View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18223_low_15 (Length: 285)

Name: NF18223_low_15
Description: NF18223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18223_low_15
NF18223_low_15
[»] chr8 (41 HSPs)
chr8 (1-166)||(6599168-6599333)
chr8 (1-166)||(6674621-6674786)
chr8 (1-166)||(30143539-30143708)
chr8 (3-164)||(41366420-41366584)
chr8 (1-166)||(4731857-4732026)
chr8 (2-166)||(5689467-5689635)
chr8 (1-166)||(15212985-15213155)
chr8 (2-166)||(40321276-40321442)
chr8 (1-166)||(12702431-12702603)
chr8 (2-166)||(18105876-18106043)
chr8 (3-149)||(42498396-42498546)
chr8 (2-166)||(1345176-1345343)
chr8 (167-270)||(14750281-14750384)
chr8 (3-151)||(44304057-44304208)
chr8 (3-166)||(33352351-33352518)
chr8 (2-149)||(27811478-27811631)
chr8 (3-148)||(34254149-34254297)
chr8 (1-175)||(43036622-43036800)
chr8 (3-148)||(34256325-34256473)
chr8 (1-168)||(4733905-4734077)
chr8 (2-166)||(4743027-4743186)
chr8 (3-147)||(17982855-17983002)
chr8 (4-167)||(10015277-10015444)
chr8 (2-166)||(19491503-19491670)
chr8 (2-162)||(3303474-3303642)
chr8 (3-151)||(1746034-1746185)
chr8 (3-151)||(19945174-19945325)
chr8 (3-166)||(8153984-8154147)
chr8 (3-166)||(32901989-32902152)
chr8 (21-166)||(4162684-4162832)
chr8 (3-147)||(31218459-31218606)
chr8 (3-167)||(2627941-2628109)
chr8 (28-168)||(8965490-8965629)
chr8 (2-78)||(18142014-18142090)
chr8 (4-124)||(1292311-1292434)
chr8 (86-167)||(29796130-29796209)
chr8 (7-78)||(3051019-3051090)
chr8 (2-168)||(11711803-11711968)
chr8 (2-160)||(3073686-3073846)
chr8 (94-166)||(7493284-7493352)
chr8 (2-63)||(30291804-30291865)
[»] chr2 (39 HSPs)
chr2 (2-166)||(723547-723714)
chr2 (2-166)||(34139573-34139740)
chr2 (2-166)||(42362546-42362713)
chr2 (1-166)||(24885785-24885953)
chr2 (2-166)||(14633628-14633795)
chr2 (1-168)||(2334216-2334386)
chr2 (2-164)||(11067501-11067667)
chr2 (3-166)||(33162254-33162421)
chr2 (3-166)||(36987875-36988042)
chr2 (2-166)||(14202224-14202391)
chr2 (1-166)||(17057169-17057338)
chr2 (1-166)||(17085152-17085321)
chr2 (1-158)||(38312439-38312600)
chr2 (3-166)||(6594804-6594971)
chr2 (2-168)||(11151393-11151563)
chr2 (2-166)||(39285035-39285202)
chr2 (3-166)||(29868070-29868237)
chr2 (3-148)||(5723074-5723222)
chr2 (2-166)||(36773758-36773926)
chr2 (2-166)||(36317813-36317981)
chr2 (1-166)||(11690697-11690856)
chr2 (3-151)||(36205480-36205631)
chr2 (2-166)||(11049750-11049912)
chr2 (3-147)||(4484147-4484294)
chr2 (3-147)||(45099956-45100103)
chr2 (2-166)||(2838146-2838313)
chr2 (3-168)||(32289770-32289939)
chr2 (3-147)||(4502952-4503099)
chr2 (2-164)||(13121962-13122124)
chr2 (4-123)||(26353381-26353495)
chr2 (2-124)||(12123434-12123557)
chr2 (2-170)||(17489954-17490120)
chr2 (3-147)||(30833550-30833697)
chr2 (2-69)||(1345663-1345730)
chr2 (116-166)||(26354127-26354176)
chr2 (86-166)||(41455199-41455278)
chr2 (112-165)||(45727249-45727305)
chr2 (91-168)||(41446426-41446502)
chr2 (135-166)||(42019685-42019716)
[»] chr1 (46 HSPs)
chr1 (2-166)||(40122001-40122168)
chr1 (1-166)||(28223221-28223390)
chr1 (2-166)||(8550584-8550752)
chr1 (1-166)||(28220026-28220195)
chr1 (2-166)||(50166980-50167147)
chr1 (2-168)||(1833709-1833878)
chr1 (2-166)||(3846921-3847091)
chr1 (2-166)||(10925422-10925590)
chr1 (2-166)||(13137780-13137948)
chr1 (2-166)||(196710-196877)
chr1 (2-166)||(833970-834137)
chr1 (2-149)||(50169032-50169182)
chr1 (3-166)||(49918551-49918718)
chr1 (2-166)||(28265359-28265526)
chr1 (1-166)||(44455359-44455528)
chr1 (2-166)||(45644158-45644326)
chr1 (1-166)||(37559664-37559835)
chr1 (1-138)||(3157064-3157205)
chr1 (2-166)||(4552448-4552616)
chr1 (2-166)||(23555071-23555238)
chr1 (2-167)||(927784-927948)
chr1 (3-166)||(31659439-31659606)
chr1 (3-165)||(30476247-30476413)
chr1 (1-166)||(37503362-37503526)
chr1 (3-162)||(3189532-3189708)
chr1 (3-162)||(3198349-3198525)
chr1 (3-162)||(3207188-3207364)
chr1 (2-164)||(13659153-13659308)
chr1 (2-166)||(41361111-41361278)
chr1 (2-166)||(16455817-16455984)
chr1 (3-151)||(20762874-20763021)
chr1 (3-169)||(13316148-13316318)
chr1 (2-167)||(8870526-8870695)
chr1 (3-149)||(51765601-51765750)
chr1 (2-166)||(46065114-46065278)
chr1 (36-164)||(15820537-15820659)
chr1 (2-152)||(5460103-5460253)
chr1 (120-166)||(19752985-19753032)
chr1 (9-166)||(37282498-37282655)
chr1 (96-143)||(40282680-40282727)
chr1 (210-264)||(7816698-7816752)
chr1 (112-161)||(19754787-19754837)
chr1 (86-124)||(36683897-36683935)
chr1 (88-166)||(1050331-1050408)
chr1 (96-128)||(20622071-20622103)
chr1 (112-148)||(31490293-31490328)
[»] chr7 (48 HSPs)
chr7 (3-166)||(47675936-47676103)
chr7 (2-166)||(27348017-27348185)
chr7 (2-167)||(41317237-41317406)
chr7 (2-166)||(8153538-8153705)
chr7 (1-168)||(19502378-19502549)
chr7 (3-166)||(23555242-23555410)
chr7 (1-166)||(47673744-47673913)
chr7 (1-165)||(48489630-48489798)
chr7 (1-166)||(18126845-18127015)
chr7 (2-166)||(41648814-41648981)
chr7 (1-166)||(14069633-14069802)
chr7 (1-166)||(14379661-14379830)
chr7 (4-166)||(38671025-38671190)
chr7 (2-166)||(36146212-36146380)
chr7 (2-167)||(25616055-25616224)
chr7 (3-168)||(35854118-35854287)
chr7 (1-173)||(31732761-31732938)
chr7 (1-166)||(4586360-4586530)
chr7 (1-162)||(43864443-43864609)
chr7 (2-153)||(495801-495955)
chr7 (2-166)||(23344169-23344332)
chr7 (1-166)||(48491775-48491944)
chr7 (1-166)||(1113852-1114021)
chr7 (2-166)||(24525306-24525474)
chr7 (3-151)||(29991255-29991406)
chr7 (1-166)||(26417515-26417685)
chr7 (9-167)||(31105199-31105357)
chr7 (12-166)||(30024562-30024714)
chr7 (3-147)||(4178975-4179122)
chr7 (3-163)||(23564874-23565033)
chr7 (9-147)||(25766776-25766917)
chr7 (50-163)||(12096969-12097084)
chr7 (29-174)||(48409034-48409183)
chr7 (2-166)||(36574324-36574488)
chr7 (86-168)||(30843284-30843365)
chr7 (112-166)||(6430441-6430496)
chr7 (112-166)||(4510339-4510394)
chr7 (112-166)||(4512181-4512236)
chr7 (29-76)||(31519118-31519165)
chr7 (3-149)||(39731573-39731723)
chr7 (112-164)||(2360774-2360827)
chr7 (3-144)||(43503974-43504117)
chr7 (2-52)||(12097789-12097839)
chr7 (112-166)||(22270266-22270321)
chr7 (112-166)||(30814715-30814770)
chr7 (94-166)||(2580199-2580269)
chr7 (96-149)||(24790302-24790355)
chr7 (112-144)||(6359768-6359800)
[»] chr3 (43 HSPs)
chr3 (1-166)||(22834807-22834975)
chr3 (2-166)||(44700284-44700451)
chr3 (2-166)||(23391712-23391881)
chr3 (3-166)||(7762467-7762635)
chr3 (2-166)||(9666270-9666438)
chr3 (1-166)||(40734696-40734865)
chr3 (1-166)||(40735581-40735750)
chr3 (2-166)||(29196189-29196358)
chr3 (2-166)||(31314641-31314808)
chr3 (3-168)||(37408660-37408829)
chr3 (1-166)||(51399013-51399182)
chr3 (3-151)||(19683703-19683855)
chr3 (1-166)||(39153164-39153333)
chr3 (2-166)||(761045-761211)
chr3 (1-166)||(9581482-9581652)
chr3 (1-166)||(29813260-29813430)
chr3 (3-151)||(9635939-9636090)
chr3 (3-166)||(5236257-5236424)
chr3 (2-166)||(23410131-23410301)
chr3 (1-166)||(29811067-29811237)
chr3 (3-166)||(7764666-7764834)
chr3 (3-166)||(27305519-27305681)
chr3 (1-168)||(29682556-29682728)
chr3 (2-167)||(21350810-21350975)
chr3 (2-167)||(2074882-2075047)
chr3 (3-167)||(9634620-9634787)
chr3 (4-166)||(32891302-32891458)
chr3 (3-151)||(5260138-5260289)
chr3 (3-149)||(45095365-45095514)
chr3 (2-166)||(51351941-51352105)
chr3 (2-153)||(16499225-16499369)
chr3 (3-151)||(5257959-5258110)
chr3 (3-149)||(23199954-23200102)
chr3 (90-166)||(37406981-37407057)
chr3 (27-135)||(32744288-32744390)
chr3 (3-149)||(23197761-23197903)
chr3 (112-166)||(47304575-47304629)
chr3 (96-144)||(801388-801436)
chr3 (121-166)||(4160059-4160105)
chr3 (113-166)||(31340018-31340071)
chr3 (112-144)||(6095414-6095446)
chr3 (112-144)||(43403554-43403586)
chr3 (112-163)||(34491505-34491557)
[»] chr5 (35 HSPs)
chr5 (2-166)||(5887235-5887404)
chr5 (1-152)||(42428244-42428399)
chr5 (3-165)||(13239953-13240118)
chr5 (1-166)||(42426035-42426204)
chr5 (2-170)||(538221-538393)
chr5 (3-166)||(16649635-16649801)
chr5 (11-166)||(31183183-31183341)
chr5 (2-166)||(8565748-8565918)
chr5 (1-166)||(28750455-28750624)
chr5 (3-166)||(30682722-30682890)
chr5 (1-167)||(39468347-39468518)
chr5 (7-166)||(13488406-13488569)
chr5 (1-166)||(19806562-19806729)
chr5 (2-167)||(33831878-33832047)
chr5 (3-166)||(533966-534127)
chr5 (1-164)||(32637023-32637190)
chr5 (1-149)||(37439341-37439494)
chr5 (3-151)||(30182790-30182941)
chr5 (8-166)||(42927099-42927260)
chr5 (3-150)||(25412962-25413112)
chr5 (3-149)||(16409681-16409830)
chr5 (3-166)||(26178088-26178255)
chr5 (3-149)||(13343262-13343411)
chr5 (3-148)||(36073861-36074009)
chr5 (87-166)||(3075549-3075629)
chr5 (3-151)||(26170968-26171119)
chr5 (9-125)||(16452286-16452402)
chr5 (96-166)||(9789021-9789092)
chr5 (96-168)||(18441439-18441512)
chr5 (112-166)||(40147555-40147610)
chr5 (112-168)||(38747298-38747355)
chr5 (5-104)||(9049217-9049317)
chr5 (5-166)||(30897612-30897770)
chr5 (60-163)||(42309827-42309930)
chr5 (112-144)||(28278609-28278641)
[»] chr4 (43 HSPs)
chr4 (3-166)||(12743728-12743892)
chr4 (2-166)||(36463196-36463363)
chr4 (3-164)||(56178438-56178603)
chr4 (1-166)||(26175436-26175605)
chr4 (2-166)||(46147195-46147363)
chr4 (2-163)||(47038219-47038383)
chr4 (3-166)||(29254695-29254861)
chr4 (3-166)||(12739353-12739517)
chr4 (5-166)||(5872021-5872183)
chr4 (3-166)||(34570214-34570381)
chr4 (2-166)||(45686987-45687154)
chr4 (2-166)||(48893443-48893610)
chr4 (3-166)||(48143245-48143417)
chr4 (3-166)||(52082463-52082630)
chr4 (3-151)||(5369897-5370049)
chr4 (1-168)||(37740824-37740996)
chr4 (2-164)||(52467159-52467326)
chr4 (1-168)||(54199706-54199877)
chr4 (3-166)||(52095162-52095329)
chr4 (1-166)||(9927258-9927428)
chr4 (2-166)||(4588155-4588320)
chr4 (2-168)||(6541985-6542151)
chr4 (1-166)||(31474346-31474512)
chr4 (80-151)||(29999644-29999715)
chr4 (2-164)||(37229531-37229693)
chr4 (2-78)||(36994719-36994795)
chr4 (3-166)||(5207651-5207811)
chr4 (29-145)||(13992112-13992232)
chr4 (1-107)||(5429878-5429988)
chr4 (112-166)||(50262487-50262542)
chr4 (1-101)||(3913776-3913876)
chr4 (28-166)||(24969890-24970030)
chr4 (112-166)||(41639746-41639801)
chr4 (2-147)||(48142206-48142348)
chr4 (120-166)||(36994851-36994898)
chr4 (3-140)||(31495130-31495271)
chr4 (112-144)||(2210040-2210072)
chr4 (2-58)||(29056555-29056610)
chr4 (53-120)||(51338325-51338392)
chr4 (7-61)||(29999719-29999772)
chr4 (88-125)||(5280635-5280672)
chr4 (109-168)||(34496053-34496110)
chr4 (88-162)||(37754777-37754850)
[»] chr6 (28 HSPs)
chr6 (3-166)||(5408869-5409036)
chr6 (3-166)||(5413194-5413361)
chr6 (1-166)||(28137211-28137379)
chr6 (1-140)||(9182857-9183000)
chr6 (2-164)||(3038729-3038895)
chr6 (9-166)||(26954091-26954251)
chr6 (3-148)||(33160169-33160317)
chr6 (2-166)||(16569220-16569389)
chr6 (9-166)||(16452127-16452288)
chr6 (3-144)||(5406025-5406166)
chr6 (3-144)||(5410350-5410491)
chr6 (2-166)||(14521478-14521649)
chr6 (3-168)||(31404472-31404641)
chr6 (3-167)||(30834332-30834502)
chr6 (3-151)||(2171342-2171496)
chr6 (2-75)||(33211084-33211157)
chr6 (109-166)||(22963508-22963566)
chr6 (109-166)||(23824827-23824885)
chr6 (112-166)||(602903-602958)
chr6 (85-144)||(3072579-3072638)
chr6 (96-143)||(412387-412434)
chr6 (102-166)||(257245-257308)
chr6 (112-144)||(17758346-17758378)
chr6 (113-144)||(5043951-5043982)
chr6 (2-107)||(4045614-4045717)
chr6 (112-144)||(3808518-3808550)
chr6 (112-144)||(17763313-17763345)
chr6 (112-144)||(21589252-21589284)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-166)||(20216-20384)
[»] scaffold0016 (1 HSPs)
scaffold0016 (3-149)||(114804-114955)
[»] scaffold1668 (1 HSPs)
scaffold1668 (2-166)||(1301-1470)
[»] scaffold0006 (1 HSPs)
scaffold0006 (2-164)||(148914-149069)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-151)||(434736-434887)
[»] scaffold0491 (2 HSPs)
scaffold0491 (3-149)||(10976-11125)
scaffold0491 (3-149)||(8550-8699)
[»] scaffold0286 (1 HSPs)
scaffold0286 (85-151)||(11853-11919)
[»] scaffold1519 (1 HSPs)
scaffold1519 (10-151)||(1125-1269)
[»] scaffold0466 (1 HSPs)
scaffold0466 (112-144)||(7646-7678)
[»] scaffold0176 (1 HSPs)
scaffold0176 (112-144)||(17817-17849)


Alignment Details
Target: chr8 (Bit Score: 134; Significance: 8e-70; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 6599168 - 6599333
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtt 100  Q
    |||||||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6599168 cctttatctttttcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgtttgtgttcactttgatattggtt 6599267  T
Q  101 actacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6599268 actactttcctttgctctacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 6599333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 6674621 - 6674786
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtt 100  Q
    |||||||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6674621 cctttatctttttcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgtttgtgttcactttgatattggtt 6674720  T
Q  101 actacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6674721 actactttcctttgctctacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 6674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 30143539 - 30143708
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    ||||||||||||||||||||||||  | |||||||||||||| ||| |||||||||||||||||||||| |||    ||| ||||| |||||||||||||    
T  30143539 cctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatatt 30143638  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30143639 ggttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 30143708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 41366584 - 41366420
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggt 99  Q
    ||||||||||| |||||||||| || |||||||||||||| ||| |||||||||||||||||||||| ||||| ||   |||| | ||||||||||||||    
T  41366584 tttatcttttgtttgtggttttgtgcttttcactttgattcctatattagatctaggtgttgttattgttgttattgcttgtgtttactttgatattggt 41366485  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaa 164  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41366484 tactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaa 41366420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 4731857 - 4732026
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||||||||| ||||||||||||     
T  4731857 cctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatatc 4731956  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  4731957 ggttactactttcctttgctccacacatcattgtttgtattggtgtgattttgagttcgaattcacaaca 4732026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 5689467 - 5689635
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgt-gctcactttgatattg 97  Q
    ||||||||||| |||||||||||  | |||||||||||||||||||||||||| ||| |||||||||||||||||||   ||| | |  |||||||||||    
T  5689467 ctttatcttttacttgtggttttgagcttttcactttgattactaaattagatttagatgttgttattattgttgttgcttgttgtttgctttgatattg 5689566  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5689567 gttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtcggaattcacaaca 5689635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 15212985 - 15213155
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||| ||| || |||||||||||||| ||| |||||||| ||||| ||||||| |||    ||||||||| |||||||||||||    
T  15212985 cctttatcttttgcttgtggctttgtgcttttcactttgattcctagattagatcaaggtgctgttattgttgattattgtttgtgttcactttgatatt 15213084  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  15213085 ggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 15213155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 40321276 - 40321442
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| | ||||||||||||     
T  40321276 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgatattga 40321375  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    || |||||| ||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  40321376 ttgctactttcctttgctccacatatcatagtttgtatt-gtgtgattttgagtcggaattcacaaca 40321442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 12702603 - 12702431
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgatta-ctaaattagatctaggtgt---tgttattattgttgtt---tgtgctcactttgat 93  Q
    |||||||||| ||||||||||||| |||||||||||||||||  ||| |||||||||||||||   ||||||||||||||||   |||| | ||||||||    
T  12702603 cctttatcttgtgcttgtggttttgtgtttttcactttgattttctagattagatctaggtgtcgttgttattattgttgttgcttgtgtttactttgat 12702504  T
Q  94 attggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  12702503 attggttactactttcctttgctccacacatcatagtttgtattgatgtgattttgagtccgaattcacaaca 12702431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 18106043 - 18105876
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||| |||||||||||||| ||||||| ||||| ||   |||| | ||||| |||||||    
T  18106043 ctttatcttttgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgatgttattgttgttattgcttgtgtttactttaatattgg 18105944  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  18105943 ttactactttcctttgctctacacatcatagtttgtattagtgtgattttgagtctgaattcataaca 18105876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 42498396 - 42498546
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||    ||| ||| ||||| |||||||||||||||    
T  42498396 tttatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgttgttattgttaattattgcttgtgttcactttgatattgg 42498495  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    || |||||| |||||||||||||||||||| ||||||||||||||||||||    
T  42498496 ttgctactttcctttgctccacacatcatattttgtattggtgtgattttg 42498546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 1345343 - 1345176
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||| ||||  | |||||||||||||||||| |||||||||||||||| ||||||||||||||   |||| | |||||||||||||    
T  1345343 ctttatcttttgcttgtgattttgagattttcactttgattactagattagatctaggtgttattattattgttgttgtttgtgtttactttgatattgg 1345244  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||||||| || || ||||||||| |||||||||||| || ||||||||||||    
T  1345243 ttactactttcctttgctccacagattattgtttgtatttgtgtgattttgaatccgaattcacaaca 1345176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 14750281 - 14750384
Alignment:
Q  167 gtgttcataggtggttgggaatctcaacggttcagccctcatgatattggagagcatggtttgtgattcggtggtttccatgagttcaggaaggatatat 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  14750281 gtgttcatagctggttgggaatctcaacggttcagccctcatgatattggagagcatggtttgtgattcggcagtttccatgagttcaggaaggatatat 14750380  T
Q  267 agtt 270  Q
    ||||    
T  14750381 agtt 14750384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 44304057 - 44304208
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||  || |||||||||||||| ||| |||||||||||||||||||||| |||    ||| ||||||||||||| |||||||    
T  44304057 tttatcttttgcttgtggtttg-tgcttttcactttgatttctagattagatctaggtgttgttattgttgattattgcttgtgctcactttaatattgg 44304155  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  44304156 ttactactttcctttgctccacacatcatagtatgtattggtgtgattttgag 44304208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 33352351 - 33352518
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||| ||||||| |||||||||||||| |||    ||| ||||| |||||||||||||||    
T  33352351 tttatcttttgcttgtggatttgtgtttttcactttgatttctagattagatttaggtgttgttattgttgattattgcttgtgttcactttgatattgg 33352450  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||| ||||| ||||||||||||| |||||| ||| |||||||||||||||||||  ||||||||||||    
T  33352451 ttattactttcctttgctccacatatcataatttatattggtgtgattttgagtacgaattcacaaca 33352518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 27811478 - 27811631
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatattg 97  Q
    |||||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||    ||| ||| ||||| ||||||||||||||    
T  27811478 ctttatcttttgcttgtgattttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattg 27811577  T
Q  98 gttactacttccctttgctccacacatc--atagtttgtattggtgtgattttg 149  Q
    |||||||||| ||||| |||||||||||  ||||||||||||||||||||||||    
T  27811578 gttactactttcctttcctccacacatcatatagtttgtattggtgtgattttg 27811631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 34254297 - 34254149
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||  || ||||| |||||||| ||| |||||||||||||| ||||||| |||    ||| |||||||||||||||||||||    
T  34254297 tttatcttttgcttgtggtttg-tgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttgatattgg 34254199  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgatttt 148  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  34254198 ttactactttcctttgctccacacatcatagtttgtattggtgtgttttt 34254149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 43036622 - 43036800
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtg---ttgttattattgttgtttgtgctcactttgatattg 97  Q
    ||||||||||||||||||||||||  | ||||||||||| |||||| ||||||||||||||   |||||||| |||||| ||||| | ||||||| ||||    
T  43036622 cctttatcttttgcttgtggttttgagcttttcactttggttactagattagatctaggtggtgttgttattgttgttgcttgtgtttactttgaaattg 43036721  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacagtgttcata 175  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||| |||||||||  |||||| |||| | ||||||    
T  43036722 gttactactttcctttgctccacacatcattttttgtattggtgtgagttttgagtccaaattcataacaattttcata 43036800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 34256473 - 34256325
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||  || ||||| |||||||| ||| |||||||||||||| ||||||| |||    ||| ||||||||||||| |||||||    
T  34256473 tttatcttttgcttgtggtttg-tgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttaatattgg 34256375  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgatttt 148  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  34256374 ttactactttcctttgctccacacatcatagtttgtattggtgtgttttt 34256325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 4733905 - 4734077
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||| ||||||||||| || |||||| |||| || ||| ||| |||||||||||||||||| |||    ||| ||||| ||| |||||||||    
