View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18222_low_5 (Length: 333)

Name: NF18222_low_5
Description: NF18222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18222_low_5
NF18222_low_5
[»] chr1 (45 HSPs)
chr1 (102-326)||(15323047-15323275)
chr1 (1-100)||(15322912-15323011)
chr1 (179-333)||(1486649-1486807)
chr1 (191-269)||(398772-398851)
chr1 (198-333)||(46348328-46348462)
chr1 (191-269)||(5927347-5927426)
chr1 (191-268)||(6427323-6427401)
chr1 (198-269)||(38078668-38078740)
chr1 (189-279)||(37055853-37055944)
chr1 (191-269)||(48450594-48450673)
chr1 (177-329)||(18471257-18471405)
chr1 (191-244)||(2896154-2896207)
chr1 (191-279)||(5376497-5376586)
chr1 (191-279)||(6612168-6612257)
chr1 (195-279)||(9629897-9629982)
chr1 (198-266)||(18556466-18556535)
chr1 (191-279)||(20157347-20157436)
chr1 (191-269)||(14359529-14359607)
chr1 (200-333)||(22515832-22515964)
chr1 (184-261)||(1262850-1262928)
chr1 (189-279)||(5944252-5944345)
chr1 (186-263)||(8842727-8842805)
chr1 (204-269)||(36878447-36878513)
chr1 (193-269)||(9709795-9709872)
chr1 (192-264)||(23531790-23531863)
chr1 (191-244)||(40917724-40917777)
chr1 (193-269)||(41877477-41877554)
chr1 (202-333)||(37598816-37598945)
chr1 (198-269)||(52903229-52903301)
chr1 (189-263)||(34257923-34257998)
chr1 (193-263)||(34298411-34298482)
chr1 (194-263)||(16927198-16927268)
chr1 (204-269)||(22881623-22881689)
chr1 (168-269)||(31014993-31015095)
chr1 (192-269)||(38503294-38503372)
chr1 (191-263)||(5898279-5898352)
chr1 (191-279)||(7918208-7918297)
chr1 (191-244)||(10572622-10572675)
chr1 (8-48)||(15312964-15313005)
chr1 (191-236)||(48040503-48040548)
chr1 (184-244)||(15641063-15641123)
chr1 (226-269)||(16164322-16164366)
chr1 (204-244)||(17831564-17831604)
chr1 (289-333)||(29144325-29144369)
chr1 (225-268)||(32461471-32461515)
[»] chr6 (40 HSPs)
chr6 (191-325)||(33001242-33001375)
chr6 (198-333)||(17841534-17841668)
chr6 (168-279)||(3398569-3398680)
chr6 (191-333)||(12696297-12696443)
chr6 (191-269)||(7938089-7938168)
chr6 (184-269)||(426521-426607)
chr6 (191-333)||(34595107-34595248)
chr6 (191-279)||(9027151-9027240)
chr6 (191-279)||(16766670-16766759)
chr6 (191-333)||(8776913-8777059)
chr6 (194-242)||(13851712-13851760)
chr6 (193-263)||(9658854-9658925)
chr6 (195-269)||(17341671-17341746)
chr6 (192-269)||(5732517-5732595)
chr6 (192-269)||(9629357-9629435)
chr6 (191-326)||(853811-853945)
chr6 (193-269)||(7086770-7086847)
chr6 (191-279)||(9107367-9107456)
chr6 (191-279)||(10294080-10294169)
chr6 (192-333)||(7977775-7977915)
chr6 (168-269)||(6389693-6389795)
chr6 (193-262)||(8805586-8805656)
chr6 (207-272)||(19040341-19040407)
chr6 (191-244)||(5000659-5000712)
chr6 (191-279)||(10770671-10770760)
chr6 (198-279)||(21395305-21395386)
chr6 (202-269)||(7265600-7265668)
chr6 (184-263)||(7625088-7625168)
chr6 (168-279)||(8365516-8365628)
chr6 (198-269)||(20371117-20371189)
chr6 (198-268)||(10888982-10889053)
chr6 (198-264)||(16388245-16388311)
chr6 (191-269)||(16833281-16833360)
chr6 (191-269)||(30866151-30866230)
chr6 (204-269)||(10842518-10842584)
chr6 (283-333)||(31959214-31959264)
chr6 (193-269)||(15489739-15489816)
chr6 (167-279)||(25038068-25038181)
chr6 (198-301)||(28152079-28152180)
chr6 (192-263)||(34073360-34073432)
[»] chr3 (34 HSPs)
chr3 (191-333)||(28917974-28918117)
chr3 (191-333)||(55401048-55401189)
chr3 (167-269)||(8383206-8383309)
chr3 (198-268)||(25948895-25948966)
chr3 (177-280)||(15796290-15796394)
chr3 (191-262)||(25064882-25064954)
chr3 (193-279)||(14216867-14216954)
chr3 (193-279)||(14222996-14223083)
chr3 (191-269)||(24205048-24205127)
chr3 (196-269)||(10268493-10268567)
chr3 (191-244)||(3164058-3164111)
chr3 (191-244)||(26492238-26492291)
chr3 (201-269)||(49505161-49505230)
chr3 (191-262)||(5441045-5441117)
chr3 (192-279)||(9800014-9800102)
chr3 (200-279)||(14832081-14832161)
chr3 (195-270)||(32804546-32804622)
chr3 (191-269)||(8587028-8587107)
chr3 (191-269)||(10335293-10335372)
chr3 (197-263)||(11493374-11493441)
chr3 (201-244)||(23870592-23870635)
chr3 (191-269)||(38731191-38731270)
chr3 (166-244)||(4466633-4466711)
chr3 (198-244)||(6525713-6525759)
chr3 (191-244)||(2620086-2620139)
chr3 (191-279)||(11665917-11666006)
chr3 (191-279)||(14829663-14829751)
chr3 (192-268)||(23184080-23184157)
chr3 (205-268)||(4987299-4987363)
chr3 (194-269)||(4990974-4991050)
chr3 (193-245)||(12674533-12674585)
chr3 (204-244)||(15544679-15544719)
chr3 (198-269)||(22774077-22774149)
chr3 (198-269)||(29508424-29508496)
[»] chr2 (26 HSPs)
chr2 (192-278)||(20539672-20539759)
chr2 (193-268)||(21616737-21616813)
chr2 (198-269)||(39323244-39323316)
chr2 (198-269)||(37558957-37559029)
chr2 (191-269)||(23717999-23718078)
chr2 (191-269)||(24105671-24105750)
chr2 (191-269)||(30404857-30404936)
chr2 (189-279)||(36756341-36756432)
chr2 (193-262)||(28412325-28412395)
chr2 (189-269)||(4882703-4882784)
chr2 (193-261)||(12940950-12941019)
chr2 (198-241)||(4763447-4763490)
chr2 (196-333)||(6940233-6940369)
chr2 (194-264)||(15349816-15349887)
chr2 (196-333)||(15972851-15972987)
chr2 (192-262)||(21782832-21782903)
chr2 (191-269)||(31018563-31018642)
chr2 (196-234)||(10547973-10548011)
chr2 (193-269)||(14996230-14996308)
chr2 (204-269)||(31808063-31808129)
chr2 (193-262)||(36409641-36409711)
chr2 (198-262)||(16069268-16069333)
chr2 (193-269)||(27286299-27286376)
chr2 (167-269)||(19536404-19536508)
chr2 (198-269)||(21374706-21374778)
chr2 (193-264)||(23921228-23921300)
[»] chr7 (38 HSPs)
chr7 (177-333)||(13770650-13770810)
chr7 (193-244)||(26733279-26733330)
chr7 (191-333)||(5409776-5409922)
chr7 (194-269)||(14077441-14077517)
chr7 (194-269)||(14387469-14387545)
chr7 (168-279)||(27944991-27945103)
chr7 (192-333)||(43027409-43027554)
chr7 (165-242)||(24105626-24105702)
chr7 (192-263)||(5235960-5236032)
chr7 (168-279)||(7328688-7328800)
chr7 (184-244)||(11722131-11722191)
chr7 (179-269)||(11061083-11061174)
chr7 (193-333)||(598183-598322)
chr7 (191-272)||(17851404-17851486)
chr7 (204-269)||(42720897-42720963)
chr7 (194-333)||(1433430-1433573)
chr7 (196-280)||(10042915-10043000)
chr7 (191-279)||(24339615-24339704)
chr7 (190-242)||(4793835-4793887)
chr7 (193-268)||(5956248-5956324)
chr7 (191-269)||(15902795-15902874)
chr7 (184-333)||(25481868-25482016)
chr7 (184-269)||(19206016-19206102)
chr7 (179-279)||(6028586-6028687)
chr7 (198-333)||(15680789-15680923)
chr7 (191-275)||(22868015-22868100)
chr7 (203-279)||(32308105-32308182)
chr7 (200-266)||(1401007-1401074)
chr7 (191-269)||(43249966-43250045)
chr7 (192-279)||(49107795-49107882)
chr7 (168-257)||(2034392-2034481)
chr7 (192-269)||(4017801-4017879)
chr7 (177-214)||(1656643-1656680)
chr7 (225-277)||(35861971-35862024)
chr7 (194-269)||(3721070-3721145)
chr7 (194-269)||(21140989-21141065)
chr7 (189-269)||(21864777-21864860)
chr7 (199-262)||(29787383-29787447)
[»] scaffold0053 (1 HSPs)
scaffold0053 (191-333)||(8771-8912)
[»] scaffold0003 (1 HSPs)
scaffold0003 (191-279)||(241567-241656)
[»] chr8 (30 HSPs)
chr8 (191-279)||(22651949-22652038)
chr8 (192-279)||(2572053-2572141)
chr8 (201-279)||(15816126-15816205)
chr8 (191-269)||(20873042-20873121)
chr8 (194-268)||(36934646-36934721)
chr8 (191-244)||(29510337-29510390)
chr8 (201-269)||(34897068-34897137)
chr8 (191-269)||(4298893-4298972)
chr8 (193-259)||(13018256-13018323)
chr8 (184-269)||(25192354-25192440)
chr8 (189-269)||(8343287-8343368)
chr8 (167-244)||(13436997-13437074)
chr8 (184-244)||(4673458-4673518)
chr8 (221-272)||(20785469-20785521)
chr8 (204-263)||(39954292-39954352)
chr8 (191-269)||(22197749-22197828)
chr8 (191-269)||(24362209-24362288)
chr8 (163-269)||(24669379-24669485)
chr8 (191-269)||(27213520-27213599)
chr8 (198-245)||(31109550-31109597)
chr8 (193-244)||(41838156-41838207)
chr8 (256-333)||(4498342-4498417)
chr8 (204-269)||(20679402-20679468)
chr8 (195-244)||(29776013-29776062)
chr8 (191-243)||(926822-926874)
chr8 (184-263)||(3677752-3677832)
chr8 (168-236)||(28642358-28642426)
chr8 (191-269)||(29357949-29358029)
chr8 (210-269)||(31236584-31236644)
chr8 (226-269)||(44505140-44505184)
[»] chr4 (26 HSPs)
chr4 (189-269)||(44081584-44081665)
chr4 (191-333)||(23292931-23293072)
chr4 (193-279)||(30838185-30838272)
chr4 (193-269)||(20633460-20633534)
chr4 (191-333)||(28084494-28084638)
chr4 (193-244)||(20521882-20521933)
chr4 (191-333)||(3947706-3947852)
chr4 (191-242)||(847924-847975)
chr4 (191-269)||(35157992-35158071)
chr4 (191-333)||(30982812-30982961)
chr4 (191-268)||(36635297-36635375)
chr4 (191-268)||(40481610-40481687)
chr4 (193-268)||(27706185-27706261)
chr4 (191-269)||(35723391-35723470)
chr4 (201-279)||(4383351-4383429)
chr4 (193-244)||(11651167-11651218)
chr4 (193-263)||(22440613-22440684)
chr4 (199-269)||(33950117-33950188)
chr4 (282-333)||(35161099-35161150)
chr4 (198-279)||(12895113-12895194)
chr4 (192-269)||(14126118-14126196)
chr4 (192-277)||(31800477-31800563)
chr4 (198-258)||(12077808-12077869)
chr4 (191-333)||(12895219-12895360)
chr4 (192-279)||(16303263-16303351)
chr4 (191-269)||(49430998-49431078)
[»] chr5 (28 HSPs)
chr5 (167-264)||(22013363-22013461)
chr5 (168-269)||(19820403-19820503)
chr5 (198-269)||(14674249-14674321)
chr5 (191-333)||(21191001-21191142)
chr5 (179-269)||(6326304-6326395)
chr5 (198-272)||(27144443-27144518)
chr5 (191-279)||(13287396-13287485)
chr5 (202-276)||(30098310-30098385)
chr5 (204-269)||(5467985-5468051)
chr5 (191-331)||(21522723-21522873)
chr5 (191-331)||(21533289-21533439)
chr5 (204-269)||(31084309-31084375)
chr5 (201-333)||(39698524-39698666)
chr5 (193-234)||(15410491-15410532)
chr5 (199-279)||(19579682-19579763)
chr5 (191-269)||(6247595-6247674)
chr5 (191-269)||(36642769-36642848)
chr5 (198-268)||(43001780-43001851)
chr5 (198-244)||(7175052-7175098)
chr5 (191-241)||(15382450-15382500)
chr5 (194-244)||(19552576-19552626)
chr5 (224-269)||(23012415-23012461)
chr5 (191-276)||(24906301-24906387)
chr5 (203-279)||(3966488-3966565)
chr5 (191-266)||(14422877-14422951)
chr5 (179-244)||(17123009-17123074)
chr5 (198-269)||(16203802-16203874)
chr5 (194-261)||(42488068-42488136)
[»] scaffold0223 (1 HSPs)
scaffold0223 (191-279)||(20145-20234)
[»] scaffold0007 (1 HSPs)
scaffold0007 (191-269)||(225275-225354)
[»] scaffold0652 (1 HSPs)
scaffold0652 (194-333)||(407-545)
[»] scaffold0018 (2 HSPs)
scaffold0018 (191-269)||(178825-178905)
scaffold0018 (193-272)||(192253-192333)
[»] scaffold0008 (1 HSPs)
scaffold0008 (196-279)||(263369-263453)
[»] scaffold0103 (1 HSPs)
scaffold0103 (198-268)||(51791-51862)
[»] scaffold0027 (1 HSPs)
scaffold0027 (179-261)||(46643-46726)
[»] scaffold0246 (1 HSPs)
scaffold0246 (191-268)||(19549-19626)
[»] scaffold0044 (1 HSPs)
scaffold0044 (208-269)||(53170-53232)
[»] scaffold0004 (1 HSPs)
scaffold0004 (201-269)||(92790-92859)
[»] scaffold0171 (1 HSPs)
scaffold0171 (191-279)||(23393-23482)
[»] scaffold0122 (1 HSPs)
scaffold0122 (191-279)||(8639-8728)
[»] scaffold0722 (1 HSPs)
scaffold0722 (201-268)||(7040-7108)
[»] scaffold0598 (1 HSPs)
scaffold0598 (198-242)||(8088-8132)
[»] scaffold0306 (1 HSPs)
scaffold0306 (168-244)||(13350-13426)
[»] scaffold0152 (1 HSPs)
scaffold0152 (168-244)||(21901-21977)
[»] scaffold0085 (1 HSPs)
scaffold0085 (198-269)||(26373-26445)
[»] scaffold0083 (1 HSPs)
scaffold0083 (187-219)||(45589-45621)
[»] scaffold0049 (1 HSPs)
scaffold0049 (183-242)||(63737-63797)
[»] scaffold0024 (1 HSPs)
scaffold0024 (285-329)||(68180-68224)


