||| ||||||||||||| ||| ||||| || |||||||||||| | || ||||||||||||||||||||||||||  |||||| || |||||| |    
T  11393233 aggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaattggtccccgtattcgctaatccttgcaaactagacttgcaatcattaatcat 11393134  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    || ||||||| || ||||||| | | ||| ||||||||    
T  11393133 ttcaaatttcgtcatttgaccaacttaatcactgccac 11393096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 207
Target Start/End: Original strand, 15115339 - 15115510
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| | || |  || ||| ||||||||||||| || |||||||   ||||||| ||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatt 15115438  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggctctggtaattggt 207  Q
    ||||||||  |||||  ||||| | ||| ||| ||||||||| || ||  |||||||||| || ||||||||    
T  15115439 taaaatttagtccttacacccacttaattactaccacgtcatcaaattactgacgtggctatgttaattggt 15115510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 182
Target Start/End: Original strand, 12407508 - 12407654
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||| | |||| ||||||||||||||||| ||| ||  || |||   ||||||| ||    
T  12407508 ggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatccttgtaaattactctagcaaagtttaatcatt 12407607  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatt 182  Q
    ||||||||  ||| |  ||| ||| ||| |||||||||||| |||||    
T  12407608 taaaatttggtccctgaacctagttaattactgccacgtcactaatt 12407654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 30725760 - 30725917
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||| |||||||||| || |||||||||||| | |||| ||| |||||||||||  |||  || ||||||| | ||||||| ||    
T  30725760 ggcttaaatatgtatttcattcttgcaatta-gggtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcatt 30725858  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||| |   |||| | ||| ||||||| |||| |||||||||||||||||    
T  30725859 taaaatttcgtccctctccccatttaatcactgccatgtcactaatttgatgacgtggc 30725917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 26463174 - 26463319
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||| |||| |||||||| || |||||||||||| | || | ||||||| ||||||| ||||| || |||||||   |||||    
T  26463174 ttttaggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaa 26463273  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtca 176  Q
    || ||||||||||| ||| |   |||||| ||| ||||||||||||    
T  26463274 tcatttaaaatttcgtccctcatcccagttaatcactgccacgtca 26463319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 8090360 - 8090248
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||||||| | ||   |||||| |||||||||||||| || |||||||   |||||    
T  8090360 ttttaggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaa 8090261  T
Q  131 tcgtttaaaattt 143  Q
    || ||||||||||    
T  8090260 tcatttaaaattt 8090248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 8089442 - 8089584
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||||||| | ||| |||||||| || |||||||||||| | || |  || ||| ||||||||||||| || ||||||||| ||||||| |    
T  8089442 aggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatcat 8089541  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||| ||| || ||||| | |||||| | ||||||||    
T  8089542 ttaaaatttcgtcccttaacccacttaatgaccgacacgtcat 8089584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 30337447 - 30337557
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || |||||||||  ||||||     
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatca 30337546  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  30337547 tttaaaatttc 30337557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 194
Target Start/End: Original strand, 12080638 - 12080794
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||| ||||||||||||||||||||| || |||||||||||| | || | ||| ||||||||| | ||||  || || |||||| ||||||| ||||    
T  12080638 cttaaatttgtatttcatccttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcattta 12080737  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||| ||| |   |||| | ||| ||||||| |||| ||||||||||| |||||    
T  12080738 aaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgatgtggc 12080794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 15116660 - 15116556
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||| |||||||||||| |||||||||||| || |||||||||||| | ||  |||| |||||||||||||||||||| |||||||   ||||||| ||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcatt 15116561  T
Q  136 taaaa 140  Q
    |||||    
T  15116560 taaaa 15116556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 30803859 - 30804019
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||| ||||||||||||||||||||||||| || |  |||||||||||| |||||  ||| ||| ||||||| ||||  || |||| |||| |||||||     
T  30803859 tagggttaaatatgtatttcatccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatca 30803958  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| ||| |   |||| | ||| |||||||  ||| |||||||||||||||||    
T  30803959 tttaaaatttcgtccctctccccacttaatcactgccatctcactaatttgatgacgtggc 30804019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 12408601 - 12408487
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||||||||||||||| |||||| || | |||||||| | | ||   ||||||||||||||||||||| || |||||||   |||||||     
T  12408601 taggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggtccttgtattcgctaatccttgcaaattatccttgcaaagtttaatca 12408502  T
Q  134 tttaaaatttcatcc 148  Q
    |||||||||| ||||    
T  12408501 tttaaaatttgatcc 12408487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 17734590 - 17734484
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||| ||||   ||| |||||||||||  |||  || ||||||||| ||||||| |||    
T  17734590 gcttaaatatgtatttgatccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgcattgtttaatcattt 17734491  T
Q  137 aaaattt 143  Q
    |||||||    
T  17734490 aaaattt 17734484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 22617886 - 22618005
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaa-tcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    |||||||||||||||||||||||||||| |  ||||||||||| | | |||| | ||||||||||||||||| |||| |||||||    |||||| ||||    
T  22617886 ttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattgggtctctgcattcgctaatccttgcagactacccttgcaaatattaatcattta 22617985  T
Q  138 aaatttcatcctttgaccca 157  Q
    |||| || ||| ||||||||    
T  22617986 aaatgtcgtccattgaccca 22618005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 194
Target Start/End: Original strand, 33646970 - 33647121
Alignment:
Q  43 atatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatt 142  Q
    |||| |||||||||||| |||||| || |||||||||||  |||| | ||| ||||||||| |  |||  || ||||||||| ||||||| |||||||||    
T  33646970 atatctatttcatccttacaattaagggtcgtttaaaaagtgatccctgtaatcgctaatcttgccaatttacccttgcattatttaatcatttaaaatt 33647069  T
Q  143 tcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||  |   |||| | ||| |||||||||||| |||||||||||||||||    
T  33647070 tcgtctctctccccatttaatcactgccacgtcactaatttgatgacgtggc 33647121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 3059255 - 3059415
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaa-atcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    |||| |||||||||||||||||||||||||||| || |||||||||| || | ||   ||| ||||||||||| ||||  || ||||||||| |||||||    
T  3059255 taggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaatattg-tccatgtaatcgctaatcctagcaatttacccttgcattgtttaatc 3059353  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
     ||||||||||| ||| |   | || | ||| ||||||| |||| |||| ||||||||||||    
T  3059354 atttaaaatttcgtccctctcctcacttaatcactgccatgtcactaatgtgatgacgtggc 3059415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 7160813 - 7160945
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| |||| |||||||||||| |  || |||||||||   |||| ||| ||||||||||| ||||  ||  |||||||| ||||||| |||||||||||    
T  7160813 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 7160912  T
Q  145 atcctttgacccagtcaatgactgccacgtcat 177  Q
     |||||||||| | | ||| ||| |||||||||    
T  7160913 gtcctttgaccaacttaatcactaccacgtcat 7160945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 177
Target Start/End: Complemental strand, 21836461 - 21836315
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatc-gatctccgtattcgctaatccttgcaaactaaccttgcattcttta 129  Q
    ||||||||||||  |||| ||||||||||||||||| |  || |||||||||  | |||  ||| |||||||||||  |||  || ||||||||| ||||    
T  21836461 ttttaggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttctt-gtaatcgctaatcctgacaatttacccttgcattgttta 21836363  T
Q  130 atcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||| ||||||||||| |||||||||| | | ||| ||||||| |||||    
T  21836362 atcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcat 21836315  T

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Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 28000476 - 28000543
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  28000476 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 28000543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 362961 - 363026
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||    
T  362961 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtg 363026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 6517503 - 6517621
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||  |||| |||| |||||||||||| |  || |||||||||   |||  ||| ||||||||||| ||||  || ||||||||| ||||||| ||    
T  6517503 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaattta-ccttgcattgtttaatcatt 6517601  T
Q  136 taaaatttcatcctttgacc 155  Q
    ||||||||| ||||||||||    
T  6517602 taaaatttcgtcctttgacc 6517621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 21836090 - 21836149
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgac 154  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| |||||||||    
T  21836090 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgac 21836149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 22502833 - 22502915
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||||  |||  || ||||||||| ||||||| ||||||||||| |||||||||| | | ||| ||||||| |||||    
T  22502833 tcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaataactgccaagtcat 22502915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 22503141 - 22503059
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| ||||  || ||||||||| ||||||| |||||| |||| || ||||||| | | ||| |||||||||||||    
T  22503141 tcgctaatcctggcaatttatccttgcattgtttaatcatttaaattttcgtcatttgaccaacttaatcactgccacgtcat 22503059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 31407245 - 31407163
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||||  |||  || ||||||||| ||||||| ||||||||||| |||||||||| | | ||| |||| ||||||||    
T  31407245 tcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcat 31407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 26464627 - 26464582
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaa 81  Q
    |||||||||||||||||||||| |||||||| || || ||||||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaa 26464582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 8418461 - 8418418
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||||||||||||| |||||||||||||| | |||||||||||||    
T  8418461 cttaaatatgtatt-catccttgcaattaggaatcgtttaaaaat 8418418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 7452236 - 7452073
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| ||||||||||||||||| ||||||||||||| || |||||||||||| | |||| |||||||||||||||||||||||| ||||||| || ||||    
T  7452236 tttttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaa 7452137  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  7452136 tcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 7452073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 33 - 188
Target Start/End: Complemental strand, 39539349 - 39539194
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| | ||   ||| ||| |||| |||||||| || |||||||||||||||||    
T  39539349 ttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatc 39539250  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatga 188  Q
     ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  39539249 atttaaaatttcgtcctttgacccagttaatgactgccacatcattaatttgatga 39539194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 34765378 - 34765538
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||||| ||   |||||||||||||||||||||||| ||||||| || ||||||     
T  34765378 taggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatca 34765477  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| |||||||| | | | ||| |||| ||||||| |||||||||||||||||    
T  34765478 tttaaaatttcgtcctttgatcaacttaatcactgtcacgtcactaatttgatgacgtggc 34765538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 194
Target Start/End: Original strand, 44967071 - 44967227
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||| ||||||||||||| || |||||||||||| | |||| |||||||||||||||| ||||||| ||||||| || |||||| ||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttacaaactagccttgcaatcattaatcattta 44967170  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  44967171 aaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 44967227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 51692949 - 51692789
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || ||||||     
T  51692949 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 51692850  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| |||||||||| | | ||| |||| || |||| ||||| |||||||||||    
T  51692849 tttaaaatttcgtcctttgaccaacttaatcactgtcatgtcactaattcgatgacgtggc 51692789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 18831745 - 18831590
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| | || | ||||||||||||| |||||||||||||||||| || |||||| ||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcattgcaaactaaccttgcaatcattaatcatt 18831646  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgt 191  Q
    |||||||||||| ||||||| | | ||| || ||||||||| | ||||||||||||    
T  18831645 taaaatttcatcatttgaccaacttaatcaccgccacgtcacttatttgatgacgt 18831590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 46661343 - 46661184
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | || | |||||  |||||||| |||||||| ||||||| || |||||| |    
T  46661343 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcattaatcat 46661244  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  46661243 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 46661184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 36008840 - 36009002
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||||||||| | || | ||||||||||||| |||||||||| ||||||| || |||||    
T  36008840 tttaggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattcgctaatcattgcaaactagccttgcaatcattaat 36008939  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | ||||||||||  |||||||||| | | ||| ||| |||||||| |||||||||||||||||    
T  36008940 catttaaaatttagtcctttgaccaacttaatcactaccacgtcactaatttgatgacgtggc 36009002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 50418666 - 50418824
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||| |||||||||||||||| ||||||| || ||||||     
T  50418666 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatca 50418765  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||    
T  50418766 tttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgacgtg 50418824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 35027995 - 35028156