T  4733905 cctttatcttttccttgtggttttgtgcttttcattttgtttcctacatttgatctaggtgttgttattgttgattattgcttgtgttcattttgatatt 4734004  T
Q  97 ggttactacttccctttgctccacacatca-tagtttgtattggtgtgattttgagtctgaattcacaacagt 168  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||| ||||||| || ||||||||||||||    
T  4734005 ggttactactttcctttgctccacacatcattggtttgtattggtgtaattttgaatccgaattcacaacagt 4734077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 4743186 - 4743027
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    |||||||||| |||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||      | ||||| | |||||| |||||||||    
T  4743186 ctttatctttcgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttatt------gcttgtgtttactttggtattggtta 4743093  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    | |||| |||||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||    
T  4743092 ccactttcctttgctccacacattatagtttgtattggtgtgagatttgagtccgaattcacaaca 4743027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 17982855 - 17983002
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| |||||||||||||||  || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| ||||| |||||||| ||||||    
T  17982855 tttatattttgcttgtggtttg-tgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgttattgg 17982953  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattt 147  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  17982954 ttactacgttcctttgctccacacatcatagtttgtattggtgtgattt 17983002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 10015277 - 10015444
Alignment:
Q  4 ttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg---ttgtttgtgctcactttgatattggtt 100  Q
    |||||||||||||||||||||    |||||||||||||||||||||||||||||||| ||||||||||||   ||| ||||| |||||||||||||||||    
T  10015277 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgttcactttgatattggtt 10015376  T
Q  101 actacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacag 167  Q
    | ||||| ||| ||||||||||||| | ||||  |||||||| | |||| | || |||||||||||||    
T  10015377 attactttcctctgctccacacatctttgttttcattggtgtaagttttaaatccgaattcacaacag 10015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 19491670 - 19491503
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    |||||||||||| ||||||||||  | |||| ||||||||| ||| ||||||| |||||||||||||| |||||||   ||||| | ||||||||||||     
T  19491670 ctttatcttttgtttgtggttttgagctttttactttgattcctagattagatataggtgttgttattgttgttgttacttgtgtttactttgatattga 19491571  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||| ||||| |||||||||||||||||||||||| |||||||  || ||||||||| ||||||||||||    
T  19491570 ttaatactttcctttgctccacacatcatagttt-tattggttagagttttgagtccgaattcacaaca 19491503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 3303642 - 3303474
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgatta----ctaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgata 94  Q
    |||||||||||||||||| |||| |  ||||||||||||||     ||| ||||||||||||||| |||||||||||||||   |||| |   |||||||    
T  3303642 ctttatcttttgcttgtgattttgtacttttcactttgattgattcctagattagatctaggtgtagttattattgttgttgcttgtgtttgttttgata 3303543  T
Q  95 ttggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcac 162  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  3303542 ttggttaccactttcctttgctccacacatcatagtttgtattggtgtgagatttgagtccgaattcac 3303474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 1746185 - 1746034
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| |||||||||||||||   | |||| ||||||||| ||| |||||||||||||| ||||||| |||    ||| ||||| |||||||| ||||||    
T  1746185 tttatattttgcttgtggtttgc-gcttttgactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgttattgg 1746087  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  1746086 ttactactttcctttactccacacatcatagttcgtattggtgtgattttgag 1746034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 19945325 - 19945174
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| |||||||||||||||  || ||||||||| |||| ||| |||||||||||||| ||||||| |||    ||| |||   |||||||| ||||||    
T  19945325 tttatattttgcttgtggtttg-tgcttttcacttcgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattgg 19945227  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  19945226 ttactactttcctttgctccacacatcaaagtttgtattggtgtgattttgag 19945174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 8153984 - 8154147
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggt 99  Q
    |||||||||||| |||  |||| ||||||||||||| ||| ||| |||| |||||||| |||||||||||||||||   |||| | |||||||||||| |    
T  8153984 tttatcttttgcatgtaattttgtgtttttcacttt-attcctagattacatctaggt-ttgttattattgttgttgcttgtggttactttgatattgat 8154081  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||| ||||| || ||||||||||||||| |||| ||||||||||||| | ||||||||||||    
T  8154082 tactactttcctttacttcacacatcatagttt-tattagtgtgattttgagcccgaattcacaaca 8154147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 32902152 - 32901989
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctagg--tgttgttattattgttgtttgtgctcactttgatattggtt 100  Q
    |||||||||||||| ||||||| |||||||||| ||| || ||| ||||||||||||  ||||||| || |||||||||| | |  |||||||||| |||    
T  32902152 tttatcttttgcttttggttttgtgtttttcac-ttggttcctagattagatctaggtttgttgttgttgttgttgtttgaggttgctttgatattagtt 32902054  T
Q  101 actacttc-cctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||| | |||||||||||||||  ||||  ||||||| |||||||||||| ||||||||||||    
T  32902053 actacttctcttttgctccacacatctaagtt--tattggtctgattttgagtccgaattcacaaca 32901989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 4162684 - 4162832
Alignment:
Q  21 ttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatatt----ggttactacttccctttgct 116  Q
    |||| ||||||||||||||||| ||| ||||||||||||| || ||||| |||||||||||| | |||||||||||    |||||| | ||  |||||||    
T  4162684 ttttgtgtttttcactttgattcctagattagatctaggttttattattgttgttgtttgtgattactttgatattaattggttaccatttttctttgct 4162783  T
Q  117 ccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    || |||||||| |||| || |||| |||||||||||| ||||||||||||    
T  4162784 cctcacatcattgttt-tactggtatgattttgagtccgaattcacaaca 4162832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 31218459 - 31218606
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| ||||| || |||| || ||||||||||| || ||| |||||||||||||| ||||||| |||    ||| |||   |||||||| ||||||    
T  31218459 tttatcttgtgcttatg-ttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattgg 31218557  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattt 147  Q
    || |||||| |||||||||||||||||||||||| ||||||||||||||    
T  31218558 ttgctactttcctttgctccacacatcatagtttatattggtgtgattt 31218606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 167
Target Start/End: Original strand, 2627941 - 2628109
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg-----ttgtttgtgctcactttgatattg 97  Q
    |||||||| |||||||| ||||||| ||||||||| | || ||| |||||||||||||||||||||| |||     ||| |||  | ||||||| || ||    
T  2627941 tttatcttgtgcttgtg-ttttatgcttttcactt-gtttcctagattagatctaggtgttgttattgttgattttttgcttgcacccactttgttagtg 2628038  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag-tctgaattcacaacag 167  Q
    |||||||||| ||||||||||||||||| || |||||||||||||| ||| ||| || |||||||||||||    
T  2628039 gttactactttcctttgctccacacatcttactttgtattggtgtggtttcgagatcggaattcacaacag 2628109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 8965629 - 8965490
Alignment:
Q  28 tttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggttactacttccctttgctccacacat 124  Q
    |||||||||| |||| ||| |||| |||||||| |||||||| ||||||||   |||| | |||||||||||||||||||| | |||| ||||||| |||    
T  8965629 tttttcactt-gattcctagattaaatctaggt-ttgttattgttgttgttgcttgtggttactttgatattggttactacgttcctt-gctccacgcat 8965533  T
Q  125 catagtttgtattggtgtgattttgagtctgaattcacaacagt 168  Q
    |||||||| |||||||||||||||||||  ||||||||||||||    
T  8965532 catagttt-tattggtgtgattttgagttcgaattcacaacagt 8965490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 18142014 - 18142090
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt 78  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  18142014 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatgtaggtgttgttattattattgtt 18142090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 1292434 - 1292311
Alignment:
Q  4 ttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgt---tgtttgtgctcactttgatattggtt 100  Q
    |||||||||||| ||||||||  | |||||||||||||| ||| |||||||||||||||||||||| ||||   |  ||||| | |||||||||||| ||    
T  1292434 ttatcttttgctcgtggttttgagcttttcactttgattcctagattagatctaggtgttgttattgttgttactacttgtgtttactttgatattgttt 1292335  T
Q  101 actacttccctttgctccacacat 124  Q
    |||||||  ||||||||| |||||    
T  1292334 actacttttctttgctccccacat 1292311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 29796209 - 29796130
Alignment:
Q  86 actttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacag 167  Q
    ||||||||| |||||| ||||||| |||||||||||||||| | |||  ||||||||||| |||||||||||||||||||||    
T  29796209 actttgatactggttattacttccttttgctccacacatcaaaattt--attggtgtgatgttgagtctgaattcacaacag 29796130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 3051090 - 3051019
Alignment:
Q  7 tcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt 78  Q
    |||| |||||||||||||  | |||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  3051090 tcttatgcttgtggttttgagcttttcactttaatttctagattagatctaggtgttgttattattgttgtt 3051019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 11711968 - 11711803
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgt-tgttattattgttgtttgtgctcactttgatattggtt 100  Q
    ||||||| |||| ||||||||||||| ||| |||| | ||| ||| ||||||||||||| | | || || |||||  ||| | | ||||| || ||||||    
T  11711968 ctttatcctttgtttgtggttttatgctttacactct-attcctatattagatctaggtttgtattgttgttgtttcttgaggttacttttatcttggtt 11711870  T
Q  101 actacttcccttt-gctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacagt 168  Q
    ||||||| ||||| ||||||||||||  |||||  |||||||| |||||||||| ||||||||||||||    
T  11711869 actactttccttttgctccacacatctaagttt--attggtgtaattttgagtccgaattcacaacagt 11711803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 3073846 - 3073686
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggt--gttgttattattgttgtt---tgtgctcactttgatatt 96  Q
    ||||||||||||||||||||||| |  | |||||||| ||| ||| |||| ||||||||  |||||| || ||| || |   |||| | ||||||||| |    
T  3073846 ctttatcttttgcttgtggttttgtactcttcacttt-attcctagattaaatctaggtttgttgttgttgttgctgctcattgtggttactttgatact 3073748  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattc 160  Q
    ||||| ||||| ||||||||||||| || ||||||  |||||||||| ||||||||| ||||||    
T  3073747 ggttattactttcctttgctccacatatgatagtt--tattggtgtgtttttgagtccgaattc 3073686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 7493284 - 7493352
Alignment:
Q  94 attggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||  ||| ||||||||||||    
T  7493284 attgattactacttcc-tttgctccacacatcatagttt-tattggtgtgatttt--gtccgaattcacaaca 7493352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 30291804 - 30291865
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgtt 63  Q
    |||||||||||||||||||||||    ||| |||||||||||||| ||||||| ||| ||||    
T  30291804 ctttatcttttgcttgtggttttgaactttccactttgattactagattagatttagatgtt 30291865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 5e-65; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 723714 - 723547
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  723714 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgattgtgttcactttgatattgg 723615  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  723614 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 723547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 34139740 - 34139573
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||| |||||||||||||||||   |||| |||||||||||||||    
T  34139740 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtcttgttattattgttgttgcttgtgttcactttgatattgg 34139641  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34139640 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 34139573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 42362546 - 42362713
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||   || | |||||||||| ||||    
T  42362546 ctttatcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgagttcactttgattttgg 42362645  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42362646 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 42362713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 24885785 - 24885953
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgttt---gtgctcactttgatattg 97  Q
    |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||||||||   ||| ||||||||||||||    
T  24885785 cctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttatcattgttgtttcttgtgttcactttgatattg 24885884  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24885885 gttactattttcctttgctacacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 24885953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 14633795 - 14633628
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||| ||||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  14633795 ctttatcttttgattgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattgg 14633696  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14633695 ttactactttcctttgcttcacacatcatagtttgtattggtgtgattttgagtctgaaatcacaaca 14633628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 2334386 - 2334216
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattg 97  Q
    |||||||||| |||||||||||||    |||||||||||||||| | |||||||||||||||||||||||||||||||   |||| | ||||||| ||||    
T  2334386 cctttatcttgtgcttgtggttttgaagttttcactttgattaccagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattg 2334287  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacagt 168  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2334286 gttactactttcctttgcttcacacatcatagtttgtattggtgtgattttgagtctgaattcacaacagt 2334216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 11067501 - 11067667
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| |||||||||||||||    
T  11067501 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattgg 11067600  T
Q  99 ttactacttccctttgctccacacatcatagtttgta-ttggtgtgattttgagtctgaattcacaa 164  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||| |||||||| ||||||||||||    
T  11067601 ttactactttcctttgctccacacatcatagtttgaatttggtgtaattttgaggctgaattcacaa 11067667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 33162421 - 33162254
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgt-gctcactttgatattgg 98  Q
    ||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||   ||| | |  ||||||||||||    
T  33162421 tttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgttgtttgctttgatattgg 33162322  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  33162321 ttactactttcctttgctccacacatcatagtttgtattgatgtgattttgagtccgaattcacaaca 33162254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 36988042 - 36987875
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||| ||| || |||||||||||||| ||| |||||||||||||||||||||| |||    ||| ||||| | ||||||| |||||    
T  36988042 tttatcttttgcttgtggctttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgtttactttgaaattgg 36987943  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36987942 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 36987875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 14202391 - 14202224
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||   ||| | ||||||||||||||     
T  14202391 ctttatcttttgcttgtggttttaagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgcgttcactttgatattga 14202292  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||| ||||||| |||||||||||| ||||| ||||||||| || ||||||||||||    
T  14202291 ttactactttcctttactccacatatcatagtttgtgttggtatgattttgactccgaattcacaaca 14202224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 17057338 - 17057169
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||||||| ||| ||| |||||||||||||| ||||||| |||    ||| ||||| |||||||||||||    
T  17057338 cctttatcttttgcttgtggttttgtgcttttcactttaattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatatt 17057239  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  17057238 ggttactactttcctttgctctacacatcatattttgtattggtgtgattttgagtccgaattcacaaca 17057169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 17085321 - 17085152
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||||||| ||| ||| |||||||||||||| ||||||| |||    ||| ||||| |||||||||||||    
T  17085321 cctttatcttttgcttgtggttttgtgcttttcactttaattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatatt 17085222  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  17085221 ggttactactttcctttgctctacacatcatattttgtattggtgtgattttgagtccgaattcacaaca 17085152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 38312439 - 38312600
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||| |||||||    ||||||| ||||| |||||||||||||    
T  38312439 cctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattgttgcttgtgttcactttgatatt 38312538  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaat 158  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  38312539 ggttactactttcctttgctccacacatcattgtttatattggtgtgattttgagtccgaat 38312600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 6594971 - 6594804
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||  ||||| |||||||||||||||    
T  6594971 tttatcttttgcttgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattacttgtgttcactttgatattgg 6594872  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  6594871 ttactactttactttgctccacacatcatagtttgtattggtgtgattttgagtccaaattcacaaca 6594804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 11151563 - 11151393
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    |||||||||||| ||||||||||  | |||||||||||||||||| ||||||||||| ||||||||||||||||||   ||||| ||||||||||||||     
T  11151563 ctttatcttttgtttgtggttttgagcttttcactttgattactagattagatctagctgttgttattattgttgttgcttgtgttcactttgatattga 11151464  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacagt 168  Q
    |||||||||   |||||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||||    
T  11151463 ttactacttttatttgctccacacatcatagtttgtattggtatgagttttgagttcgaattcacaacagt 11151393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 39285035 - 39285202
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| | ||||||| |||||    
T  39285035 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattgg 39285134  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||  |||||||||||||||||||| |||||||||| ||| |||| |||| ||||||||||||    
T  39285135 ttactacttttctttgctccacacatcatag-ttgtattggtatgagttttaagtccgaattcacaaca 39285202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 29868070 - 29868237
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattggt 99  Q
    |||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| | ||||| | |||| |    
T  29868070 tttatcttgtgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttaaaattgat 29868169  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattcacaaca 166  Q
    ||||||||  ||||||||||||||||||||||||||||| |||| | |||||||| ||||||||||||    
T  29868170 tactacttttctttgctccacacatcatagtttgtattgctgtgaaatttgagtccgaattcacaaca 29868237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 5723222 - 5723074
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||  || |||||  ||||||| ||| |||||||||||||||||||||| |||    |||||||||||||||||||||||||    
T  5723222 tttatcttttgcttgtggtttg-tgcttttctttttgattcctagattagatctaggtgttgttattgttgattattgtttgtgctcactttgatattgg 5723124  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgatttt 148  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||    
T  5723123 ttactactttactttgctccacacatcatagtttgtattggtgtgatttt 5723074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 36773758 - 36773926
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctca----ctttgatattg 97  Q
    |||||||||||||||||||||||  | |||||  ||| ||||||| |||||||||||||||||||||||||||||||  | ||      |||||||||||    
T  36773758 ctttatcttttgcttgtggttttgagcttttcttttttattactagattagatctaggtgttgttattattgttgttgcttcttgttggctttgatattg 36773857  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  36773858 gttactactttcatttgctccacacatcatagtttgtattggtgtgattttgaatccgaattcacaaca 36773926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 36317981 - 36317813
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattat---tgttgtttgtgctcactttgatattgg 98  Q
    ||||||||||||||||||||||| || |||||||||||||||||| |||| |||||||||||||||||||   ||||| ||||| | ||||||| |||||    
T  36317981 ctttatcttttgcttgtggttttgtgcttttcactttgattactagattaaatctaggtgttgttattattgctgttgcttgtgtttactttgaaattgg 36317882  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||| | |||| || ||||||||| |||||||||||||||| |||||||||  |||||||||||    
T  36317881 ttactactttcatttgttctacacatcattgtttgtattggtgtgagttttgagtccaaattcacaaca 36317813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 11690697 - 11690856
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtt 100  Q
    ||||||||||||||||||||||||  | |||||||||| ||| ||| ||||||||||||||||||||||      | ||||| |||||| |||||| |||    
T  11690697 cctttatcttttgcttgtggttttgagcttttcactttaattcctagattagatctaggtgttgttatt------gcttgtgttcactt-gatattagtt 11690789  T
Q  101 actacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  11690790 actactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 11690856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 36205631 - 36205480
