View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18223_low_6 (Length: 457)

Name: NF18223_low_6
Description: NF18223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18223_low_6
NF18223_low_6
[»] chr3 (40 HSPs)
chr3 (201-447)||(21419822-21420068)
chr3 (18-101)||(21420168-21420251)
chr3 (18-96)||(35483302-35483381)
chr3 (18-96)||(49146117-49146196)
chr3 (20-101)||(54983683-54983765)
chr3 (37-96)||(335013-335073)
chr3 (19-101)||(41767746-41767829)
chr3 (18-91)||(32508782-32508856)
chr3 (37-101)||(13539942-13540007)
chr3 (37-101)||(14417920-14417985)
chr3 (19-90)||(43774219-43774291)
chr3 (19-90)||(46328913-46328985)
chr3 (18-81)||(28206536-28206599)
chr3 (19-81)||(24537861-24537923)
chr3 (37-90)||(33206809-33206863)
chr3 (18-90)||(43566785-43566858)
chr3 (18-101)||(2564954-2565038)
chr3 (37-81)||(2732715-2732759)
chr3 (48-91)||(20623765-20623809)
chr3 (18-101)||(36331704-36331788)
chr3 (49-96)||(37279691-37279739)
chr3 (37-96)||(48173338-48173398)
chr3 (18-81)||(362976-363039)
chr3 (18-96)||(13874817-13874896)
chr3 (49-95)||(16006490-16006537)
chr3 (18-81)||(27066643-27066706)
chr3 (48-90)||(34344767-34344810)
chr3 (18-96)||(35140752-35140831)
chr3 (20-82)||(50381749-50381810)
chr3 (50-95)||(53472690-53472736)
chr3 (18-90)||(13616063-13616136)
chr3 (48-81)||(35477794-35477827)
chr3 (49-101)||(39492885-39492938)
chr3 (18-90)||(44953150-44953223)
chr3 (48-81)||(45713543-45713576)
chr3 (37-96)||(3955360-3955420)
chr3 (18-82)||(17439963-17440027)
chr3 (37-81)||(30157054-30157098)
chr3 (48-91)||(36727451-36727495)
chr3 (37-81)||(50144605-50144649)
[»] chr7 (33 HSPs)
chr7 (18-90)||(46716366-46716439)
chr7 (18-96)||(42887187-42887266)
chr7 (19-101)||(38451897-38451980)
chr7 (21-90)||(34948142-34948212)
chr7 (19-101)||(43635622-43635707)
chr7 (18-90)||(30644202-30644275)
chr7 (19-90)||(21285342-21285414)
chr7 (18-101)||(22965936-22966020)
chr7 (19-90)||(29658261-29658333)
chr7 (18-101)||(38778657-38778741)
chr7 (18-81)||(2261483-2261546)
chr7 (18-81)||(2366390-2366453)
chr7 (48-101)||(42286387-42286441)
chr7 (37-82)||(5228122-5228166)
chr7 (37-101)||(17997716-17997781)
chr7 (37-101)||(22047573-22047637)
chr7 (45-101)||(47403566-47403623)
chr7 (37-96)||(22741257-22741317)
chr7 (18-81)||(14102494-14102557)
chr7 (18-81)||(14412511-14412574)
chr7 (50-96)||(22660806-22660853)
chr7 (18-81)||(31694103-31694166)
chr7 (37-90)||(33202543-33202597)
chr7 (37-90)||(35890879-35890933)
chr7 (37-82)||(4590611-4590656)
chr7 (48-81)||(8214173-8214206)
chr7 (48-81)||(8724443-8724476)
chr7 (18-63)||(32814860-32814905)
chr7 (18-90)||(38792245-38792318)
chr7 (50-90)||(43902525-43902566)
chr7 (18-82)||(21086137-21086201)
chr7 (37-92)||(30152793-30152849)
chr7 (37-81)||(47552265-47552309)
[»] chr8 (33 HSPs)
chr8 (18-101)||(36359696-36359780)
chr8 (19-101)||(33570407-33570490)
chr8 (18-101)||(4798519-4798603)
chr8 (37-81)||(5184886-5184930)
chr8 (19-101)||(13537289-13537372)
chr8 (19-101)||(13626837-13626920)
chr8 (18-81)||(15042364-15042427)
chr8 (18-81)||(30942598-30942661)
chr8 (18-81)||(34073238-34073301)
chr8 (19-101)||(37154548-37154631)
chr8 (20-101)||(42762010-42762090)
chr8 (19-96)||(14012646-14012724)
chr8 (37-90)||(39258632-39258686)
chr8 (18-101)||(7540465-7540550)
chr8 (18-90)||(17987438-17987511)
chr8 (18-101)||(28378845-28378930)
chr8 (48-96)||(44070351-44070400)
chr8 (18-101)||(14683910-14683993)