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||| | |  | |||||||||||||||||||||||| ||||||| || ||||||    
T  35027995 ttaggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatc 35028094  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
     ||||||||||| || ||||||| | | ||| || ||||||||| |||||||||||||||||    
T  35028095 atttaaaatttcgtcttttgaccaacttaatcaccgccacgtcactaatttgatgacgtggc 35028156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 52909683 - 52909523
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| | |||  |||||||||||||||||||||||| ||||||| || |||||      
T  52909683 taggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtctatgtattcgctaatccttgcaaactagccttgcaatcattaatta 52909584  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| |||||||||| | | ||| |||| |||||||  |||| ||||| |||||    
T  52909583 tttaaaatttcgtcctttgaccaacttaatcactgtcacgtcacaaattcgatgatgtggc 52909523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 17355924 - 17356083
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||| | |  | ||||||||||||| ||||||||||  ||||||||| |||||| |    
T  17355924 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgtattcgctaatctttgcaaactagtcttgcattcattaatcat 17356023  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| || ||||||| | | ||| |||||||||||| |||||||||||||||||    
T  17356024 ttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 17356083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 13058411 - 13058258
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||| | || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| |    
T  13058411 aggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 13058312  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatga 188  Q
    |||||||||  |||||||||| | | ||| |||||||||||| |||||||||||    
T  13058311 ttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatga 13058258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 49879208 - 49879365
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| | |||||||||||||||||| ||||||| || |||||| |||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcattt 49879307  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||| |||||||||| | | ||| ||||||| |||| |||||||||||||||||    
T  49879308 aaaatttcgtcctttgaccaatttaatcactgccatgtcactaatttgatgacgtggc 49879365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 24349672 - 24349832
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || ||||||     
T  24349672 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 24349771  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| ||| |   |||||| ||| |||||||||||| |||| |||||| |||||    
T  24349772 tttaaaatttcgtccctctccccagttaatcactgccacgtcactaatctgatgaggtggc 24349832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 35 - 239
Target Start/End: Complemental strand, 30642575 - 30642371
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||| ||||||| |||| ||| ||||||||||| || |||||||||  |||   ||| ||| ||||||| ||||| ||  ||||||   ||||||| |    
T  30642575 aggctttaatatgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatcat 30642476  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggctctggtaattggtcaacccacacgttaaatgacaatttta 234  Q
    |||||||||| ||| |||||||| | |||||||||||||||||||||||||||||||| || || ||||||| |||||||||||| |||||||| ||||     
T  30642475 ttaaaatttcgtcccttgacccacttaatgactgccacgtcattaatttgatgacgtgactttgttaattggccaacccacacgtgaaatgacatttttg 30642376  T
Q  235 cccct 239  Q
    |||||    
T  30642375 cccct 30642371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 43155532 - 43155687
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||| ||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| |||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcgttaatcatttaa 43155631  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||  || ||||||| | | ||| |||||||||||| ||||||||||| |||||    
T  43155632 aatttagtcatttgaccaacttaatcactgccacgtcactaatttgatgatgtggc 43155687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 35 - 172
Target Start/End: Original strand, 10780712 - 10780849
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | ||   | |||||||||||||||||||||| ||||||| || |||||| |    
T  10780712 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcat 10780811  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    ||||||||||||||||||||||  | ||||||||||||    
T  10780812 ttaaaatttcatcctttgacccgattaatgactgccac 10780849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 35 - 172
Target Start/End: Original strand, 10974321 - 10974458
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | ||   | |||||||||||||||||||||| ||||||| || |||||| |    
T  10974321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcat 10974420  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    ||||||||||||||||||||||  | ||||||||||||    
T  10974421 ttaaaatttcatcctttgacccgattaatgactgccac 10974458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 24411780 - 24411681
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||| |||| | |||||||||||||||||||||||||||||||| || |||||    
T  24411780 tttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccctgtattcgctaatccttgcaaactaaccttgcaatcattaat 24411681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 37248630 - 37248475
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||||||||||||  |||||| || |||||| ||| |    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatttta 37248531  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| |||||||||| | | ||| | |||||||||| |||||||||||||||||    
T  37248530 aatttcgtcctttgaccaatttaatcattgccacgtcactaatttgatgacgtggc 37248475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 24711512 - 24711350
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||| | ||   ||  ||| |||||||||||||||| ||||||| || |||||    
T  24711512 tttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaat 24711413  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | ||||||||||| || ||||||| | | ||| |||||||||||| |||||||||||| ||||    
T  24711412 catttaaaatttcgtcatttgaccaatttaatcactgccacgtcactaatttgatgacatggc 24711350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 24350861 - 24350724
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | | |||||||||||||||||||||| | ||||| || |||||| |    
T  24350861 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatccttgcaaactagctttgcaatcattaatcat 24350762  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    |||||||||| |||||||||||  | ||||||||||||    
T  24350761 ttaaaatttcgtcctttgacccgattaatgactgccac 24350724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 23613706 - 23613550
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||| |||| | ||||||||||||||||||||| ||  |||||| ||  ||||| ||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatccttgcaaattagtcttgcaatcactaatcatt 23613607  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||  | |||||||| | | ||| ||| |||||||| |||||||||||||||    
T  23613606 taaaatttagttctttgaccaacttaatcactaccacgtcactaatttgatgacgtg 23613550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 11108265 - 11108147
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||   ||||||||||||||||||||||||  |||||| || |||||| |||||    
T  11108265 ttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccttgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaa 11108166  T
Q  139 aatttcatcctttgaccca 157  Q
    ||||| ||| ||| |||||    
T  11108165 aattttatctttttaccca 11108147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 1179229 - 1179092
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||| ||||||||| || |||||||||||| | ||   |||||||||||||||||||||||| ||||||| || |||||| |    
T  1179229 aggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcat 1179130  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    ||||||||||||||||| ||| | | ||| ||||||||    
T  1179129 ttaaaatttcatcctttaaccaacttaatcactgccac 1179092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 15507674 - 15507831
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||||||||||||| || |||||||||||| | || |  |||||||||||||||||||||||  | |||| || ||| || |||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagtcgtgcaatcattattcattt 15507773  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
     ||||||| |||||||||| | | ||| | || ||||||| |||||||||||||||||    
T  15507774 caaatttcgtcctttgaccaacttaatcattgtcacgtcactaatttgatgacgtggc 15507831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 53129935 - 53129778
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||| | || |||||||||||| ||||  |||| ||||||||||||||||  || ||| ||||| ||| |||||    
T  53129935 aggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgtttcatcgt 53129836  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||||| ||| |   |||| | ||| |||||||| ||| |||||||||||||||    
T  53129835 ttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtg 53129778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 10781914 - 10781754
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | ||   |||||||||||||||||||||||| ||||||| || ||||||     
T  10781914 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatca 10781815  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| ||| |   |||||| ||  |||| ||||||| |||| |||||| |||||    
T  10781814 tttaaaatttcgtccctctccccagttaaccactgtcacgtcactaatctgatgaggtggc 10781754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 37976156 - 37976311
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    ||||||||||||||||||||||||||||  | |||||||||||  | |  | ||||||||||||| ||||||||||  |||||| || |||||| |||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgtattcgctaatctttgcaaactagtcttgcaatcattaatcatttaa 37976255  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| |||||||||| | | ||| | |||||||||| ||||| |||||||||||    
T  37976256 aatttcgtcctttgaccaacttaatcattgccacgtcactaattcgatgacgtggc 37976311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 38 - 193
Target Start/End: Original strand, 53701814 - 53701969
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||| ||||||||||||||||||| || |||||||||||| |||||| ||| || ||||||||  |||  || ||||||||| ||||||| ||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgcattgtttaatcattta 53701913  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtgg 193  Q
    ||||||| ||| |   |||| | ||| |||||||||||| ||||||||||||||||    
T  53701914 aaatttcttccctctccccacttaatcactgccacgtcactaatttgatgacgtgg 53701969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 14802163 - 14802006
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||| | ||   |||||||||||| || ||||||||  |||||| || |||||| ||    
T  14802163 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcatt 14802064  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| |||||||||| | | ||| |||||||| ||| ||||||| |||||||||    
T  14802063 taaaatttcgtcctttgaccaacttaatcactgccacatcactaatttg-tgacgtggc 14802006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 189
Target Start/End: Original strand, 54086698 - 54086848
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| || |||||||||||| | |||| ||||||||||||||||  || |||  |||| | || |||||| |||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttcaaagctagtcttgtaatcattaatcatttaa 54086797  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgac 189  Q
    |||||  |||||||||| | | ||| |||||||||||| ||||| ||||||    
T  54086798 aattttgtcctttgaccaacttaatcactgccacgtcactaattcgatgac 54086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 11448158 - 11448049
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||||||||| ||| || ||||| || |||||||||||| |||||| ||| ||||||||||||||||| || ||||||||| ||||||| |    
T  11448158 aggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcat 11448059  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  11448058 ttaaaatttc 11448049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 194
Target Start/End: Original strand, 14801730 - 14801894
Alignment:
Q  30 gttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattcttta 129  Q
    |||| |||||||||||||||||||||||||||||||| |  |||||||||||| | |||  ||| |||||||||||  |||  || ||||| ||| ||||    
T  14801730 gtttaaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgttta 14801829  T
Q  130 atcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||| ||||||||||| ||| |   |||| | ||| |||||||||||| |||||||||||||||||    
T  14801830 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 14801894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 55867544 - 55867401
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| |||| |||||||| || |||||||||||| | ||   ||| ||| |||||||||||||||| ||||||||| |||||||     
T  55867544 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatca 55867445  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| ||| |   |||||| ||| |||||||||||||    
T  55867444 tttaaaatttcgtccctattcccagttaatcactgccacgtcat 55867401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 50419070 - 50418957
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||||| | || |  || ||||||||||| |||| ||| ||||||||| |||||    
T  50419070 ttttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaa 50418971  T
Q  131 tcgtttaaaatttc 144  Q
    || |||||||||||    
T  50418970 tcatttaaaatttc 50418957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 148185 - 148042
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||| | || |  |||||| ||||||||||||||||  |||||| || ||||||     
T  148185 taggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctttattcgttaatccttgcaaactagtcttgcaatcattaatca 148086  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| ||| |   |||||| ||| |||| ||||||||    
T  148085 tttaaaatttcgtccatgagcccagttaattactgtcacgtcat 148042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 35028427 - 35028268
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |  ||||||||| | ||    | |||||||||||||||||  || ||||||||| ||||||| |    
T  35028427 aggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgcattgtttaatcat 35028328  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| ||  |   |||| | ||| |||||||||||| |||||||||||||||||    
T  35028327 ttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtggc 35028268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 54713664 - 54713770
Alignment:
Q  71 tcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgcc 170  Q
    ||||||||||||  ||||| |||||||||||||||||||||||| ||||||| || |||||| ||||||||||| ||||||||||| || ||| | ||||    
T  54713664 tcgtttaaaaattaatctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccctgttaatcattgcc 54713763  T
Q  171 acgtcat 177  Q
    | |||||    
T  54713764 atgtcat 54713770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 13058033 - 13058145
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||| | |||| ||| ||||||||||| | ||  || || |||||| ||||||    
T  13058033 tttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaat 13058132  T
Q  132 cgtttaaaatttc 144  Q
    | |||||||||||    
T  13058133 catttaaaatttc 13058145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 34765810 - 34765650
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||| | |    ||| ||||||||||| ||||  || | ||||||| |||||||     
T  34765810 taggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatca 34765711  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| ||| |   |||| | ||| |||||||||||| |||||||| ||||||||    
T  34765710 tttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgaggacgtggc 34765650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 147319 - 147426