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| |||||||||||||||  || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| ||||| |||||||| ||||||    
T  36205631 tttatattttgcttgtggtttc-tgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgttattgg 36205533  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  36205532 ttactactttcctttgctccacacatcatagtttgtattagtgtgattttgag 36205480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 11049750 - 11049912
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    |||||| |||||||||||||||| |  |||||||||||||| ||| ||||||||||||| || ||||| |||||| || || | ||||||||||||||||    
T  11049750 ctttatattttgcttgtggttttgtacttttcactttgattcctagattagatctaggt-ttattattgttgttgcttatgattactttgatattggtta 11049848  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||| | |||||||||| ||||||||||| |||||||||||||||| ||| ||| ||||||||    
T  11049849 ctactttcttttgctccacgcatcatagttt-tattggtgtgattttgcgtccgaactcacaaca 11049912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 4484294 - 4484147
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| ||||||||||||| || ||||||||||| || ||| |||||||||||||||||||||| |||    ||| |||  ||||||||| ||||||    
T  4484294 tttatcttgtgcttgtggtttt-tgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcactcactttgttattgg 4484196  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattt 147  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||||    
T  4484195 ttactactttcctttgctccacacatcatatttcgtattggtgtgattt 4484147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 45099956 - 45100103
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| ||||||||||| |||  || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| ||||| |||||||||||||||    
T  45099956 tttatattttgcttgtgatttg-tgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgg 45100054  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattt 147  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||||    
T  45100055 ttactactttcctttgctccacacatcataattcgtattggtgtgattt 45100103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 2838146 - 2838313
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgtta---ttattgttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||| ||| |||| |||||||||||||||   || |||||||||||| | ||||||||| |||    
T  2838146 ctttatcttttgcttgtggttttgagcttttcactttgattcctagattatatctaggtgttgttattgttgttgttgtttgtgtttactttgatagtgg 2838245  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||| ||||| |||||||||||| ||| | ||||||||||| ||||| ||| ||| ||||||||    
T  2838246 ttactactttcctttactccacacatcaaagtat-tattggtgtgagttttgtgtccgaactcacaaca 2838313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 32289770 - 32289939
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| |||||||| ||||||| ||||||||||| || ||| |||||||||||||||||||||| |||    ||| |||  | ||||||| || |||    
T  32289770 tttatcttgtgcttgtg-ttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccactttgttagtgg 32289868  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag-tctgaattcacaacagt 168  Q
    ||||||||| ||||||||||||||||| || |||||||||||||| ||||||| || ||||||||||||||    
T  32289869 ttactactttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaattcacaacagt 32289939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 4503099 - 4502952
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| |||||||| |||| || ||||||||||| || ||| |||||||||||||| ||||||| |||    ||| |||   |||||||| ||||||    
T  4503099 tttatcttgtgcttgtg-ttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattgg 4503001  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattt 147  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  4503000 ttactactttcctttactccacacattatagtttgtattggtgtgattt 4502952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 13121962 - 13122124
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgt---tgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||||||||||||| |||||| ||| |||| |||||||| |||||||| ||||   || |||   | | ||||||||||     
T  13121962 ctttatcttttgcttgtggttttatgtttttcac-ttgatttctagattacatctaggt-ttgttattgttgttactgcttgatgttattttgatattga 13122059  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaa 164  Q
    ||| |||||  |||| |||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  13122060 ttagtacttttctttactccacacatcatagttt-tattggtgtgattttgtgtccgaattcacaa 13122124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 26353381 - 26353495
Alignment:
Q  4 ttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggttact 103  Q
    ||||||||||||||||||||| |||||||||||||||||     |||||||||| || |||||||| |||||  ||||| | ||||| ||||||||||||    
T  26353381 ttatcttttgcttgtggttttgtgtttttcactttgatt-----attagatctaagttttgttattgttgttccttgtgattactttaatattggttact 26353475  T
Q  104 acttccctttgctccacaca 123  Q
    |||| ||||||||| |||||    
T  26353476 actttcctttgctctacaca 26353495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 12123557 - 12123434
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggt--gttgttattattgttgtttgtgctcactttgatattggt 99  Q
    |||||||||||||||||| |||| | |||||||||| |||| ||| ||||||| |||||  ||| || || |||||||||| | | ||||||||||||||    
T  12123557 ctttatcttttgcttgtgattttgtatttttcactt-gatttctagattagatataggtttgttattgttgttgttgtttgaggttactttgatattggt 12123459  T
Q  100 tactacttccctttgctccacacat 124  Q
    |||||||| ||||||||||||||||    
T  12123458 tactactttcctttgctccacacat 12123434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 17490120 - 17489954
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtt--tttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggt 99  Q
    ||||||| |||||||||||||||  |||  ||||||||  ||  |||||||| ||||||||    |||||||||||||||||| | ||||||||||||||    
T  17490120 ctttatcatttgcttgtggttttgagttgttttcactta-atccctaaattaaatctaggt----ttattattgttgtttgtggttactttgatattggt 17490026  T
Q  100 tactacttccctttgctcca--cacatcatagtttgtattggtgtgattttgagtctgaattcacaacagtgt 170  Q
    ||||| || |  ||||||||  ||||||||||||| ||||||||  |||||||||| ||||||||||||||||    
T  17490025 tactattttctcttgctccacacacatcatagttt-tattggtgcaattttgagtccgaattcacaacagtgt 17489954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 30833550 - 30833697
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| ||||||||||||  || ||||||||||| || ||| |||||||||||||||||||||| |||    ||| |||  ||||| |   || |||    
T  30833550 tttatcttgtgcttgtggtttg-tgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcactcacataattaatgg 30833648  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattt 147  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||||    
T  30833649 ttactactttcctttgctccacacatcatatttcgtattggtgtgattt 30833697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 1345663 - 1345730
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt 69  Q
    ||||||||| || ||||||||||  | |||||||||||||| ||| ||||||||||||||||||||||    
T  1345663 ctttatcttatgattgtggttttgagcttttcactttgattcctagattagatctaggtgttgttatt 1345730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 26354127 - 26354176
Alignment:
Q  116 tccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  26354127 tccacacatcatagttt-tattggtgtgattttgagtccgaattcataaca 26354176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 41455199 - 41455278
Alignment:
Q  86 actttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||| ||||||||||||| |||||||||||  ||  ||||  ||||| ||||| ||||||||||||||||||||||    
T  41455199 actttgatatcggttactacttccttttgctccacatgtctaagtt--tattgttgtgagttttgagtctgaattcacaaca 41455278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 45727249 - 45727305
Alignment:
Q  112 ttgctccacacatcata--gtttgtattggtgtgat-tttgagtctgaattcacaac 165  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||    
T  45727249 ttgctccacacatcatatagtttgtattggtgtgaaatttgagtctgaattcacaac 45727305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 41446426 - 41446502
Alignment:
Q  91 gatattggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacagt 168  Q
    |||| |||||||||||| | ||||||||||||||   |||||  |||| ||||| ||||||||||||||||||||||||    
T  41446426 gatactggttactactttcttttgctccacacatttaagttt--attgttgtgagttttgagtctgaattcacaacagt 41446502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 166
Target Start/End: Complemental strand, 42019716 - 42019685
Alignment:
Q  135 attggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||||||||||||||||||||||||    
T  42019716 attggtgtgattttgagtctgaattcacaaca 42019685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 40122168 - 40122001
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||| ||||||||    
T  40122168 ctttatcttttgcttgtggttttgagcttttcactttgattactaaattagatctaggtgttgttattattgttgttgcttgtgttcacttagatattgg 40122069  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  40122068 ttactactttcctttgctccacgcatcatagtttgtattggtgtgattttgagtccgaattcacaaca 40122001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 28223390 - 28223221
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattg 97  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| ||||||||||||||    
T  28223390 cctttatcttttgcttgtgattttgtgtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattg 28223291  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||| | |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  28223290 gttactactttcgtttgctccacacatcatagtttgtattggtctgagttttgagtccgaattcacaaca 28223221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 8550752 - 8550584
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattg 97  Q
    ||||||||| |||||||| |||| ||||||||||||||||| ||| |||||||||||||||||||||| |||    ||| ||||| ||||||||||||||    
T  8550752 ctttatcttgtgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattg 8550653  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8550652 gttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 8550584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 28220195 - 28220026
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgt---tgtttgtgctcactttgatattg 97  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||   |||||||| ||||||| ||||||    
T  28220195 cctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgtttgtgttcactttaatattg 28220096  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||| ||  ||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  28220095 gttactaattttctttgttccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 28220026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 50167147 - 50166980
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgttt---gtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||    |||||||||||||||||| ||||||||||||||||||||||||||||||||   ||| | |||||||||||||    
T  50167147 ctttatcttttgcttgtggttttgaacttttcactttgattactagattagatctaggtgttgttattattgttgtttcttgtgtttactttgatattgg 50167048  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||  || |||||||||    
T  50167047 ttactactttcctttgctccacacatcatagtttgttttggtgtgattttgagttcgagttcacaaca 50166980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 1833709 - 1833878
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    ||||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| | ||||||| |||||    
T  1833709 ctttatcttttgcttgtagttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattgg 1833808  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacagt 168  Q
    |||| |||| ||||| ||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  1833809 ttacgactttcctttactccacagatcatagtttgtattggtgtgatattgagtccgaattcacaacagt 1833878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 3847091 - 3846921
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt------tgtgctcactttgatat 95  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||| |||||      |||| ||||||||||||    
T  3847091 ctttatcttttgcttgtggttttgagcttttcactttgattactatattagatctaggtgttgttattattattgttgttgcttgtgttcactttgatat 3846992  T
Q  96 tggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||||    
T  3846991 tggttactactttcctttactccacacatcatagtttgtattagtatgattttgagtccgaattcacaaca 3846921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 10925422 - 10925590
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattg 97  Q
    |||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||| |||    ||| ||||| ||||||||||||||    
T  10925422 ctttatcttttgcttgtggttttgagtttttccctttgattactagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattg 10925521  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
     ||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  10925522 attactactttcctttgctccacacaacatagtttgtattgttgtgattttgagtccgaattcacaaca 10925590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 13137948 - 13137780
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| | ||||||| |||||    
T  13137948 ctttatcttttgcttgtggttttgaggttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattgg 13137849  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||| ||||| ||||||    
T  13137848 ttactactttcctttgctccacacatcataatttgtattggtgtgagttttgagtccgaatttacaaca 13137780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 196877 - 196710
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | || ||||||||||||||| ||||||| |||||||||||||||||||||||   |||| |||||||||||||||    
T  196877 ctttatcttttgcttgtggttttgagcttctcactttgattactagattagatgtaggtgttgttattattgttgttgcttgtgttcactttgatattgg 196778  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||| || |||||||||||||||||||| ||||||||||||||| |||||||  ||||||||||||    
T  196777 ttactattttcctttgctccacacatcataatttgtattggtgtgaatttgagtacgaattcacaaca 196710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 834137 - 833970
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||| | | ||||||||| |||||||||||| ||||| ||   |||| | |||||||||||||    
T  834137 ctttatcttttgcttgtggttttgagcttttcactttgattcccagattagatcttggtgttgttattgttgttattgcttgtgtttactttgatattgg 834038  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  834037 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 50169182 - 50169032
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||| |||||||||||||||||||||||   |||| |||||||||||||||    
T  50169182 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatataggtgttgttattattgttgttgtttgtgttcactttgatattgg 50169083  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  50169082 ttactactttcatttgcttcacacatcatagtttgtattggtgtgattttg 50169032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 49918551 - 49918718
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||| ||| || |||||| ||||||| ||| ||||||| |||||| ||||||| |||    ||| ||||| |||||||||||||||    
T  49918551 tttatcttttgcttgtggatttgtgcttttcattttgattcctagattagatataggtgctgttattgttgattattgcttgtgttcactttgatattgg 49918650  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  49918651 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtctgaatttacaaca 49918718  T

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Target: chr1; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 28265526 - 28265359
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||| ||||||||||  | |||| ||||||||||||| ||||||||||| |||||||||||||||||||   |||| |||||||||||||||    
T  28265526 ctttatcttttggttgtggttttgagctttttactttgattactagattagatctagatgttgttattattgttgttgcttgtgttcactttgatattgg 28265427  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
     ||||| || ||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  28265426 ctactattttcctttactccacacatcatagtttgtattggtgtgattttgagtccgaattcccaaca 28265359  T

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Target: chr1; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 44455359 - 44455528
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||||||| ||||||| |||    ||||||||| |||||||||||||    
T  44455359 cctttatcttttgcttttggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatatt 44455458  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||| ||||  |||| ||||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  44455459 ggttaccacttttcttttctccacatatcatagtttgtattggtgtgattttgagtacgaattcacaaca 44455528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 45644326 - 45644158
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgt-gctcactttgatattg 97  Q
    |||||||||||| ||||||||||  | |||||||||||||| ||| ||||||||||| |||||||||||||||||||   ||| | |  |||||||||||    
T  45644326 ctttatcttttgtttgtggttttgagcttttcactttgattgctagattagatctagatgttgttattattgttgttgcttgttgtttgctttgatattg 45644227  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  45644226 gttactactttcctttgctccacacatcatagtttgtatttgtgtgattttgagtccgaattcacaaca 45644158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 37559835 - 37559664
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaatt-agatctaggtgttgttattattg----ttgtttgtgctcactttgatat 95  Q
    |||||||||||||||||||||||| || |||||||||||||| ||| ||| ||||||||||| ||||||| |||    ||| ||||| ||||||||||||    
T  37559835 cctttatcttttgcttgtggttttgtgcttttcactttgattcctagatttagatctaggtgctgttattgttgattattgcttgtgttcactttgatat 37559736  T
Q  96 tggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  37559735 tggttactactttcctttgctccagacatcatagtttatattggtgtgagttttgagtccgaattcacaaca 37559664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 3157064 - 3157205
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| ||||| |||||||||||||    
T  3157064 cctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatatt 3157163  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattg 138  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  3157164 ggttactactttcctttgctccacacatcatagtttgtattg 3157205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 4552616 - 4552448
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||||||||| |||||||||||||||||||   ||||| | ||||||| |||||    
T  4552616 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctatgtgttgttattattgttgttacttgtgtttactttgaaattgg 4552517  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattcacaaca 166  Q
    ||||||||| ||||| || ||| |||||||||||||||||||||| | |||||||| |||||| |||||    
T  4552516 ttactactttcctttacttcacgcatcatagtttgtattggtgtgaaatttgagtccgaattcgcaaca 4552448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 23555238 - 23555071
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||| ||||||||||||||||  | |||||||| ||||| |||||||||||||||||||||||||| ||||||||   |||| | ||||||| ||||     
T  23555238 ctttatgttttgcttgtggttttgagcttttcactatgattcctaaattagatctaggtgttgttattgttgttgttgcttgtgtttactttgacattga 23555139  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||  |||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||    
T  23555138 ttactacttttctttgctccacacatcattgtttctattggtgcgattttgagtccgaattcacaaca 23555071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 927948 - 927784
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgatta-ctaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtt 100  Q
    |||||||||||| ||||||||||    ||||||||||||||| ||| |||||||||| || ||||| || |||||||||||| | |||||||||||||||    
T  927948 ctttatcttttgtttgtggttttgaacttttcactttgattatctatattagatctaagttttgttgttgttgttgtttgtgattactttgatattggtt 927849  T
Q  101 actacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacag 167  Q
    || |||||||||| |||||||||||||||||  ||||| |||||||||||||| |||||||||||||    
T  927848 accacttccctttactccacacatcatagtt--tattgatgtgattttgagtccgaattcacaacag 927784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 31659439 - 31659606
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||| ||||||| || |||| ||||||||| ||| |||||||| ||||||||||||| |||    ||| ||||| ||| |||||||||||    
T  31659439 tttatcttttgcttatggttttgtgctttttactttgattcctagattagatcaaggtgttgttattgttgattattgcttgtgttcattttgatattgg 31659538  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||  |||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  31659539 ttactacttttcttttctccacacatcatattttatattggtgtgattttgagtccgaattcacaaca 31659606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 30476413 - 30476247
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggt 99  Q
    |||||||||| |||||||||||  | ||||||||||||||| || ||||| |||| ||||||||||||||||||||   |||| | ||||||| ||||||    
T  30476413 tttatcttttacttgtggttttgagcttttcactttgattattagattaggtctaagtgttgttattattgttgttgcttgtgtttactttgaaattggt 30476314  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaac 165  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||| ||||||||  |||||||||||    
T  30476313 tactactttcctttactccacacattatagtttgtattggtgtgagttttgagttcgaattcacaac 30476247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 37503526 - 37503362
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    ||||||||||||||||| |||||| || |||||||||| ||| ||| ||||||||||||||||| |||| |||    ||| ||||| |||||||||||||    
T  37503526 cctttatcttttgcttgcggttttgtgcttttcactttaattcctagattagatctaggtgttgatattgttgattattgcttgtgttcactttgatatt 37503427  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
         |||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37503426 -----ctactttcctttactccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 37503362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 3189532 - 3189708
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgttt-----------------gtgctc 85  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||| |||||||||||||||                 ||| ||    
T  3189532 tttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattgttgttttattattgttgttgcttgtgttc 3189631  T
Q  86 actttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcac 162  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||| ||| ||||||||    
T  3189632 actttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtgattttgtgtccgaattcac 3189708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 3198349 - 3198525