chr8 (18-82)||(19957320-19957383)
chr8 (19-90)||(43468694-43468766)
chr8 (37-91)||(14010760-14010815)
chr8 (18-81)||(26703889-26703952)
chr8 (18-81)||(39484369-39484432)
chr8 (18-81)||(41125432-41125495)
chr8 (50-81)||(42688121-42688152)
chr8 (18-91)||(13702340-13702414)
chr8 (22-60)||(43846975-43847013)
chr8 (49-101)||(3379626-3379679)
chr8 (48-81)||(9737359-9737392)
chr8 (18-90)||(24074539-24074612)
chr8 (37-101)||(33524448-33524513)
chr8 (18-82)||(42761863-42761927)
chr8 (49-81)||(43874976-43875008)
[»] chr1 (33 HSPs)
chr1 (19-101)||(11405490-11405573)
chr1 (18-90)||(39433391-39433464)
chr1 (18-101)||(15774290-15774374)
chr1 (19-101)||(9527460-9527543)
chr1 (18-79)||(23930545-23930606)
chr1 (19-80)||(41008243-41008304)
chr1 (18-101)||(21884608-21884692)
chr1 (18-101)||(43555852-43555936)
chr1 (18-81)||(37733788-37733851)
chr1 (22-96)||(43837384-43837459)
chr1 (37-81)||(6014517-6014561)
chr1 (37-81)||(11213448-11213492)
chr1 (18-82)||(19424079-19424142)
chr1 (33-81)||(39434666-39434714)
chr1 (18-101)||(49916473-49916557)
chr1 (18-81)||(19793559-19793622)
chr1 (18-96)||(27745190-27745269)
chr1 (49-95)||(32711128-32711175)
chr1 (38-81)||(35593816-35593859)
chr1 (18-81)||(49251394-49251457)
chr1 (54-96)||(5680780-5680822)
chr1 (48-101)||(34560316-34560370)
chr1 (41-90)||(39994837-39994887)
chr1 (48-81)||(3532973-3533006)
chr1 (18-63)||(11238045-11238090)
chr1 (18-90)||(15368838-15368911)
chr1 (48-81)||(42832010-42832043)
chr1 (37-81)||(1031639-1031683)
chr1 (49-96)||(4616937-4616985)
chr1 (37-81)||(8865176-8865220)
chr1 (48-95)||(18923869-18923917)
chr1 (48-95)||(29331148-29331196)
chr1 (37-81)||(46116173-46116217)
[»] chr6 (30 HSPs)
chr6 (16-81)||(16251522-16251587)
chr6 (18-101)||(22389728-22389812)
chr6 (18-96)||(35190796-35190875)
chr6 (48-96)||(7563559-7563608)
chr6 (18-90)||(12089130-12089203)
chr6 (18-101)||(12127887-12127971)
chr6 (18-101)||(30566091-30566175)
chr6 (48-101)||(6530182-6530236)
chr6 (37-90)||(18904672-18904726)
chr6 (37-90)||(25020517-25020571)
chr6 (38-90)||(2053535-2053588)
chr6 (18-90)||(6270598-6270671)
chr6 (18-101)||(753290-753374)
chr6 (18-101)||(22983613-22983697)
chr6 (18-101)||(23804711-23804795)
chr6 (18-81)||(9438335-9438398)
chr6 (18-81)||(12101919-12101982)
chr6 (18-96)||(32057067-32057146)
chr6 (49-90)||(5134423-5134465)
chr6 (48-101)||(7709947-7710001)
chr6 (49-90)||(19165414-19165456)
chr6 (37-81)||(3448404-3448448)
chr6 (37-77)||(7720506-7720546)
chr6 (37-81)||(9491734-9491778)
chr6 (18-101)||(10377102-10377186)
chr6 (18-89)||(10424525-10424597)
chr6 (37-69)||(17305569-17305601)
chr6 (50-101)||(22501084-22501136)
chr6 (18-82)||(26528600-26528664)
chr6 (37-81)||(31761206-31761250)
[»] chr4 (47 HSPs)
chr4 (19-90)||(12820394-12820466)
chr4 (18-82)||(44074886-44074950)
chr4 (18-96)||(3465616-3465695)
chr4 (18-81)||(49280668-49280731)
chr4 (18-81)||(53697979-53698042)
chr4 (37-90)||(39992887-39992941)
chr4 (37-96)||(6330919-6330979)
chr4 (37-96)||(43327308-43327368)
chr4 (18-81)||(12856217-12856280)
chr4 (18-81)||(32885721-32885784)
chr4 (18-81)||(37032178-37032241)
chr4 (18-81)||(47017945-47018008)
chr4 (22-80)||(35747482-35747540)
chr4 (19-96)||(36008309-36008387)
chr4 (38-95)||(44374063-44374121)
chr4 (49-101)||(9285637-9285690)
chr4 (18-90)||(21476070-21476143)
chr4 (17-82)||(42411452-42411517)
chr4 (18-81)||(534763-534827)
chr4 (37-81)||(28221306-28221350)