Alignment Details
Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 102 - 326
Target Start/End: Original strand, 15323047 - 15323275
Alignment:
Q  102 aagctttcattggtcacagttacccatgttgccatgtcttctttcgctcttattattagtagaattctatgaagcatggacccggatatcggacacgaca 201  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | | ||||||| |||||||||| |||| | |||||||||||    
T  15323047 aagctttcattggtcacagttacccatcttgccatgtcttctttcgctcttattattactggtattctataaagcatggacacggacaccggacacgaca 15323146  T
Q  202 cggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgacatgtgtccgac 297  Q
     ||||||||||| |||||||| | ||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||   ||| |||| |||||||||    
T  15323147 tggacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaattgtaagtgtctgtatcgtgttggatatgacacgtgtccgac 15323246  T
Q  298 accgaaatacacctaatccaaagagtgtc 326  Q
    ||||||| ||||||||||| | |||||||    
T  15323247 accgaaacacacctaatccgaggagtgtc 15323275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15322912 - 15323011
Alignment:
Q  1 aattatcaaaggaacagttgcatcctatttaacattaaaagaataatagcaatcaagctgcatgccttcatctaaagttcatggaatttgatgcagcata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  15322912 aattatcaaaggaacagttgcatcctatttaacattaaaagcataatagcaatcaagctgcatgccttgatctaaagttcatggaatttgatgaagcata 15323011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 179 - 333
Target Start/End: Complemental strand, 1486807 - 1486649
Alignment:
Q  179 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgt 277  Q
    |||| |||||| |||| |||||||||| |||||||||  || || ||||||||||||| ||||||| |||||| | |||||||||||||||| || ||||    
T  1486807 ggacacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgt 1486708  T
Q  278 gt---atacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||   | |||||| |||||||||||||  | || |||||||| | ||||||| ||||||    
T  1486707 gtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgctt 1486649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 398851 - 398772
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| |||||| | |||||||||| |||||    
T  398851 cggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 333
Target Start/End: Complemental strand, 46348462 - 46348328
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 296  Q
    |||||||||||||||||| ||| || ||||||||||||| ||||||| |||||||| |||||||| ||||||| || ||  | | |||||| ||||||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc--ggacacgacacgtgtccga 46348365  T
Q  297 caccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||||| | || ||| |||| | | ||||||||||||    
T  46348364 caccgagacacgcctgatccgaggtgtgtccgtgctt 46348328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 5927426 - 5927347
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||||||||||||||   | || ||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  5927426 cggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtc 5927347  T