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgttt-----------------gtgctc 85  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||| |||||||||||||||                 ||| ||    
T  3198349 tttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattgttgttttattattgttgttgcttgtgttc 3198448  T
Q  86 actttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcac 162  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||| ||| ||||||||    
T  3198449 actttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtgattttgtgtccgaattcac 3198525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 3207188 - 3207364
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgttt-----------------gtgctc 85  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||| |||||||||||||||                 ||| ||    
T  3207188 tttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattgttgttttattattgttgttgcttgtgttc 3207287  T
Q  86 actttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcac 162  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||| ||| ||||||||    
T  3207288 actttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtgattttgtgtccgaattcac 3207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 13659308 - 13659153
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    ||||||||||||||||||||||| |  |||||| ||||||| ||| ||||||| ||||||||||||||      | ||||| | |||||||| |||||||    
T  13659308 ctttatcttttgcttgtggttttgtacttttca-tttgattcctagattagatttaggtgttgttatt------gcttgtgtttactttgatgttggtta 13659216  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaa 164  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  13659215 ctactttcctttgctccacacattatagtttgtattgatgtgattttgagtccgaattcacaa 13659153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 41361111 - 41361278
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    |||||||||||| ||||||||||  | |||| ||||||||| ||| ||||||| |||||||||||||| |||||||   ||||| | ||||||||||||     
T  41361111 ctttatcttttgtttgtggttttgagctttttactttgattcctagattagatataggtgttgttattgttgttgttacttgtgtttactttgatattga 41361210  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||| ||||| |||||||||||||||||||||||| |||||||  || ||||||||| ||||||||||||    
T  41361211 ttaatactttcctttgctccacacatcatagttt-tattggttagagttttgagtccgaattcacaaca 41361278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 16455817 - 16455984
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgt---gctcactttgatattgg 98  Q
    ||||||||||| |||||||||||  |||||||||||||||||| | ||||||||||  |||||||||||||||||||  |   | | |||||||||||||    
T  16455817 ctttatcttttacttgtggttttgagtttttcactttgattaccagattagatctatatgttgttattattgttgttgcttacgtttactttgatattgg 16455916  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| | |||||| |||| ||| | ||||  |||||||| |||||||||| ||||||||||||    
T  16455917 ttactactttcatttgctacacaaatctttgttttcattggtgtaattttgagtccgaattcacaaca 16455984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 20762874 - 20763021
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||| || |||||||||      ||| |||||||||||||| ||||||| |||    ||| |||   |||||||||||||||    
T  20762874 tttatcttttgcttgtggttttgtgcttttcacttc-----ctagattagatctaggtgctgttattgttgattattgcttgaattcactttgatattgg 20762968  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20762969 ttaatactttcctttgctccacacatcatagtttgtattggtgtgattttgag 20763021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 13316318 - 13316148
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| |||||||||||||||  ||||||||||||||||| ||| |||||||||||||| ||||||| |||    ||| |||   |||||||| |||||     
T  13316318 tttatattttgcttgtggtttg-tgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattga 13316220  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag-tctgaattcacaacagtg 169  Q
    ||||||||| |||||||||||||||| ||| || |||||||||||||||||||  | |||||||||||||||    
T  13316219 ttactactttcctttgctccacacattatatttcgtattggtgtgattttgagaccggaattcacaacagtg 13316148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 8870695 - 8870526
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg---ttgtttgtgctcactttgatattgg 98  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||| ||| ||||||||| || || ||||||   ||| ||||| | ||||||||| | |    
T  8870695 ctttatcttttgcttgtggttttgtatttttcactttgattcctagatttgatctaggttttttttttattgtttttgcttgtgattactttgatactag 8870596  T
Q  99 ttactacttccctttgctccacacatcatagtttgt-attggtgtgattttgagtctgaattcacaacag 167  Q
    ||||||||| |||||| |||||||||  | |||| | ||||||||||||||||| || ||||| ||||||    
T  8870595 ttactactttcctttgttccacacatatttgtttttcattggtgtgattttgagcctaaattcgcaacag 8870526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 51765601 - 51765750
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| ||||||||||||  || ||||||||||| || ||| |||||||||||||||||||||| |||    ||| |||  |||||||   || |||    
T  51765601 tttatcttgtgcttgtggtttg-tgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcactcacttaattagtgg 51765699  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    ||||||||| |||||||||||||||||||| || ||||||||||| |||||    
T  51765700 ttactactttcctttgctccacacatcatatttcgtattggtgtggttttg 51765750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 46065114 - 46065278
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  |  |||||| || |||| || |||||||||||||||||||||||||||||||   |||  | ||||||| |||||    
T  46065114 ctttatcttttgcttgtggttttgagcctttcacatt-attagtagattagatctaggtgttgttattattgttgttgcttgtatttactttga-attgg 46065211  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||| |||  | ||||||||||||||| | ||||  |||| |||| ||||||||| ||||||||||||    
T  46065212 ttacaactatcgtttgctccacacatctttgttttcattg-tgtggttttgagtccgaattcacaaca 46065278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 15820537 - 15820659
Alignment:
Q  36 tttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggttactacttccctttgctccacacatcatagtttgta 135  Q
    ||||||| ||| ||||||||||||||||||| ||   |||| ||||| | ||||||||||| |||||||||| |||||||||||||||||  ||||  ||    
T  15820537 tttgattcctatattagatctaggtgttgttgtt---gttgcttgtgtttactttgatattagttactactttcctttgctccacacatctaagtt--ta 15820631  T
Q  136 ttggtgtgattttgagtctgaattcacaa 164  Q
    |||||| | ||||||||| ||||||||||    
T  15820632 ttggtgag-ttttgagtccgaattcacaa 15820659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 5460103 - 5460253
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctagg--tgttgttattattgttgtttgtgctcactttgatattggt 99  Q
    ||||||||||||||||||||||| || ||| || |||| || ||| ||| ||||||||  |||| || || |||||||||| | | | ||||||||||||    
T  5460103 ctttatcttttgcttgtggttttgtgctttacattttg-ttcctagattcgatctaggtttgttcttgttgttgttgtttgagattattttgatattggt 5460201  T
Q  100 tactacttccc-tttgctccacacatcatagtttgtattggtgtgattttgagt 152  Q
    ||||| ||||| ||| ||| |||||||  ||||  ||||| |||||||||||||    
T  5460202 tactatttcccttttactctacacatctaagtt--tattgttgtgattttgagt 5460253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 19752985 - 19753032
Alignment:
Q  120 cacatcatagtttgtattggtgtg-attttgagtctgaattcacaaca 166  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  19752985 cacatcatagtttgtattggtgtgaaatttgagtctgaattcacaaca 19753032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 37282655 - 37282498
Alignment:
Q  9 ttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggttactac 105  Q
    |||| |||||||||||  ||||||||| | |||| ||| ||||||||||||| |||||||| |||||| |   |||| | ||||| |||||  ||| |||    
T  37282655 tttttcttgtggttttgcgtttttcacct-gatttctagattagatctaggt-ttgttattgttgttggtacttgtggttactttcatattaattattac 37282558  T
Q  106 ttcccttt-gctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||  |||| |||||||||||   |||||  ||||||||||||||||||| ||||||||||||    
T  37282557 ttttcttttgctccacacatttaagttt--attggtgtgattttgagtccgaattcacaaca 37282498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 40282680 - 40282727
Alignment:
Q  96 tggttactacttccctttgctccacacatcatagtttgtattggtgtg 143  Q
    ||||||| |||  ||||||||||||||||||||||||| |||||||||    
T  40282680 tggttaccactctcctttgctccacacatcatagtttgcattggtgtg 40282727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 7816752 - 7816698
Alignment:
Q  210 atattggagagcatggtttgtgattcggtggtttccatgagttcaggaaggatat 264  Q
    |||||| | ||||| |||||  ||| |||||||||||||||||||||||||||||    
T  7816752 atattgaaaagcatcgtttgcaatttggtggtttccatgagttcaggaaggatat 7816698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 19754787 - 19754837
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattca 161  Q
    ||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  19754787 ttgctccacacatcatagtttctattggtgtgaaatttgaatctgaattca 19754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 36683897 - 36683935
Alignment:
Q  86 actttgatattggttactacttccctttgctccacacat 124  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  36683897 actttgatattggttaccactttcctttgctccacacat 36683935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 1050408 - 1050331
Alignment:
Q  88 tttgatattggttactac-ttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||||||||||| |||| ||| || || ||||| |||||  |||||||||||||||||||   |||||||||||    
T  1050408 tttgatattggttactactttccttttacttcatacatcttagtt--tattggtgtgattttgagttcaaattcacaaca 1050331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 20622103 - 20622071
Alignment:
Q  96 tggttactacttccctttgctccacacatcata 128  Q
    |||||||||||| ||||||||||||||||||||    
T  20622103 tggttactactttcctttgctccacacatcata 20622071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 31490293 - 31490328
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtgatttt 148  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31490293 ttgctccacacatca-agtttgtattggtgtgatttt 31490328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 47676103 - 47675936
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggt 99  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||   |||| ||||||||||||||||    
T  47676103 tttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattggt 47676004  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  47676003 tactactttcctttgctccacacatcatagtttgtattggtgtgagttttgtgtccgaattcacaaca 47675936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 27348017 - 27348185
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattg 97  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||| |||    ||||||||| ||||||||||||||    
T  27348017 ctttatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattg 27348116  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  27348117 gttgctactttcctttgctccacacatcataatttgtatttgtgtgattttgagtccgaattcacaaca 27348185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 41317406 - 41317237
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  41317406 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattgg 41317307  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacag 167  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||  |||||||  |||||||||||||    
T  41317306 ttactactttcctttgctccaaacatcatagtttgtattggtgtgagatttgagttcgaattcacaacag 41317237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 8153538 - 8153705
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | ||||||||||||||| || || ||||||||||||||||||||||||||||   |||||||||||||||||||     
T  8153538 ctttatcttttgcttgtggttttgagcttttcactttgattattagatcagatctaggtgttgttattattgttgttgcttgtgctcactttgatattga 8153637  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||    
T  8153638 ttactactttcctttgctccacgcatcatagtttgtattagtgtgattttgagtccgaattcccaaca 8153705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 19502378 - 19502549
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattg 97  Q
    ||||||| || |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||   |||  | ||||||| ||||    
T  19502378 cctttattttgtgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtatttactttgaaattg 19502477  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacagt 168  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  19502478 gttactactttcctttgctccacacatcatagtttgtattagtgtgagttttgagtctgaattcacaacagt 19502549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 23555242 - 23555410
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||| |||||||||||||||||||||| |||    ||| ||||| |||||||||||||||    
T  23555242 tttatcttttgcttgtggtattgtgttttttactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattgg 23555341  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  23555342 ttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 23555410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 47673913 - 47673744
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgt---tgtttgtgctcactttgatattg 97  Q
    |||||||||||||||||||||||| |  |||||||||||||||||| |||||||||||||||||||||||||||   |||||||| ||||||||||||||    
T  47673913 cctttatcttttgcttgtggttttgtacttttcactttgattactagattagatctaggtgttgttattattgttgttgtttgtgttcactttgatattg 47673814  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||| | |||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||    
T  47673813 gttactactttcttttgttccacacatcatagtttgtattggtgtgagttttgtgtccgaattcataaca 47673744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 48489630 - 48489798
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttg----tgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||| ||| |  |||    || |||||||||||||    
T  48489630 cctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgctcatgttcactttgatatt 48489729  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaac 165  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  48489730 ggttactactttcctttgctccacacatcatagttggtattggtgtgattttgagtccgaattcacaac 48489798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 18126845 - 18127015
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||    ||| ||| ||||| |||||||||||||    
T  18126845 cctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattcttgattattgcttgtgttcactttgatatt 18126944  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    | ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  18126945 gattactactttcctttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 18127015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 41648981 - 41648814
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||| ||| |||||||||||||| || |||| ||||| ||   |||| ||||||||||||| |    
T  41648981 ctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgctattgttgttattgcttgtgttcactttgatattag 41648882  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41648881 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 41648814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 14069802 - 14069633
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattg 97  Q
    |||||||||| |||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||| |||||   |||| | ||||||| |||     
T  14069802 cctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgtttactttgaaatta 14069703  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  14069702 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 14069633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 14379830 - 14379661
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattg 97  Q
    |||||||||| |||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||| |||||   |||| | ||||||| |||     
T  14379830 cctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgtttactttgaaatta 14379731  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  14379730 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 14379661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 166
Target Start/End: Complemental strand, 38671190 - 38671025
Alignment:
Q  4 ttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggtt 100  Q
    |||||||||||||||||||||  | |||||||||||||||||| ||| |||||||||||||| |||||||| |||   |||| |||||||||| || |||    
T  38671190 ttatcttttgcttgtggttttgagcttttcactttgattactagatttgatctaggtgttgtcattattgtcgttgcttgtgttcactttgatttttgtt 38671091  T
Q  101 actacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38671090 actattttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 38671025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 36146380 - 36146212
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgt-gctcactttgatattg 97  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||| |||||||||||||||||||   ||| | |  |||||||||||    
T  36146380 ctttatcttttgcttgtggtttttagcttttcactttgattactagattagatctagatgttgttattattgttgttgcttgttgtttgctttgatattg 36146281  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  36146280 gttactactttcctttgctccacacatcatagtttgtatttgtgtaattttgagtccgaattcacaaca 36146212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 25616055 - 25616224
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattg 97  Q
    ||||||||| ||||||||||||| || ||||||||| |||| ||| |||||||||||||||||||||| |||    ||| ||||| ||||||||||||||    
T  25616055 ctttatcttgtgcttgtggttttgtgcttttcacttcgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattg 25616154  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacag 167  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||    
T  25616155 gttactactttcctttgctccatacatcatagtttgtattggtgtgattttgagtacgtattcacaacag 25616224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 35854118 - 35854287
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| |||||||| ||||||| ||||||||||| || ||| |||||||||||||| ||||||| |||    ||||||||| |||||||||||||||    
T  35854118 tttatcttgtgcttgtg-ttttatgcttttcactttgcttcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattgg 35854216  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtct-gaattcacaacagt 168  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  35854217 ttactactttcctttgctccacacatcatagtttgtatttgtgtgattttgagactggaattcacaacagt 35854287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31732938 - 31732761
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||   ||||||||| |||    ||| ||||| ||||||||| |||    
T  31732938 cctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaaaggttgttattgttgattattgcttgtgttcactttgaaatt 31732839  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacagtgttca 173  Q
    ||||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||    
T  31732838 ggttactactttcatttgctccacacatcatagtttgtactggtgtgagttttgagtccgaattcacaacagtcttca 31732761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 4586360 - 4586530
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgtta----ttattgttgtttgtgctcactttgatatt 96  Q
    ||||||||||||| |||||||||| || |||||||||||||||||| ||||||||||||||||||||    ||||| ||| ||||| ||||||||| |||    
T  4586360 cctttatcttttgtttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattgtttattattgcttgtgttcactttgaaatt 4586459  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||||  |||||||| ||||||||||||    
T  4586460 ggttaccactttcctttgctccacacatcatagtttacattggtgtgagatttgagtccgaattcacaaca 4586530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 43864443 - 43864609
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||| |||||||    ||| ||| ||||| |||||||||||||    
T  43864443 cctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatatt 43864542  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcac 162  Q
    | |||| |||| ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  43864543 gattaccactttcctttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcac 43864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 495955 - 495801
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgtt---gtttgtgctcactttgatattgg 98  Q
    |||||||| ||||||||| |||| | ||||||||||||||| ||| |||||||||||||||||||||| |||||   ||||||| | |||||||||||||    
T  495955 ctttatctcttgcttgtgattttctatttttcactttgattcctagattagatctaggtgttgttattgttgttattgtttgtgtttactttgatattgg 495856  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtc 153  Q
    ||||||||| ||||||||||||| |||||| |||||||| |||||||||||||||    
T  495855 ttactactttcctttgctccacatatcataatttgtattagtgtgattttgagtc 495801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 23344169 - 23344332
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    |||||||| || |||| |||||| |||||||||||||||||  || |||| |||||||| |||||||| |||||| ||||| | |||| |||||||||||    
T  23344169 ctttatctctttcttgcggttttgtgtttttcactttgattcgtagattaaatctaggttttgttattgttgttgcttgtggttacttggatattggtta 23344268  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||| |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||    
T  23344269 ctactttcctttgctccacacatcatagttt-tattgatgtgattttgggtctgaattcacaaca 23344332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 48491775 - 48491944
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||| ||||||| ||| |||||||||||| ||||||||| |||    ||| ||||| |||||||||||||    
T  48491775 cctttatcttttgcttgtggttttgtgcttttcattttgattcctatattagatctaggcgttgttattgttgattattgcttgtgttcactttgatatt 48491874  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||| ||||| |||| ||||| |||||| |||||||||||||||||| || ||||||||||||    
T  48491875 ggttactactttcctttactccgcacattatagttggtattggtgtgattttgaatccgaattcacaaca 48491944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 1113852 - 1114021
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg---ttgtttgtgctcactttgatattg 97  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||| |||||||||||||||| ||||| |||   ||| ||||| | |||||||||||     
T  1113852 cctttatcttttgcttgtggttttgtgtttttcattttgattcctagattagatctaggtgttattattgttgttattgcttgtgtttactttgatatta 1113951  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||| |||||| || ||||||||||||    
T  1113952 gttaccactttcctttgctccacacatcatagtttgtattgatgtgagttttgattcggaattcacaaca 1114021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 24525474 - 24525306