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||||| | |||||| || |||||||||||| | || | ||||||||||||||||||||||||  |||||| || |||||  ||    
T  147319 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaataatt 147418  T
Q  136 taaaattt 143  Q
    ||||||||    
T  147419 taaaattt 147426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 27068905 - 27069051
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||  |||| |||| |||||||||||| | ||| |||||||||   || | ||| ||||||||||| ||||  || ||||||||| |||||    
T  27068905 ttttaggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaa 27069004  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    || ||||||||||| |||||||||| | | ||| |||||||||||||    
T  27069005 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcat 27069051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 51692551 - 51692661
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||| |||||  ||| |||||||||||  |||  || ||||||||| |||||||     
T  51692551 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatca 51692650  T
Q  134 tttaaaatttc 144  Q
     ||||||||||    
T  51692651 cttaaaatttc 51692661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 53129505 - 53129662
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaa-tcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||| | | ||   ||||| |||||||||| |||||||  |||||| || ||||||     
T  53129505 aggcttaaatatgtattttatcattgcaattagggatcgtttaaaaaattggtcat-gtatttgctaatccttacaaactagtcttgcaatcattaatca 53129603  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||||| | |||||||| | | ||| ||||| || ||| |||||||||||||||    
T  53129604 tttaaaatttcgttctttgaccaacttaatcactgcaacttcactaatttgatgacgtg 53129662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 24711110 - 24711219
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || | ||||||| ||||||| |    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatcat 24711209  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  24711210 ttaaaatttc 24711219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 52909254 - 52909411
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||| ||||||||| || ||||| |||||| | || | ||| |||||||||||  |||  || ||||||||| ||||||| |||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 52909353  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||| ||| |   |||| | ||| ||||||| |||| ||||||||||| |||||    
T  52909354 aaaatttcgtccatctccccacttaatcactgccatgtcactaatttgatgatgtggc 52909411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 5368946 - 5369054
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| | ||   ||| ||||||||||| ||||  || || |||||| ||||||| |    
T  5368946 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcat 5369045  T
Q  135 ttaaaattt 143  Q
    |||||||||    
T  5369046 ttaaaattt 5369054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 7451830 - 7451942
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||| ||||||| ||||  || || |||||| ||||||    
T  7451830 tttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaat 7451929  T
Q  132 cgtttaaaatttc 144  Q
    | |||||||||||    
T  7451930 catttaaaatttc 7451942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 5369295 - 5369176
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||| ||||||  || || || |||||||||||| | || | | ||||| |||||||||||||||| ||||||| || |||||| ||    
T  5369295 ggcttaaatatgtatttgatccttataagtaggggtcgtttaaaaattggtccctgcattcgttaatccttgcaaactagccttgcaatcattaatcatt 5369196  T
Q  136 taaaatttcatcctttgacc 155  Q
    ||||||||  ||||||||||    
T  5369195 taaaatttagtcctttgacc 5369176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 37976584 - 37976425
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    |||||||||||||||||||||||| | ||||||| || |||||||||||| |||| | ||| |||||||| ||  |||  || | ||||||| |||||||    
T  37976584 ttaggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatc 37976485  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
     ||||||||||| ||  |   |||| | ||| ||||||| |||| |||||||||||||||    
T  37976484 atttaaaatttcgtcactctccccacttaatcactgccatgtcactaatttgatgacgtg 37976425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 37248238 - 37248344
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||| | ||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || ||||||||| ||||||| ||||    
T  37248238 cttaaatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 37248337  T
Q  138 aaatttc 144  Q
    |||||||    
T  37248338 aaatttc 37248344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 44967468 - 44967358
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| |||||||||||||  | |||||||||||| | || | ||| ||||||||||| ||||  || || |||||| |||||||     
T  44967468 taggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatca 44967369  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  44967368 tttaaaatttc 44967358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 187
Target Start/End: Complemental strand, 17356348 - 17356199
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    |||||||||||||||||||||| |||||| || |||||||||||| | || | ||||||||||||| | ||||  ||  |||||||| ||| ||| ||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcattta 17356249  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatg 187  Q
    ||||||| ||| |   |||| | ||| |||| ||||||| ||||||||||    
T  17356248 aaatttcgtccctctccccacttaatcactgtcacgtcactaatttgatg 17356199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 18831348 - 18831457
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| |||||| |||||| || |||||||||||| | || | ||| ||||||||||| | ||  || ||||||||| ||||||| |    
T  18831348 aggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcat 18831447  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  18831448 ttaaaatttc 18831457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 48528484 - 48528560
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaa 111  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | |||| |||||||  ||||||||||||    
T  48528484 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgtcaatccttgcaaa 48528560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 49879596 - 49879496
Alignment:
Q  44 tatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaattt 143  Q
    ||||||||| ||||||||||||| || |||||||||||  |||||| ||| |||||||||||  |||  || ||||||||| ||||||| ||||||||||    
T  49879596 tatgtatttgatccttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 49879497  T
Q  144 c 144  Q
    |    
T  49879496 c 49879496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 15508105 - 15507943
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||| ||||||||||||||||||||||||||||| || |||||||||||| | ||   ||| |||||||||||  |||  || | ||||||  |||||    
T  15508105 ttttagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg-tccttgtaatcgctaatcctgacaatttaccattgcatggtttaa 15508007  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||| ||  |   |||| | ||| |||||| ||||| |||||||||||||||||    
T  15508006 tcatttaaaatttcgtctctctccccacttaatcactgccgcgtcactaatttgatgacgtggc 15507943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 23613308 - 23613417
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | ||   ||| ||||||||| | ||||  || || |||||| ||||||| |    
T  23613308 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaatcat 23613407  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  23613408 ttaaaatttc 23613417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 35508671 - 35508510
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    |||||||||||||||||||| ||| ||||||||| || ||||||||||||  |||   ||| ||| |||| ||  |||  || ||||||||| |||||||    
T  35508671 ttaggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatc 35508572  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
     ||||||||||| |   |   |||| | ||| ||||||| ||||||||||||||||||||||    
T  35508571 atttaaaatttcgtatctctccccacttaatcactgccatgtcattaatttgatgacgtggc 35508510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 8439651 - 8439496
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||| ||||| |||| |||| | ||||| || | |||||||||| ||||   ||| ||| ||||||| ||||| || |||||||  | |||||| ||    
T  8439651 ggcttaagtatgtgtttcgtcct-gtaattaagggttgtttaaaaattgatcattgtaatcgttaatcctagcaaattatccttgcaaacattaatcatt 8439553  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||| ||| |||||||| | ||| || ||||||||| |||||||||||||||    
T  8439552 taaaatttcgtcccttgacccacttaatcaccgccacgtcagtaatttgatgacgtg 8439496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 16006219 - 16006151
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatcctt 106  Q
    ||||||||||||||| || |||||||||| || |||||||||||| | |||| ||||||||||||||||    
T  16006219 cttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 16006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 194
Target Start/End: Original strand, 24411360 - 24411516
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||||||| ||||||| || | |||||||||| | || | ||| ||||||| |||  |||  || ||||||||| ||||||| ||||    
T  24411360 cttaaatatgtatttcatcctagcaattaggggtagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcattta 24411459  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||  ||| ||| |   |||| | ||| ||| |||||||| |||||||||||||||||    
T  24411460 aagattcgtccctcttcccacttaatcactcccacgtcactaatttgatgacgtggc 24411516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 43155926 - 43155816
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||  ||||| || |||||||||||| | || | ||| ||| ||||||| ||||  || || |||||| |||||||     
T  43155926 taggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatca 43155827  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  43155826 tttaaaatttc 43155816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 54858559 - 54858701
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| |||||||||||  |||  || ||||||||| ||||||| |    
T  54858559 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 54858658  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||| |||||||||| | | ||| |||||||||||||    
T  54858659 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcat 54858701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 41583661 - 41583584
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaa 111  Q
    ||||||| ||||||| |||||||| |||||||| || || ||||||||| ||| || ||||||||||||||| |||||    
T  41583661 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaa 41583584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 42738108 - 42738189
Alignment:
Q  113 taaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |  |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  42738108 taaccttgcaattgttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 42738189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 50750896 - 50751028
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| ||||| || |||||||| |  ||||||||||||   || | ||| ||||||||||| ||||| |||||||||||| ||||||| ||||||| |||    
T  50750896 atgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattc 50750995  T
Q  145 atcctttgacccagtcaatgactgccacgtcat 177  Q
     ||  |  ||||| | |||||||||||||||||    
T  50750996 gtcactgaacccacttaatgactgccacgtcat 50751028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 54087127 - 54087015
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||| ||||||||||||||||||| ||| ||||| || |||||||||||| | || | ||| ||| ||||| |  |||  || ||||||||| ||||||    
T  54087127 tttagacttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaat 54087028  T
Q  132 cgtttaaaatttc 144  Q
    | |||||||||||    
T  54087027 catttaaaatttc 54087015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 1178056 - 1178130
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaa 110  Q
    |||||||||||||||||||||||||| |||||  | |||||||||||| | ||   ||||||||||||||||||||    
T  1178056 aggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattggtc-atgtattcgctaatccttgcaa 1178130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 10408301 - 10408174
Alignment:
Q  50 tttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcct 149  Q
    |||| |||||||||||| |  || |||||||||   || | ||| ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| ||||    
T  10408301 tttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcct 10408202  T
Q  150 ttgacccagtcaatgactgccacgtcat 177  Q
    |||||| | | ||| |||||||| ||||    
T  10408201 ttgaccaacttaatcactgccacatcat 10408174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 34837165 - 34837232
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  34837165 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 34837232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 38012476 - 38012409
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  |||||||||| | | ||| |||||||||||| ||||||||||| |||||    
T  38012476 ttaatcgtttaaaatttggtcctttgaccaaattaatcactgccacgtcactaatttgatgatgtggc 38012409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 32062679 - 32062779
Alignment:
Q  126 tttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggctctggtaattggtcaacccacacgttaaatg 225  Q
    ||||||| ||||||||||| ||||| |||||  | |||||||| || | | ||||||||||| |||| ||||| ||||||| |||||||||||| |||||    
T  32062679 tttaatcatttaaaatttcgtcctt-gacccgcttaatgactgtcatgccgttaatttgatggcgtg-ctctgttaattggccaacccacacgtgaaatg 32062776  T
Q  226 aca 228  Q
    |||    
T  32062777 aca 32062779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 45463082 - 45463192
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| |||| |||||||||||| |  || |||||||||   |||| ||| ||||||||||| ||||  || ||||||||| ||||||| |||||||||||    
T  45463082 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 45463181  T
Q  145 atcctttgacc 155  Q
     || |||||||    
T  45463182 gtcatttgacc 45463192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 33247651 - 33247558
Alignment:
Q  55 tccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcc 148  Q
    |||||||||||| ||||||||||||||||  || | ||| | ||||||||| ||||  || ||||||| |  |||||| |||||||||||||||    
T  33247651 tccttgcaattagggatcgtttaaaaatccgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatcc 33247558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 48529969 - 48529916
Alignment:
Q  58 ttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaa 111  Q
    ||||||||| ||||||||||||||| | || |||||||||||||||||| ||||    
T  48529969 ttgcaattagggatcgtttaaaaattgttcaccgtattcgctaatcctttcaaa 48529916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 53702159 - 53702082
Alignment:
Q  117 cttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| || |||||| ||||||||||| || ||||||| | | ||| | |||||||||| |||||||||||||||||    
T  53702159 cttgcaatcattaatcatttaaaatttcgtcatttgaccaacttaatcaatgccacgtcactaatttgatgacgtggc 53702082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 54435530 - 54435437
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcatt 124  Q
    ||||||||||||||||||||||| | |||||||||| |  |||||||||||| ||||   ||| |||  |||||||||||| || | |||||||    
T  54435530 ttttaggcttaaatatgtatttcgtgcttgcaattaggtgtcgtttaaaaattgatccatgtaatcgtcaatccttgcaaattagcattgcatt 54435437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 55866106 - 55866184
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaa 111  Q
    |||| |||||||||||||||||| ||| |||||||| || |||||||||||| | | |  |||||| ||||||||||||||    
T  55866106 tttttggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggttt--gtattcactaatccttgcaaa 55866184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 36009245 - 36009133