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Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 6427323 - 6427401
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||| |||||||||||||||| | | |||||||||||||||| ||||||| |||||| |||||||||||| ||||    
T  6427323 cggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 38078740 - 38078668
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| ||||||||||||||| || ||||||||||||| ||||||| |||||| |||||||||| |||||||    
T  38078740 gacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtc 38078668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 37055944 - 37055853
Alignment:
Q  189 atcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||||| ||||| |||||||| || ||||||| ||||||||||||| ||||| | |||||||| |||||||| |||| || |||||||||    
T  37055944 atcggacatgacacagacactgatacatcgatactgctaataatttgagaaaattacataatttagtgtaattacaagtatcagtatcgtgt 37055853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 48450673 - 48450594
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||||||||||| | | || ||||||||||||| ||||| | |||||||| |||||||| |||||||    
T  48450673 cggacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtc 48450594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 329
Target Start/End: Original strand, 18471257 - 18471405
Alignment:
Q  177 atggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttg--acaaaatca-ataatttaatgtaattataagtgtctgta 273  Q
    |||||| ||||||||||| |||||||||||| |||| |||||| || ||||||||||||  | ||||||| |||||| | | |||||| |||||||        
T  18471257 atggacacggatatcggatacgacacggacaatgacccgtcgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtc---- 18471352  T
Q  274 tcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgt 329  Q
        ||| |||||| |||||||||||||||| ||||||||| | | ||||||||||    
T  18471353 ---ggtacacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgt 18471405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 2896207 - 2896154
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||    
T  2896207 cggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatca 2896154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 5376586 - 5376497
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| | ||||| | |||||| | |||||||| ||||||| || ||||||    
T  5376586 cggacacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgt 5376497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 6612257 - 6612168
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||| ||||||| |||||| | ||||||||||| ||||| | |||||| | |||||||| ||||||| || ||||||    
T  6612257 cggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgt 6612168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 279
Target Start/End: Complemental strand, 9629982 - 9629897
Alignment:
Q  195 cacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||| |||||| ||||| |||| |||||||||||||||| ||||||| |||||| | ||| |||||||||||| || ||||||    
T  9629982 cacgacatggacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgt 9629897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 18556535 - 18556466
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagt 266  Q
    |||||||||||||||||| ||| || ||||||||||||| || |||| ||||||||||||||||| ||||    
T  18556535 gacacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 20157436 - 20157347
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||||||||||| ||||||||| |||| |||||||||||| ||| ||||||| |||||| | |||||| ||| ||||| || ||||||    
T  20157436 cggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgt 20157347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 14359607 - 14359529
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| ||||| |||||| ||| || ||||||||||||| ||||||| |||||||| |||||||| |||||||    
T  14359607 cggacacgacacagacacggacacgccgacacagctaataatttga-aaaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 22515964 - 22515832
Alignment:
Q  200 cacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgaca 298  Q
    ||||||||| ||||||  || || ||||||||||||| ||||||| |||||||| |||||||| ||||||| || ||  | | ||||||  | |||||||    
T  22515964 cacggacacggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc--ggacacgacacatatccgaca 22515867  T
Q  299 ccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||| | || |||||||| | ||||||||||||||    
T  22515866 ccgagacacgcctaatccgaggagtgtccgtgctt 22515832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 1262850 - 1262928
Alignment:
Q  184 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaatta 261  Q
    |||||| ||||||||||||| |||| |||||| ||| || ||||||||||||| ||||||| |||||| ||| ||||||    
T  1262850 cggataccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 5944252 - 5944345
Alignment:
Q  189 atcggacacgacacggacactgacacgtcgataccgctaataatttg--acaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||||||||||| |||||||||||| ||  || ||||||||||||  | ||||||| |||||| | |||||||||||||||| || ||||||    
T  5944252 atcggacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 5944345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 8842805 - 8842727
Alignment:
Q  186 gatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    ||||||||||| ||||| |||||||||||| ||  ||| ||| |||||||| |||| || |||||||||||||||||||    
T  8842805 gatatcggacatgacacagacactgacacgccggcaccactagtaatttgagaaaaacatataatttaatgtaattata 8842727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 36878447 - 36878513
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| ||| |||||||||||||||| ||||||| |||||| | |||||||||| |||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtc 36878513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 9709795 - 9709872
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||||||| | | | |||||||||||||||| ||||||| ||||||   |||||||||| |||||    
T  9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtc 9709872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 23531863 - 23531790
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataa 264  Q
    |||||||| |||||||| ||||| || |||| ||||||||||||| || |||| |||||| |||||||||||||    
T  23531863 ggacacgatacggacaccgacacttcaatactgctaataatttgaaaatatcacataattcaatgtaattataa 23531790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 40917724 - 40917777
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||||||| ||||||||| ||| || ||||||||||||| |||||||    
T  40917724 cggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatca 40917777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 41877554 - 41877477
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||| |||||||  ||| ||| |||||||||||||||| ||||| | |||||||| |||||||| |||||||    
T  41877554 gacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtc 41877477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 333
Target Start/End: Original strand, 37598816 - 37598945
Alignment:
Q  202 cggacactgacacgtcgataccgctaataatttgacaaaatcaataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacaccg 301  Q
    |||||||||||||| ||| ||  |||||||||||| |||||||  |||| | |||||||||||||||| || ||  | | |||||| ||||||||||  |    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcacaaattcagtgtaattataagtgtcggtgtc--ggacacgacacgtgtccgacaatg 37598913  T
Q  302 aaatacacctaatccaaagagtgtccgtgctt 333  Q
      | || |||||||| | ||||||||||||||    
T  37598914 ggacacgcctaatccgaggagtgtccgtgctt 37598945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 52903229 - 52903301
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| ||||| |||||||| ||||||||| | ||||||| |||||| | |||||||||| |||||    
T  52903229 gacacggacactaacacgccgataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtc 52903301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 34257998 - 34257923
Alignment:
Q  189 atcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    |||||||| || ||||| | ||||||||||| |||| ||||||||| | ||||||| |||||||| ||||||||||    
T  34257998 atcggacatgatacggatattgacacgtcgacaccgttaataatttaataaaatcacataatttagtgtaattata 34257923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 34298411 - 34298482
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    ||||||||||||| ||||||||  ||| ||| |||||||||||| ||||||| |||||| | ||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 16927268 - 16927198
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    ||||||||| |||||||||||||||  |  ||||||||||||| ||||||| |||||| | ||||||||||    
T  16927268 acacgacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattata 16927198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 22881689 - 22881623
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| ||| ||  |||||||||||| ||||||| |||||||| |||||||| |||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 22881623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 31014993 - 31015095
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagt 266  Q
    |||||||||| |||| | || | ||| |||||||||| ||||||| || | | || ||||||||||||| ||||||| |||||| | |||||||| ||||    
T  31014993 ctatgaagcacggacacagacaccgggcacgacacgggcactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaattacaagt 31015092  T
Q  267 gtc 269  Q
    |||    
T  31015093 gtc 31015095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 38503294 - 38503372
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||| |||||||||||| ||||  ||| |||||||||||||||| ||||||| ||| || | |||||||||| |||||    
T  38503294 ggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtc 38503372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 5898352 - 5898279
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    |||||| ||||| |||||||| ||| ||| |||||||||||| ||| ||||||| |||||| | ||||||||||    
T  5898352 cggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattata 5898279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 7918297 - 7918208
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||||||||| |||| |||||||  || | | |||||||||||| ||||||| |||||| | |||||||||| ||||| || ||||||    
T  7918297 cggacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 10572675 - 10572622
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||| | ||||||||||| ||| ||| |||||||||||| |||||||    
T  10572675 cggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatca 10572622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 15312964 - 15313005
Alignment:
Q  8 aaaggaacagttgcatcctatttaaca-ttaaaagaataata 48  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  15312964 aaagaaacagttgcatcctatttaacatttaaaagaataata 15313005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 48040548 - 48040503
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttga 236  Q
    ||||||||||||||||||||||||| ||| || | |||||||||||    
T  48040548 cggacacgacacggacactgacacgccgacacagataataatttga 48040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 15641123 - 15641063
Alignment:
Q  184 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||| |||||||| |||||||||||||||| | ||| || ||||||||||| | |||||||    
T  15641123 cggacatcggacatgacacggacactgacatgccgacactgctaataatttaagaaaatca 15641063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 16164366 - 16164322
Alignment:
Q  226 taataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtc 16164322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 17831604 - 17831564
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||||||||||| ||| |||||||||||||||| |||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatca 17831564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 29144369 - 29144325
Alignment:
Q  289 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||||||||||||| || || |||||||| ||||||||||||||||    
T  29144369 gtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 29144325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 32461515 - 32461471
Alignment:
Q  225 ctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||    
T  32461515 ctaataatttgaaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 325
Target Start/End: Complemental strand, 33001375 - 33001242
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 289  Q
    ||||||| |||||| || ||||||| ||| || ||||||||||||| ||||||| |||||| |||||||||||| ||||| || |||   | |||||| |    
T  33001375 cggacacaacacggtcaatgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcgg--acacgacacg 33001278  T
Q  290 tgtccgacaccgaaatacacctaatccaaagagtgt 325  Q
    |||| ||||||||||||| |||||||||||||||||    
T  33001277 tgtctgacaccgaaatacgcctaatccaaagagtgt 33001242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 333
Target Start/End: Complemental strand, 17841668 - 17841534
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 296  Q
    |||||||||||||||||| ||| || ||||||||||||| ||||||| |||||||| |||||||| ||||| | || ||  | | |||||||||||||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtc--ggacacgacatgtgtccga 17841571  T
Q  297 caccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||| || | || |||||||| | ||||||||||||||    
T  17841570 cactgagacacgcctaatccgaggagtgtccgtgctt 17841534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 3398569 - 3398680
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagt 266  Q
    ||||||||||||||  |||| |||| |||||||||||||||||||||| ||| || ||||||||||||| ||||||| |||||| | |||||||||||||    
T  3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattataagt 3398667  T
Q  267 gtctgtatcgtgt 279  Q
     || || ||||||    
T  3398668 atcggtgtcgtgt 3398680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 12696297 - 12696443
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgac 286  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||| ||||| | |||||| | |||||||| ||||||| || ||||||   | |||||    
T  12696297 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgac 12696396  T
Q  287 atgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    | ||||| |||||||  | |||||| |||||| ||||||| ||||||    
T  12696397 acgtgtctgacaccgggacacaccttatccaaggagtgtctgtgctt 12696443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 7938089 - 7938168
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||| ||||||||||||| ||| || ||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  7938089 cggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtc 7938168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 426607 - 426521
Alignment:
Q  184 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| ||||||||||||||||||||||||| ||| || | ||||||||||| ||||||| |||||| |||||||||| |||||||    
T  426607 cggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtc 426521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 34595107 - 34595248
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 289  Q
    ||||||||||||||||| ||||||| ||| ||  |||||||||||| ||||||| |||||| | |||||||| ||||||| || ||  | | |||||| |    
T  34595107 cggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc--ggacacgacacg 34595204  T
Q  290 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||| |||||||  | ||||||||||| | ||||||||||||||    
T  34595205 tgtctgacaccgggacacacctaatccgaggagtgtccgtgctt 34595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 9027151 - 9027240
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| | ||||| ||||||   |||||||||| ||||| || ||||||    
T  9027151 cggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgt 9027240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 16766670 - 16766759
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||| ||||||||||||| ||| || ||||||||||||| ||||||| |||||| | |||||||| ||||||| || ||||||    
T  16766670 cggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 16766759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 8777059 - 8776913
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcg---tgtatacgac 286  Q
    ||||||||||||||||||||||||| ||| ||  |||||||||||| ||||||| | |||| | |||||||| ||||||  || |||      | |||||    
T  8777059 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacgacacgac 8776960  T
Q  287 atgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    | |||||||||||||| | ||||||||||| | ||||||||||||||    
T  8776959 acgtgtccgacaccgagacacacctaatccgaggagtgtccgtgctt 8776913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 13851712 - 13851760
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaat 242  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaat 13851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 9658854 - 9658925
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    ||||||||||||||||||||||| ||| |||||||||||||| | ||||||| |||||| | ||||||||||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata 9658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 17341746 - 17341671
Alignment:
Q  195 cacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||| |||||||||| ||| |||| ||||||||||| ||||||| |||||| | ||||||||||||||||    
T  17341746 cacgacacgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 5732595 - 5732517
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||| ||||||||||||| ||| |||| ||||||||||| ||||||| ||| |||| |||||||||| |||||    
T  5732595 ggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtc 5732517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 9629357 - 9629435
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||| | ||||||| ||| ||||| |||||||||| ||||||| |||||| |||||||||||| |||||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtc 9629435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 326
Target Start/End: Complemental strand, 853945 - 853811
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 289  Q
    |||||||||||||||  |||||||| ||| ||  |||||||||||| ||||||| |||||| | || ||||| ||||||| || ||  | ||||||||||    