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgt-gctcactttgatattg 97  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||||||||||||||   ||| | |  |||||||||||    
T  24525474 ctttatcttttgcttgtggttttgagcttttcactttgattactaaatttgatctaggtgttgttattattgttgttgcttgttgtttgctttgatattg 24525375  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
     |||||||||  ||||||| |||| |||||||||||||||| ||||||||||| | |||||||||||||    
T  24525374 attactacttttctttgctacacatatcatagtttgtattgatgtgattttgaatttgaattcacaaca 24525306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 29991255 - 29991406
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||  || ||||| |||||||| ||| |||||||||||||||||||||| |||    ||  |||||||||||||||||||||    
T  29991255 tttatcttttgcttgtggtttg-tgcttttctctttgattcctatattagatctaggtgttgttattgttgattattacttgtgctcactttgatattgg 29991353  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  29991354 ttactacttttctttgctccacacatcatagtttgtattggtgtgactttgag 29991406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 26417515 - 26417685
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    ||||||||||||||||||||||||  | ||||||||||||||  || |||| ||||||||| ||||||| |||    ||| ||||| | |||||||||||    
T  26417515 cctttatcttttgcttgtggttttgagcttttcactttgattcatagattatatctaggtgctgttattgttgattattgcttgtggttactttgatatt 26417614  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||| ||||||||||||    
T  26417615 ggttactactttcctttactccacatatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 26417685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 167
Target Start/End: Complemental strand, 31105357 - 31105199
Alignment:
Q  9 ttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggttactacttc 108  Q
    ||||||||||||||||  | |||||||||||||| ||| ||||||||| |||||||||||| |||||| ||||| | |||||||||||| |||||||||     
T  31105357 ttttgcttgtggttttgagcttttcactttgattcctagattagatcttggtgttgttattgttgttgcttgtgtttactttgatattgattactacttt 31105258  T
Q  109 cctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacag 167  Q
    ||||| |||||||||||||||||| ||||||||||| ||||| ||  |||||||||||||    
T  31105257 cctttactccacacatcatagttt-tattggtgtgagttttgtgttcgaattcacaacag 31105199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 30024714 - 30024562
Alignment:
Q  12 tgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattggttactacttc 108  Q
    ||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| | ||||||| ||||||||||||||     
T  30024714 tgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggttactacttt 30024615  T
Q  109 cctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||| |     ||||||||||| ||||||| |||||||||||| ||||| ||||||    
T  30024614 cctttgtt-----catcatagtttatattggtatgattttgagtccgaatttacaaca 30024562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 4178975 - 4179122
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| |||||||||||||||  ||||||||||||||||| ||| |||||||||||||| ||||||| |||    ||| ||    |||||||| ||||||    
T  4178975 tttatattttgcttgtggtttg-tgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttacattcactttgttattgg 4179073  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattt 147  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4179074 ttactactttcctttgctccacacatcatagtttgtattggtgtgattt 4179122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 23565033 - 23564874
Alignment:
Q  3 tttatcttttgcttgtggtttta-tgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    ||||||||||||||||||||||  || |||||||||||||| ||| ||||||||||||| |||||||| |||||| ||||| | |||||||||||||| |    
T  23565033 tttatcttttgcttgtggtttttgtgattttcactttgatttctagattagatctaggttttgttattgttgttgcttgtggttactttgatattggtca 23564934  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcaca 163  Q
    ||||||  |||  |||||||||||   |||  |||| |||||||||||||||||||||||||    
T  23564933 ctacttttcttcactccacacatctatgtt--tattagtgtgattttgagtctgaattcaca 23564874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 25766917 - 25766776
Alignment:
Q  9 ttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattggttacta 104  Q
    ||||||||||| |||  ||||||||||||||||  ||| |||||||||||||| ||||||| |||    ||| ||| |||||||||| ||||||||||||    
T  25766917 ttttgcttgtgatttg-tgtttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcgctcactttgttattggttacta 25766819  T
Q  105 cttccctttgctccacacatcatagtttgtattggtgtgattt 147  Q
    |||  ||||||||||||||||||| || |||||||||||||||    
T  25766818 cttttctttgctccacacatcatatttcgtattggtgtgattt 25766776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 12097084 - 12096969
Alignment:
Q  50 tagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtgatt 146  Q
    ||||||||||||||||| |||||||||||   |||| |||||||||||||||||||||||| |||||  ||||  ||||||||||| || ||||||||||    
T  12097084 tagatctaggtgttgttgttattgttgttgattgtgttcactttgatattggttactactttcctttattccaagcatcatagtttata-tggtgtgatt 12096986  T
Q  147 ttgagtctgaattcaca 163  Q
    ||||||| |||||||||    
T  12096985 ttgagtccgaattcaca 12096969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 174
Target Start/End: Original strand, 48409034 - 48409183
Alignment:
Q  29 ttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattggttactacttccctttgctccacacat 124  Q
    |||||||||||||  ||| |||||||||||||| ||||||| |||    ||| |||  ||||||||| ||||||||||||||| ||||||||||||||||    
T  48409034 ttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacat 48409133  T
Q  125 catagtttgtattggtgtgattttgagtct-gaattcacaacagtgttcat 174  Q
    |||| || ||||||||||||||| ||| |  |||||||||||||| |||||    
T  48409134 catatttcgtattggtgtgattt-gagaccagaattcacaacagttttcat 48409183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 36574488 - 36574324
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    ||||||||||| ||||||||||| |||||||||| |||||| ||| |||||||||| || |||||||| |||||||    || | | |||||||||||||    
T  36574488 ctttatctttttcttgtggttttgtgtttttcac-ttgattcctagattagatctaagt-ttgttattgttgttgtggcctgagattactttgatattgg 36574391  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||| || || |||||| ||||||||||  ||||  |||||||||||   ||||||||||||||||||||    
T  36574390 ttaatattttcctttgatccacacatctaagtt--tattggtgtgagaattgagtctgaattcacaaca 36574324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 30843365 - 30843284
Alignment:
Q  86 actttgatattggttactacttcccttt-gctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacagt 168  Q
    |||||||||||||||||||||| ||||| ||||||||| ||  |||||  |||||||||||||||| |||||||||||||||||    
T  30843365 actttgatattggttactactttccttttgctccacacttctaagttt--attggtgtgattttgattctgaattcacaacagt 30843284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 6430441 - 6430496
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  6430441 ttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 6430496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 4510394 - 4510339
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattcacaaca 166  Q
    |||||||||||||||||||||||||||||||| | |||||||| ||||||||||||    
T  4510394 ttgctccacacatcatagtttgtattggtgtgaaatttgagtccgaattcacaaca 4510339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 4512236 - 4512181
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattcacaaca 166  Q
    |||||||||||||||||||||||||||||||| | |||||||| ||||||||||||    
T  4512236 ttgctccacacatcatagtttgtattggtgtgaaatttgagtccgaattcacaaca 4512181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 31519118 - 31519165
Alignment:
Q  29 ttttcactttgattactaaattagatctaggtgttgttattattgttg 76  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  31519118 ttttcactttgattcctagattagatctaggtgttgttattattgttg 31519165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 39731573 - 39731723
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatattgg 98  Q
    |||||||| ||||||||||||  || ||||||||||| || ||| ||||||||||||||||||||||    ||| ||| |||  | ||||||| ||||||    
T  39731573 tttatcttgtgcttgtggtttg-tgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccactttgttattgg 39731671  T
Q  99 ttactacttccctttgctccacacatcatagtttg-tattggtgtgattttg 149  Q
    |||||||||  ||||| |  ||| |||||| |||| |||||||||| |||||    
T  39731672 ttactacttttctttgttttacatatcatactttgttattggtgtggttttg 39731723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 2360827 - 2360774
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattcacaa 164  Q
    |||||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  2360827 ttgctccacacatcatagtttgtattggtgtgaattttgagtccaaattcacaa 2360774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 43504117 - 43503974
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt-attgttgtttg--tgctcactttgatattggt 99  Q
    |||||||| |||||||| ||||||| |||||||||||||| ||| ||||||||||| |||| || || ||| ||| |||    | ||||||| |  ||||    
T  43504117 tttatcttgtgcttgtg-ttttatgcttttcactttgattcctagattagatctagctgtttttgttgattattgcttgcacacacactttgttggtggt 43504019  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtga 144  Q
    ||| |||  |||||||||||||||||||| || ||||||||||||    
T  43504018 taccactctcctttgctccacacatcatatttcgtattggtgtga 43503974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 12097839 - 12097789
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattag 52  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||||    
T  12097839 ctttatcttttgcttgtggttttgagcttttcactttgattactagattag 12097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 22270266 - 22270321
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattcacaaca 166  Q
    ||||||||||||||||||||||||||| |||| | |||||||| ||||||| ||||    
T  22270266 ttgctccacacatcatagtttgtattgctgtgaaatttgagtccgaattcataaca 22270321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 30814715 - 30814770
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattcacaaca 166  Q
    ||||||||||||||||| |||||| ||||||| | |||||||| ||||||||||||    
T  30814715 ttgctccacacatcatattttgtactggtgtgaaatttgagtccgaattcacaaca 30814770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 2580269 - 2580199
Alignment:
Q  94 attggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||| |||| |||||| ||||||||||||||| | ||||  ||||||||||||||  ||| ||||||||||||    
T  2580269 attgattaccacttccttttgctccacacatctttgtttacattggtgtgatttt--gtccgaattcacaaca 2580199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 24790302 - 24790355
Alignment:
Q  96 tggttactacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    ||||||| |||| || ||||||||||||||||| |||| ||||||||| |||||    
T  24790302 tggttaccactttccgttgctccacacatcatactttgcattggtgtgtttttg 24790355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 6359800 - 6359768
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    ||||||||||||||||||||||||||| |||||    
T  6359800 ttgctccacacatcatagtttgtattgatgtga 6359768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 22834975 - 22834807
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattg 97  Q
    |||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||| ||||| ||   |||| | ||||||||||||    
T  22834975 cctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgttattacctgtgtttactttgatattg 22834876  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22834875 gttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 22834807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 44700451 - 44700284
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    ||||||| |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||   |||| | |||||||||||||    
T  44700451 ctttatcctttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgatattgg 44700352  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||  ||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||||    
T  44700351 ttactacttttctttgctccatgcatcatagtttgtattggtgtgattttgagtccgaattcaaaaca 44700284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 23391881 - 23391712
Alignment:
Q  2 ctttatcttttgcttgtggttttatgttttt-cactttgattactaaattagatctaggtgttgttattattgttgttt---gtgctcactttgatattg 97  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||   ||| ||||||||||||||    
T  23391881 ctttatcttttgcttgtggttttgtgttttttcactttgattactagattagatctaggtgttgttattattgttgtttcttgtgttcactttgatattg 23391782  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||| ||||| ||  ||||||||||||    
T  23391781 gttattactttccttttctccacacatcatagtttgtattggtgtgagttttgtgttcgaattcacaaca 23391712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 7762467 - 7762635
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| |||    ||  ||||| |||||||||||||||    
T  7762467 tttatcttttgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattacttgtgttcactttgatattgg 7762566  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagt-ctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||| ||||||    
T  7762567 ttactactttcctttgctccacacatcatagtttgtattggtgtagttttgagtcctgaattgacaaca 7762635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 9666438 - 9666270
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctca----ctttgatattg 97  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||| |||  |  | |    |||||||||||    
T  9666438 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgtagttgcttgttatttgctttgatattg 9666339  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  9666338 gttactactttcctttgctccacagatcatagtttgtattggtgtgattttgagtccgaattcacaaca 9666270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 40734696 - 40734865
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||| ||| || ||| |||||||||| ||| |||||||||||||| |||||||    ||| ||  ||||| |||||||||||||    
T  40734696 cctttatcttttgcttgtggatttgtgctttgcactttgattcctagattagatctaggtgctgttattttttattatttcttgtgttcactttgatatt 40734795  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  40734796 ggttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagaccgaattcacaaca 40734865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 40735581 - 40735750
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||| ||| || ||||||||||| || ||| |||||||||||||| ||||||| |||    ||||||||| |||||||||||||    
T  40735581 cctttatcttttgcttgtggatttgtgcttttcactttggttcctatattagatctaggtgctgttattgttgattattgtttgtgttcactttgatatt 40735680  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||    
T  40735681 ggttactactttcctttgctccacacatcataatttgtattggtgtgattttgataccgaattcacaaca 40735750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 29196358 - 29196189
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgt-gctcactttgatattg 97  Q
    |||||||||||||||||||||||  | |||||||||||||||| | |||||||||||||||||||||||||||||||   ||| | |  |||||||||||    
T  29196358 ctttatcttttgcttgtggttttgagcttttcactttgattaccagattagatctaggtgttgttattattgttgttgcttgttgtttgctttgatattg 29196259  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  29196258 gttactactttcctttgctccacacatcatagtttgtattggtgtgagatttgagtccgaattcacaaca 29196189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 31314641 - 31314808
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||| || |||||||||||||||||||||||   |||| | ||||| ||||| |    
T  31314641 ctttatcttttgcttgtggttttgagcttttcactttgattactagattatatttaggtgttgttattattgttgttgcttgtgtttactttaatattag 31314740  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  31314741 ttattactttcctttgctccatacatcatagtttgtattggtgtgattttgagtcggtattcacaaca 31314808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 37408660 - 37408829
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||||||||||||||| |||  || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||||||||||||||||| |||||||    
T  37408660 tttatcttttgcttgtgatttagtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgctcactttaatattgg 37408759  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacagt 168  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||| |||||| | ||||||||||||||    
T  37408760 ttactactttcctttgctccacacatcatattttgtattgatgtgactttgaggccgaattcacaacagt 37408829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 51399013 - 51399182
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| |  |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| | |||||||||||||||||    
T  51399013 cctttatcttttgcttgtggttttgtacttttcactttgattcctagattagatctaggtgctgttattgttgattattgctagtgctcactttgatatt 51399112  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    | || |||||| ||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  51399113 gttttctactttcctttgctccatacatcatagtttgtattggtatgattttgagtccgaattcacaaca 51399182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 19683855 - 19683703
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||| |||||||||||||| ||||||| |||    ||| ||||| |||||||||||||||    
T  19683855 tttatcttttgcttgtggttttgtgtttttcacttttattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgg 19683756  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  19683755 ttactactttcctttgctccaaacatcatagtttgtattggtgtgagtttgag 19683703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 39153333 - 39153164
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgtt---gtttgtgctcactttgatattg 97  Q
    |||||||||| |||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||||| |   | ||||| | ||||||| ||||    
T  39153333 cctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgctgccgcttgtgtttactttgaaattg 39153234  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||    
T  39153233 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagcccgaattctcaaca 39153164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 761045 - 761211
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||| ||| |||||||||||||| || |||| ||||| ||   || | |||||||||| ||||    
T  761045 ctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgctattgttgttattgcttgagttcactttgattttgg 761144  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  761145 ttactactttcctttgctccacacatcatagtttgtattggtgtga-tttgagtccgaattcacaaca 761211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 9581482 - 9581652
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    ||||||| || ||||||||||||| || ||||||||||||||  || |||||||||||||| ||||||| |||    ||| |||||||||||||||||||    
T  9581482 cctttattttgtgcttgtggttttgtgcttttcactttgattcatagattagatctaggtgctgttattgttgattattgcttgtgctcactttgatatt 9581581  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagt-ctgaattcacaaca 166  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  9581582 ggttactactttcctttgcttcacacatcatagtttatattggtgtgattttgagtccggaattcacaaca 9581652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 29813260 - 29813430
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    ||||||||||||| ||||||||||  | ||||||||||||||  || |||||||||||||| ||||||| |||    ||||||||| |||||||||||||    
T  29813260 cctttatcttttggttgtggttttgagcttttcactttgattcttagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatatt 29813359  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
     ||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  29813360 agttactacttttctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 29813430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 9636090 - 9635939
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| |||||||| ||| ||| |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| ||||| |||||||||||||||    
T  9636090 tttatcttgtgcttgtgattt-atgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgg 9635992  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9635991 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttgag 9635939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 5236424 - 5236257
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||| ||| || |||||||||||||| ||| |||||||||||| | | ||||| |||    ||| ||||| |||||||||||| |     
T  5236424 tttatcttttgcttgtggatttgtgcttttcactttgattcctagattagatctaggagctcttattgttgattattgcttgtgttcactttgatatcga 5236325  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5236324 ttactactttcctgtactccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 5236257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 23410301 - 23410131
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttc--actttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||  ||||||   ||||||||||||| |||||||||||||||||||| |||| |||||   |||| ||||||||||||     
T  23410301 ctttatcttttgcttgtggttttgagttttttttactttgattactagattagatctaggtgttgttaatatttttgttgcttgtgttcactttgatata 23410202  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
     |||||||||| |||||| ||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||    
T  23410201 tgttactactttcctttgatccacacatcatagtttgtattgatgtgagttttgtgtccgaattcacaaca 23410131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 29811067 - 29811237
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatatt 96  Q
    ||||||||||||||||||||||||  | |||||||||||||| ||| |||||||||||||| |||||||    ||| ||| ||||| || |||||| |||    
T  29811067 cctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttctctttgaaatt 29811166  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||||| ||||||||||||| |||||| ||||||||||||||| ||||||||  ||||||||||||    
T  29811167 ggttactactttcctttgctccacaaatcatattttgtattggtgtgagttttgagttcgaattcacaaca 29811237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 7764666 - 7764834
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||||||||| |||||||||| || |||||||||||||| | | |||||||||||||| ||||||| |||    ||| ||||| |||||||||||||||    
T  7764666 tttatcttttgtttgtggttttgtgcttttcactttgattccaagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgg 7764765  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagt-ctgaattcacaaca 166  Q
    ||||||||| ||||| || |||||||||||||||||||||||||  |||||||| | ||||||||||||    
T  7764766 ttactactttcctttacttcacacatcatagtttgtattggtgtagttttgagtccggaattcacaaca 7764834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 27305681 - 27305519
