View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18215_high_10 (Length: 334)

Name: NF18215_high_10
Description: NF18215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18215_high_10
NF18215_high_10
[»] scaffold0115 (1 HSPs)
scaffold0115 (16-318)||(41772-42074)
[»] chr6 (8 HSPs)
chr6 (250-318)||(24216665-24216733)
chr6 (254-314)||(14796277-14796337)
chr6 (250-304)||(6777313-6777367)
chr6 (250-319)||(23295569-23295639)
chr6 (250-294)||(14352204-14352248)
chr6 (250-318)||(17907738-17907806)
chr6 (250-319)||(1559737-1559806)
chr6 (248-294)||(16166147-16166193)
[»] chr3 (5 HSPs)
chr3 (250-319)||(19636931-19637001)
chr3 (251-319)||(15956344-15956413)
chr3 (250-319)||(40355605-40355673)
chr3 (253-319)||(19707264-19707330)
chr3 (250-319)||(12800848-12800918)
[»] chr8 (4 HSPs)
chr8 (250-319)||(16227526-16227596)
chr8 (254-319)||(25261198-25261263)
chr8 (250-294)||(24555162-24555206)
chr8 (250-299)||(24621964-24622013)
[»] scaffold0097 (1 HSPs)
scaffold0097 (257-318)||(22528-22589)
[»] chr2 (4 HSPs)
chr2 (257-318)||(20718691-20718752)
chr2 (250-319)||(18928114-18928184)
chr2 (258-319)||(21651736-21651797)
chr2 (248-319)||(27498109-27498181)
[»] chr7 (5 HSPs)
chr7 (250-314)||(18083576-18083640)
chr7 (250-314)||(20146529-20146593)
chr7 (250-319)||(15756569-15756638)
chr7 (250-319)||(16088264-16088333)
chr7 (245-294)||(8341628-8341677)
[»] scaffold0032 (1 HSPs)
scaffold0032 (253-319)||(80131-80198)
[»] scaffold0111 (1 HSPs)
scaffold0111 (250-319)||(35724-35794)
[»] chr1 (2 HSPs)
chr1 (250-319)||(15807469-15807539)
chr1 (250-319)||(16673655-16673725)
[»] scaffold1367 (1 HSPs)
scaffold1367 (250-303)||(1569-1622)
[»] scaffold0299 (1 HSPs)
scaffold0299 (250-303)||(10825-10878)
[»] scaffold0186 (1 HSPs)
scaffold0186 (259-319)||(10541-10601)
[»] chr5 (5 HSPs)
chr5 (250-314)||(37277399-37277463)
chr5 (250-315)||(17362056-17362122)
chr5 (250-317)||(25340300-25340368)
chr5 (250-319)||(26724688-26724758)
chr5 (250-318)||(26057827-26057896)
[»] scaffold1121 (2 HSPs)
scaffold1121 (250-304)||(84-139)
scaffold1121 (250-319)||(2272-2342)
[»] scaffold0161 (1 HSPs)
scaffold0161 (245-319)||(4969-5044)
[»] chr4 (5 HSPs)
chr4 (257-319)||(31933199-31933262)
chr4 (250-319)||(11774179-11774248)
chr4 (250-319)||(17956947-17957016)
chr4 (250-305)||(11251717-11251772)
chr4 (250-319)||(9246926-9246996)
[»] scaffold0123 (1 HSPs)
scaffold0123 (250-319)||(32695-32765)
[»] scaffold0508 (1 HSPs)
scaffold0508 (250-319)||(5382-5451)
[»] scaffold0613 (1 HSPs)
scaffold0613 (250-318)||(3311-3379)
[»] scaffold0174 (1 HSPs)
scaffold0174 (250-314)||(24320-24384)