T  853945 cggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtc--ggatacgacatg 853848  T
Q  290 tgtccgacaccgaaatacacctaatccaaagagtgtc 326  Q
    |||||||||  || | || |||||||||| |||||||    
T  853847 tgtccgacatagagacacgcctaatccaatgagtgtc 853811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 7086770 - 7086847
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||| ||||| |||||||||  || ||||||||||||| ||||||| |||||||| |||||||||| |||||    
T  7086770 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 7086847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 9107456 - 9107367
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||||| ||||| ||| || ||||||||||||| ||||||| | |||| | |||||||| ||||||| || ||||||    
T  9107456 cggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgt 9107367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 10294080 - 10294169
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatc-aataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||| | ||||  ||| || |||||||||||| ||||| || ||||||    
T  10294080 cggacacgacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgt 10294169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 333
Target Start/End: Complemental strand, 7977915 - 7977775
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgt 290  Q
    |||||||||| ||| ||||||||| ||| || ||||||||||||| ||||| | |||||| | |||||||| ||||||| || ||  | | || |||| |    
T  7977915 ggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc--ggacacaacatat 7977818  T
Q  291 gtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||||||| ||||| || ||||||| || |||||| |||||||    
T  7977817 gtccgacaacgaaacacgcctaatctaaggagtgttcgtgctt 7977775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 6389693 - 6389795
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagt 266  Q
    |||||||||| |||| | || | ||||||||||||||||||| ||||| ||| || | ||||||||||| ||||| | |||||||| |||||| ||| ||    
T  6389693 ctatgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaatgatataatttagtgtaatcataggt 6389792  T
Q  267 gtc 269  Q
    |||    
T  6389793 gtc 6389795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 8805656 - 8805586
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattat 262  Q
    |||||||||| ||||| |||||||||  || ||||||||||||| ||||||| |||||||| |||||||||    
T  8805656 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 19040341 - 19040407
Alignment:
Q  207 actgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgt 272  Q
    ||||||||| ||| |||||||||||||||| ||||||| |||||| | |||||||||| ||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgt 19040407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 5000712 - 5000659
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||||| |||||||| ||||||||||||| ||||||||||||| || |||||||    
T  5000712 cggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatca 5000659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 10770760 - 10770671
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||| ||||||||||||| | | ||  |||||||||||| ||||||| |||||| | |||||||| ||||||| || ||||||    
T  10770760 cggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 10770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 21395386 - 21395305
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatcaataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||| |||||| |||||| | | |||||||||||||||| |||||  |||||||| |||||||| ||||||| || ||||||    
T  21395386 gacatggacaccgacacgccaacaccgctaataatttgagaaaatacataatttagtgtaattacaagtgtcggtgtcgtgt 21395305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 7265668 - 7265600
Alignment:
Q  202 cggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||| | | |||||||||||||||| ||||||| |||||| | |||||||||| |||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 7265600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 7625088 - 7625168
Alignment:
Q  184 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    |||| |||||||||||||| ||||| |||||||||| || | ||||||||||| ||||| | |||||||| | ||||||||    
T  7625088 cggacatcggacacgacacagacaccgacacgtcgacacggataataatttgagaaaatgatataatttagtataattata 7625168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 8365628 - 8365516
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagt 266  Q
    |||||||||| |||  |||| | | ||||||||||||||||||||||| ||| ||  |||||||||||| || |||| ||||||   |||||||| ||||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagt 8365529  T
Q  267 gtctgtatcgtgt 279  Q
    ||| || ||||||    
T  8365528 gtcggtgtcgtgt 8365516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 20371189 - 20371117
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||| ||||||| ||| |||||||||||||||| ||||||| |||| | ||||| |||||| |||||    
T  20371189 gacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtc 20371117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 10889053 - 10888982
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    ||||||||||| ||||| | || |||||||||||||||| ||||||| |||||||| ||| |||||| ||||    
T  10889053 gacacggacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgtgattatatgtgt 10888982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 16388311 - 16388245
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataa 264  Q
    ||||||||||||||||||||||||  || |||||||||| ||||||| |||||| | |||||||||||    
T  16388311 gacacggacactgacacgtcgata-agcaaataatttgaaaaaatcacataattcagtgtaattataa 16388245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 16833281 - 16833360
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| |||||||||||| ||| ||  |||||||||||| ||||||| ||| || | |||||||| |||||||    
T  16833281 cggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtc 16833360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 30866230 - 30866151
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| ||||| ||||| |||||  | | |||||||||||||||| ||||||| |||||| |||||||||||| |||||    
T  30866230 cggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtc 30866151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 10842518 - 10842584
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||| |||||| ||| |||||||||||||||| ||||||| |||||||| |||||| ||| |||||    
T  10842518 gacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtc 10842584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 31959214 - 31959264
Alignment:
Q  283 cgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||||||||||||||||||  | ||||||||||| | ||||||||||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgctt 31959264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 15489816 - 15489739
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||| ||||||||||| ||||||||| ||  |||||||||||| ||||| | | |||| |||||||||| |||||||    
T  15489816 gacacaacacggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtc 15489739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 25038181 - 25038068
Alignment:
Q  167 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataag 265  Q
    ||||||||||| |||  |||| || | | ||||||| || |||||||||| || |||| ||||||||||| ||||| | |||||||| |||||||| ||     
T  25038181 tctatgaagcacggatacggacattgaatacgacacagatactgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaattacaaa 25038082  T
Q  266 tgtctgtatcgtgt 279  Q
    |||| |||| ||||    
T  25038081 tgtcggtattgtgt 25038068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 301
Target Start/End: Original strand, 28152079 - 28152180
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 296  Q
    |||||||||||||||||| ||| |  ||||||||||||| ||||||| |||||| | |||||||| ||||||| || ||  | | |||||| ||||||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtc--ggacacgacacgtgtccga 28152175  T
Q  297 caccg 301  Q
    |||||    
T  28152176 caccg 28152180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 34073432 - 34073360
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatc-aataatttaatgtaattata 263  Q
    |||||||||||||||||||||| | | | | |||||||||||||| ||||||  |||||| | ||||||||||    
T  34073432 ggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattata 34073360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 28917974 - 28918117
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 289  Q
    ||||||||||||||| ||||||||| ||| |  ||||||||||||| ||||||| |||||| | |||||||| ||||||| || ||||| | |||||| |    
T  28917974 cggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacg 28918073  T
Q  290 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||||||||| |  | || |||||||||| |||||||| |||||    
T  28918074 tgtccgacactgggacacgcctaatccaaggagtgtccctgctt 28918117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 55401048 - 55401189
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 289  Q
    |||| |||||||||||||||| ||| ||| ||  |||||||||||| ||||||| |||||||| |||||||| ||||||| || |||   | |||||| |    
T  55401048 cggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgg--acacgacacg 55401145  T
Q  290 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||||||||||||| | || |||||||| | ||||||||||||||    
T  55401146 tgtccgacaccgagacacgcctaatccgaggagtgtccgtgctt 55401189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 8383206 - 8383309
Alignment:
Q  167 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataag 265  Q
    |||||| |||| |||| |||| |  |||||||||||||||| ||||||| ||| |||||||||||||||| ||||||| |||||| | ||||||||||||    
T  8383206 tctatgtagcacggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataag 8383305  T
Q  266 tgtc 269  Q
    ||||    
T  8383306 tgtc 8383309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 25948966 - 25948895
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||||||||||| | |||||| ||||||||||||| ||||||| |||||| | |||||||||||||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 280
Target Start/End: Complemental strand, 15796394 - 15796290
Alignment:
Q  177 atggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatc 275  Q
    |||||| |||| | ||||||||||||||||| ||||||| ||| || | ||||||||||| ||||||| |||||| | |||||||| || |||| || ||    
T  15796394 atggacacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtc 15796295  T
Q  276 gtgta 280  Q
    |||||    
T  15796294 gtgta 15796290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 25064882 - 25064954
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattat 262  Q
    |||||||||||| |||| ||||||| ||| ||||||||| |||||| ||||||| |||||||| |||||||||    
T  25064882 cggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 14216867 - 14216954
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||||||||||||| ||  |||||||||| | || |||| |||||| | |||||||| ||||||| || ||||||    
T  14216867 gacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgt 14216954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 14222996 - 14223083
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||||||||||||| ||  |||||||||| | || |||| |||||| | |||||||| ||||||| || ||||||    
T  14222996 gacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgt 14223083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 24205127 - 24205048
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||||||||||| ||| || | ||||||||||| ||||| | |||||  | ||||||||||||||||    
T  24205127 cggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc 24205048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 10268567 - 10268493
Alignment:
Q  196 acgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| ||||||||||||| ||| || | ||||||||||| ||||||| |||||||| |||||||| |||||||    
T  10268567 acgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 3164111 - 3164058
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||||||||| || |||||||| || ||||||||||||| |||||||    
T  3164111 cggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatca 3164058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 26492291 - 26492238
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||||||||||||||||| ||| |  ||||||||||||| |||||||    
T  26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatca 26492238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 49505230 - 49505161
Alignment:
Q  201 acggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||| ||||||  || |||||||||||||||| ||||||| |||||||| |||||||||| |||||    
T  49505230 acggacaccgacacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 5441117 - 5441045
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattat 262  Q
    |||||||||||| |||||||||||| ||  |||||||| ||||||| ||||||| |||||| |||| ||||||    
T  5441117 cggacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcacataattcaatggaattat 5441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 279
Target Start/End: Original strand, 9800014 - 9800102
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||||||||| ||||||||||| ||| ||| |||||||||||| ||||| | ||||||   ||||||| |||||||| || ||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgt 9800102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 14832081 - 14832161
Alignment:
Q  200 cacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||| || |||||| |||||| ||||||||||||| ||||||| |||| | |||||||||| ||||||| || ||||||    
T  14832081 cacggatacggacacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgt 14832161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 32804622 - 32804546
Alignment:
Q  195 cacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtct 270  Q
    |||||||||| || ||||| | ||| |||| ||||||||||| ||||||| |||||||| |||||||||| ||||||    
T  32804622 cacgacacgggcattgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtct 32804546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 8587107 - 8587028
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| |||||||||||||||||| ||| ||  ||| |||||||| ||||||| |||||| | |||||||| |||||||    
T  8587107 cggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtc 8587028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 10335372 - 10335293
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||||||||||| ||| ||  |||||||||||| ||| ||| ||| |||| ||||| || |||||||    
T  10335372 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtc 10335293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 11493441 - 11493374
Alignment:
Q  197 cgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    ||||||||||| ||||||||||| ||| |||||||| ||| ||||||| |||||| | ||||||||||    
T  11493441 cgacacggacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaattata 11493374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 23870635 - 23870592
Alignment:
Q  201 acggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||||||| |||||||||| |||||||||||||||| |||||||    
T  23870635 acggacacggacacgtcgacaccgctaataatttgaaaaaatca 23870592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 38731191 - 38731270
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||| | |||| |||| |||||||||||||||||||| | ||||||| |||||| | |||| ||||| |||||    
T  38731191 cggacacgacatgtacaccgacatgtcgataccgctaataattttaaaaaatcacataattcagtgtagttatatgtgtc 38731270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 4466711 - 4466633
Alignment:
Q  166 ttctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||||||||  |||| | |||||| |||||| ||||||||||  ||| |||| ||||||||| | |||||||    
T  4466711 ttctatgaagcatggatacggacaccggacatgacacgaacactgacactccgacaccggtaataatttaagaaaatca 4466633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 6525759 - 6525713
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||||| ||||||||| ||||| |||||||||||||||| |||||||    
T  6525759 gacacgtacactgacatgtcgacaccgctaataatttgagaaaatca 6525713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 2620139 - 2620086
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||||||||| |||||||||||||| ||| ||| ||||| |||||| |||||||    
T  2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatca 2620086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 11665917 - 11666006
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||  ||||| ||||  ||| | |||||||||||||| ||||||| | |||||| |||||||||| ||||| || ||||||    
T  11665917 cggacacgacacacacactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgt 11666006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 14829663 - 14829751
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||| ||||| |||||||||||| ||| || ||||||||||||| ||||||| |||||| |  ||||||| ||||||| || ||||||    
T  14829663 cggacatgacacagacactgacacgccgacacagctaataatttga-aaaatcacataattcatggtaattacaagtgtcggtgtcgtgt 14829751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 268
Target Start/End: Complemental strand, 23184157 - 23184080
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||| ||  ||||||||||||| |||  | ||||||||||||||||||| ||||||  ||||||||||| ||||    
T  23184157 ggacacgatacaaacactgacacgtcaatattgataataatttgacaaaatcatataattctatgtaattatatgtgt 23184080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 4987363 - 4987299
Alignment:
Q  205 acactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    ||||||||||| ||| || ||||||||||||| ||||||| |||||| | |||||||| ||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 4991050 - 4990974
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| ||||||||  ||| |||||||||| ||||| ||||| | |||||| | |||||||| |||||||    
T  4991050 acacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtc 4990974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 12674585 - 12674533
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatcaa 245  Q
    ||||||||||||||| ||||||  ||| || ||||||||||||| ||||||||    