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaatta-tggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    |||||||||||||||||||| ||||||| |||||  || |||||||||||| | || | ||| ||| ||||||| | ||  || || |||||| ||||||    
T  36009245 ttaggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaat 36009146  T
Q  132 cgtttaaaatttc 144  Q
    | |||||||||||    
T  36009145 catttaaaatttc 36009133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 39667193 - 39667061
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| |||| |||||| ||||| || || ||||||||| | || | ||| ||| ||||||| | ||| || ||||||||| ||||||| |||||||||||    
T  39667193 atgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaaaatttc 39667094  T
Q  145 atcctttgacccagtcaatgactgccacgtcat 177  Q
     || ||||||| | | ||| || ||||||||||    
T  39667093 gtcttttgaccaacttaatcaccgccacgtcat 39667061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 5818121 - 5818082
Alignment:
Q  116 ccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  5818121 ccttgcattgtttaatcatttaaaatttcatcctttgacc 5818082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 9144857 - 9144924
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  9144857 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 9144924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 22567105 - 22567038
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  22567105 ttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtcaataatttgatgacgtggc 22567038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 32950448 - 32950381
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||| ||| |||||||||||||||||    
T  32950448 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacatcactaatttgatgacgtggc 32950381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 54713615 - 54713646
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaatta 66  Q
    ||||||||||||||||||||||||||||||||    
T  54713615 aggcttaaatatgtatttcatccttgcaatta 54713646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 11523958 - 11524068
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| |||| |||||||||||| |  || |||||||||   |||| ||| ||| ||||||| ||||  || ||||||||| ||||||| |||||||||||    
T  11523958 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcatttaaaatttc 11524057  T
Q  145 atcctttgacc 155  Q
     || |||||||    
T  11524058 gtcatttgacc 11524068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 27149361 - 27149303
Alignment:
Q  97 gctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||| ||||  || ||||||||| ||||||| ||||||||||| ||||||||||    
T  27149361 gctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacc 27149303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 39538134 - 39538188
Alignment:
Q  90 cgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    ||||||||||||| |||| ||| ||  |||||||||||||||| |||||||||||    
T  39538134 cgtattcgctaattcttgaaaattagtcttgcattctttaatcatttaaaatttc 39538188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 50503824 - 50503966
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||  |||| |||| |||| ||||||| | ||| ||||||||||  ||   ||| ||| ||||| | ||||  || ||||||||| ||||||| |    
T  50503824 aggcttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaatcagtccatgtaatcgttaatcttagcaatttacccttgcattgtttaatcat 50503923  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||| | |||||||||| | | ||| |||||||||||||    
T  50503924 ttaaaattccgtcctttgaccaacttaatcactgccacgtcat 50503966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 52573287 - 52573369
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| ||||  ||  ||| |||| ||||||| ||||||||||| |||||||||| | | ||| |||||||||||||    
T  52573287 tcgctaatcctggcaatttactcttacattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcat 52573369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 9400580 - 9400677
Alignment:
Q  97 gctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||||  || ||||||| |  |||||| ||||||||||  ||||| |||| | | ||| |||| ||||||| |||||||||||||||||    
T  9400580 gctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgtcacgtcactaatttgatgacgtggc 9400677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 10407889 - 10408006
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| |||||||||||  |||  || ||||||||| ||||||| ||    
T  10407889 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 10407988  T
Q  136 taaaatttcatcctttga 153  Q
    ||||||||| ||||||||    
T  10407989 taaaatttcgtcctttga 10408006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 27891664 - 27891725
Alignment:
Q  116 ccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||||||| ||||||||||| |||||||||| | | ||| |||| ||||||||    
T  27891664 ccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcat 27891725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 51859487 - 51859548
Alignment:
Q  116 ccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||||||| ||||||||||| |||||||||| | | ||| |||||||| ||||    
T  51859487 ccttgcattatttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcat 51859548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 3032641 - 3032701
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| || |||||||    
T  3032641 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgacc 3032701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 27069337 - 27069217
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| | ||||||||| ||||  || ||||||||| ||||||| |    
T  27069337 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcat 27069238  T
Q  135 ttaaaatttcatcctttgacc 155  Q
    |||||||||| || |||||||    
T  27069237 ttaaaatttcgtcttttgacc 27069217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 40387466 - 40387542
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaa 111  Q
    |||||| ||||||| |||||||| |||||||| ||  | ||||||||| | || | ||||||||||||||| |||||    
T  40387466 aggctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaa 40387542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 154
Target Start/End: Complemental strand, 50504253 - 50504133
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||  |||| |||| |||||| ||||| |  || |||||||||   |||| ||| ||| ||||||  ||||  || ||||||||| |||||||     
T  50504253 taggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatca 50504154  T
Q  134 tttaaaatttcatcctttgac 154  Q
    ||||||||||| |||||||||    
T  50504153 tttaaaatttcgtcctttgac 50504133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 54858923 - 54858867
Alignment:
Q  99 taatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||| ||||  || ||||||||| ||||||| ||||||||||| ||||||||||    
T  54858923 taatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacc 54858867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 27992133 - 27991978
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||| ||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| |||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 27992034  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  27992033 aatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 27991978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 32053142 - 32053301
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||| || |  ||| || |||||||||||||||| ||||||| || |||||| |    
T  32053142 aggcttaaatatgtatttcatccttgtaattatgggtcgtttaaaaatcggtccctatatacgataatccttgcaaactagccttgcaatcattaatcat 32053241  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||||| ||||||| | | ||| |||||||| ||| |||||||||||||||||    
T  32053242 ttaaaatttcatcttttgaccaacttaatcactgccacatcactaatttgatgacgtggc 32053301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 48788799 - 48788961
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||    
T  48788799 tttaggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaat 48788898  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | |||||||||||||| ||||||| | | ||| | || ||||||| ||||| |||||||||||    
T  48788899 catttaaaatttcatcatttgaccaacttaatcagtgtcacgtcactaattcgatgacgtggc 48788961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 13386180 - 13386017
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| ||||||||||||||||| || |||||||||| || |||||||||||| | || |  ||||||||||||||||||||||| ||||||| | |||||    
T  13386180 tttttggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatgtttaa 13386081  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || |||||||||| ||||||||||||||| ||| ||||||| |||| |||| |||||| |||||    
T  13386080 tcatttaaaattttatcctttgacccagttaatcactgccatgtcactaatctgatgaggtggc 13386017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 17102422 - 17102259
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||||| | ||   ||||||||||||||| |||||||| ||||||| || ||||    
T  17102422 ttttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcattaa 17102323  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||  |||||||||| | | ||| |||||||||||| |||||| ||||||||||    
T  17102322 tcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaattttatgacgtggc 17102259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 2640177 - 2640336
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||| | |  | ||||||||||||||||||||| ||  |||||| || |||||| |    
T  2640177 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgtattcgctaatccttgcaaattagtcttgcaatcattaatcat 2640276  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  2640277 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 2640336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 17885649 - 17885780
Alignment:
Q  57 cttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgaccc 156  Q
    |||||||||| || |||||||||||| | || | |||||| ||||||||||||||||| ||||||| || |||||| ||||||||||| |||||||||||    
T  17885649 cttgcaattaggggtcgtttaaaaattggtccctgtattctctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccc 17885748  T
Q  157 agtcaatgactgccacgtcattaatttgatga 188  Q
    ||| ||| |||||||||||| |||||||||||    
T  17885749 agttaatcactgccacgtcactaatttgatga 17885780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 28469009 - 28469167
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | ||    |||||||||||| |||||||||| ||||||| || |||||| |    
T  28469009 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatattcgctaatctttgcaaactagccttgcaatcattaatcat 28469108  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| |||||||||| | | ||| | |||| ||||| |||||||||||||||||    
T  28469109 ttaaaatttcgtcctttgaccaacttaatcattgcc-cgtcactaatttgatgacgtggc 28469167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 34 - 176
Target Start/End: Complemental strand, 17886920 - 17886778
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||   ||||||| |||||||||||||||| |||||||    ||||||     
T  17886920 taggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaatca 17886821  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtca 176  Q
    ||||||||||| ||| |||||||| | ||| ||||||||||||    
T  17886820 tttaaaatttcgtcccttgacccacttaatcactgccacgtca 17886778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 33808323 - 33808464
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||| |||| ||||| |  |||||||||||| | |||| ||||||||||||||||||||| ||  |||||||||||||||| ||    
T  33808323 ggcttaaatatgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatccttgcaaattagtcttgcattctttaatcatt 33808422  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||| |||||||||| |||  ||||| ||||||    
T  33808423 taaaatttcgtccattgacccagttaatcgctgccccgtcat 33808464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 42731849 - 42731689
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||| ||||| || |||||||||||| |||| |  ||| ||||||||||||||| ||| | ||||| |  ||||||     
T  42731849 taggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattgatccctatatccgctaatccttgcaagctagctttgcaattattaatca 42731750  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| |||||||||| | | ||| |||||||||||| |||||  ||||||||||    
T  42731749 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcaatgacgtggc 42731689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 42362450 - 42362573
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| | ||   ||||||| ||||||||||||| || ||||||||||||||||| ||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatcatt 42362549  T
Q  136 taaaatttcatcctttgacccagt 159  Q
    ||||||||| |||||| |||||||    
T  42362550 taaaatttcgtcctttaacccagt 42362573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 35 - 189
Target Start/End: Complemental strand, 6253869 - 6253715
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | ||   |||||||||||||||||||||| |  |||||| || |||||| |    
T  6253869 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaacaagtcttgcaatcattaatcat 6253770  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgac 189  Q
    |||||||||  |||||||||| | | ||| |||| ||||||| ||||||||||||    
T  6253769 ttaaaatttagtcctttgaccaacttaatcactgtcacgtcactaatttgatgac 6253715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 152
Target Start/End: Complemental strand, 10936223 - 10936106
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || | |||||||||| | ||   |||||||||||||||||||||||| ||||||| || |||||| |    
T  10936223 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcat 10936124  T
Q  135 ttaaaatttcatcctttg 152  Q
    |||||||||| |||||||    
T  10936123 ttaaaatttcgtcctttg 10936106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 42019598 - 42019755
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||||||||||||| || |||||||||||| | ||   |||||||||||||||||||||||| | ||| | || |||||| |||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagctttgtaatcattaatcattt 42019697  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||| | |||||||| | | ||| ||||| |||||| ||||| ||||| |||||    
T  42019698 aaaatttcgttctttgaccaaattaatcactgctacgtcactaattcgatgatgtggc 42019755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 24389214 - 24389094
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | ||   |||||||||||||||||||||||| | ||||| || |||||| |    
T  24389214 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcattgcaatcattaatcat 24389115  T
Q  135 ttaaaatttcatcctttgacc 155  Q
    |||||||||  ||||||||||    
T  24389114 ttaaaattttgtcctttgacc 24389094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 28469438 - 28469278
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| | || | ||| ||| ||||||| ||||  || ||||||||| |||||||     
T  28469438 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatca 28469339  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| ||| |   |||| | ||| ||| |||||||| |||||||||||||||||    
T  28469338 tttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtggc 28469278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 5457339 - 5457177
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||| | ||   ||||||| ||||||||||||| || |||| || | ||||||    
T  5457339 tttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaat 5457240  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | ||||||||||| ||| |   |||||| ||| |||||||||||| | ||| | |||||||||    
T  5457239 catttaaaatttcgtccctcatcccagttaatcactgccacgtcactgattagctgacgtggc 5457177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 24388816 - 24388977
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatc 132  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| | |||| ||||||||||||| | ||||  || ||||| ||| |||||||    