Alignment Details
Target: scaffold0115 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 16 - 318
Target Start/End: Complemental strand, 42074 - 41772
Alignment:
Q  16 tcaaggatcattgcaagcttaattatgagtacaagtgaatgaataagaaagagatcattttcaaactcttcaagatgcggctaaaggggaagtaagaatg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42074 tcaaggatcattgcaagcttaattatgagtacaagtgaatgaataagaaagagatcattttcaaactcttcaagatgcggctaaaggggaagtaagaatg 41975  T
Q  116 tcagagaaaattagataagttaatagagtcgaggtacatgtcaagaacgaggaagtggtcgaggaaaatttgaacatggaaacaatggaaaaggctaaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41974 tcagagaaaattagataagttaatagagtcgaggtacatgtcaagaacgaggaattggtcgaggaaaatttgaacatggaaacaatggaaaaggctaaaa 41875  T
Q  216 tttcaccaccgacagttatgagaatatagaaatataacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgc 315  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41874 tttcaccaccgacagttatgagaatatagaaatataataccttaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgc 41775  T
Q  316 tac 318  Q
    |||    
T  41774 tac 41772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 24216665 - 24216733
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctac 318  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||| |||||| ||||||||||||    
T  24216665 taacaccctaaacccttaaagcgataaatcacgcaaataatataatcattcaaagactttagatgctac 24216733  T

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Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 14796277 - 14796337
Alignment:
Q  254 accctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatg 314  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||||||    
T  14796277 accctaaacctttaaagtgataaatcacgcgaataatacattcatacaaggaatttagatg 14796337  T

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Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 6777313 - 6777367
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaag 304  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||| ||||||||    
T  6777313 taacaccctaaacccttaaagcgagaaatcacgcaaataatacaattatacaaag 6777367  T

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Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 23295639 - 23295569
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    ||||||||||||||||||||||||||||| ||   |||||||| ||||| ||||||| |||||||||||||    
T  23295639 taacaccctaaacccttaaagtgataaattactgaaataatacaaatcaaacaaagaatttagatgctact 23295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 14352204 - 14352248
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaa 294  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  14352204 taacaccctaaacccttaaagtgataaattacgcaaataatacaa 14352248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 17907738 - 17907806
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctac 318  Q
    ||||||||||||||||||| | ||||||||| || || |||||||  || |||||||||||||||||||    
T  17907738 taacaccctaaacccttaatgcgataaatcatgcaaagaatacaactattcaaagagtttagatgctac 17907806  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 1559737 - 1559806
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||||| |||||||||| || |||||||||||||    
T  1559737 taacaccgtaaacccttaaagcgataaattacgcgaaaaatacaaatcatacaagga-tttagatgctact 1559806  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 16166193 - 16166147
Alignment:
Q  248 tataacaccctaaacccttaaagtgataaatcacgcgaataatacaa 294  Q
    |||||||||||||||| |||||| |||||||||||| ||||| ||||    
T  16166193 tataacaccctaaaccattaaagcgataaatcacgcaaataacacaa 16166147  T

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Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 19637001 - 19636931
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaa-tcatacaaagagtttagatgctact 319  Q
    |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  19637001 taacaccctaaacccttagagcgataaatcacgcgaataatacaagtcatacaaaggatttagatgctact 19636931  T

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Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 15956344 - 15956413
Alignment:
Q  251 aacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||||| ||||  ||| |||||||||    
T  15956344 aacaccctaaacccttaaagcgataaatcacgcaaataatacaaatcatagaaaggatttcgatgctact 15956413  T

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Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 40355673 - 40355605
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctact 319  Q
    |||||| |||||||||||||  |||||| ||||| ||||||||||||||| ||||  |||||||||||||    
T  40355673 taacactctaaacccttaaaacgataaaccacgc-aataatacaatcatataaaggatttagatgctact 40355605  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 19707264 - 19707330
Alignment:
Q  253 caccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    |||||||||||||||||| |||| || ||||||||||| | |||||||| ||| ||||||||||||||    
T  19707264 caccctaaacccttaaagagatagattacgcgaataatgcaaatcatac-aagtgtttagatgctact 19707330  T