T  12674585 gacacgacacggacattgacacaccgacactgctaataatttgagaaaatcaa 12674533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 15544679 - 15544719
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||||| || |||||||||||||||| |||||||    
T  15544679 gacactgacacgttgacaccgctaataatttgataaaatca 15544719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 22774149 - 22774077
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||| ||||| |||||||||| ||| ||||||||| |||||| ||| ||| || | ||||||||||||||||    
T  22774149 gacacagacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtc 22774077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 29508424 - 29508496
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||| ||||| ||||||  ||||||| |||||||||||| ||||||| |||||| | |||||||||| |||||    
T  29508424 gacatggacattgacacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtc 29508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 20539759 - 20539672
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtg 278  Q
    |||||||||||||||||||||||||||| || ||||||||||||| ||||||| |||||||| |||||||| ||||||| || |||||    
T  20539759 ggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 21616737 - 21616813
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||||||||||| |||||| ||| |||||||||||||||| ||||||| |||||| | |||||||||| ||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 39323244 - 39323316
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||| | |||||||| |||||||    
T  39323244 gacacggacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 37558957 - 37559029
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||||||| ||| || ||||||||||||  ||||||| |||||| |||||||||| |||||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtc 37559029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 23717999 - 23718078
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| |||||||||||||||||  ||| |||||||||||||||| ||| ||| |||||| | |||||||||| |||||    
T  23717999 cggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtc 23718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 24105671 - 24105750
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| |||||||||||||||||  ||| |||||||||||||||| ||| ||| |||||| | |||||||||| |||||    
T  24105671 cggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtc 24105750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 30404936 - 30404857
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| |||||||||||||||||| ||| || | ||||||||||| ||||||| |||||| | |||||||| |||||||    
T  30404936 cggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 30404857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 36756432 - 36756341
Alignment:
Q  189 atcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||| ||||||| |||||||||||||||| ||  ||||||||||||  |||| | |||||| | |||||||||||||||| || ||||||    
T  36756432 atcggatacgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgt 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 28412325 - 28412395
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattat 262  Q
    ||||||||||||||||| ||||||| | |||| ||||||||||| ||||||| |||||| | |||||||||    
T  28412325 gacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 4882784 - 4882703
Alignment:
Q  189 atcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||| ||| |||| || ||||||||||||||||||||||| |||||| ||||| | |||||| | |||||||| |||||||    
T  4882784 atcgggcacaacacagatactgacacgtcgataccgctaattatttgaaaaaatgatataattcagtgtaattacaagtgtc 4882703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 12941019 - 12940950
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaatta 261  Q
    |||||||||||||||||||||||| || ||  |||||||||||| ||||||| |||||| | ||||||||    
T  12941019 gacacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 4763447 - 4763490
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaa 241  Q
    ||||||||||||||||||||| || |||||||||||||| ||||    
T  4763447 gacacggacactgacacgtcgttatcgctaataatttgaaaaaa 4763490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 6940233 - 6940369
Alignment:
Q  196 acgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtcc 294  Q
    |||||||||||||||||||| ||| || ||||||||||| | ||| | | |||||| | |||||||| ||||||| |||||    | |||||| ||||||    
T  6940233 acgacacggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggtatc--cgacacgacacgtgtcc 6940330  T
Q  295 gacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
     ||||| | | |||||||||| || || |||||||||||    
T  6940331 aacaccaagacacacctaatcaaatgattgtccgtgctt 6940369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 15349816 - 15349887
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataa 264  Q
    ||||||||| |||| |||||||||||||| | || |||||| | ||||||| |||||||||| |||||||||    
T  15349816 acacgacacagacaatgacacgtcgatactgttagtaatttaaaaaaatcacataatttaatataattataa 15349887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 15972851 - 15972987
Alignment:
Q  196 acgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtcc 294  Q
    |||||||||||||||||||| ||| ||   ||||||||||| ||||| | | |||| | |||||||| ||||||| || |||   | |||||| ||||||    
T  15972851 acgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcgg--acacgacacgtgtcc 15972948  T
Q  295 gacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||| |||  | ||||||||||| |||| |||||||||||    
T  15972949 gacgccgggacacacctaatccgaagaatgtccgtgctt 15972987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 21782903 - 21782832
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattat 262  Q
    |||||||||||  ||||||||||| ||| || ||||||||||||| ||||||| |||||| | |||||||||    
T  21782903 ggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 31018563 - 31018642
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||| |||||| ||||||||||||| | | |||||||||||||| | ||||||| || ||||| |||||||||| |||||    
T  31018563 cggatacgacatggacactgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtc 31018642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 10548011 - 10547973
Alignment:
Q  196 acgacacggacactgacacgtcgataccgctaataattt 234  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  10548011 acgacacggacactgacacgtcgacaccgttaataattt 10547973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 14996308 - 14996230
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttg-acaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||| |||||||||||||||| | ||| || |||||||||||| | ||||||| |||||||| |||||||| |||||||    
T  14996308 gacatgacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtc 14996230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 31808063 - 31808129
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||  ||| |||||||||||||| ||||||||| |||||| | |||||||||| |||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 36409711 - 36409641
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattat 262  Q
    ||||||||||||| ||| ||| | ||| |||||| ||||||||| ||||||| |||||||| |||||||||    
T  36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcacataatttagtgtaattat 36409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 16069333 - 16069268
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattat 262  Q
    |||||||||||||||||| ||| |||| ||||||||| | ||||||| |||||| | |||||||||    
T  16069333 gacacggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 27286376 - 27286299
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||| ||||||||||| ||| ||| | |||||||||||||| || |||| |||||| | |||||||||| |||||    
T  27286376 gacacgatacggacactgatacgccgacaacgctaataatttgataagatcacataattaagtgtaattataggtgtc 27286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 19536508 - 19536404
Alignment:
Q  167 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttg-acaaaatca-ataatttaatgtaattataa 264  Q
    |||||||||||  ||  |||| | ||||||||||||||||| ||||||| ||| ||  ||||||||||| | ||||||| |||||| | |||||||| ||    
T  19536508 tctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaa 19536409  T
Q  265 gtgtc 269  Q
    |||||    
T  19536408 gtgtc 19536404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 21374778 - 21374706
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| ||||| ||| || ||||||||||||| ||||| | |||||| | |||||||| |||||||    
T  21374778 gacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 23921228 - 23921300
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataa 264  Q
    ||||||| || |||| ||||| |||||||||| ||||||||||| ||||| | |||||| | |||||||||||    
T  23921228 gacacgatacagacattgacaggtcgataccgttaataatttgagaaaattacataattcagtgtaattataa 23921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 333
Target Start/End: Original strand, 13770650 - 13770810
Alignment:
Q  177 atggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatc 275  Q
    |||||| |||| ||||||||||||||||||||||| ||| ||| || ||||||||||| | ||||| | |||||| | |||||||| |||||||  | ||    
T  13770650 atggactcggacatcggacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtc 13770749  T
Q  276 gtgt---atacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||||   | || ||| ||||||||||||| || || |||||||| ||||||||||||||||    
T  13770750 gtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 26733279 - 26733330
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatca 26733330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 5409922 - 5409776
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgac 286  Q
    |||| |||||| |||||||||||||  ||||| ||||||||||||| ||||||| |||||| | || ||||| ||||||| || ||||||   | |||||    
T  5409922 cggatacgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgac 5409823  T
Q  287 atgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    | |||||||||||||  | || |||||||| | ||||||||||||||    
T  5409822 acgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgctt 5409776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 14077517 - 14077441
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||||| ||||||||||||| ||||| |||||| ||||| | |||||||||| ||||||||||||||    
T  14077517 acacgacacggacacttacacgtcgatacccctaattatttgaaaaaataacataatttaatataattataagtgtc 14077441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 14387545 - 14387469
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||||| ||||||||||||| ||||| |||||| ||||| | |||||||||| ||||||||||||||    
T  14387545 acacgacacggacacttacacgtcgatacccctaattatttgaaaaaataacataatttaatataattataagtgtc 14387469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 27944991 - 27945103
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagt 266  Q
    |||||||||| |||  |||| | ||||||||||||||||||||||||| ||| ||| |||||||||||| ||||| | |||||| | |||||||| ||||    
T  27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagt 27945090  T
Q  267 gtctgtatcgtgt 279  Q
    ||| || ||||||    
T  27945091 gtcggtgtcgtgt 27945103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 333
Target Start/End: Complemental strand, 43027554 - 43027409
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgaca 287  Q
    |||||||||||||||||||||||| |||  | ||||||||||||| ||||||| |||||  | ||||| || ||||||| || ||||||   | ||||||    
T  43027554 ggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgaca 43027455  T
Q  288 tgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
     |||||||||||||  | || |||||||| | ||||||||||||||    
T  43027454 cgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgctt 43027409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 24105626 - 24105702
Alignment:
Q  165 attctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaat 242  Q
    ||||||||||||| |||  |||||| ||||||||||||||||||||||||| ||| || ||||||||||||| |||||    
T  24105626 attctatgaagcacggatacggata-cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 5235960 - 5236032
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    ||||||||||| |||||||||||||||| |||||||||||||| | ||||| | |||||||| ||||||||||    
T  5235960 ggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattata 5236032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 7328800 - 7328688
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagt 266  Q
    |||||||||| |||  |||| | || ||||||||| |||| | |||||||||||| ||||||||||||| ||||| | |||||||| |||||||||| ||    
T  7328800 ctatgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataacataatttagtgtaattatatgt 7328701  T
Q  267 gtctgtatcgtgt 279  Q
    ||| || ||||||    
T  7328700 gtcggtgtcgtgt 7328688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 11722191 - 11722131
Alignment:
Q  184 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||| ||||||| |||||||    
T  11722191 cggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatca 11722131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 11061174 - 11061083
Alignment:
Q  179 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||| |||| |||||| |||||||||||||||||||  ||| || ||||||||||||| ||||||| |||||||| | |||||| |||||||    
T  11061174 ggacacggacatcggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtc 11061083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 333
Target Start/End: Original strand, 598183 - 598322
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtg 291  Q
    |||| ||||||||||||||||| |||| |||||||||||||| | |||||||  ||||| ||||||||| |||||||| || ||    | |||||| |||    
T  598183 gacatgacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtc--agacacgacacgtg 598280  T
Q  292 tccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||||||||||  | || |||||||| |  |||||||||||||    
T  598281 tccgacaccgggacacgcctaatccgagaagtgtccgtgctt 598322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 17851404 - 17851486
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgt 272  Q
    ||||||||||| ||| || ||||| ||||||||||||||||||| | ||||||| |||||| | |||||||||| ||||||||    
T  17851404 cggacacgacatggataccgacacatcgataccgctaataattttagaaaatcacataattcagtgtaattatatgtgtctgt 17851486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 42720963 - 42720897
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||| || |||||||||||||||| ||||||| |||||| |||||||||||| |||||    
T  42720963 gacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtc 42720897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 333
Target Start/End: Original strand, 1433430 - 1433573
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgacatg 289  Q
    |||||||||||||| ||||||| ||| |||| ||||||||||| ||||||| || ||||  |||||||||| ||||| || ||||||   | | ||||||    
T  1433430 acacgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcggacaagacatg 1433529  T
Q  290 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||||||||||   | ||  ||||||| | ||||||||||||||    
T  1433530 tgtccgacaccaggacacgtctaatccgaggagtgtccgtgctt 1433573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 10042915 - 10043000
Alignment:
Q  196 acgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgta 280  Q
    |||||||||||||| ||||| ||| ||| |||||||||||| ||| ||| ||||||||  ||||||||||||||| || |||||||    
T  10042915 acgacacggacacttacacgccgacaccactaataatttgataaattcacataatttagcgtaattataagtgtcagtgtcgtgta 10043000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 24339615 - 24339704
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||| ||||| ||||||| ||| || ||||||||||||| ||||||| |||||| | |||||||| ||||||| || ||||||    
T  24339615 cggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 24339704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 4793835 - 4793887
Alignment:
Q  190 tcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaat 242  Q
    ||||||||||||| ||||||||||||||||||| |||||||| |||| |||||    
T  4793835 tcggacacgacacagacactgacacgtcgatacagctaataacttgaaaaaat 4793887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 5956248 - 5956324
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatcaa-taatttaatgtaattataagtgt 268  Q
    ||||||||| ||| ||||||||| ||||||  |||||||||| | |||||||| |||||||||||||||||| ||||    
T  5956248 gacacgacatggatactgacacgccgatactcctaataatttaaaaaaatcaaataatttaatgtaattatatgtgt 5956324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 15902795 - 15902874
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| |||||||||| | ||| |||  ||||||||||| ||||||| |||||||| |||||||||| |||||    
T  15902795 cggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtc 15902874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 25481868 - 25482016
Alignment:
Q  184 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtata 282  Q
    |||| ||||||||| ||| ||||| ||||||| ||| || ||||||||||||| ||||||| |||||| | |||||||| ||||||  || ||  | | |    
T  25481868 cggacatcggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtc--ggaca 25481965  T
Q  283 cgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||| ||||||||||||  |||| || | |||| |||||||| |||||||||    
T  25481966 cgatatgtgtccgacattgaaacacgcttaattcaaagagtatccgtgctt 25482016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 19206016 - 19206102
Alignment:
Q  184 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| | ||||||||||||||||  ||||| ||| |||||||||||||||| ||||||| |||||| | | |||||||| |||||    
T  19206016 cggataccagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtc 19206102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 6028586 - 6028687
Alignment:
Q  179 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgt 277  Q
    |||| |||| ||| |||||||||| ||||||||||| ||||||  | ||||||||||| || || | ||||||||||||||||| || |||| || ||||    
T  6028586 ggacacggacatcagacacgacacagacactgacacatcgatatggttaataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgt 6028685  T
Q  278 gt 279  Q
    ||    
T  6028686 gt 6028687  T