T  24388816 ttagacttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttacccttgtattgtttaatc 24388915  T
Q  133 gtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
      |||||||||| ||| |   |||| | ||| |||||||| |||  ||||||||||||||||    
T  24388916 acttaaaatttcgtccctctccccacttaatcactgccacatcaccaatttgatgacgtggc 24388977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 35 - 172
Target Start/End: Original strand, 27396628 - 27396765
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||| ||||| ||  ||||||||||| | ||   ||||||||||||||||||||||||  |||||| || |||||| |    
T  27396628 aggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggtccatgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 27396727  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    ||||||||||||| ||||||| | | ||| ||||||||    
T  27396728 ttaaaatttcatcatttgaccaacttaatcactgccac 27396765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 41 - 194
Target Start/End: Original strand, 40379774 - 40379927
Alignment:
Q  41 aaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaa 140  Q
    |||||||||||||||||||||||||| || |||||||||||| | |||  ||||||||||||||||||||  || | ||| ||| ||||||| |||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcatttaaaa 40379873  T
Q  141 tttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||| ||| |   |||| | ||| | |||||||||| |||||||||||||||||    
T  40379874 tttcgtccctctccccacttaatcaatgccacgtcactaatttgatgacgtggc 40379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 45011037 - 45010924
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| | |    ||||||||||||||||||||  || ||||||||| |||||    
T  45011037 ttttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaa 45010938  T
Q  131 tcgtttaaaatttc 144  Q
    || |||||||||||    
T  45010937 tcatttaaaatttc 45010924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 10935789 - 10935952
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||| ||||||||| ||||||||||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || ||||||||| |||||    
T  10935789 tttttggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaa 10935888  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||| ||| |    ||| | ||| ||||||| |||| |||||||||||||||||    
T  10935889 tcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtggc 10935952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 19204884 - 19204728
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    |||||||||| |||| |||||| |||||| || | |||||||||| | |    ||| |||||||||||||||||||| | ||||| || |||||  ||||    
T  19204884 cttaaatatgaatttgatccttacaattaggggtggtttaaaaattggttcatgtaatcgctaatccttgcaaactagctttgcaatcattaattattta 19204785  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| ||||||| | | ||| |||||||||||| |||||||||||||||||    
T  19204784 aaatttcatcatttgaccaatttaatcactgccacgtcactaatttgatgacgtggc 19204728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 40380112 - 40380004
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| | ||   |||||||| ||||||||||||||| ||||||| || |||||| ||    
T  40380112 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatcattaatcatt 40380013  T
Q  136 taaaatttc 144  Q
    |||||||||    
T  40380012 taaaatttc 40380004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 12229410 - 12229299
Alignment:
Q  126 tttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggctctggtaattggtcaacccacacgttaaatg 225  Q
    ||||||| || |||||||| ||| || ||||| | ||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |||| |||||    
T  12229410 tttaatcattaaaaatttcgtcccttaacccacttaatgactgccacgtcattaatttgatgacgtggctttgttaactggtcaacccatacgtgaaatg 12229311  T
Q  226 acaattttaccc 237  Q
    | | ||||||||    
T  12229310 atagttttaccc 12229299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 37657265 - 37657191
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaa 110  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||| ||||||||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccctgtattcgttaatccttgcaa 37657191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 27397028 - 27396867
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| | || | ||| |||||||||||  |||   | |  |||||| |||||    
T  27397028 ttttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaa 27396929  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    || ||||||||||| ||| |   |||| | ||| ||||||||||||  ||||||||||||||    
T  27396928 tcatttaaaatttcgtccctctccccacttaatcactgccacgtcaagaatttgatgacgtg 27396867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 3914560 - 3914408
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||    |||||||  | |||||||||| | | || | |||||||||||||||||||||||| ||||||| || |||||| |||    
T  3914560 gcttaaatatgtatttcat----gcaattagaggtcgtttaaaattgg-tccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 3914466  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| ||||||| | | ||| ||||||| |||| ||||| |||||| ||||    
T  3914465 aaaatttcatcatttgaccaacttaatcactgccatgtcactaattcgatgacatggc 3914408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 192
Target Start/End: Original strand, 42731419 - 42731575
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||| | ||   ||| ||||||||||| ||||  || || |||||| ||||||| ||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 42731518  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    ||||||||| ||| |   |||| | ||| ||||||| |||| |||||||||||||||    
T  42731519 taaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtg 42731575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 37656855 - 37657010
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| | ||||||||||||| | |||| ||| ||||||||||| ||||  ||  |||||||| |||| |  |||||    
T  37656855 ttaaatatgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaatttacgcttgcattgtttatttatttaa 37656954  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||| |   |||| | ||| || | ||||||| |||||||||||||||||    
T  37656955 aatttcgtccctctccccacttaatcaccggcacgtcactaatttgatgacgtggc 37657010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 33809472 - 33809374
Alignment:
Q  96 cgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||  ||||||| ||  ||| |||||||||||  |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| |||||    
T  33809472 cgctaatttttgcaaattagtcttacattctttaattatttaaaatttcatcctttgatccagttaatgactgacacgtcattaatttgatgatgtggc 33809374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 17102019 - 17102128
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || || |||||| ||||||| |    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcat 17102118  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  17102119 ttaaaatttc 17102128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 22871706 - 22871597
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || || ||||||||| | || | ||| | ||||||||||||||  || ||||||||| ||||||| |    
T  22871706 aggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatcat 22871607  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  22871606 ttaaaatttc 22871597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 27991738 - 27991847
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || ||||||| |||| |||| | ||| ||||||||||| ||||  || || |||||| ||||||| |    
T  27991738 aggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcat 27991837  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  27991838 ttaaaatttc 27991847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 47945356 - 47945465
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||| |||||||||||||||| ||||||||  ||||||||||||||| | |    |||||||||||||||||||||||| | ||||| || |||||| |    
T  47945356 aggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatcat 47945455  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  47945456 ttaaaatttc 47945465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 47950786 - 47950895
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||| |||||||||||||||| ||||||||  ||||||||||||||| | |    |||||||||||||||||||||||| | ||||| || |||||| |    
T  47950786 aggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatcat 47950885  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  47950886 ttaaaatttc 47950895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 6253472 - 6253579
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || || |||||| ||||||| |||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 6253571  T
Q  137 aaaatttc 144  Q
    ||||||||    
T  6253572 aaaatttc 6253579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 22871367 - 22871466
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||| |  |||||| |  |||||| ||||||||||| |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  22871367 tcgctaatccttgcaaaccagtcttgcaattattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgacgtggc 22871466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 32298776 - 32298855
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaacta 114  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||  | || | ||||||||||||||||||||||||    
T  32298776 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgtattcgctaatccttgcaaacta 32298855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 18087766 - 18087625
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||| ||||||| |||  |||||||||||| || || ||||||||| | || | ||| ||||||||||||||||| || ||||||| |  |||||| ||    
T  18087766 ggctttaatatgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatt 18087667  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||  ||| || ||||| | |||||||||||||||||    
T  18087666 taaaattttgtcccttaacccacttaatgactgccacgtcat 18087625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 32299138 - 32299025
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||| |||||||||||||||| ||||||||||||| |  |||||||||||| | || | ||| ||||||||||| ||||  || ||||||||| |||||    
T  32299138 ttttatgcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaa 32299039  T
Q  131 tcgtttaaaatttc 144  Q
    || || ||||||||    
T  32299038 tcattgaaaatttc 32299025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 6571012 - 6571120
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||| |||||||  |||  || ||||||||| ||||||| |    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcat 6571111  T
Q  135 ttaaaattt 143  Q
    |||||||||    
T  6571112 ttaaaattt 6571120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 47946901 - 47946785
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||| ||||||| ||||| | ||||||||||||||| |||| ||||||||||  |||| |||| ||  |||||| || |||||  |||    
T  47946901 gcttaaatatgtattttatccttgtaattaggaatcgtttaaaaatcggtctctgtattcgctatcccttccaaattagtcttgcaatcattaattattt 47946802  T
Q  137 aaaatttcatcctttga 153  Q
    |||||||| | ||||||    
T  47946801 aaaatttcgttctttga 47946785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 47952331 - 47952215
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||| ||||||| ||||| | ||||||||||||||| |||| ||||||||||  |||| |||| ||  |||||| || |||||  |||    
T  47952331 gcttaaatatgtattttatccttgtaattaggaatcgtttaaaaatcggtctctgtattcgctatcccttccaaattagtcttgcaatcattaattattt 47952232  T
Q  137 aaaatttcatcctttga 153  Q
    |||||||| | ||||||    
T  47952231 aaaatttcgttctttga 47952215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 28105498 - 28105577
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaac 112  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||   || | |||||| |||||||||| ||||    
T  28105498 ttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatttgtccctgtattcactaatccttgaaaac 28105577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 43123175 - 43123253
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaacta 114  Q
    |||||||||||||||||| ||| |||||||| || |||||||||||| | || | |||||| |||||||||||||||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaacta 43123253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 20426762 - 20426689
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatcct 105  Q
    |||||||||||||||||||||||||| ||||||||  | |||||||||||| | || | |||||||||||||||    
T  20426762 tttaggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcct 20426689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 23181421 - 23181264
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||||||| ||||||||| || ||||||||| || | ||   ||| ||||||||| | ||||  || ||||||||| ||||||| |||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 23181322  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||| ||| |    ||| | ||| |||| || |||| |||||||||||||||||    
T  23181321 aaaatttcgtccctctctccacttaatcactgtcatgtcactaatttgatgacgtggc 23181264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 19204488 - 19204596
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||| ||||| || |||||||||||| | || | ||| ||| |||| || ||||  || ||||||||| ||||||| |    
T  19204488 aggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatcat 19204587  T
Q  135 ttaaaattt 143  Q
    |||||||||    
T  19204588 ttaaaattt 19204596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 2640607 - 2640448
Alignment:
Q  36 ggcttaaat-atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||| |||||||||||||||  ||||| || |||||||||||| |  ||| ||| |||||||| || ||||  || ||||||||| ||||||| |    
T  2640607 ggcttaaattatgtatttcatccttataattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatcat 2640508  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| ||  |   |||| | ||| |||| || |||| |||||||||||||||||    
T  2640507 ttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 2640448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 18086287 - 18086430
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||| ||||||| |||  |||||||||||| |  |||||||||||| | || | |||  || ||||||||||||| || ||||||| |  ||||||     
T  18086287 taggctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagccttgcaattattaatca 18086386  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
     |||||||||| ||| |||||||||| ||| ||||||| |||||    
T  18086387 cttaaaatttcgtcccttgacccagttaattactgccatgtcat 18086430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 43124542 - 43124439
Alignment:
Q  74 tttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacg 173  Q
    ||||||||| | || | ||| |||||||||||| ||||||| ||||||||| ||||||| ||||||||||| ||| |   |||||| ||| |||||||||    
T  43124542 tttaaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccacg 43124443  T
Q  174 tcat 177  Q
    ||||    
T  43124442 tcat 43124439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 18670291 - 18670217
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaa 110  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||  | || | ||||||| ||||||||||||    
T  18670291 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 18670217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 32068522 - 32068381
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||  |||| |||| |||||||||||| |  || |||||||||  ||| | ||| |||||||||||  |||  || ||||||||| ||||||| ||    
T  32068522 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcatt 32068423  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| || ||||||| | | ||| |||||||||||||    
T  32068422 taaaatttcgtcatttgaccaacttaatcactgccacgtcat 32068381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 29141605 - 29141558
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||    
T  29141605 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaat 29141558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 30948251 - 30948318