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Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 12800848 - 12800918
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaa-tcatacaaagagtttagatgctact 319  Q
    ||||| |||||||  |||||| ||||||| |||| |||||||||| ||||| ||||| |||||||||||||    
T  12800848 taacatcctaaacttttaaagcgataaattacgcaaataatacaaatcatataaagaatttagatgctact 12800918  T

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Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 16227526 - 16227596
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||  |||||| ||||||    
T  16227526 taacaccctaaacccttaaagcgataaatcacgcaaataatacaaatcatacaaaggatttagacgctact 16227596  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 25261198 - 25261263
Alignment:
Q  254 accctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctact 319  Q
    ||||||||||||||||| |||||| |||   ||||||||||||||||||||  |||||||||||||    
T  25261198 accctaaacccttaaagcgataaaacacataaataatacaatcatacaaaggatttagatgctact 25261263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 24555206 - 24555162
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaa 294  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||    
T  24555206 taacaccctaaacccttaaagcgataaattacgcgaataatacaa 24555162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 24621964 - 24622013
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcata 299  Q
    ||||||||||||| || |||||||||||| |||| ||| |||||||||||    
T  24621964 taacaccctaaactctaaaagtgataaattacgctaatgatacaatcata 24622013  T

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Target: scaffold0097 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 22528 - 22589
Alignment:
Q  257 ctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctac 318  Q
    |||||||||||||| |||||||||||| ||||||| ||| || |||||||||||||||||||    
T  22528 ctaaacccttaaagcgataaatcacgcaaataatataataattcaaagagtttagatgctac 22589  T

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Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 20718691 - 20718752
Alignment:
Q  257 ctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctac 318  Q
    |||||||||||||| |||||||||||| ||||||| ||| || |||||||||||||||||||    
T  20718691 ctaaacccttaaagcgataaatcacgcaaataatataataattcaaagagtttagatgctac 20718752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 18928114 - 18928184
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataata-caatcatacaaagagtttagatgctact 319  Q
    ||||| |||||||||||||||||||||||||||  |||||||  || |||||||||  |||||||||||||    
T  18928114 taacatcctaaacccttaaagtgataaatcacggaaataatagaaaacatacaaaggatttagatgctact 18928184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 21651736 - 21651797
Alignment:
Q  258 taaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctact 319  Q
    ||||| ||||||| |||||||||||| ||||||||||| ||||||||  | |||||||||||    
T  21651736 taaacgcttaaagcgataaatcacgcaaataatacaattatacaaaggatctagatgctact 21651797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 27498109 - 27498181
Alignment:
Q  248 tataacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    ||||||| |||||| ||| |||| |||||||||||  |||||||| |||||| |||||  |||||||||||||    
T  27498109 tataacatcctaaatcctcaaagcgataaatcacgtcaataatacaaatcatgcaaaggatttagatgctact 27498181  T

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Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 18083640 - 18083576
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatg 314  Q
    ||||||||||||||||||||||| |||||||| | ||| ||||||||||| ||||| ||||||||    
T  18083640 taacaccctaaacccttaaagtggtaaatcacacaaatgatacaatcatataaagaatttagatg 18083576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 20146529 - 20146593
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatg 314  Q
    ||||||||||||| ||||||| ||||||| || | ||||||||||||||||||||  ||||||||    
T  20146529 taacaccctaaactcttaaagcgataaattactcaaataatacaatcatacaaaggatttagatg 20146593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 15756638 - 15756569
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||||| |||||||||| || |||||||||||||    
T  15756638 taacaccgtaaacccttaaagcgataaattacgcgaaaaatacaaatcatacaagga-tttagatgctact 15756569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 16088264 - 16088333
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaa-agagtttagatgctact 319  Q
    ||||||||||||| ||||||  |||||||||||| ||||||||  |||||||| ||| |||||||||||||    
T  16088264 taacaccctaaactcttaaaacgataaatcacgcaaataatacgttcatacaacaga-tttagatgctact 16088333  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 8341677 - 8341628
Alignment:
Q  245 aaatataacaccctaaacccttaaagtgataaatcacgcgaataatacaa 294  Q
    |||| ||||||||||||||||| ||| ||||||| |||| ||||||||||    
T  8341677 aaatgtaacaccctaaacccttgaagcgataaattacgcaaataatacaa 8341628  T