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggt--gttgttattattgttgtttgtgctcactttgatattggtt 100  Q
    ||||||||||| |||||||||| ||||||||||||| | | ||| |||||||||||||  ||| || || |||||| ||||  | |||||||||||||||    
T  27305681 tttatcttttgtttgtggttttgtgtttttcacttt-actcctagattagatctaggttggttattgttgttgttgcttgttgttactttgatattggtt 27305583  T
Q  101 actacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  27305582 actactttcctttgctccacacatcatagtt--tattggtgtgattttgagtccgaattcacaaca 27305519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 29682556 - 29682728
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattg 97  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||  ||||||||||||| || |||| ||||| ||   |||  ||||||| || |||    
T  29682556 cctttatcttttgcttgtggttttgagtttttcactttgattcctaggttagatctaggtgctgctattgttgttattgcttgtattcactttaattttg 29682655  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga--ttttgagtctgaattcacaacagt 168  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||    
T  29682656 attactactttcctttgctccacacatcatagtttgtattggtgtgattttttgtgtcggaattcacaacagt 29682728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 21350975 - 21350810
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    ||||||||| ||||||||||| |  | |||||||||||||| ||| |||||||||| ||||||||||| |||||||||||| | ||||||||||||||||    
T  21350975 ctttatcttatgcttgtggttatgagcttttcactttgattcctagattagatctaagtgttgttattgttgttgtttgtgtttactttgatattggtta 21350876  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacag 167  Q
    |||||| |||||||| |||||||| |  |||  |||||||||| ||||||||| |||||||||||||    
T  21350875 ctactttcctttgcttcacacatctttattt-cattggtgtgagttttgagtccgaattcacaacag 21350810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 2075047 - 2074882
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgt--tgttattattgttgtttgtgctcactttgatattggt 99  Q
    ||||||||||||||||||||||| |||||||||||| | || ||| |||| |||| ||| |  | || ||||||||| ||||| | | ||||||||||||    
T  2075047 ctttatcttttgcttgtggttttgtgtttttcactt-gtttcctagattaaatctgggtttattattgttattgttgcttgtggttattttgatattggt 2074949  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacag 167  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  2074948 tactactttcctttgctccacacatcatagttt-tattggtgtgattttgggtccgaattcacaacag 2074882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 9634787 - 9634620
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| |||||||| | | ||| |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| ||||| |||||||||||||||    
T  9634787 tttatcttgtgcttgtgatct-atgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgg 9634689  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag-tctgaattcacaacag 167  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||  | |||||||||||||    
T  9634688 ttactactttcctttgctccaca-atcatagtttgtattggtgtgattttgagaccggaattcacaacag 9634620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 166
Target Start/End: Original strand, 32891302 - 32891458
Alignment:
Q  4 ttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggttact 103  Q
    |||||||||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||      |||| ||||| | ||||| ||||||||||||    
T  32891302 ttatcttttgcttgtggttttgagtttttcactttgattcctatattagatctaggtgttgtt------gttgcttgtgtttactttaatattggttact 32891395  T
Q  104 acttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||| ||||||||||||||||||||||||  |||||||||| ||||||||| ||| ||||||||    
T  32891396 actttcctttgctccacacatcatagttt-cattggtgtgagttttgagtccgaagtcacaaca 32891458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 5260289 - 5260138
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| |||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||| |||    ||| |||  ||||||||| ||||||    
T  5260289 tttatattttgcttgtggtttg-tgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttgcactcactttgttattgg 5260191  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||    
T  5260190 ttactactttcctttgctccacacatcatagttcgtattggtttgactttgag 5260138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 45095365 - 45095514
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||  |||||| | ||||||||  || |||||||||| ||| ||||||| |||    ||| |||||||||||||||||||||    
T  45095365 tttatcttttgcttgtggtttg-tgttttactctttgattcatagattagatctatgtgctgttattgttgattattgcttgtgctcactttgatattgg 45095463  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  45095464 ttactactttcctttgctctacacatcatagtttgtattgatgtgattttg 45095514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 51352105 - 51351941
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    ||||||||||| ||||||||||| ||||||||| ||||||| ||| ||||||||||||| |||||||| ||| || |   |||| | |||||||||||||    
T  51352105 ctttatcttttacttgtggttttgtgtttttca-tttgattcctagattagatctaggt-ttgttattgttgctgctgcttgtgattactttgatattgg 51352008  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||| |||| ||||||||||||||||| |||| | ||||| |||||||||||||| ||||||||||||    
T  51352007 ttaccactttcctttgctccacacatcgtagtat-tattgatgtgattttgagtccgaattcacaaca 51351941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 16499225 - 16499369
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    ||||||||||||||||||||||| |  |||||| ||||||| ||| ||||||| ||||||||||||||      | ||||| | |||||||| |||||||    
T  16499225 ctttatcttttgcttgtggttttgtacttttca-tttgattcctagattagatttaggtgttgttatt------gcttgtgtttactttgatgttggtta 16499317  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtgattttgagtc 153  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  16499318 ctactttcctttgctccacacattatagtttgtattgatgtgattttgagtc 16499369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 5258110 - 5257959
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| |||||||||||||||  || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| |||   |||||||| ||||||    
T  5258110 tttatattttgcttgtggtttg-tgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattgg 5258012  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  5258011 ttactactttcctttgctccacacatcatagttcgtattggtgtgactttgag 5257959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 23200102 - 23199954
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| ||||||||||||  ||||||||| |||| || ||| |||||||||||||||| ||||| |||    ||| |||  ||||||||| ||||||    
T  23200102 tttatcttatgcttgtggtttg-tgtttttcattttgtttcctagattagatctaggtgtt-ttattgttgattattgcttgcactcactttgttattgg 23200005  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||| |||||    
T  23200004 ttactactttcctttgctccacatatcatactttgtattggtgtggttttg 23199954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 37406981 - 37407057
Alignment:
Q  90 tgatattggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||| | ||||||||||||    
T  37406981 tgatattggttactactttcctttgctccacacatcatattttgtagtggtgtgactttgaggccgaattcacaaca 37407057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 32744390 - 32744288
Alignment:
Q  27 gtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggttactacttccctttgctccacacatca 126  Q
    |||||||||||||||| ||| ||||||||||||||||||||| ||||||||   ||||   ||||| |||||||||||||| |  |||||||| ||||||    
T  32744390 gtttttcactttgatttctagattagatctaggtgttgttatcattgttgt---tgct---tttgaaattggttactactttctattgctccatacatca 32744297  T
Q  127 tagtttgta 135  Q
    |||||||||    
T  32744296 tagtttgta 32744288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 23197903 - 23197761
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgt-gctcactttgatattggtta 101  Q
    |||||||| ||||||||||||  ||||||||| |||| || ||| |||||||||| |||||    ||||||||| || | |||  ||||  |||||||||    
T  23197903 tttatcttgtgcttgtggtttg-tgtttttcattttgtttcctagattagatctatgtgtt----ttattgttgattattgcttgctttattattggtta 23197809  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    |||||| ||||||||||||| |||||| |||||||||||||| |||||    
T  23197808 ctactttcctttgctccacatatcatactttgtattggtgtggttttg 23197761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 47304575 - 47304629
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  47304575 ttgctccacacatcatagtttgtattgttgtgattttaagtccgaattcagaaca 47304629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 801388 - 801436
Alignment:
Q  96 tggttactacttccctttgctccacacatcatagtttgtattggtgtga 144  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||    
T  801388 tggttactactttcctttgctccacacatcatatttcgtattggtgtga 801436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 4160105 - 4160059
Alignment:
Q  121 acatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  4160105 acatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 4160059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 31340071 - 31340018
Alignment:
Q  113 tgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||||||||  | ||||||||||    
T  31340071 tgctccacacattatagtttgtattggtgtaattttgagtacgcattcacaaca 31340018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 6095446 - 6095414
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||||||||    
T  6095446 ttgctccacacatcatagtttgtattggtgtga 6095414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 43403586 - 43403554
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||||||||    
T  43403586 ttgctccacacatcatagtttgtattggtgtga 43403554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 34491505 - 34491557
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgt-gattttgagtctgaattcaca 163  Q
    ||||||||||||| |||||||||||||||||  | |||||||| |||||||||    
T  34491505 ttgctccacacattatagtttgtattggtgtaaaatttgagtccgaattcaca 34491557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 5887404 - 5887235
Alignment:
Q  2 ctttatcttttgctt--gtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatatt 96  Q
    |||||||||||||||  ||||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||||||||   |||| |||||||||||||    
T  5887404 ctttatcttttgcttttgtggttttaagtttttcattttgattactagattagatttaggtgttgttattattgttgttgcttgtgttcactttgatatt 5887305  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  5887304 ggttactactttcctttgctccacatatcatagtttgtattggtgtgattttgagtccgaattcacaaca 5887235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 42428399 - 42428244
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattg 97  Q
    ||||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||| |||||   |||| ||||||||||||||    
T  42428399 cctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgttcactttgatattg 42428300  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagt 152  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  42428299 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagt 42428244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 13239953 - 13240118
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattggt 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||   ||||| | ||||| | ||||||    
T  13239953 tttatcttttgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattgttgttgttgcttgtgtttactttaaaattggt 13240052  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaac 165  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  13240053 tactactttcctttactccacacatcatagtttgtattagtgtgattttgagttcgaattcacaac 13240118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 42426204 - 42426035
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattat---tgttgtttgtgctcactttgatattg 97  Q
    ||||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||   ||||| ||||| ||||||||||||||    
T  42426204 cctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgatgttgcttgtgttcactttgatattg 42426105  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||||    
T  42426104 gttactactttcttttgctccacacatcatagtttgtatttgtgtgagttttgagttcgaattcacaaca 42426035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 538221 - 538393
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||| ||||||||||||||||||   ||||| | ||||||| |||||    
T  538221 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctagatgttgttattattgttgttgcttgtgtttactttgaaattgg 538320  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacagtgt 170  Q
    ||| ||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  538321 ttattactttcctttgctccacacatcatagtttatattggtgtgagttttgagtctgaattcacaatagtgt 538393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 16649801 - 16649635
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggt 99  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| |  |   |||| ||||||||||  ||||    
T  16649801 tttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgctactacttgtgttcactttgattgtggt 16649702  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  16649701 tactactttcctttgctccacacatcatagtttgtattggtatgattttgagttcgaattcacaaca 16649635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 31183183 - 31183341
Alignment:
Q  11 ttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggttactactt 107  Q
    ||||||||||||||  | |||||||||||||||||| ||||||| ||||||||||||||||| |||||   |||| || |||||||||| ||||||||||    
T  31183183 ttgcttgtggttttgagcttttcactttgattactagattagatataggtgttgttattatttttgttgcttgtgttccctttgatattagttactactt 31183282  T
Q  108 ccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
     ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  31183283 tcctttgctccacacatcatggtttgtattggtgtgattttgagtccgaattcacaaca 31183341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 8565918 - 8565748
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt------tgtgctcactttgatat 95  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||| |||||      |||| |||||||| |||    
T  8565918 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgttgcttgtgttcactttgttat 8565819  T
Q  96 tggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||||||||||| ||  |||||||||||    
T  8565818 tggttactactttcctttgctccacacatcatagtttatattagtgtgattttgaatccaaattcacaaca 8565748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 28750624 - 28750455
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattg 97  Q
    ||||||| |||||||||||||||| || ||||||||| |||||||| ||||||||||||||||||||||||||||||   ||||| | ||||| | ||||    
T  28750624 cctttatattttgcttgtggttttgtgcttttcacttggattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttaaaattg 28750525  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||  |||||||||||    
T  28750524 gttactactttcctttgctccacacatcataatttgtattggtgtgagttttgagtccaaattcacaaca 28750455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 30682890 - 30682722
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||  ||| || |||||||||||||| ||| |||||||||||||||||||||| |||    ||| ||||| |||||||||||||||    
T  30682890 tttatcttttgcttgtgaatttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattgg 30682791  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  30682790 ttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgtattcacaaca 30682722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 39468518 - 39468347
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||| |||| |||||||| || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||||||||| |||||||||||||    
T  39468518 cctttatcttgtgctcgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatatt 39468419  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacag 167  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||  |||||||||||||    
T  39468418 ggttactactttcctttgctccacacatcatagtttgtattggtgtaagttttgagttcgaattcacaacag 39468347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 13488406 - 13488569
Alignment:
Q  7 tcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg---ttgtttgtgctcactttgatattggttact 103  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||   ||| ||||| ||||||||| |||||||| |    
T  13488406 tcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgctattgattgtgttcactttgaaattggttatt 13488505  T
Q  104 acttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||| ||||| |||||||||||||| |||||||||||||||  |||||||| ||||||||||||    
T  13488506 actttcctttactccacacatcatattttgtattggtgtgagatttgagtccgaattcacaaca 13488569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 19806562 - 19806729
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg---ttgtttgtgctcactttgatattg 97  Q
    ||||||||||||||||||||||||  | |||||||||||||||||| ||||||| ||||||||||||||||||   |||  | || ||||||| | ||||    
T  19806562 cctttatcttttgcttgtggtttttagcttttcactttgattactagattagatttaggtgttgttattattgctattgcctatgttcactttaaaattg 19806661  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  19806662 gttactactttcctttgccccacacatcatagtttgtattggtgag-ttttgagtccgaattcacaaca 19806729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 33831878 - 33832047
Alignment:
Q  2 ctttatcttttgcttgtggttttatg-tttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattg 97  Q
    ||||||||||||||||||| |||  | ||||||||||||||| ||| ||||||| |||||| || |||| ||||| ||   |||| |||||||||| |||    
T  33831878 ctttatcttttgcttgtggctttgagctttttcactttgattcctagattagatttaggtgctgctattgttgttattgcttgtgttcactttgattttg 33831977  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacag 167  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||    
T  33831978 gttactactttcctttgctccacacatcatagtttgtatttgtgtaattttgagtccgaattcacaacag 33832047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 533966 - 534127
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggttac 102  Q
    ||||||||||||||||||||||  | |||||||||||||||||| ||||| | |   |||| |||||||||||| |||||   ||||||| |||||||||    
T  533966 tttatcttttgcttgtggttttgagattttcactttgattactagattaggtgt---tgttattattattgttgcttgtgtctactttgaaattggttac 534062  T
Q  103 tacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  534063 tactttcctttgctccacacatcatagtttctattggtgtgagttttgagtccgaattcacaaca 534127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 32637023 - 32637190
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattg 97  Q
    |||||||||| |||||||| ||||  |||||||||||||||||||| |||||||||||||||||||||||||| ||||   |||| | | | ||| |||     
T  32637023 cctttatcttgtgcttgtgattttgagtttttcactttgattactagattagatctaggtgttgttattattgatgttgcttgtgtttagtgtgaaattt 32637122  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaa 164  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  32637123 gttactactttcctttactccacacatcatagtttgtattggtgtgagttttgaatccgaattcacaa 32637190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 37439341 - 37439494
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattg 97  Q
    |||||||||| ||||||||||||| || |||||| ||||||||||| |||||| |||||||||||||||||||||||   ||||| | ||||||| ||||    
T  37439341 cctttatcttatgcttgtggttttgtgcttttcattttgattactagattagacctaggtgttgttattattgttgttgcttgtgtttactttgaaattg 37439440  T
Q  98 gttactacttccctttgctccacacatcatag---tttgtattggtgtgattttg 149  Q
    |||||||||| | |||||||||||||||||||   ||||||||||||||||||||    
T  37439441 gttactactt-cttttgctccacacatcatagttttttgtattggtgtgattttg 37439494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 30182790 - 30182941
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| |||||||| |||| || ||||||||||| || ||| |||||||||||||||||||||| |||    |||||||   |||||||| ||||||    
T  30182790 tttatcttgtgcttgtg-ttttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgtttgcattcactttgttattgg 30182888  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  30182889 ttactactttcctttgctccacacatcatagtttgttttggtgtgattttgag 30182941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 42927099 - 42927260
Alignment:
Q  8 cttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattggttacta 104  Q
    |||||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||||| |||||||   ||||| | ||||||||||| ||| |||    
T  42927099 cttttgcttgtggttttgagtttttcactttgattcctagattagatctaggtgttgttattgttgttgttgcttgtgtttactttgatattagttgcta 42927198  T
Q  105 cttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||| ||||||||||||||||| | ||||   ||||| |||||||||||  ||||||||||||    
T  42927199 ctttcctttgctccacacatctttgttttcgttggtatgattttgagttcgaattcacaaca 42927260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 25412962 - 25413112
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||  || ||||| |||||||| ||| ||||||| |||||| ||||||| |||    ||| |||||||||||| |||||||     
T  25412962 tttatcttttgcttgtggtttg-tgcttttctctttgattcctagattagatataggtgctgttattgttgattattgcttgtgctcacttggatattga 25413060  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttga 150  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  25413061 ttactaatttcctttgctccacacatcatagttcgtattggtgtgattttga 25413112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 16409681 - 16409830
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| |||||||| ||||||| ||||||||||| || ||| |||||||||||||||||||||| |||    ||| |||  | ||||||| || |||    
T  16409681 tttatcttgtgcttgtg-ttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccactttgttagtgg 16409779  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  16409780 ttactactttcctttgctccacacatcatactttgtattggtgtgattttg 16409830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 26178088 - 26178255
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| |||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||    ||| |||  | ||||||| || |||    
T  26178088 tttatcttgtgcttgtg-ttttatgcttttcactttgattcctagattagatctaggtgttgttatcattgattattgcttgcacacactttgttagtgg 26178186  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag-tctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||| || || ||||||||||| ||||||| || ||||||||||||    
T  26178187 ttactactttcctttgctccacacatcttacttcgtattggtgtggttttgagatcggaattcacaaca 26178255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 13343262 - 13343411
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| |||||||||||||||  || |||||||||||||| ||| |||||||||||||||||||||| |||    ||| |||   |||||||| ||||||    