chr4 (18-89)||(34773673-34773745)
chr4 (18-82)||(43115301-43115365)
chr4 (48-95)||(48512262-48512310)
chr4 (18-96)||(51077900-51077980)
chr4 (18-81)||(1297886-1297949)
chr4 (18-81)||(31601839-31601902)
chr4 (19-90)||(33359851-33359925)
chr4 (18-73)||(45350309-45350364)
chr4 (18-73)||(45359788-45359843)
chr4 (37-90)||(20753114-20753168)
chr4 (49-82)||(548885-548918)
chr4 (48-81)||(30152177-30152210)
chr4 (38-90)||(31578070-31578123)
chr4 (18-90)||(55656097-55656170)
chr4 (49-81)||(3442907-3442939)
chr4 (18-82)||(9924889-9924953)
chr4 (18-101)||(10098158-10098242)
chr4 (37-81)||(10757774-10757818)
chr4 (37-81)||(10970945-10970989)
chr4 (37-81)||(11039935-11039979)
chr4 (49-81)||(34684632-34684664)
chr4 (37-81)||(36576316-36576360)
chr4 (49-81)||(38433375-38433407)
chr4 (18-82)||(38690699-38690762)
chr4 (18-90)||(41492486-41492560)
chr4 (18-82)||(49089275-49089339)
chr4 (41-81)||(53291498-53291538)
[»] chr2 (26 HSPs)
chr2 (19-90)||(11133110-11133182)
chr2 (38-96)||(16973961-16974020)
chr2 (19-101)||(29664637-29664720)
chr2 (18-90)||(3179357-3179430)
chr2 (18-89)||(30474185-30474257)
chr2 (18-81)||(9796930-9796993)
chr2 (19-81)||(3037621-3037683)
chr2 (37-90)||(8234781-8234835)
chr2 (18-95)||(10262772-10262850)
chr2 (18-90)||(580772-580845)
chr2 (18-90)||(17154682-17154755)
chr2 (18-90)||(22538572-22538645)
chr2 (18-90)||(32891314-32891387)
chr2 (18-90)||(44721693-44721766)
chr2 (18-101)||(9547105-9547189)
chr2 (18-81)||(19905654-19905717)
chr2 (20-82)||(23405234-23405297)
chr2 (18-90)||(32891632-32891705)
chr2 (48-81)||(34018069-34018102)
chr2 (37-82)||(37886224-37886268)
chr2 (17-101)||(45523697-45523782)
chr2 (18-89)||(2114425-2114497)
chr2 (37-81)||(9791894-9791938)
chr2 (37-96)||(31564141-31564201)
chr2 (41-81)||(33001552-33001592)
chr2 (30-82)||(37592221-37592272)
[»] chr5 (33 HSPs)
chr5 (37-90)||(18202082-18202136)
chr5 (37-90)||(19058993-19059047)
chr5 (37-82)||(10508632-10508677)
chr5 (37-81)||(18478055-18478099)
chr5 (37-81)||(20762333-20762377)
chr5 (18-101)||(23925576-23925660)
chr5 (18-101)||(29106016-29106100)
chr5 (19-101)||(5156931-5157014)
chr5 (37-90)||(29096297-29096351)
chr5 (18-90)||(1244716-1244789)
chr5 (18-90)||(2029117-2029190)
chr5 (18-90)||(20945880-20945953)
chr5 (18-90)||(32158403-32158476)
chr5 (18-90)||(42455383-42455456)
chr5 (37-81)||(8015887-8015931)
chr5 (37-96)||(21212946-21213006)
chr5 (37-81)||(38618680-38618724)
chr5 (18-81)||(13754039-13754102)
chr5 (18-81)||(33729811-33729874)
chr5 (18-81)||(36888092-36888155)
chr5 (46-81)||(43404443-43404478)
chr5 (19-81)||(4216814-4216876)
chr5 (49-90)||(21360461-21360503)
chr5 (48-101)||(30403813-30403867)
chr5 (37-90)||(43166721-43166775)
chr5 (18-79)||(27440299-27440360)
chr5 (18-63)||(37303967-37304012)
chr5 (18-90)||(40339089-40339161)
chr5 (18-82)||(7645100-7645164)
chr5 (50-82)||(15978675-15978707)
chr5 (38-101)||(29629923-29629987)
chr5 (18-78)||(33800926-33800986)
chr5 (18-82)||(34729505-34729567)
[»] scaffold1086 (1 HSPs)
scaffold1086 (18-101)||(2521-2605)
[»] scaffold1990 (1 HSPs)
scaffold1990 (37-90)||(946-1000)
[»] scaffold0092 (1 HSPs)
scaffold0092 (37-90)||(47306-47360)
[»] scaffold0039 (1 HSPs)
scaffold0039 (18-101)||(101864-101948)
[»] scaffold0024 (1 HSPs)
scaffold0024 (39-83)||(133114-133158)
[»] scaffold0178 (1 HSPs)
scaffold0178 (18-81)||(4356-4419)
[»] scaffold0533 (1 HSPs)
scaffold0533 (18-90)||(9359-9432)