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  30948251 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 30948318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 34928741 - 34928808
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  34928741 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 34928808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 39686625 - 39686692
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  39686625 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 39686692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 25628541 - 25628619
Alignment:
Q  99 taatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||| ||||  || ||||||||| ||||||| ||||||||||| |||||||||| | | ||| |||||||||||||    
T  25628541 taatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcat 25628619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 32934357 - 32934467
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| ||||||||||||||||| |  || |||||||||   || | ||| |||||||||||  |||  || ||||||||| ||||||| |||||||||||    
T  32934357 atgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 32934456  T
Q  145 atcctttgacc 155  Q
     ||||||||||    
T  32934457 gtcctttgacc 32934467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 42618278 - 42618196
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| |||||||||| | | ||| |||| ||||||||    
T  42618278 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcat 42618196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 13384501 - 13384610
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||| |||| || |||||||| |||||||| || ||| |||||| | | || | ||| ||||||||||| |||||||| |||||||  | |||||| |    
T  13384501 aggctttaataagtgtttcatccctgcaattaagggtcgcttaaaatttggtccctgtaatcgctaatcctagcaaactacccttgcaaacgttaatcat 13384600  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  13384601 ttaaaatttc 13384610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 22081971 - 22081866
Alignment:
Q  50 tttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcct 149  Q
    |||| ||||||||||||||  || |||||||||   | || ||| ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| || |    
T  22081971 tttcgtccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcat 22081872  T
Q  150 ttgacc 155  Q
    ||||||    
T  22081871 ttgacc 22081866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 29144413 - 29144364
Alignment:
Q  33 ttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    ||||||||||||||||||||| ||| |||||||| || ||||||||||||    
T  29144413 ttaggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaat 29144364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 20425476 - 20425524
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||||||||||||||| ||||||| |||||||| ||||| |||||||||    
T  20425476 taggcttaaatatgtaattcatccctgcaattagggatcatttaaaaat 20425524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 25628885 - 25628785
Alignment:
Q  55 tccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgac 154  Q
    ||||||||||||||  || |||||||||   |||  ||| |||||||||||  |||  || ||||||||| ||||||| ||||||||||| |||||||||    
T  25628885 tccttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgac 25628786  T
Q  155 c 155  Q
    |    
T  25628785 c 25628785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 33828405 - 33828281
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||  |||  |||| |||||||||||| |  || |||||||||   |||| ||| |||||||||||  |||  || ||||||||| |||||    
T  33828405 ttttaggcttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaa 33828306  T
Q  131 tcgtttaaaatttcatcctttgacc 155  Q
    || ||||||||||| || |||||||    
T  33828305 tcatttaaaatttcgtcatttgacc 33828281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 16804054 - 16803967
Alignment:
Q  55 tccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatt 142  Q
    |||||||||||| || |||||||||||| | || | ||| |||| |||||| ||||  || ||||||||| ||||||| |||||||||    
T  16804054 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgccaatcctagcaatttacccttgcattgtttaatcatttaaaatt 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 30127440 - 30127487
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||||||||||||||||  |||| |||||||| |||||||||||||||    
T  30127440 aggcttaaatatgtattcaatccctgcaattagggatcgtttaaaaat 30127487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 32680686 - 32680753
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  32680686 ttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggc 32680753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 37657187 - 37657120
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| ||||||||||| |||||||||| | | ||| |||| ||||||  |||||||||||||||||    
T  37657187 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgacacgtcgctaatttgatgacgtggc 37657120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 42020022 - 42019979
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||||||||||||||||||||||||||| || | ||||||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaat 42019979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 43266261 - 43266407
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||  |||| |||| |||||||||||| |  || |||||||||   ||   ||| ||| |||||||  |||  || ||||||||| |||||    
T  43266261 ttttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaa 43266360  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    || |||||||||||||| ||||||| | | ||| |||| ||||||||    
T  43266361 tcatttaaaatttcatcatttgaccaacttaatcactgtcacgtcat 43266407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 6571313 - 6571240
Alignment:
Q  99 taatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    |||| ||||||||||| ||||||| |  |||||| ||||||||||| |||||||||| | | ||| ||||||||    
T  6571313 taattcttgcaaactagccttgcaattattaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 6571240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 25453187 - 25453247
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    |||||||||||  |||  || ||||||||| ||||||| ||||||||||| ||||||||||    
T  25453187 tcgctaatcctgacaatttacccttgcattatttaatcatttaaaatttcgtcctttgacc 25453247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 25453495 - 25453435
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||| ||||| ||||||||||    
T  25453495 tcgctaatcctagcaatttacccttgcattgtttaatcatttaacatttcgtcctttgacc 25453435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 32068155 - 32068215
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| | ||||||||    
T  32068155 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtactttgacc 32068215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 46205672 - 46205616
Alignment:
Q  99 taatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    |||||||  |||| || ||||||||| ||||||| ||||||||||| ||||||||||    
T  46205672 taatcctgacaaattacccttgcattgtttaatcatttaaaatttcgtcctttgacc 46205616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 194
Target Start/End: Original strand, 23457988 - 23458137
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||||||||||||||||||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| |  |||||| |||||||||||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttc 23458087  T
Q  145 atcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
     |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  23458088 gtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 23458137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 19740921 - 19741081
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| || | |||||||| ||||||||||||||| | || | ||| |||||||||||||||||||| ||||||| || ||||||     
T  19740921 taggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatca 19741020  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| |||||||||| | | ||| | |||||||||| |||||||||||||||||    
T  19741021 tttaaaatttcgtcctttgaccaatttaatcattgccacgtcactaatttgatgacgtggc 19741081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 23458411 - 23458251
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||| ||| ||||||||||||||||  || ||||||||| ||||||    
T  23458411 tttaggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaat 23458312  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    | ||||||||||| ||| |   |||| | ||| |||||||| ||| |||||||||||||||    
T  23458311 catttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtg 23458251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 46475205 - 46475051
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    ||||||||||||||||||||| |||||| || |||||||||||| |||  | |||||||||||||||||||||||| ||||||| || |||||| |||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaattgata-ctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 46475107  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| |||||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  46475106 aatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 46475051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 36418116 - 36417958
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||| ||||| || |||||||||||| | |  | |||||||||||||||||||||||| ||||||| || |||||| ||    
T  36418116 ggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 36418017  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| |||||||||  | | ||| |||||||||||| ||||| |||||||||||    
T  36418016 taaaatttcgtcctttgacaaacttaatcactgccacgtcactaattcgatgacgtggc 36417958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 43384709 - 43384553
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttta 137  Q
    ||||||||||||||||||||||||||||| | |||||||||||||   ||||  |||||| |||||||||||||||| ||||||| || ||| || ||||    
T  43384709 cttaaatatgtatttcatccttgcaattaggaatcgtttaaaaatttgtctctatattcgttaatccttgcaaactagccttgcaatcattagtcattta 43384610  T
Q  138 aaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||| |||||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  43384609 aaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggc 43384553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 33689381 - 33689537
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | ||   |||||||||||| ||||||||||| ||||||| || |||||| |    
T  33689381 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcat-gtattcgctaattcttgcaaactagccttgcaatcattaatcat 33689479  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||||  |||||||||| | | ||| |||||||||||| ||||| |||||||||    
T  33689480 ttaaaattttgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtg 33689537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 40758542 - 40758402
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||| | |||  ||||||||||||||||||||||||  |||||| || |||||    
T  40758542 tttaggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaat 40758443  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccac 172  Q
    | ||||||||||| |||||||||| | | ||| ||||||||    
T  40758442 catttaaaatttcgtcctttgaccaacttaatcactgccac 40758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 9367739 - 9367899
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| |||| | |||||| || |||||||||||  | |||| |||||||||||||||||||||||| ||||||| |  ||||||     
T  9367739 taggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaatca 9367838  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||||| ||| |   |||| | ||| |||||||||||| ||||||||||| |||||    
T  9367839 tttaaaatttcgtccctcatcccaattaatcactgccacgtcactaatttgatgaggtggc 9367899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 53757150 - 53756995
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    ||||||||||||||||||| ||||||||||    |||||||||||| | ||   |||||||||||||||||||||||||||||||| || |||||| |||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcattt 53757051  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||| |||||| ||| | | ||| ||| || ||||| ||||| |||||||||    
T  53757050 aaaatttcgtcctttaaccaacttaatcactaccgcgtcactaattcgatgacgtg 53756995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 26463635 - 26463751
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||||   ||||||| ||||||||||||| ||  |||||| || |||||| |||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatccttgcaaattagtcttgcaatcattaatcatttaa 26463734  T
Q  139 aatttcatcctttgacc 155  Q
    |||||| ||||||||||    
T  26463735 aatttcgtcctttgacc 26463751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 36417691 - 36417806
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    ||||| |||| ||||||||||| ||||| || |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| |||||    
T  36417691 ttaaacatgtctttcatccttgtaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 36417790  T
Q  139 aatttcatcctttgac 154  Q
    |||||| |||||||||    
T  36417791 aatttcgtcctttgac 36417806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 9294386 - 9294228
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| | || |  || ||||||||||| ||||  || ||||||||| ||||||| ||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatt 9294287  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||| |   |||| | ||| |||| || |||| |||||||||||||||||    
T  9294286 taaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 9294228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 33689811 - 33689649
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||||| | |    ||| ||||||||||| ||||  || ||||||||| ||||||    
T  33689811 tttaggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaat 33689712  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    | ||||||||||| ||| |   |||| | ||| |||||||||||| ||||| |||||||||||    
T  33689711 catttaaaatttcgtccctctccccacttaatcactgccacgtcactaattcgatgacgtggc 33689649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 41558003 - 41558116
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||| | |    ||||||||||||||||||| | |||||||||| |  ||||    
T  41558003 ttttaggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatccttgcacattaaccttgcaattattaa 41558102  T
Q  131 tcgtttaaaatttc 144  Q
    || |||||||||||    
T  41558103 tcatttaaaatttc 41558116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 42855678 - 42855615
Alignment:
Q  91 gtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgac 154  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  42855678 gtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttcatcctttgac 42855615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 41558306 - 41558169
Alignment:
Q  40 taaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaa 139  Q
    |||||||||||||||||| |||||||| || ||||||||||||  |||   ||||||||||||||||||||| ||  |||||| || |||||| ||||||    
T  41558306 taaatatgtatttcatccctgcaattaggggtcgtttaaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaa 41558207  T
Q  140 atttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||| |||||   |||||| ||| |||||||| ||||    
T  41558206 atttcgtccttgagcccagttaattactgccacatcat 41558169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 3850555 - 3850447
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||||| |||||||| || |||||||||||| | || | ||||||| ||||||||| |||||| |  |||| || |||||||||    
T  3850555 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgataatccttggaaactagctctgcaatcattaatcgtt 3850456  T
Q  136 taaaatttc 144  Q
    |||||||||    
T  3850455 taaaatttc 3850447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 42343156 - 42343040