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Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 333
Target Start/End: Original strand, 15680789 - 15680923
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 296  Q
    |||| ||||||||||||| ||| |  ||||||||||  | ||||||| |||||||| |||||||||||||||| || ||  | | |||||| ||||||||    
T  15680789 gacatggacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtc--ggacacgacacgtgtccga 15680886  T
Q  297 caccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||||| | ||  ||||| | | ||||||||||||||    
T  15680887 caccgagacacgtctaattcgaggagtgtccgtgctt 15680923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 275
Target Start/End: Original strand, 22868015 - 22868100
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatc 275  Q
    ||||||| |||| |||||||||||| ||| ||| |||||||| ||| ||||||| |||||| | |||||||||| ||||| |||||    
T  22868015 cggacacaacaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtcagtatc 22868100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 32308105 - 32308182
Alignment:
Q  203 ggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||| ||| |||||||||||||||| ||||||| |||||| | ||||||| || ||||| || ||||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgt 32308182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 266
Target Start/End: Original strand, 1401007 - 1401074
Alignment:
Q  200 cacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagt 266  Q
    ||||||||||||||||  |||| |||||||||||||| ||| ||| |||||| | |||||||||||||    
T  1401007 cacggacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaattataagt 1401074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 43249966 - 43250045
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| |||||||||||||||||| ||| || | ||||||||||| ||||| | |||||  | ||||||||||||||||    
T  43249966 cggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc 43250045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 279
Target Start/End: Original strand, 49107795 - 49107882
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatcaataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||| |||||||  ||| |||||||||||||||| ||||   |||||| | ||| |||||| ||||| || ||||||    
T  49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaacacataattgagtgtgattatatgtgtcggtgtcgtgt 49107882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 2034392 - 2034481
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgta 257  Q
    |||||||||| |||  |||||| | ||||||||||||| ||| ||||||||| ||| |||||||||||| || |||| |||||||| ||||    
T  2034392 ctatgaagcacggatacggata-ctgacacgacacggatacttacacgtcgacaccactaataatttgagaatatcatataatttagtgta 2034481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 4017879 - 4017801
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||| |||||| ||| || | ||||||||||| ||||  | |||||||| |||||| |||||||||    
T  4017879 ggacacgacacggacaccgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtc 4017801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 1656643 - 1656680
Alignment:
Q  177 atggacccggatatcggacacgacacggacactgacac 214  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  1656643 atggacacggatatcggacacgacacggacaccgacac 1656680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 35861971 - 35862024
Alignment:
Q  225 ctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgt 277  Q
    |||||||||||| ||||||| |||||| ||||||||| ||||||||||| ||||    
T  35861971 ctaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 3721070 - 3721145
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||||||  |||| |  ||||||||||||| ||||||| |||||||| | |||||||| |||||    
T  3721070 acacgacacggacactgacatttcgaca-tgctaataatttgagaaaatcacataatttagtataattatatgtgtc 3721145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 21141065 - 21140989
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||| | |||||||||| ||| |||||||||| | ||||||| |||||| | ||| |||||| |||||    
T  21141065 acacgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattataggtgtc 21140989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 21864777 - 21864860
Alignment:
Q  189 atcggacacgacacggacactgacacgtcgataccgctaataatttg--acaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||||||||| |||||   || || ||||||||||||  | ||||||| |||||||| |||||||| |||||||    
T  21864777 atcggacacgacacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtc 21864860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 29787447 - 29787383
Alignment:
Q  199 acacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattat 262  Q
    ||||||||| | ||||| ||| |||||||||||||||| ||||||| |||||| | |||||||||    
T  29787447 acacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 8771 - 8912
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 289  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||| ||||||| || ||||| |||||||| ||||||| || ||  | | |||||| |    
T  8771 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtc--ggacacgacacg 8868  T
Q  290 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||||||||||||| | || |||||||  | |||| |||||||||    
T  8869 tgtccgacaccgagacacgcctaatctgaggagtctccgtgctt 8912  T

