View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18217_low_8 (Length: 262)
Name: NF18217_low_8
Description: NF18217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18217_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 252
Target Start/End: Complemental strand, 12359774 - 12359542
Alignment:
| Q |
20 |
acggcaactctttaatctcctcagctaactcattaacctcctttgagcgatcattaaagactcgcttctttccctccaaatcaccaaaatacaagcatgc |
119 |
Q |
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| T |
12359774 |
acggcaactctttaatctcctcagctaactcattaacctcctttaagcgatcattaaagactcgcttctttccctccaaatcaccaaaatacaagcatgc |
12359675 |
T |
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| Q |
120 |
caaatctaccaaaacccctgtctaattttcttagacctccattgtgctgtccaacaatccaaatagttnnnnnnnttaggcggagtaatgaaagtaaatc |
219 |
Q |
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| T |
12359674 |
caaatcaaccaaaacccctgtctaattttcttagacctccattgtgctgtccaacaatccaaatagttaaaaaaattaggcggagtaatgaaagtaaatc |
12359575 |
T |
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| Q |
220 |
tcaaccaatgcatcaccttcacccaaacctttg |
252 |
Q |
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|||||||||| |||||||||||||||||||||| |
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| T |
12359574 |
tcaaccaatgaatcaccttcacccaaacctttg |
12359542 |
T |
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