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||||||| ||||| || |||||||||||| ||||   ||||||||||||| ||||||| ||  |||||| |  |||||| |||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgtattcgctaatctttgcaaattagtcttgcaatgattaatcatttaa 42343057  T
Q  139 aatttcatcctttgacc 155  Q
    |||||| ||||||||||    
T  42343056 aatttcgtcctttgacc 42343040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 2796177 - 2796287
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || || ||||||||| | || | ||| ||||||||||| ||||  || ||||||||| |||||||     
T  2796177 taggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 2796276  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  2796277 tttaaaatttc 2796287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 40033886 - 40033777
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| | | ||  || | ||||||||| ||||  || ||||||||| |||||||     
T  40033886 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatca 40033787  T
Q  134 tttaaaattt 143  Q
    ||||||||||    
T  40033786 tttaaaattt 40033777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 3849030 - 3849145
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||||||| | ||||||| |||||||| |  |||||||||||| | || | ||||||| |||||||||||||||| || |||| || |||||| |    
T  3849030 aggcttaaatatgaaattcatccctgcaattaggagtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccctgcaatcattaatcat 3849129  T
Q  135 ttaaaatttcatcctt 150  Q
    |||||||||| |||||    
T  3849130 ttaaaatttcgtcctt 3849145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 40758147 - 40758302
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| | ||   ||| |||||||||| |||||  || ||  ||||| ||||||| ||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcc-tgcaatttaccc--gcattgtttaatcatt 40758243  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||| |   |||| | ||| ||| |||||||| |||||||||||||||||    
T  40758244 taaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtggc 40758302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 19741321 - 19741212
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||| | ||||  || ||||| ||| ||||||| |    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcat 19741222  T
Q  135 ttaaaatttc 144  Q
    ||||||||||    
T  19741221 ttaaaatttc 19741212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 35712045 - 35712118
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaa 110  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||| | ||   ||||||||||||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggtccatgtattcgctaatccttgcaa 35712118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 46474818 - 46474922
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||| ||||||||| || |||||||||||| | |||| ||| ||||||||| | ||||  || | ||||||| ||||||| |||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatcatttaa 46474917  T
Q  139 aattt 143  Q
    |||||    
T  46474918 aattt 46474922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 9368723 - 9368588
Alignment:
Q  42 aatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaat 141  Q
    |||||||||||| |||||||||||| || |||||||||||| | || | ||| ||  ||||||||||||| ||  ||| |||| ||||||| ||||||||    
T  9368723 aatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatttaaaat 9368624  T
Q  142 ttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||| | | || ||||| | ||||| |||||||||||    
T  9368623 ttcgttccttaacccacttaatgattgccacgtcat 9368588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 40033526 - 40033593
Alignment:
Q  43 atatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaa 110  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||   ||||||||||||||||||||    
T  40033526 atatatatttcatccttgcaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaa 40033593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 43384282 - 43384441
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||| ||||||||||| |||| ||||||||| ||||| ||||||||| | || | ||| |||||||||||  |||  || ||||||||| ||||||| |    
T  43384282 aggctgaaatatgtattccatctttgcaattacggatcctttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 43384381  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||| ||  |   |||| | ||| |||| || |||| |||||||||||||||||    
T  43384382 ttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 43384441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 51994313 - 51994206
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| | ||   ||| |||||||| || ||||  || || |||||| ||||||| |||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcattt 51994214  T
Q  137 aaaatttc 144  Q
    ||||||||    
T  51994213 aaaatttc 51994206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 177
Target Start/End: Complemental strand, 37778700 - 37778558
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| | ||||||||| ||||  || ||||||||| ||||||| |    
T  37778700 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcat 37778601  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||||||||||||| | | ||| |||||||||||||    
T  37778600 ttaaaatttcatcctttgaccaacttaatcactgccacgtcat 37778558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 42342789 - 42342899
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||| | ||   ||| | |||| |||| ||||  || ||||||||| |||||||     
T  42342789 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattgtttaatca 42342888  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  42342889 tttaaaatttc 42342899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 9292245 - 9292289
Alignment:
Q  38 cttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaattagggatcgtttaaaaat 9292289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 26464015 - 26463968
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  26464015 aggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaat 26463968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 55052295 - 55052437
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||| ||||||  ||||| || |||| ||||||| | |||| ||||||||||||||||||||             || |||||| |||||    
T  55052295 ttaaatatgtatttgatccttataattaggggtcgtctaaaaattggtctctgtattcgctaatccttgcaa-------------tcattaatcatttaa 55052381  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  55052382 aatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 55052437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 177
Target Start/End: Complemental strand, 40788847 - 40788705
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    ||||||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| ||||||||||| ||||  ||  |||||||| ||||||| |    
T  40788847 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatctt 40788748  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||| |||||||||| | | ||| |||||||||||||    
T  40788747 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcat 40788705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 4323621 - 4323489
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| ||||| || |||||||| |  ||||||||||||   || | ||| ||||||||||| ||||| |||||||||||| ||||||| ||||||| |||    
T  4323621 atgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattc 4323522  T
Q  145 atcctttgacccagtcaatgactgccacgtcat 177  Q
     ||  |  ||||| | |||||||||||||||||    
T  4323521 gtcactgaacccacttaatgactgccacgtcat 4323489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 11910694 - 11910818
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||| |||||  |||| |||| ||||||||||||    || |||||||||  ||| | ||| ||||||||||| ||||  || ||||||||| |||||    
T  11910694 ttttagtcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaa 11910793  T
Q  131 tcgtttaaaatttcatcctttgacc 155  Q
    || ||||||||||| ||||||||||    
T  11910794 tcatttaaaatttcgtcctttgacc 11910818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 13948775 - 13948899
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||  |||| |||| |||||||||||| | ||| |||||||||   ||   ||| ||||||||| | ||||  || ||||||||| |||||    
T  13948775 ttttaggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaa 13948874  T
Q  131 tcgtttaaaatttcatcctttgacc 155  Q
    || ||||||||||| ||||||||||    
T  13948875 tcatttaaaatttcgtcctttgacc 13948899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 29118955 - 29118823
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| |||| |||||||||||| |  || |||||||||   || | ||| ||||||||||| ||||  || | ||||||| ||||||| |||||||||||    
T  29118955 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatcatttaaaatttc 29118856  T
Q  145 atcctttgacccagtcaatgactgccacgtcat 177  Q
     |||||||||| | | ||| |||||||||||||    
T  29118855 gtcctttgaccaacttaatcactgccacgtcat 29118823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 51993962 - 51994034
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatcctt 106  Q
    ||||||||||||||||||| ||| |||||||||  | |||||||||||| | || | ||||||||||||||||    
T  51993962 taggcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctt 51994034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 36150530 - 36150573
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaat 36150573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 54466729 - 54466662
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  54466729 ttaatcgtttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 54466662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 1079651 - 1079541
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||| ||||||| |||||||| |||||||| || || ||||||||| | || | ||| ||| ||||||| ||||| || |||||||   |||||||     
T  1079651 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatct 1079552  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  1079551 tttaaaatttc 1079541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 9294013 - 9294103
Alignment:
Q  91 gtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaat 181  Q
    ||||||||||||||||||||||||| |||  | || |||||| ||||||||||  || ||||||| | | ||| |||||||||||| ||||    
T  9294013 gtattcgctaatccttgcaaactaatcttataatcattaatcatttaaaattttgtcttttgaccaacttaatcactgccacgtcactaat 9294103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 34142646 - 34142600
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaat 82  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaat 34142600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 41988582 - 41988692
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||| ||||||||||||||| |||||  || || || || ||||||||| | || | |||||| ||||| |||||||| ||  ||||||||||||||||     
T  41988582 taggtttaaatatgtatttcctccttataaataagggtcatttaaaaattggtccctgtattcactaattcttgcaaattactcttgcattctttaatca 41988681  T
Q  134 tttaaaatttc 144  Q
    |||||| ||||    
T  41988682 tttaaattttc 41988692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 41989613 - 41989575
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtt 75  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  41989613 gcttaaatatgtatttcatccttgcaattagggatcgtt 41989575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 47551552 - 47551634
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||| || ||||  || ||||||||| ||||||| |||||||||||||||||||||| | | ||| |||||||| ||||    
T  47551552 tcgctaatactggcaatttacccttgcattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgccacatcat 47551634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 52032197 - 52032279
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| |||||||||| | | ||| ||| |||||||||    
T  52032197 tcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcat 52032279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 10307751 - 10307682
Alignment:
Q  86 tctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    |||| ||| ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| ||||||||||    
T  10307751 tctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacc 10307682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 36314359 - 36314456
Alignment:
Q  97 gctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||||  || ||||||| |  |||||| ||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  36314359 gctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggc 36314456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 48322438 - 48322535
Alignment:
Q  97 gctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||||  || ||||||| |  |||||| ||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  48322438 gctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggc 48322535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 53756747 - 53756852
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||||||| ||||||||| || |||||||||||| |||    ||| ||| ||||| | | ||  || ||||||||| ||||||| |||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgcattgtttaatcatttaa 53756846  T
Q  139 aatttc 144  Q
    ||||||    
T  53756847 aatttc 53756852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 53856486 - 53856381
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| |||| ||||| || || ||| |||||||| | ||   |||||| ||||||||||||||| |||| |||| |  |||||| |    
T  53856486 aggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtccttgtattcactaatccttgcaaacaaaccctgcaattattaatcat 53856387  T
Q  135 ttaaaa 140  Q
    ||||||    
T  53856386 ttaaaa 53856381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 21783403 - 21783476
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaacta 114  Q
    |||||||||||||||||||||| ||||| || ||||||  |||| | |  | ||||||||||||||||||||||||    
T  21783403 ttaaatatgtatttcatccttgtaattaagggtcgttt--aaattggttcctgtattcgctaatccttgcaaacta 21783476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 29685950 - 29686082
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    ||||||||| |||||||||||| |  || |||||||||   || | ||| |||||||||||  |||  || ||||||||| ||||||| |||||||||||    
T  29685950 atgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgcattgtttaatcatttaaaatttc 29686049  T
Q  145 atcctttgacccagtcaatgactgccacgtcat 177  Q
     | |||||||| | |  || |||||||||||||    
T  29686050 gttctttgaccaacttgatcactgccacgtcat 29686082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 44961330 - 44961266
Alignment:
Q  177 ttaatttgatgacgtggctctggtaattggtcaacccacacgttaaatgacaattttacccctat 241  Q
    ||||||||||||  |||||| | |||||| ||||||||||  | |||||||||||||||||||||    
T  44961330 ttaatttgatgatatggctccgttaattgatcaacccacatataaaatgacaattttacccctat 44961266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 52032506 - 52032446
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| ||||||||||    
T  52032506 tcgctaatcctggcaatatacccttgcattgtttaatcatttaaaatttcttcctttgacc 52032446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 3469262 - 3469341
Alignment:
Q  98 ctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||| ||||  || ||||||||| ||||||| ||||||||||| |||||||||| | | ||| || ||||||||||    
T  3469262 ctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcacggccacgtcat 3469341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 8041922 - 8041855
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||||||  ||||| || | | | ||| |||||||||||| |||||||||||||||||    
T  8041922 ttaatcgtttaaaatttggtccttggaacaaattaatcactgccacgtcactaatttgatgacgtggc 8041855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 35643865 - 35643992
Alignment:
Q  50 tttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcct 149  Q
    |||| |||||||||||| |  || |||||||||   || | ||| ||||||||||| ||||  || || |||||| ||||||| ||||||||||| ||||    
T  35643865 tttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgcattgtttaatcatttaaaatttcgtcct 35643964  T
Q  150 ttgacccagtcaatgactgccacgtcat 177  Q