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Target: scaffold0003 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 241567 - 241656
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||  ||||||| |||||||| ||||||||| |||||| || ||||||    
T  241567 cggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgt 241656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 22651949 - 22652038
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||| ||||||| |||||| ||| |||||| ||||||| || ||||||    
T  22651949 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgt 22652038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 279
Target Start/End: Complemental strand, 2572141 - 2572053
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||||||||||| || |||||||||| ||  |||||||||||| ||||||| |||||||| |||||||| ||||||| || ||||||    
T  2572141 ggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgt 2572053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 15816205 - 15816126
Alignment:
Q  201 acggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||| ||| ||  |||||||||||| ||||||| |||||||| |||||||||||||||| || ||||||    
T  15816205 acggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 15816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 20873042 - 20873121
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||||||||||| ||| |  | ||||||||||| ||||||| |||||||| |||||||| |||||||    
T  20873042 cggacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtc 20873121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 36934646 - 36934721
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||||||||||| ||||||||| ||||||||||||| || ||||||| |||||| | |||||||||| ||||    
T  36934646 acacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtgt 36934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 29510390 - 29510337
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||| |||||||    
T  29510390 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatca 29510337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 34897068 - 34897137
Alignment:
Q  201 acggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||| |||||||||| |||||||||||||||| ||||||| |||||| | |||||||||| |||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 34897137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 4298972 - 4298893
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| || ||| ||||| ||| || | ||||||||||| ||||||| ||||||||||||||||| |||||||    
T  4298972 cggacacgacacagatactaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtc 4298893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 13018256 - 13018323
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaat 259  Q
    ||||| |||| |||||| ||||||| |||||| ||||||||||||||||||| |||||||| ||||||    
T  13018256 gacacaacacagacactaacacgtcaataccgttaataatttgacaaaatcacataatttagtgtaat 13018323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 25192440 - 25192354
Alignment:
Q  184 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||| ||| | | |||||| | | ||||||||||||||    
T  25192440 cggacatcggacacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtc 25192354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 8343287 - 8343368
Alignment:
Q  189 atcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||| ||||| |||||  ||| |  ||||||||||||| ||||||| |||||||| |||||||| |||||||    
T  8343287 atcggacacgacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 13437074 - 13436997
Alignment:
Q  167 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||| ||||  ||| | |||||| |||| ||||||||||||| ||| || ||||||||||||| |||||||    
T  13437074 tctatgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatca 13436997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 4673518 - 4673458
Alignment:
Q  184 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||| |||||||||||||| |||||||||||| ||| || | ||||||||||| |||||||    
T  4673518 cggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatca 4673458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 20785521 - 20785469
Alignment:
Q  221 accgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgt 272  Q
    ||||||||||||||||  |||||| ||||||||||||||||||| ||||||||    
T  20785521 accgctaataatttgaggaaatcacataatttaatgtaattatatgtgtctgt 20785469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 39954352 - 39954292
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    ||||| |||||| ||| |||||||||||||||| ||||||| |||||||| ||||||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattata 39954292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 22197828 - 22197749
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| |||||| ||||| | | || ||||||||||||| ||| ||| |||||||| |||||||| |||||||    
T  22197828 cggacacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 24362288 - 24362209
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||| ||||||| ||||| |||||| ||| |||||||||||||||| | ||||| |||||| | |||||||||| |||||    
T  24362288 cggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 24669379 - 24669485
Alignment:
Q  163 gaattctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaatta 261  Q
    ||||||||| |||||||||  |||| | |||||||||||| ||||||||||||  || |||| |||||||||||  |||| | |||||| | ||||||||    
T  24669379 gaattctataaagcatggatacggaca-cggacacgacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaatta 24669477  T
Q  262 taagtgtc 269  Q
     |||||||    
T  24669478 caagtgtc 24669485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 27213520 - 27213599
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||| || |||||| ||| || ||||||||||| | ||||||| |||||| | |||||||||| |||||    
T  27213520 cggacacgacacggatacagacacgccgacactgctaataatttcagaaaatcacataattcactgtaattatatgtgtc 27213599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 31109597 - 31109550
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatcaa 245  Q
    |||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  31109597 gacacggacactgacacgccgacaccgttaataatttgagaaaatcaa 31109550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 41838207 - 41838156
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||| ||||||||||||||||||| || ||||||||||| | |||||||    
T  41838207 gacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatca 41838156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 4498342 - 4498417
Alignment:
Q  256 taattataagtgtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||||||||||||| || |||  ||||  |||||| ||||||||||||| ||||||||||  | ||||||||||||||    
T  4498342 taattataagtgtcggtgtcgaatata--acatgtatccgacaccgaaacacacctaatcagaggagtgtccgtgctt 4498417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 20679468 - 20679402
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||| ||||| ||| |||||||||||| ||||||| ||| || | ||||||||||||||||    
T  20679468 gacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtc 20679402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 29776013 - 29776062
Alignment:
Q  195 cacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||||| ||||| ||||| || ||||||||||||| |||||||    
T  29776013 cacgacacggacattgacaagtcgacactgctaataatttgagaaaatca 29776062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 926874 - 926822
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatc 243  Q
    ||||||||||||||||||||||||| | | ||  |||||||||||| ||||||    
T  926874 cggacacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 3677752 - 3677832
Alignment:
Q  184 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    |||||||| ||||||||||||| |||||||| |||| ||   ||||||||| | ||||||| ||||||  |||||||||||    
T  3677752 cggatatcagacacgacacggatactgacacatcgacacaattaataattttaaaaaatcacataattctatgtaattata 3677832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 28642358 - 28642426
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttga 236  Q
    |||||||||| |||  |||| ||||||||||||||||||| |||||| | || || | |||||||||||    
T  28642358 ctatgaagcacggatacggacatcggacacgacacggacaatgacacattgacacggttaataatttga 28642426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 29357949 - 29358029
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataa-tttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||  |||||||| |||||||||| | |||||| ||||| ||| ||| ||||||||||||| ||||| |||||    
T  29357949 cggacacgacatagacactgatacgtcgatactgttaataattttgaaaaactcacataatttaatgtatttatatgtgtc 29358029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 31236644 - 31236584
Alignment:
Q  210 gacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||| ||| || ||||||||||||| ||||||| |||||| |||||||||||| |||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtc 31236584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 44505184 - 44505140
Alignment:
Q  226 taataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||    
T  44505184 taataattttacaaaataatataatttaatgtaattataagtgtc 44505140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 44081665 - 44081584
Alignment:
Q  189 atcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||| ||||||||||||  ||||| || ||||||||||| ||||||| ||||||||||||||||||| |||||    
T  44081665 atcggacacgacaaggacactgacacaccgatatcgttaataatttgaaaaaatcatataatttaatgtaattatatgtgtc 44081584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 23293072 - 23292931
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 289  Q
    ||||||||||||||||| ||||||| ||| || ||||||||||||| ||||||| |||||| | | |||||| ||||||| || ||  | | |||||| |    
T  23293072 cggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc--ggacacgacacg 23292975  T
Q  290 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||||||||||||  | || |||||||| | ||||||||||||||    
T  23292974 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgctt 23292931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 30838185 - 30838272
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||| |||||||||||| |||||||||| ||||||||||||| ||||| | |||||||| ||||||||||||| || || ||||||    
T  30838185 gacacggcacggacactgatacgtcgatactgctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgt 30838272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 20633460 - 20633534
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatcaataatttaatgtaattataagtgtc 269  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| ||||   |||||| |||||||||| |||||||    
T  20633460 gacacgatacggacactgacacgtcgacaccgctaataatttgaaaaaa--cataattcaatgtaattacaagtgtc 20633534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 28084494 - 28084638
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttg-acaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacat 288  Q
    |||||||||||| ||| |||||||| ||| || ||||| |||||| | ||||||| |||||| |||||||||| |||||||||| ||||||    ||||     
T  28084494 cggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtcggtgacac 28084593  T
Q  289 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    ||||||||||| |  | || |||||||| | ||||||||||||||    
T  28084594 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgctt 28084638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 20521933 - 20521882
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  20521933 gacacgacacggacactgacacgccgataccgataataatttgataaaatca 20521882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 3947852 - 3947706
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgac 286  Q
    ||||||| |||| ||||| |||| | ||| || ||||||||||||| ||||||  |||||| | |||||||| ||||||| || ||||||   | |||||    
T  3947852 cggacaccacacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgac 3947753  T
Q  287 atgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    | ||||||||||||   | ||||||||||| | ||||||||||||||    
T  3947752 acgtgtccgacaccaggacacacctaatccgaggagtgtccgtgctt 3947706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 847924 - 847975
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaat 242  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||| |||||    
T  847924 cggacacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 35158071 - 35157992
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||| ||||||||||||||||| |||  |  |||||||||||  ||||||| |||||||| ||||||||||||||||    
T  35158071 cggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtc 35157992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 30982961 - 30982812
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------a 280  Q
    |||| ||||||||||||| |||||| |   ||||||||| |||||| ||||||| ||| || | |||||||||||||||| || ||||||         |    
T  30982961 cggatacgacacggacacagacacgcc---accgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcaga 30982865  T
Q  281 tacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
     |||||| |||||||||||||  | || |||||||||||||||||||||||||    
T  30982864 cacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgctt 30982812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 36635297 - 36635375
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||||| |||||||||||||| | | ||| |||||||||||| ||||||| |||||| | |||||||||| ||||    
T  36635297 cggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 40481610 - 40481687
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||||||| |||||||||||| ||||||  |||||||||||| ||||||| |||||| | |||||||| ||||||    
T  40481610 cggacacgacactgacactgacacgccgatacaactaataatttga-aaaatcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 27706261 - 27706185
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    ||||||||| ||||||||||||||||| ||   ||||||||| | ||||||| |||||||| |||||||| ||||||    
T  27706261 gacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 35723470 - 35723391
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaat-ca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||| | ||||||||||| ||| |||||||||||||||| ||||| || |||||| |||||||||||| |||||    
T  35723470 cggacacgacatg-acactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtc 35723391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 4383351 - 4383429
Alignment:
Q  201 acggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||||||||  |||||||||||| ||||||| |||||| | |||||||| || |||| || ||||||    
T  4383351 acggacactgacacgtcgatacaactaataatttga-aaaatcacataattcagtgtaattacaaatgtcagtgtcgtgt 4383429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 11651218 - 11651167
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||| ||||||||||||||||||| || ||||||||||| | |||||||    
T  11651218 gacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatca 11651167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 22440684 - 22440613
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattata 263  Q
    ||||||||| ||||||||| || |||| |||| ||||||||||| ||||||| |||||| | ||||||||||    
T  22440684 gacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattata 22440613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 33950117 - 33950188
Alignment:
Q  199 acacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||| |||||||||| || |  ||||||||||||||| ||||||| ||||||||||||||| ||| |||||    
T  33950117 acacgaacactgacacttcaacgccgctaataatttgagaaaatcacataatttaatgtaatcatatgtgtc 33950188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 35161099 - 35161150
Alignment:
Q  282 acgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||||| ||||||||||||| || ||||||||||| || |||||||||||||    
T  35161099 acgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgctt 35161150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 12895194 - 12895113
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||| |||||| ||| || ||||||||||||| ||||||| |||||| || ||||||| ||||||| || ||||||    
T  12895194 gacacggacac-gacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgt 12895113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 14126196 - 14126118
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||| |||||| ||||| ||| || | ||||||||||| ||| ||| |||||| | ||||||||||||||||    
T  14126196 ggacacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 31800563 - 31800477
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatcaa-taatttaatgtaattataagtgtctgtatcgt 277  Q
    ||||| |||||| |||| |||||  ||| || ||||||||||| | ||||| || |||||||||||||||| ||||||| |||||||    
T  31800563 ggacatgacacgaacaccgacacaccgacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcggtatcgt 31800477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 12077808 - 12077869
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaa 258  Q
    |||||| ||||||||||||| |||| | ||||||||||| ||||||| |||||| |||||||    
T  12077808 gacacgaacactgacacgtcaatactgttaataatttgagaaaatcacataattcaatgtaa 12077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 12895360 - 12895219
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 289  Q
    |||| |||||||| ||| ||||||| ||| ||   ||||||||||| ||||||| |||||||  |||||||||||||||| || ||  | | ||||||||    
T  12895360 cggatacgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtc--ggacacgacatg 12895263  T
Q  290 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    | ||||||| ||  | || |||||||| | |||||| |||||||    
T  12895262 tatccgacatcgggacacgcctaatccgaggagtgttcgtgctt 12895219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 279
Target Start/End: Complemental strand, 16303351 - 16303263
Alignment:
Q  192 ggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||||| ||||||||||||||| ||| |  | ||||| ||||| ||||| | |||||||| |||||||| ||||||| || ||||||    
T  16303351 ggacacgatacggacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcgtgt 16303263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 49430998 - 49431078
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttg-acaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||| |||||| ||||||| ||| || |||||||||||| | ||||||| |||||| | |||||||| |||||||    
T  49430998 cggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtc 49431078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 22013363 - 22013461
Alignment:
Q  167 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataa 264  Q
    ||||||||||| |||  |||| | ||||||||||||||||||||||||| ||| || ||||||||||||  ||||| | |||||||| |||||||||||    
T  22013363 tctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaattataa 22013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 19820503 - 19820403
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatcaataatttaatgtaattataagtg 267  Q
    |||||||||| |||  |||| | ||||||||||||||||||||||||  ||| |||||||||||||||| |||||| |||||| | |  |||||||||||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatc-ataattaagtacaattataagtg 19820405  T
Q  268 tc 269  Q
    ||    
T  19820404 tc 19820403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 14674249 - 14674321
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||||||| ||| || ||||||||||||| ||||||| |||||||| |||||||| |||||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 14674321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 21191142 - 21191001
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 289  Q
    ||||||||||||||||||||||| | ||| || ||||||||||||| ||||||| |||||| | |||||||| ||||||| || ||  | | || ||| |    
T  21191142 cggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc--ggacacaacacg 21191045  T
Q  290 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||||||| |||  | || |||||||| | ||||||||||||||    
T  21191044 tgtccgactccgggacacgcctaatccgaggagtgtccgtgctt 21191001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 6326395 - 6326304
Alignment:
Q  179 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||| |||||| ||||||||||||||||||||||||| ||| | ||||| |||||||| ||||| | |||||| | |||||||| |||||||    
T  6326395 ggacacggataccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 27144443 - 27144518
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgt 272  Q
    ||||| |||||||||||| ||| ||||||||||||||||  |||||| |||||||| |||||||||| ||||||||    
T  27144443 gacacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtctgt 27144518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 13287485 - 13287396
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||||| ||||||||| || | ||||||||||| ||||||| |||||| | ||||| || ||||||| || ||||||    
T  13287485 cggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgt 13287396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 30098310 - 30098385
Alignment:
Q  202 cggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcg 276  Q
    |||||||||||||| ||| |||| ||||||||||| ||||||| |||||| ||||||||||||  |||| ||||||    
T  30098310 cggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcg 30098385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 5468051 - 5467985
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||||| |||||| ||||||||||| ||||||| |||||| | |||||||||| |||||    
T  5468051 gacactgacacgtcaataccgataataatttgataaaatcacataattcagtgtaattataggtgtc 5467985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 331
Target Start/End: Original strand, 21522723 - 21522873
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------a 280  Q
    ||||||||||||||||||||||||| ||| || ||||||||||| | ||||| | |||||| | |||||||| || |||| || ||||||         |    
T  21522723 cggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcgga 21522822  T
Q  281 tacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgc 331  Q
     |||||| ||||||| |||||  | || |||||||||||||||||||||||    
T  21522823 cacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgc 21522873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 331
Target Start/End: Original strand, 21533289 - 21533439
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------a 280  Q
    ||||||||||||||||||||||||| ||| || ||||||||||| | ||||| | |||||| | |||||||| || |||| || ||||||         |    
T  21533289 cggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcgga 21533388  T
Q  281 tacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgc 331  Q
     |||||| ||||||| |||||  | || |||||||||||||||||||||||    
T  21533389 cacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgc 21533439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 31084309 - 31084375
Alignment:
Q  204 gacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||||||| ||| || ||||||||||||| ||||||| |||||| |||||||||| |||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtc 31084375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 333
Target Start/End: Original strand, 39698524 - 39698666
Alignment:
Q  201 acggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------atacgacatgt 290  Q
    |||||||||||||||  || || ||||||||||||| ||||||| |||||| | |||||||| ||||||| || ||||||         | |||||||||    
T  39698524 acggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgt 39698623  T
Q  291 gtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
     ||||||||||| | || |||||||| | ||||||||||||||    
T  39698624 atccgacaccgagacacgcctaatccgaggagtgtccgtgctt 39698666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 15410532 - 15410491
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataattt 234  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataattt 15410491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 19579682 - 19579763
Alignment:
Q  199 acacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||| ||| ||| || ||||||||||||| ||||||| |||||||| || ||||| ||||||| || ||||||    
T  19579682 acacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgt 19579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 6247595 - 6247674
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||| ||| ||||||||||| ||| ||  |||||||||||| ||||||| |||||| | |||||||| |||||||    
T  6247595 cggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 6247674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 36642848 - 36642769
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||||||||||| ||| || | ||||||||||| ||| | | ||| |||| ||||| ||||||||||    
T  36642848 cggacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtc 36642769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 43001780 - 43001851
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||||||||||| ||||| || ||||||||||||| ||||| | |||||| | |||||||| ||||||    
T  43001780 gacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 7175098 - 7175052
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    ||||||||||||||||| |||| |||| ||||||||||| |||||||    
T  7175098 gacacggacactgacacatcgacaccgttaataatttgagaaaatca 7175052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 15382450 - 15382500
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaa 241  Q
    ||||||||||||||||| ||||||| ||| || ||||||||||||| ||||    
T  15382450 cggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 19552626 - 19552576
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||||||||||||||||||||| ||| || | ||||||||||| |||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatca 19552576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 23012461 - 23012415
Alignment:
Q  224 gctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  23012461 gctaataatttgagaaaatcatataatttaatgtaattatatgtgtc 23012415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 24906387 - 24906301
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcg 276  Q
    ||||||||||||| ||||||||||| | | || | ||||||||||| ||||| | |||||| | |||||||| ||||||| ||||||    
T  24906387 cggacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtatcg 24906301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 3966488 - 3966565
Alignment:
Q  203 ggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||| | ||| |||||||||||||||| ||||||| | |||| | |||||||||| ||||| || ||||||    
T  3966488 ggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgt 3966565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 14422877 - 14422951
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagt 266  Q
    ||||||||||| ||||||||||||  |||||| |||||||||||   ||||||| |||||| | |||||||||||||    
T  14422877 cggacacgacaaggacactgacacaccgatacagctaataattt--aaaaatcacataattcagtgtaattataagt 14422951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 17123009 - 17123074
Alignment:
Q  179 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||| |||| ||||||||  ||| ||||||||||||| | | |||||||||||||||| |||||||    
T  17123009 ggacacggacatcggacataacatggacactgacacgccaacaccgctaataatttgagaaaatca 17123074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 16203874 - 16203802
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatc-aataatttaatgtaattataagtgtc 269  Q
    |||||||||||| ||| | ||| || ||||||||||||| ||||||  |||||||| |||||||||| |||||    
T  16203874 gacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtc 16203802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 42488136 - 42488068
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaatta 261  Q
    ||||||||| |||||||||||||||| |||| | ||||||| | ||||| | |||||| ||||||||||    
T  42488136 acacgacacagacactgacacgtcgacaccgttgataatttaataaaattatataattcaatgtaatta 42488068  T