[»] scaffold0118 (1 HSPs)
scaffold0118 (33-70)||(37338-37375)
[»] scaffold0044 (1 HSPs)
scaffold0044 (37-101)||(49872-49937)
[»] scaffold0765 (1 HSPs)
scaffold0765 (37-81)||(796-840)


Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 201 - 447
Target Start/End: Complemental strand, 21420068 - 21419822
Alignment:
Q  201 ttttcaatgtcattaatgaaaaataattttatataatcattagtaatttctattttccattnnnnnnntaactaaagtttttattaaaacaagttataat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  21420068 ttttcaatgtcattaatgaaaaataattttatataatcattagtaatttctattttccattaaaaaaataactaaagtttttattaaaacaagttataat 21419969  T
Q  301 ttgaatggggaagtaagaaatgataattgatgaggaaattaccaagagcttgtcttttctgatatgagatagtgctataagagtaagatggaatcatctt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21419968 ttgaatggggaagtaagaaatgataattgatgaggaaattaccaagagcttgtcttttctgatatgagatagtgctataagagtaagatggaatcatctt 21419869  T
Q  401 tgtggtatcaatctcatcttcttcagagccagcatcatcagtctctg 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21419868 tgtggtatcaatctcatcttcttcagagccagcatcatcagtctctg 21419822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 21420251 - 21420168
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatttagccactaaactacgtgac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21420251 attatatgcagcggtcgaggttcgaatcctggacaccccacttatttaccttataaggtgaatttaaccactaaactacgtgac 21420168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 35483302 - 35483381
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||| |||||  |||||||||| |||||||||||||||| |||||||||||| |||| ||||||||| |||||    
T  35483302 attatatgcaggggtcggggttcgaatcccggacaccccacttattcaccttataaggtaaattctagccactagactac 35483381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 49146117 - 49146196
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||| |||||  ||||||| || |||||||||||||||| || |||||||||||||| |||||||||||||||    
T  49146117 attatatgcaggggtcggggttcgaaccccggacaccccacttattcactttataaggtgaattctagccactaaactac 49146196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 54983765 - 54983683
Alignment:
Q  20 tatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||| |||||  ||||||| || |||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||    
T  54983765 tatatgcaggggtcggggttcgaaccccggacaccccatttattcaccttataaggtgaattctagccactaaactacctgac 54983683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 335073 - 335013
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  335073 gttcgaaccctggacaccccacttattcaccttataaggtgaattctagctactaaactac 335013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 41767829 - 41767746
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||| ||||  ||||||||||  || ||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||    
T  41767829 ttatatgcaggggtcattgttcgaatctcgggcaccccacttattcaccttataaggtgaattatagccactaaattacctgac 41767746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 32508856 - 32508782
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaa 91  Q
    ||||||||||| |||||  ||||||| || | |||||||||||||| ||||||||||||||||| ||||||||||    
T  32508856 attatatgcaggggtcggggttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaa 32508782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 13540007 - 13539942