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Target: scaffold0032 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 80131 - 80198
Alignment:
Q  253 caccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    |||||||||||||||||| ||||||||| || |||||||| ||||||||||||| |||||||| ||||    
T  80131 caccctaaacccttaaagcgataaatcatgcaaataatacaaatcatacaaagaatttagatgttact 80198  T

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Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 35794 - 35724
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    ||||||||||||||||||||| |||||| ||||  |||||||| ||||||||||||  |||||||||||||    
T  35794 taacaccctaaacccttaaagcgataaaccacgtaaataatacaaatcatacaaaggatttagatgctact 35724  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 15807539 - 15807469
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    ||||||||||||||||||||| ||||||||| || |||||||| |||||| |||||  |||||||||||||    
T  15807539 taacaccctaaacccttaaagagataaatcatgcaaataatacaaatcatgcaaaggatttagatgctact 15807469  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 16673655 - 16673725
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    |||||||||||| |||||||| |||||||||||| |||||||| |||||| |||||  | |||||||||||    
T  16673655 taacaccctaaatccttaaagcgataaatcacgcaaataatacaaatcatgcaaaggatctagatgctact 16673725  T

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Target: scaffold1367 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 1569 - 1622
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaa 303  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||| |||||||    
T  1569 taacaccctaaatccttaaagagataaatcacgcaaataatacaattatacaaa 1622  T

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Target: scaffold0299 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 10878 - 10825
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaa 303  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||| |||||||    
T  10878 taacaccctaaaccattaaagagataaatcacgcaaataatacaattatacaaa 10825  T

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Target: scaffold0186 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 10541 - 10601
Alignment:
Q  259 aaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctact 319  Q
    ||||||||||| |||||||| |||  ||||||||||||||||||||| |||||||| ||||    
T  10541 aaacccttaaaatgataaataacgaaaataatacaatcatacaaagaatttagatgatact 10601  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 37277399 - 37277463
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatg 314  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||| |||| ||| || ||||||||    
T  37277399 taacatcctaaacccttaaagtgataaatctcgcaaataatacattcattcaaggaatttagatg 37277463  T

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Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 17362056 - 17362122
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgc 315  Q
    ||||||||||||||||||||| ||||||| || | |||||||| ||||||||||||  |||||||||    
T  17362056 taacaccctaaacccttaaagcgataaattacacaaataatacaaatcatacaaaggatttagatgc 17362122  T

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Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 25340300 - 25340368
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgcta 317  Q
    ||||||| ||||| |||||||||||||||||||  |||||||| |||||| |||||  |||||||||||    
T  25340300 taacaccttaaactcttaaagtgataaatcacgtaaataatacaaatcatgcaaaggatttagatgcta 25340368  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 26724688 - 26724758
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataata-caatcatacaaagagtttagatgctact 319  Q
    ||||||||||||| ||||||| ||||||| | || |||||||  |||||| |||||| |||||||||||||    
T  26724688 taacaccctaaactcttaaagcgataaattatgcaaataatataaatcatgcaaagaatttagatgctact 26724758  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 26057827 - 26057896
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatac-aaagagtttagatgctac 318  Q
    |||||||||||||||| || || |||||||| || |||||  ||||||| | ||||||||||||||||||    
T  26057827 taacaccctaaaccctgaatgtaataaatcatgccaataagtcaatcattcaaaagagtttagatgctac 26057896  T