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Target: scaffold0223 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 20145 - 20234
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||||||||| ||||||| ||| || ||||||||||||| ||||||| |||||| | |||||||| ||||||| || ||||||    
T  20145 cggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 20234  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 225354 - 225275
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||||||||||| ||| || | ||||||||||| ||||| | |||||  ||||||||||||||||||    
T  225354 cggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtc 225275  T

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Target: scaffold0652 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 333
Target Start/End: Complemental strand, 545 - 407
Alignment:
Q  194 acacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgt 292  Q
    ||||| |||||||||||| ||| ||| || ||||||||||||| ||||||| | |||| | |||||||| ||||||| || ||  | | |||||  ||||    
T  545 acacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc--ggacacgacgcgtgt 448  T
Q  293 ccgacaccgaaatacacctaatccaaagagtgtccgtgctt 333  Q
    |||||||||  | ||||||||||| | ||||||||||||||    
T  447 ccgacaccgggacacacctaatccgaggagtgtccgtgctt 407  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 178905 - 178825
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca--ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||||||||||||| ||| ||  |||||||||||| |||||||  |||||| | |||||||| |||||||    
T  178905 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

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Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 192333 - 192253
Alignment:
Q  193 gacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgt 272  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||| ||||| | ||||||   |||||||| ||||||||||    
T  192333 gacacgatacggacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtgtctgt 192253  T

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Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 279
Target Start/End: Complemental strand, 263453 - 263369
Alignment:
Q  196 acgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||||||||||||||| ||| | || ||||||||||||| |||| || |||||| | |||||||||||||||| || ||||||    
T  263453 acgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgt 263369  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 51791 - 51862
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||||||||||||| ||| || ||||||||||||| ||||||| |||||| | |||||||| ||||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

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Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 46643 - 46726
Alignment:
Q  179 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaatta 261  Q
    |||| |||| ||||||||||||||||||| ||||||| ||| || | ||||||||||| ||||||| |||||| | ||||||||    
T  46643 ggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

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Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 19549 - 19626
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    |||||||||||| |||||||||||| ||||||  |||||||||||| ||||||| |||||| | |||||||| ||||||    
T  19549 cggacacgacactgacactgacacgccgatacaactaataatttga-aaaatcacataattcagtgtaattacaagtgt 19626  T

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Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 53170 - 53232
Alignment:
Q  208 ctgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    |||||||| ||||||||| |||||||||| ||||||| |||||| | ||||||||||||||||    
T  53170 ctgacacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtc 53232  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 92790 - 92859
Alignment:
Q  201 acggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||||||||||||| ||| |||||||||||||||| ||||| | |||||| | |||||||| |||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 23393 - 23482
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    |||||||||||| |||||||||||| ||| || | |||||| |  | ||||||| |||||| | |||||||||||||||| || ||||||    
T  23393 cggacacgacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 23482  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 8639 - 8728
Alignment:
Q  191 cggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 279  Q
    ||||||||||| ||||||||||||||||| ||  ||||||||||   ||||||| ||| || | | |||||||||||||| || ||||||    
T  8639 cggacacgacatggacactgacacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcgtgt 8728  T

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Target: scaffold0722 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 7108 - 7040
Alignment:
Q  201 acggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgt 268  Q
    ||||||||||| ||||||| || ||||||||||||| ||||| | |||||||| | |||||| ||||||    
T  7108 acggacactgatacgtcgacacagctaataatttgaaaaaattacataatttagtataattacaagtgt 7040  T

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Target: scaffold0598 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 8132 - 8088
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaat 242  Q
    ||||||||||| ||||||||||||| | ||||||||||| |||||    
T  8132 gacacggacaccgacacgtcgatacggataataatttgagaaaat 8088  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 13350 - 13426
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||||||||| |||  |||| | |||| | |||||||||||||||||| ||| ||  |||||||||||| |||||||    
T  13350 ctatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatca 13426  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 21977 - 21901
Alignment:
Q  168 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgacaaaatca 244  Q
    |||||||||| |||  |||| | |||| | |||||||||||||||||| ||| ||  |||||||||||| |||||||    
T  21977 ctatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatca 21901  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 26373 - 26445
Alignment:
Q  198 gacacggacactgacacgtcgataccgctaataatttgacaaaatca-ataatttaatgtaattataagtgtc 269  Q
    ||||| |||| ||||||||||| ||| |||||||||||| ||||||| |||||| |||||  ||||| |||||    
T  26373 gacacagacagtgacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtgtc 26445  T

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Target: scaffold0083 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 45621 - 45589
Alignment:
Q  187 atatcggacacgacacggacactgacacgtcga 219  Q
    ||||||||||| |||||||||||||||||||||    
T  45621 atatcggacacaacacggacactgacacgtcga 45589  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 63737 - 63797
Alignment:
Q  183 ccggatatcggacacgacacggacactgacacgtc-gataccgctaataatttgacaaaat 242  Q
    ||||||| |||| |||||||||||| |||||||||  | |||||||||||||||| |||||    
T  63737 ccggataccggatacgacacggacaatgacacgtctaacaccgctaataatttgagaaaat 63797  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 68224 - 68180
Alignment:
Q  285 acatgtgtccgacaccgaaatacacctaatccaaagagtgtccgt 329  Q
    |||| ||| |||||| ||||||||||||||||||||| |||||||    
T  68224 acatatgttcgacactgaaatacacctaatccaaagaatgtccgt 68180  T

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