    |||||  | | ||| |||||||||||||    
T  35643965 ttgacaaacttaatcactgccacgtcat 35643992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 23272819 - 23272893
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatcct 105  Q
    |||||||||| ||||||| |||||||| |||||||| ||||  ||||||||| | | || ||| |||||||||||    
T  23272819 ttttaggctttaatatgtctttcatccctgcaattagggattatttaaaaattggtatctgtaatcgctaatcct 23272893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 32431614 - 32431472
Alignment:
Q  42 aatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaat 141  Q
    |||||||||||| ||| || ||||| || || ||||||||| | || | | | ||| |||||||  |||| || |||||||   ||||| | ||||||||    
T  32431614 aatatgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaaaat 32431515  T
Q  142 ttcatcctttgacccagtcaatgactgccacgtcattaatttg 184  Q
    ||| ||| |||||||  | ||||| ||||||||||||||||||    
T  32431514 ttcgtcccttgacccgcttaatgattgccacgtcattaatttg 32431472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 69
Target Start/End: Complemental strand, 40506213 - 40506183
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatgg 69  Q
    |||||||||||||||||||||||||||||||    
T  40506213 ttaaatatgtatttcatccttgcaattatgg 40506183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 43608896 - 43608802
Alignment:
Q  50 tttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| ||| |||||||| ||||| ||||||||| | |||| ||| ||| ||||||| | ||| ||||||||||   ||||||| |||||||||||    
T  43608896 tttcgtccctgcaattagggatcatttaaaaattggtctctgtaatcgttaatcctcgtaaattaaccttgcaaagtttaatcatttaaaatttc 43608802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 10770551 - 10770648
Alignment:
Q  97 gctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| ||||  || ||||||| |  |||||| ||||||||||  ||||| |||| | | ||| |||||||| ||| |||||||||||||||||    
T  10770551 gctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgccacatcactaatttgatgacgtggc 10770648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 25108522 - 25108365
Alignment:
Q  37 gcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgttt 136  Q
    |||| ||||||| |||||||| |||||||| || || ||||||| | | || | ||| | ||||||||| |||||||  || ||||  | |||||| |||    
T  25108522 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgctaatcctggcaaactgtccctgcaaacgttaatcattt 25108423  T
Q  137 aaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||| |||||   | |||| ||| |||||||||||| | ||| | |||||||||    
T  25108422 aaaatttcgtccttcatcacagttaatcactgccacgtcactgattagctgacgtggc 25108365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 32306504 - 32306565
Alignment:
Q  116 ccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| ||||||| ||||||||||| |||||||||| | | ||| ||| |||||||||    
T  32306504 ccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcat 32306565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 3469567 - 3469507
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||| | ||||||||||    
T  3469567 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattccgtcctttgacc 3469507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 25107212 - 25107288
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaa 111  Q
    |||||||| ||||| |||||||| |||||||| || || ||||||||| | ||||  || ||||||||||| |||||    
T  25107212 aggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaa 25107288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 32306791 - 32306731
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacc 155  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| || |||||||    
T  32306791 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgacc 32306731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 14424 - 14587
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||||||||||||||||||||||| ||||||||| |  ||||||||||||   |||   ||||||||||||||||||||||| ||||||| || ||||    
T  14424 ttttaggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaattagtctatttattcgctaatccttgcaaactagccttgcaatcattaa 14523  T
Q  131 tcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    || ||||||||||  || ||||||| | | ||| |||||||||||| |||||||||||||||||    
T  14524 tcatttaaaattttgtcttttgaccaacttaatcactgccacgtcactaatttgatgacgtggc 14587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 14818 - 14744
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaa 110  Q
    |||||||||||| |||||||||||||||||| || |||||||||||| | ||||  || ||||||||||| ||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggtctctctaatcgctaatcctggcaa 14744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 6508 - 6388
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| | || | ||||||||||||||||||||| || ||||||| || |||||| |    
T  6508 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcat 6409  T
Q  135 ttaaaatttcatcctttgacc 155  Q
    |||||||||| ||||||||||    
T  6408 ttaaaatttcgtcctttgacc 6388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 69393 - 69235
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    |||||||||||||||||||||||||||||||    |||||||||||| | || | |||||||||||||||||||||||| ||||||| || |||||| ||    
T  69393 ggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 69294  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| |||||| ||| | | ||| |||||||||| | ||||  |||||||||||    
T  69293 taaaatttcgtcctttaaccaacttaatcactgccacgttactaatacgatgacgtggc 69235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 191
Target Start/End: Original strand, 68965 - 69120
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||||||||||||||||||||||| || || ||||||||| | || | ||| || |||||||| ||||  || ||||||||| ||||||| ||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatt 69064  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgt 191  Q
    ||||||||| ||| |   |||| | ||| |||||||||||| ||||||||||||||    
T  69065 taaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgt 69120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 4960 - 5103
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||||||||||||||||| | |||||| || |||||||||||| |||| |  ||||||||||||||||||||||| ||||||| |  ||||||     
T  4960 taggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaatca 5059  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| |||||||||| | | |||  ||||||||||||    
T  5060 tttaaaatttcgtcctttgacctaattaatcgctgccacgtcat 5103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 6343 - 6265
Alignment:
Q  99 taatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||||| || ||||||| | ||||||| ||||||||||| | | || ||||| | |||||||||||||||||    
T  6343 taatccttgcaaattacccttgcaatgtttaatcatttaaaatttcgttccttaacccacttaatgactgccacgtcat 6265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 140066 - 139911
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    |||||||||||||| ||||||||||||| || | |||||||||| | || | |||||| ||||| ||||||||||| ||||||| || |||||  |||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggttgtttaaaaattggtccctgtattcactaattcttgcaaactagccttgcaatcattaattatttaa 139967  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||  |||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  139966 aatttagtcctttgaccaacttaataactgccacgtcactaatttgatgacgtggc 139911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 139668 - 139780
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    |||||| |||||||||||||| ||||||||||||| || |||||||||||| | || | ||| ||||||||||| ||||  || || || |||  |||||    
T  139668 tttaggattaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatgaattgattaat 139767  T
Q  132 cgtttaaaatttc 144  Q
    | |||||||||||    
T  139768 catttaaaatttc 139780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 37564 - 37721
Alignment:
Q  36 ggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtt 135  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||| | ||   |||||||||||| || ||||||||  |||||| || |||||| ||    
T  37564 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcatt 37663  T
Q  136 taaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||||||||| |||||||||| | | ||| |||||||| ||| ||||||| |||||||||    
T  37664 taaaatttcgtcctttgaccaacttaatcactgccacatcactaatttg-tgacgtggc 37721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 37997 - 37833
Alignment:
Q  30 gttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattcttta 129  Q
    |||| |||||||||||||||||||||||||||||||| |  |||||||||||| | |||  ||| |||||||||||  |||  || ||||| ||| ||||    
T  37997 gtttaaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgttta 37898  T
Q  130 atcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    ||| ||||||||||| ||| |   |||| | ||| |||||||||||| |||||||||||||||||    
T  37897 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 37833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 2170 - 2008
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgt 134  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| | || | | | | ||||||| |||||||||| ||||||| || |||||| |    
T  2170 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgaaattgctaatctttgcaaactatccttgcaatcattaatcat 2071  T
Q  135 ttaaaatttcatcctttgacccagtcaatgactgcc---acgtcattaatttgatgacgtggc 194  Q
    |||||||||| | |||||||| | | ||| ||||||   |||||| |||||||||||||||||    
T  2070 ttaaaatttcgttctttgaccaatttaatcactgccacgacgtcactaatttgatgacgtggc 2008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 1767 - 1877
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    ||||||||||||||||||| ||||||||||||| || ||||| |||||| | || | ||| ||||||||| | ||||  || ||||||||| |||||||     
T  1767 taggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatca 1866  T
Q  134 tttaaaatttc 144  Q
    |||||||||||    
T  1867 tttaaaatttc 1877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 19860 - 19998
Alignment:
Q  39 ttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaa 138  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| | || | ||  ||||||||||||||||| || | ||||||||||||||| |||||    
T  19860 ttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattctttaatcatttaa 19959  T
Q  139 aatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||| | | || ||| | | |||||||| ||||||||    
T  19960 aatttcgttcattaacctaattaatgactgtcacgtcat 19998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 12197 - 12065
Alignment:
Q  45 atgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttc 144  Q
    |||| |||| ||||||||||||    || |||||||||  ||| | ||| ||||||||||| ||||  || ||||||||| ||||||| |||||||||||    
T  12197 atgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 12098  T
Q  145 atcctttgacccagtcaatgactgccacgtcat 177  Q
     |||||||||| | | ||| |||||||||||||    
T  12097 gtcctttgaccaacttaatcactgccacgtcat 12065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 2558 - 2484
Alignment:
Q  35 aggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaa 110  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||||| | ||| ||||||  |||||||||||||    
T  2558 aggcttaaatatgtatttcattcttgcaattagggatcgttttaaaattggtct-cgtatttactaatccttgcaa 2484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 2480 - 2413
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||| |||||||||||  ||||||||| | | ||| |||||||| ||| |||||||||||||||||    
T  2480 ttaatcatttaaaatttcgccctttgaccaacttaatcactgccacatcactaatttgatgacgtggc 2413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 915 - 1039
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    ||||||||||||  |||| |||| |||||||||||| | ||| |||||||||   ||   ||| ||||||||| | ||||  || ||||||||| |||||    
T  915 ttttaggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaa 1014  T
Q  131 tcgtttaaaatttcatcctttgacc 155  Q
    || ||||||||||| ||||||||||    
T  1015 tcatttaaaatttcgtcctttgacc 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 2388 - 2512
Alignment:
Q  31 ttttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaa 130  Q
    |||||| |||||  |||| |||| ||||||||||||    || |||||||||  ||| | ||| ||||||||||| ||||  || ||||||||| |||||    
T  2388 ttttagtcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaa 2487  T
Q  131 tcgtttaaaatttcatcctttgacc 155  Q
    || ||||||||||| ||||||||||    
T  2488 tcatttaaaatttcgtcctttgacc 2512  T

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Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 11568 - 11425
Alignment:
Q  34 taggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaatcg 133  Q
    |||||||||  |||| ||||||||||||||||| |  || |||||||||   ||   ||| ||| ||||||| ||||  || ||||||||| |||||||     
T  11568 taggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatca 11469  T
Q  134 tttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||||| || ||||||| | | ||| |||||||||||||    
T  11468 tttaaaatttcgtcttttgaccaacttaatcactgccacgtcat 11425  T

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Target: scaffold0328; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 11199 - 11281
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    ||||||||| | ||||  || ||||||||| ||||||| ||||||||||| |||||||||| | | ||| ||||||| |||||    
T  11199 tcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcat 11281  T

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Target: scaffold0388 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 177
Target Start/End: Complemental strand, 12669 - 12524
Alignment:
Q  32 tttaggcttaaatatgtatttcatccttgcaattatggatcgtttaaaaatcgatctccgtattcgctaatccttgcaaactaaccttgcattctttaat 131  Q
    |||||| ||||  |||| |||| |||||||||||| |  || |||||||||   || | ||| ||| ||||||| ||||  || ||||||||| ||||||    
T  12669 tttaggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaat 12570  T
Q  132 cgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    | ||||||||||| | |||||||| | | ||| |||||||||||||    
T  12569 catttaaaatttcgttctttgacctacttaatcactgccacgtcat 12524  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 141685 - 141750
Alignment:
Q  127 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtg 192  Q
    |||||||||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||    
T  141685 ttaatcgtttaaaatttagtccttggaccaaattaatcactgccacgtcactaatttgatgacgtg 141750  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 221849 - 221908
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgac 154  Q
    ||||||||||| ||||  || ||||||||| ||||||| ||||||||||| |||||||||    
T  221849 tcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgac 221908  T

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Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 222156 - 222074
Alignment:
Q  95 tcgctaatccttgcaaactaaccttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcat 177  Q
    |||||||||||  |||  || ||||||||| ||||||| ||||||||||| |||||||||| | | ||| ||||||| |||||    
T  222156 tcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcat 222074  T

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Target: scaffold0220 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 23360 - 23406
Alignment:
Q  165 actgccacgtcattaatttgatgacgtggctctggtaattggtcaac 211  Q
    |||||||||||| ||||||| ||||||||||||| ||||||| ||||    
T  23360 actgccacgtcagtaatttgctgacgtggctctgttaattggccaac 23406  T

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Target: scaffold0559 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 1540 - 1472
Alignment:
Q  127 ttaatcgtttaaaa-tttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 194  Q
    |||||||||||||| |||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  1540 ttaatcgtttaaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 1472  T

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