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Target: scaffold1121 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold1121
Description:

Target: scaffold1121; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 139 - 84
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaag 304  Q
    ||||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||    
T  139 taacaccctaaacccttaaagcgataaattacgcaaataatacaaatcatacaaag 84  T

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Target: scaffold1121; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 2272 - 2342
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaa-tcatacaaagagtttagatgctact 319  Q
    |||||||||||||||||||||  ||| || |||  || ||||||| ||||||||||| |||||||||||||    
T  2272 taacaccctaaacccttaaagctatatattacggaaacaatacaaatcatacaaagaatttagatgctact 2342  T

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Target: scaffold0161 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 319
Target Start/End: Complemental strand, 5044 - 4969
Alignment:
Q  245 aaatataacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    |||| ||||||||||||||||||||| ||||||| || | ||| |||| ||||||||||||  |||||||||||||    
T  5044 aaatttaacaccctaaacccttaaagcgataaattactcaaatgatacaaatcatacaaaggatttagatgctact 4969  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 31933199 - 31933262
Alignment:
Q  257 ctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||||||  |||||||| ||||    
T  31933199 ctaaacccttaaagcgataaatcacgcaaataatacaaatcatacaaaggatttagatgttact 31933262  T

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Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 11774179 - 11774248
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctact 319  Q
    ||||||||||||| || |||| ||||||| |||| ||| ||||||||||| ||||| |||||||| ||||    
T  11774179 taacaccctaaactctaaaagcgataaattacgccaatgatacaatcatataaagaatttagatgttact 11774248  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 17956947 - 17957016
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctact 319  Q
    ||||||| ||||||||||||  |||||||||| | |||||||||| ||| |||||  |||||||||||||    
T  17956947 taacaccataaacccttaaaacgataaatcacacaaataatacaaacatgcaaaggatttagatgctact 17957016  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 11251717 - 11251772
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaaga 305  Q
    ||||||||| ||||||||||| ||||||||| || ||| ||||||||||| |||||    
T  11251717 taacaccctgaacccttaaagcgataaatcatgcaaatgatacaatcatataaaga 11251772  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 9246926 - 9246996
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    ||||||||||||||| |||||  |||||| |||| |||||||| || |||||||||  |||||||||||||    
T  9246926 taacaccctaaacccctaaagcaataaattacgcaaataatacaaaacatacaaaggatttagatgctact 9246996  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 32695 - 32765
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatac-aatcatacaaagagtttagatgctact 319  Q
    ||||||||||||||||||||| |||||||||||  |||||||| |||||| |||||  ||||||| |||||    
T  32695 taacaccctaaacccttaaagcgataaatcacgtaaataatacaaatcatgcaaaggatttagatcctact 32765  T

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Target: scaffold0508 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 5382 - 5451
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctact 319  Q
    ||||||||| ||| || ||||||||||||||||| ||| ||| ||||||| ||||| |||||||| ||||    
T  5382 taacaccctgaactctaaaagtgataaatcacgctaatgatataatcatataaagaatttagatgttact 5451  T

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Target: scaffold0613 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0613
Description:

Target: scaffold0613; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 3379 - 3311
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatgctac 318  Q
    ||||||||||||||||||| | ||||||||| || |||||| |||| |  |||||||||||| ||||||    
T  3379 taacaccctaaacccttaatgcgataaatcatgcaaataattcaattactcaaagagtttaggtgctac 3311  T

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Target: scaffold0174 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 24384 - 24320
Alignment:
Q  250 taacaccctaaacccttaaagtgataaatcacgcgaataatacaatcatacaaagagtttagatg 314  Q
    ||||||||||||| ||||||| |||||||||||| ||| ||| |||||| || ||| ||||||||    
T  24384 taacaccctaaactcttaaagcgataaatcacgcaaatcatataatcattcagagaatttagatg 24320  T

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