T  13343262 tttatattttgcttgtggtttg-tgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgcattcactttgttattgg 13343360  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| ||||    
T  13343361 ttactactttcctttgctccacacatcatagttcgtattagtgtgactttg 13343411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 36074009 - 36073861
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||| ||||||||||| |||  || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| |||   |||||||| ||||||    
T  36074009 tttatgttttgcttgtgatttg-tgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattgg 36073911  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgatttt 148  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  36073910 ttattactttcctttgctccacacatcatagtttgtattggtgtggtttt 36073861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 3075629 - 3075549
Alignment:
Q  87 ctttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  3075629 ctttgatattggttattactttcctttgctccacacatcatagtttgtattggtgtgagtttttagtccgaattcacaaca 3075549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 26170968 - 26171119
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttat----tattgttgtttgtgctcactttgatattgg 98  Q
    |||||||| |||||||| ||||||| |||||| ||||||| ||| |||||||||||||||||||||     ||| ||| |||  | ||||||| || ||     
T  26170968 tttatcttgtgcttgtg-ttttatgcttttcattttgattcctagattagatctaggtgttgttatcatcgattattgcttgcacacactttgttagtgc 26171066  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| ||||||||||||||||| || || ||||||||||| |||||||    
T  26171067 ttactactttcctttgctccacacatcttacttcgtattggtgtggttttgag 26171119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 16452286 - 16452402
Alignment:
Q  9 ttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggttactacttc 108  Q
    ||||||||||||||||  | |||||| ||||||| ||| ||||||||||  |||||||||| |||||| ||||| | || || ||||||||||||| ||     
T  16452286 ttttgcttgtggttttgagcttttcaatttgattcctagattagatctaactgttgttattgttgttgcttgtgtttacgttaatattggttactatttt 16452385  T
Q  109 cctttgctccacacatc 125  Q
    ||||| |||||||||||    
T  16452386 cctttactccacacatc 16452402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 9789092 - 9789021
Alignment:
Q  96 tggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag-tctgaattcacaaca 166  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| || ||||||||||||    
T  9789092 tggttactactttcctttgctccacacatcatactttgtattggtgtggttttgagatcggaattcacaaca 9789021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 18441512 - 18441439
Alignment:
Q  96 tggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag-tctgaattcacaacagt 168  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||| ||||||| || ||||||||||||||    
T  18441512 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaattcacaacagt 18441439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 40147555 - 40147610
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  40147555 ttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 40147610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 38747298 - 38747355
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattcacaacagt 168  Q
    |||||||||||||||||||||||||||||||| | ||||||||  |||||||||||||    
T  38747298 ttgctccacacatcatagtttgtattggtgtgaaatttgagtccaaattcacaacagt 38747355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 9049317 - 9049217
Alignment:
Q  5 tatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtgctcactttgatattggtta 101  Q
    |||||||||||||||||||| |||||||||| || ||| ||| ||||||| ||| | |||||||| |||||||   ||||| | ||||||||||||||||    
T  9049317 tatcttttgcttgtggttttgtgtttttcac-ttaatttctatattagatttagat-ttgttattgttgttgtttcttgtggttactttgatattggtta 9049220  T
Q  102 cta 104  Q
    |||    
T  9049219 cta 9049217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 30897612 - 30897770
Alignment:
Q  5 tatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttg-tgctcactttgatattggttact 103  Q
    ||||||||||||||| ||||||| ||| ||| ||| || ||| ||||||| || ||  ||||||| |||||| ||| |||| ||||| ||||| ||||||    
T  30897612 tatcttttgcttgtgattttatgctttacac-ttggttcctagattagatttaagt-ctgttattgttgttgcttgatgct-actttaatatttgttact 30897708  T
Q  104 acttccc-tttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||| ||| |||||| ||||  ||||  ||||||||||||||| |||  ||||||||||||    
T  30897709 acttcccttttactccacgcatctaagtt--tattggtgtgattttaagtacgaattcacaaca 30897770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 42309930 - 42309827
Alignment:
Q  60 tgttgttattattgttgtttgtgctcactttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaatt 159  Q
    |||||||||| |||||| ||||| | ||| |||||| |||||  |||| |||||||| || ||||| | ||||  |||| ||||||||||||||  ||||    
T  42309930 tgttgttattgttgttgcttgtgattactatgatataggttatcactttcctttgctgcatacatctttgttttcattgatgtgattttgagtcctaatt 42309831  T
Q  160 caca 163  Q
    ||||    
T  42309830 caca 42309827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 28278609 - 28278641
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    ||||||||||||||||| |||||||||||||||    
T  28278609 ttgctccacacatcatattttgtattggtgtga 28278641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 12743892 - 12743728
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggttac 102  Q
    |||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||||||| |||||||||    
T  12743892 tttatcttttgcttgtagttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgcttgtgtttactttgaaattggttac 12743793  T
Q  103 tacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||    
T  12743792 tactttcctttgctccacacaacatagtttgtattggtgtgagttttgagtccgaattcacaaca 12743728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 36463363 - 36463196
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  ||||||| |||||||||| |||||||||||||||||||||||||||||||||   |||| | |||||||||||||    
T  36463363 ctttatcttttgcttgtggttttgagtttttcgctttgattaccaaattagatctaggtgttgttattattgttgttgcttgtgtttactttgatattgg 36463264  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  36463263 ttattactttcctttactccacacatcatagtttgtattagtgtgattttgagtccgaattcacaaca 36463196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 56178603 - 56178438
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||| || |||||||||| ||| ||| ||||||||||||||||||||||    ||| ||| ||||| |||||||||||||||    
T  56178603 tttatcttttgcttgtggttttgtgcttttcactttcattcctagattagatctaggtgttgttattgtttattattgcttgtgttcactttgatattgg 56178504  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaa 164  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  56178503 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaa 56178438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 26175605 - 26175436
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg---ttgtttgtgctcactttgatattg 97  Q
    ||||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||   ||| ||||| | ||||||| ||||    
T  26175605 cctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgctattgcttgtgtttactttgaaattg 26175506  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  26175505 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 26175436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 46147363 - 46147195
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||| |||||||||||||||||   |||| |||||||||||||||    
T  46147363 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtattgttattattgttgttgcttgtgttcactttgatattgg 46147264  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||| | ||||||||||||    
T  46147263 ttactactttcctttgctccacacatcatagtttgcattggtgtgagttttgaggcggaattcacaaca 46147195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 47038383 - 47038219
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgtt---gtttgtgctcactttgatattgg 98  Q
    ||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||| |||||   ||||||| | |||||||||||||    
T  47038383 ctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgttattgtttgtgtttactttgatattgg 47038284  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcaca 163  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  47038283 ttactactttcctttgttccacacatcatagtttgtattggtgtgattttgagtccaaattcaca 47038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 29254695 - 29254861
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattatt---gttgtttgtgctcactttgatattggt 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||| ||||||| ||||||||    
T  29254695 tttatcttttgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattattgtcgttgtttgtgttcactttaatattggt 29254794  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtgattttgag-tctgaattcacaaca 166  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||||| || || ||||||||||||    
T  29254795 tactactt-tctttgctccacacatcatagtttgtattagtgtgattttaagttccgaattcacaaca 29254861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 12739517 - 12739353
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggttac 102  Q
    |||||||||||||||||||||| || |||||||||||||||||  ||||||||||||||||||||||||| ||| ||||| | ||||||| |||||||||    
T  12739517 tttatcttttgcttgtggttttgtgcttttcactttgattacttgattagatctaggtgttgttattattattgcttgtgtttactttgaaattggttac 12739418  T
Q  103 tacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||| | ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  12739417 tactttcttttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 12739353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 5872021 - 5872183
Alignment:
Q  5 tatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatta---ttgttgtttgtgctcactttgatattggtta 101  Q
    |||||||||||| |||||||  | |||||||||||||||||| |||||||||||||||||||||||   |||||||||||| ||||||||||||||||||    
T  5872021 tatcttttgcttttggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgtttgtgttcactttgatattggtta 5872120  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||| | ||||||||||    
T  5872121 ctactttcctttgctccacacatc--agtttgtattggtgtgattttgagtccggattcacaaca 5872183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 34570381 - 34570214
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||| || ||||||||||||||  || |||||||||||||||||||||| |||    ||||||||| ||| |||||||||||    
T  34570381 tttatcttttgcttgtggttttgtgcttttcactttgattcttagattagatctaggtgttgttattgttgattattgtttgtgttcattttgatattgg 34570282  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||| || |||||| |||||    
T  34570281 ttactactttcctttgctccacacatcatagtttatattggtgtgattttgaatccgaattcgcaaca 34570214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 45687154 - 45686987
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgt-gctcactttgatattg 97  Q
    |||||||| ||||||||||||||  | |||||||||||||||||| ||| |||||||||||||||||||||||||||   ||| | |  |||||||||||    
T  45687154 ctttatctgttgcttgtggttttgagcttttcactttgattactagatt-gatctaggtgttgttattattgttgttgcttgttgtttgctttgatattg 45687056  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45687055 gttactactttcctttgctccatacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 45686987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 48893610 - 48893443
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    |||||||||||||||||| |||| || ||||||||||||||  |  |||||||||||||| ||||||| ||||| ||   |||| | |||||||||||||    
T  48893610 ctttatcttttgcttgtgattttgtgcttttcactttgattcttggattagatctaggtgctgttattgttgttattgcttgtgtttactttgatattgg 48893511  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48893510 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 48893443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 48143245 - 48143417
Alignment:
Q  3 tttatcttttgcttgtggttttatg----tttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgata 94  Q
    ||||||||||||||||| |||| ||    ||||||||||||||| ||| |||||||||||||||||||||| |||    ||| ||||| |||||||||||    
T  48143245 tttatcttttgcttgtgattttgtgcttttttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgata 48143344  T
Q  95 ttggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagt-ctgaattcacaaca 166  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  48143345 ttggttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtccggaattcacaaca 48143417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 52082630 - 52082463
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    ||||||||||||||||||||||||| |||||  ||||||| ||| || ||||||||||| ||||||| |||    ||| ||||| |||||||||||||||    
T  52082630 tttatcttttgcttgtggttttatgcttttctttttgattcctagataagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgg 52082531  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  52082530 ttactactttcctttgttccacacatcataatttgtattggtgtgattttgagtccgaattcacaaca 52082463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 5370049 - 5369897
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| ||||| ||||||||||||||     
T  5370049 tttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattga 5369950  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  5369949 ttactactttcctttactccacacatcatagtttgtattggtgtgattttgag 5369897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 37740824 - 37740996
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||| |||||||    ||| ||| || || |||||||||||||    
T  37740824 cctttatcttttgcttgtggttttgtgcttttcactttgattcctacattagatctaggtgctgttattgttgattattgattctgttcactttgatatt 37740923  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacagt 168  Q
    | ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  37740924 gattactactttcctgtgctccacacatcatagtttgtattggtgtgagttttgagtccgaatttacaacagt 37740996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 52467326 - 52467159
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattg 97  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||||||||| |||||||||||||||    ||| ||||  | ||||||||||||    
T  52467326 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctatgtgttgttattattgatgattgcttgtctttactttgatattg 52467227  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaa 164  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  52467226 gttaccactttcctttgcttcacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 52467159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 54199877 - 54199706
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatatt 96  Q
    ||||||| |||||||||||| ||| || ||||||||||||||  || |||||||||||||| |||||||    ||| ||| ||||| ||||||||||| |    
T  54199877 cctttatattttgcttgtggatttgtgcttttcactttgattcttagattagatctaggtgatgttattgctgattattgcttgtgttcactttgatact 54199778  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacagt 168  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  54199777 ggttactactttcctttgctccatacatcatcgtttgtattggtgtgattttgagtccgaattcacaacagt 54199706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 52095329 - 52095162
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||| ||||||||||| || ||||| |||||| | ||| |||||||||||||||||||||| |||    ||  ||||| ||||||||||||||     
T  52095329 tttatcttttccttgtggttttgtgcttttctctttgactcctagattagatctaggtgttgttattgttgattattacttgtgttcactttgatattga 52095230  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  52095229 ttactactttcctttgttccacacgtcatagtttgtattggtgtgattttgagtccgaattcacaaca 52095162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 9927428 - 9927258
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||| ||| || |||||||||||||| ||| |||| ||||||||| ||||||| |||    ||| ||||| | |||||||||||    
T  9927428 cctttatcttttgcttgtggatttgtgcttttcactttgattcctagattaaatctaggtgctgttattgttgattattgcttgtgtttactttgatatt 9927329  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||| ||||||| |||||||||||||||||||||||| |||||||| || ||||||||| ||||||||||||    
T  9927328 ggtaactactttcctttgctccacacatcatagtttatattggtgcgagttttgagtccgaattcacaaca 9927258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 4588155 - 4588320
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    |||||||||||||||||| |||| || |||||||||||||| ||| ||||||| | ||| |||||||| |||||||||||| |  |||||||| ||||||    
T  4588155 ctttatcttttgcttgtgattttgtgcttttcactttgattcctatattagatattggttttgttattgttgttgtttgtgattgctttgatagtggtta 4588254  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtga--ttttgagtctgaattcacaaca 166  Q
    ||| || |||||||||||||||||| ||| | |||||||||||  ||||||||| ||||||||||||    
T  4588255 ctattttcctttgctccacacatcaaagtat-tattggtgtgagtttttgagtccgaattcacaaca 4588320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 6542151 - 6541985
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    ||||||||||| |||||| |||| ||||||||||||| ||| ||| ||||||||||||| |||||||| |||||| ||||| | ||||||||||||||||    
T  6542151 ctttatctttttcttgtgattttgtgtttttcactttaattcctagattagatctaggttttgttattgttgttgcttgtgattactttgatattggtta 6542052  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaacagt 168  Q
     ||||| |||||||||||||||||| ||| | ||||| ||||| ||||  ||| ||||||||||||||    
T  6542051 ttactttcctttgctccacacatcaaagtat-tattgatgtgagttttatgtccgaattcacaacagt 6541985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 31474346 - 31474512
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgt---tgtttgtgctcactttgatattg 97  Q
    ||||||||||| |||| || |||| || |||||||||| ||| ||| |||||||||||||||||||||| ||||   |||||||| | ||||||||||||    
T  31474346 cctttatctttagcttttgattttgtgcttttcactttaattcctagattagatctaggtgttgttattgttgttgttgtttgtgtttactttgatattg 31474445  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
     ||||||||| | |||||| |||||||||| ||||||||||||||||  ||||||| ||||||||||||    
T  31474446 attactactttcatttgctacacacatcattgtttgtattggtgtga--ttgagtccgaattcacaaca 31474512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 29999715 - 29999644
Alignment:
Q  80 gtgctcactttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29999715 gtgctcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgattttgag 29999644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 37229693 - 37229531
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggt--gttgttattattgttgtttgtgctcactttgatattggt 99  Q
    ||||||||||| ||| ||||||| || |||||||||| ||| |||||||||||||||||  ||| || || || ||| ||||  | ||||||||||||||    
T  37229693 ctttatcttttacttatggttttgtgcttttcacttt-attcctaaattagatctaggttggttattgttgttattgcttgttgttactttgatattggt 37229595  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaa 164  Q
    ||||||||||| |||||||||||| |||||||| ||||||| | |||||||||| ||||||||||    
T  37229594 tactacttcccattgctccacacaacatagttt-tattggttttattttgagtccgaattcacaa 37229531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 36994719 - 36994795
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt 78  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36994719 ctttatcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgtt 36994795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 5207811 - 5207651
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggttac 102  Q
    ||||||| |||| ||||||||| || ||||||||| |||| ||||||||||||||||| ||| |||| |||||| ||| | | ||||||||||   ||||    
T  5207811 tttatctgttgcatgtggttttgtgcttttcactt-gattcctaaattagatctaggt-ttgatattgttgttgcttgaggttactttgatatcaattac 5207714  T
Q  103 tacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||| ||||||||||||||| |||| ||| |||||||||||||||||||||| ||| ||||||    
T  5207713 tactttcctttgctccacacaccata-tttatattggtgtgattttgagtctgcattaacaaca 5207651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 13992232 - 13992112
Alignment:
Q  29 ttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattggttactacttccctttgctccacacat 124  Q
    |||||||||||||  ||| |||||||||||||| ||||||| |||    ||| |||  ||||||||| ||||||||||||||| ||||||||||||||||    
T  13992232 ttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacat 13992133  T
Q  125 catagtttgtattggtgtgat 145  Q
    |||| || |||||||||||||    
T  13992132 catatttcgtattggtgtgat 13992112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5429878 - 5429988
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatatt 96  Q
    |||||||||||| |||||||||||  | |||||||||||||| ||| |||||||||||||| |||||||    ||| ||||||||| |||||||||||||    
T  5429878 cctttatcttttacttgtggttttgagcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatatt 5429977  T
Q  97 ggttactactt 107  Q
    | |||||||||    
T  5429978 gattactactt 5429988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 50262542 - 50262487
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattcacaaca 166  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  50262542 ttgctccacacatcatagtttgtattggtgtgaaatttgagtctgaattcacaaca 50262487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3913776 - 3913876
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtt 100  Q
    ||||| |||||| |||||||||||||  |||||||||||||| ||| ||||||| ||| || | ||||| || ||| ||||| | |||||||||||||||    
T  3913776 cctttttcttttacttgtggttttatacttttcactttgattcctagattagatatagatgctcttattgttattgcttgtgtttactttgatattggtt 3913875  T
Q  101 a 101  Q
    |    
T  3913876 a 3913876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 24969890 - 24970030
Alignment:
Q  28 tttttcactttgattactaaattagatctaggtgttg---ttattattgttgtttgtgctcactttgatattggttactacttccctttgctccacacat 124  Q
    |||||||||| ||||| || |||||||||||||||     || || |||||| ||||| | | |||||||||||||||||||| |||||||| |||||||    
T  24969890 tttttcacttagattagtagattagatctaggtgtctactttcttgttgttggttgtgattattttgatattggttactactttcctttgct-cacacat 24969988  T
Q  125 catagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    | | ||||  ||  ||||||||||||||  ||||||||||||    
T  24969989 ctttgttttcatcagtgtgattttgagttcgaattcacaaca 24970030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 41639746 - 41639801
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtg-attttgagtctgaattcacaaca 166  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||||||||||||    
T  41639746 ttgctccacacatcatagtttgtattgatgtgaaatttgagtctgaattcacaaca 41639801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 48142348 - 48142206
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    |||||||||||| ||||||||| ||||||||||||| |||| ||| ||||  | | | |||| || ||  |||||||||   | ||||| ||||||||||    
T  48142348 ctttatcttttgattgtggtttaatgtttttcactt-gattcctagattat-tgttgttgttattgttgctgttgtttgatgttactttaatattggtta 48142251  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtgattt 147  Q
     ||||| |||||||||||||||||  ||||| ||||||||||||||    
T  48142250 ttactttcctttgctccacacatctaagttt-tattggtgtgattt 48142206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 36994851 - 36994898
Alignment:
Q  120 cacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  36994851 cacatcatagtttgtattggtgtgagttttgagtcagaattcacaaca 36994898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 31495271 - 31495130
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt---attgttgtttgtgctcac--tttgatattg 97  Q
    |||||||| |||||||| ||||||| ||||||||||| || ||| |||||||||||||| |||| |    ||| ||| |||  | |||  |||| |  ||    
T  31495271 tttatcttgtgcttgtg-ttttatgcttttcactttgtttcctagattagatctaggtgctgttttgttgattattgcttgcacacacactttgttgatg 31495173  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggt 140  Q
    |||||||||| |||||||||||||||||||| || ||||||||    
T  31495172 gttactactttcctttgctccacacatcatatttcgtattggt 31495130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 2210040 - 2210072
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||||||||    
T  2210040 ttgctccacacatcatagtttgtattggtgtga 2210072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 29056555 - 29056610
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctag 58  Q
    |||||||||||| |||||||||| |||||||||| |||||| ||| |||||||||||    
T  29056555 ctttatcttttgtttgtggttttgtgtttttcac-ttgattcctagattagatctag 29056610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 51338325 - 51338392
Alignment:
Q  53 atctaggtgttgttattattgttgtttgtgctcactttgatattggttactacttccctttgctccac 120  Q
    |||||||| |||||||| |||||| |||||   |||||||||||| ||||||||| | ||||||||||    
T  51338325 atctaggttttgttattgttgttgcttgtgactactttgatattgattactactttcatttgctccac 51338392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 29999772 - 29999719
Alignment:
Q  7 tcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtg 61  Q
    |||||||||||||||||  |||||||| |||||||| ||| ||||||||||||||    
T  29999772 tcttttgcttgtggtttg-tgtttttctctttgattcctagattagatctaggtg 29999719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 5280672 - 5280635
Alignment:
Q  88 tttgatattggttactacttccctttgctccacacatc 125  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  5280672 tttgatattggttactacttacctttactccacacatc 5280635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 168
Target Start/End: Original strand, 34496053 - 34496110
Alignment:
Q  109 cctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaacagt 168  Q
    ||||||||||||||||| | ||||  ||||||||||||||||  | ||||||||||||||    
T  34496053 cctttgctccacacatctttgttttcattggtgtgattttga--ccgaattcacaacagt 34496110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 37754850 - 37754777
Alignment:
Q  88 tttgatattggttactacttcccttt-gctccacacatcatagtttgtattggtgtgattttgagtctgaattcac 162  Q
    |||||||||||||| || ||| |||| ||||||||||||  |||||  |||||| ||||||||||| |||||||||    
T  37754850 tttgatattggttaataattctcttttgctccacacatctaagttt--attggtttgattttgagtatgaattcac 37754777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 5409036 - 5408869
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||  || ||||| |||||||| ||| |||||||||||||||||||||| |||    ||| |||||||||||||||||||||    
T  5409036 tttatcttttgcttgtggtttg-tgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttgtgctcactttgatattgg 5408938  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtct-gaattcacaaca 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||    
T  5408937 ttactactttcctttgctccacacatcatagtttgtattggtgtgactttgagactggaattcacaaca 5408869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 5413361 - 5413194
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||  || ||||| |||||||| ||| |||||||||||||||||||||| |||    ||| |||||||||||||||||||||    
T  5413361 tttatcttttgcttgtggtttg-tgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttgtgctcactttgatattgg 5413263  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtct-gaattcacaaca 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||    
T  5413262 ttactactttcctttgctccacacatcatagtttgtattggtgtgactttgagactggaattcacaaca 5413194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 28137379 - 28137211
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattg 97  Q
    |||||||||||||||||||||| | || |||||||||||||| ||| |||||||||| ||||||||||| | ||| ||   |||| | ||||||||||||    
T  28137379 cctttatcttttgcttgtggttatgtgcttttcactttgattcctatattagatctatgtgttgttattgtcgttattgcttgtgtttactttgatattg 28137280  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  28137279 gttactactttcctttgctccacacgtcatagtttgtattggtgtgattttgagaccgaattcacaaca 28137211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9183000 - 9182857
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| |  |||||||||||||| ||| |||||||||||||||||||||| |||    ||| ||||| |||||||||||||    
T  9183000 cctttatcttttgcttgtggttttgtacttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatatt 9182901  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggt 140  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  9182900 ggttactactttcctttgctccacacatcatagtttgtattggt 9182857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 3038895 - 3038729
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttg-tgctcactttgatattg 97  Q
    |||||||||||||||||||||||    |||||||||||||||||| ||||||||||||||||||||||||||||||   ||| || |  |||||||||||    
T  3038895 ctttatcttttgcttgtggttttgaacttttcactttgattactatattagatctaggtgttgttattattgttgttacttgttgtttgctttgatattg 3038796  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaa 164  Q
    |||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||  ||||||||||    
T  3038795 gttattactttcctttgctcgacacatcatagtttgtattggtctgattttgagttcgaattcacaa 3038729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 26954251 - 26954091
Alignment:
Q  9 ttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgt---gctcactttgatattggttactac 105  Q
    |||| ||||||||||| || |||||||||||||| ||| |||||||||||||| ||||||| ||||| ||| |   | | ||||||| ||||||||||||    
T  26954251 tttttcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgttatttcttatgtttactttgaaattggttactac 26954152  T
Q  106 ttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    || | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26954151 tttcttttgctccacacatcatagtttgtattggtgtgattttgagtccgaattcacaaca 26954091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 33160317 - 33160169
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattggt 99  Q
    ||||||||||| |||||||||| || |||||||||||||||||| |||||||||||||||||||| ||||||||||   |||  | ||||||| ||||||    
T  33160317 tttatcttttgtttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttaatattgttgttgcttgtatttactttgaaattggt 33160218  T
Q  100 tactacttccctttgctccacacatcatagtttgtattggtgtgatttt 148  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||    
T  33160217 tactattttcctttgctccacacatcatagtttgtattggtatgatttt 33160169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 16569220 - 16569389
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg---ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||||  | |||||||||||||| ||| |||||||||||||| || |||| |||   ||| ||| | |||||||||| ||||    
T  16569220 ctttatcttttgcttgtggttttgagcttttcactttgatttctagattagatctaggtgctgctattgttgttattgcttgagttcactttgattttgg 16569319  T
Q  99 ttactac-ttccctttgctccacacatcatagtt-tgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||| |||| |||||||||||||||||||||   |||||||||||||||||||| ||||||||||||    
T  16569320 ttactactttccttttgctccacacatcatagttgaatattggtgtgattttgagtccgaattcacaaca 16569389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 16452288 - 16452127
Alignment:
Q  9 ttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattggttacta 104  Q
    |||||||||||||||  || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| ||||  |||||||| ||||||||||||    
T  16452288 ttttgcttgtggtttg-tgcttttcactttgattcctagattagatctaggtgatgttattgttgattattgcttgtattcactttgttattggttacta 16452190  T
Q  105 cttccctttgctccacacatcatagtttgtattggtgtgattttgag-tctgaattcacaaca 166  Q
    ||| ||||| ||||||||||||||||| ||||||||||||||||||| || ||||||||||||    
T  16452189 ctttcctttactccacacatcatagttcgtattggtgtgattttgagatcggaattcacaaca 16452127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 5406166 - 5406025
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt-attgttgtttgtgctcactttgatattggtta 101  Q
    ||||||||||| |||||||||  || ||||| |||||||| ||| |||||||||||||| | ||||| ||| ||| ||||||||||||| ||||||||||    
T  5406166 tttatcttttgtttgtggtttg-tgcttttctctttgattcctagattagatctaggtgctattattgattattgcttgtgctcactttaatattggtta 5406068  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtga 144  Q
    ||||||  |||| ||||||||||||||||||||||||||||||    
T  5406067 ctacttttctttactccacacatcatagtttgtattggtgtga 5406025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 5410491 - 5410350
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt-attgttgtttgtgctcactttgatattggtta 101  Q
    ||||||||||| |||||||||  || ||||| |||||||| ||| |||||||||||||| | ||||| ||| ||| ||||||||||||| ||||||||||    
T  5410491 tttatcttttgtttgtggtttg-tgcttttctctttgattcctagattagatctaggtgctattattgattattgcttgtgctcactttaatattggtta 5410393  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtga 144  Q
    ||||||  |||| ||||||||||||||||||||||||||||||    
T  5410392 ctacttttctttactccacacatcatagtttgtattggtgtga 5410350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 14521649 - 14521478
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtt---tgtgctcactttgatattgg 98  Q
    ||||||||| |||||||||||||  | |||||||||||||| ||| ||||||||||||||||||| |||||||||||   |||| | ||||||| |||||    
T  14521649 ctttatcttatgcttgtggttttgagcttttcactttgattcctagattagatctaggtgttgttgttattgttgttgcttgtgtttactttgaaattgg 14521550  T
Q  99 ttactacttcc----ctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||| | |    |||||||||||||||||||||||  |||||||||| ||||||||| ||||||||||||    
T  14521549 ttactacgtacttttctttgctccacacatcatagttt-cattggtgtgagttttgagtccgaattcacaaca 14521478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 31404641 - 31404472
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||||||||||||||  || ||| | |||||||| ||| |||||||||||||| ||||||| |||    ||| ||||||||||||||||||||     
T  31404641 tttatcttttgcttgtggtttg-tgctttcctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttgatattga 31404543  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctg-aattcacaacagt 168  Q
    |||||| || ||||||||||||||||||||||| ||||||| ||||||||  ||| | |||||||||||||    
T  31404542 ttactattttcctttgctccacacatcatagttcgtattggagtgattttttgtccgaaattcacaacagt 31404472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 30834502 - 30834332
Alignment:
Q  3 tttatcttttgcttgtggttt-tatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattg 97  Q
    ||||| ||||||||||||||| | | |||||||||||||||  || |||||||||||||| ||||||| |||    ||| |||   |||||||| |||||    
T  30834502 tttatattttgcttgtggtttgtgtttttttcactttgattcatagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattg 30834403  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctg-aattcacaacag 167  Q
    ||||||| || |||||||||||||||||||| || ||||||||||||||||||| | | ||||||||||||    
T  30834402 gttactattttcctttgctccacacatcatatttcgtattggtgtgattttgagaccgaaattcacaacag 30834332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 2171496 - 2171342
Alignment:
Q  3 tttatcttttgcttgtggttttatgttttt---cactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatat 95  Q
    |||||||| |||||||| ||||||||||||   |||||||||| ||| |||||||||||||| ||||||| |||    ||| |||  | ||||||| ||     
T  2171496 tttatcttgtgcttgtg-ttttatgttttttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcacacactttgttag 2171398  T
Q  96 tggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  2171397 tggttactactttcctttgctccacacatcatagttcgtattggtgtgactttgag 2171342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 33211157 - 33211084
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgtt 75  Q
    ||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||||| ||||| |||||    
T  33211157 ctttatcttttgcttgtggttttgtgattttcactttgattcctagattagatctaggtgttattattgttgtt 33211084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 22963566 - 22963508
Alignment:
Q  109 cctttgctccacacatcatagtttgtattggtgtgattttgagtct-gaattcacaaca 166  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22963566 ccttagctccacacatcatagtttgtattggtgtgattttgagtctggaattcacaaca 22963508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 23824827 - 23824885
Alignment:
Q  109 cctttgctccacacatcatagtttgtattggtgtgattttgagtct-gaattcacaaca 166  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23824827 ccttagctccacacatcatagtttgtattggtgtgattttgagtctggaattcacaaca 23824885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 602958 - 602903
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  602958 ttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 602903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 3072638 - 3072579
Alignment:
Q  85 cactttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtga 144  Q
    ||||||| || |||||||||||| |||||||||||||||||||| || ||||||||||||    
T  3072638 cactttgttagtggttactactttcctttgctccacacatcatatttcgtattggtgtga 3072579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 412387 - 412434
Alignment:
Q  96 tggttactacttccctttgctccacacatcatagtttgtattggtgtg 143  Q
    |||||||||||| |||||||||||||||||||| || |||||||||||    
T  412387 tggttactactttcctttgctccacacatcatacttggtattggtgtg 412434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 257308 - 257245
Alignment:
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    |||||| |||||||||||||||| ||| ||  |||||||||||||||||||  ||||||||||||    
T  257308 ctactttcctttgctccacacattataatta-tattggtgtgattttgagttcgaattcacaaca 257245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 17758346 - 17758378
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||||||||    
T  17758346 ttgctccacacatcatagtttgtattggtgtga 17758378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 144
Target Start/End: Original strand, 5043951 - 5043982
Alignment:
Q  113 tgctccacacatcatagtttgtattggtgtga 144  Q
    ||||||||||||||||||||||||||||||||    
T  5043951 tgctccacacatcatagtttgtattggtgtga 5043982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 4045614 - 4045717
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    ||||||||||| || |||||||| | |||||||||| ||||  || ||||||||||||| ||| || | || |||||||   | ||||||||||||||||    
T  4045614 ctttatcttttactcgtggttttgtttttttcactt-gattcttagattagatctaggt-ttgctagtgttattgtttgaagttactttgatattggtta 4045711  T
Q  102 ctactt 107  Q
    ||||||    
T  4045712 ctactt 4045717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 3808550 - 3808518
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    |||||||||| ||||||||||||||||||||||    
T  3808550 ttgctccacatatcatagtttgtattggtgtga 3808518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 17763313 - 17763345
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    ||||||||||||||||||||| |||||||||||    
T  17763313 ttgctccacacatcatagtttatattggtgtga 17763345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 21589252 - 21589284
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    ||||||||||||||||||||| |||||||||||    
T  21589252 ttgctccacacatcatagtttatattggtgtga 21589284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 20384 - 20216
Alignment:
Q  1 cctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttatt----attgttgtttgtgctcactttgatatt 96  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| |||||||    ||| ||| ||||| ||||||||| |||    
T  20384 cctttatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttaattattgcttgtgttcactttgacatt 20285  T
Q  97 ggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaaca 166  Q
    ||||||||| | |||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||    
T  20284 ggttactaccttcctttgctccacacatcatagtttgtattggtatga-gttgagtccgaattcacaaca 20216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 114804 - 114955
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||||| ||||| ||||| || |||||||||||||| ||| ||||||| |||||||||||||| |||    ||| ||||| |||||||||||||||    
T  114804 tttatctttttcttgttgttttgtgcttttcactttgattcctagattagatataggtgttgttattgttgattattgattgtgttcactttgatattgg 114903  T
Q  99 ttactacttccctttgctccacacatcatag-tttgtattggtgtgattttg 149  Q
    ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  114904 ttattactttcctttgctccacacatcatagttttgtattggtgtgattttg 114955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1668 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 1470 - 1301
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgt---ttgtg-ctcactttgatattg 97  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||  ||||| |   |||||  | ||||| ||||||    
T  1470 ctttatcttttgcttgtggttttatgtttttcactttaattcctagattagatctaggtgctgttatcgttgttattacttgtgtttaactttaatattg 1371  T
Q  98 gttactacttccctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaaca 166  Q
     ||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||  ||||||||||||    
T  1370 attactactttcctttgctccacacatcatagattgtattggtgtgagttttgtgttcgaattcacaaca 1301  T

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Target: scaffold0006 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 149069 - 148914
Alignment:
Q  2 ctttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattgttgtttgtgctcactttgatattggtta 101  Q
    ||||||||||||||||||||||| |  |||||| ||||||| ||| ||||||| ||||||||||||||      | ||||| | |||||||| |||||||    
T  149069 ctttatcttttgcttgtggttttgtacttttca-tttgattcctagattagatttaggtgttgttatt------gcttgtgtttactttgatgttggtta 148977  T
Q  102 ctacttccctttgctccacacatcatagtttgtattggtgtgattttgagtctgaattcacaa 164  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  148976 ctactttcctttgctccacacattatagtttgtattgatgtgattttgagtccgaattcacaa 148914  T

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Target: scaffold0002 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 434736 - 434887
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| |||||||| |||| || |||||||||||||| ||| |||||||||||||| ||||||| |||    ||| |||    |||||| ||| |||    
T  434736 tttatcttgtgcttgtg-ttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgattgaaaacactttaataatgg 434834  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  434835 ttactactttcctttgctccacacatcatagttcgtattggtgtgactttgag 434887  T

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Target: scaffold0491 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 11125 - 10976
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| ||||||||||||  |||||||||||||| || ||| |||||||||||||||||||||| |||    ||| |||  | ||||| |  |||||    
T  11125 tttatcttgtgcttgtggtttg-tgtttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccacttagtcattgg 11027  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||| |||||    
T  11026 ttactactttcctttgctccacatatcatactttgtattggtgtggttttg 10976  T

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Target: scaffold0491; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 8699 - 8550
Alignment:
Q  3 tttatcttttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattgg 98  Q
    |||||||| ||||||||||||  || ||||||||||| || ||| |||||||||||||||||||||| |||    ||| |||  | ||||| |  |||||    
T  8699 tttatcttgtgcttgtggtttg-tgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccacttagtcattgg 8601  T
Q  99 ttactacttccctttgctccacacatcatagtttgtattggtgtgattttg 149  Q
    ||||||||| ||||||||||||  |||||| |||||||||||||| |||||    
T  8600 ttactactttcctttgctccacgtatcatactttgtattggtgtggttttg 8550  T

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Target: scaffold0286 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 11853 - 11919
Alignment:
Q  85 cactttgatattggttactacttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    ||||||| || |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  11853 cactttgttagtggttactactttcctttgctccacacatcatagttcgtattggtgtgactttgag 11919  T

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Target: scaffold1519 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 1125 - 1269
Alignment:
Q  10 tttgcttgtggttttatgtttttcactttgattactaaattagatctaggtgttgttattattg----ttgtttgtgctcactttgatattggttactac 105  Q
    ||||||||||||||  || |||||||||||||  ||| |||||||||||||| ||||||| |||    ||| |||   |||| |||  ||||||||||||    
T  1125 tttgcttgtggtttg-tgcttttcactttgatacctagattagatctaggtggtgttattgttgattattgcttgcattcacattgtcattggttactac 1223  T
Q  106 ttccctttgctccacacatcatagtttgtattggtgtgattttgag 151  Q
    |  |||||| |||||||||||||||| |||||||||||| ||||||    
T  1224 tatcctttgttccacacatcatagttcgtattggtgtgactttgag 1269  T

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Target: scaffold0466 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 7646 - 7678
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||||||||    
T  7646 ttgctccacacatcatagtttgtattggtgtga 7678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 17849 - 17817
Alignment:
Q  112 ttgctccacacatcatagtttgtattggtgtga 144  Q
    ||||| |||||||||||||||||||||||||||    
T  17849 ttgctacacacatcatagtttgtattggtgtga 17817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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