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||| || |||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  13540007 gttcgaaccccggacaccccacttatttaccttataaggtgaattctagccattagactacctgac 13539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 14417920 - 14417985
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||    
T  14417920 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagctacctgac 14417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 43774219 - 43774291
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||||| |||||  ||||||| ||  ||||||||||||||| ||||||||||||||||| |||||||||    
T  43774219 ttatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataaggtgaattctagccacta 43774291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 46328985 - 46328913
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||||| || ||  ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  46328985 ttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 46328913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 28206599 - 28206536
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||  |||||| ||| ||| |||||||| |||||||||| |||||||||||||||||    
T  28206599 attatatgcacgggtcgaggtttgaaccctggacatcccacttattcaccttataaggtgaatt 28206536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 24537861 - 24537923
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||| || ||  ||||||| || |||||||||||||||| |||||||||||||||||    
T  24537861 ttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaatt 24537923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 33206809 - 33206863
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  33206809 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 33206863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 43566858 - 43566785
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| |||||  ||||||| |   ||||||||||||||| ||||||||||||||||| |||||||||    
T  43566858 attatatgcaggggtcggggttcgaacctcagacaccccacttattcaccttataaggtgaattctagccacta 43566785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 2564954 - 2565038
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||  ||| |||| ||||||||||||||||||||| |||||| ||||||| |||||| ||| |||| ||||    
T  2564954 attatatgcaggggccgtggtttgaattctggacaccccacttatttactttataaagtgaattctagccattaagctacctgac 2565038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 2732715 - 2732759
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||||||||||| |||||||||||||||||    
T  2732715 gttcgaaccccggacaccccacttattcaccttataaggtgaatt 2732759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 20623809 - 20623765
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccactaa 91  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||    
T  20623809 ggacaccccacttattcaccttataaggtgaattctagccactaa 20623765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 36331788 - 36331704
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| |||||  ||||||| || |||||||||||||||| || ||| || ||||||| ||||||||| ||||| ||||    
T  36331788 attatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactagactacctgac 36331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 37279691 - 37279739
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||||    
T  37279691 gacaccccacttattcaccttataaggtgaattatagtcactaaactac 37279739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 48173338 - 48173398
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||| || ||||||| |||||||| ||||||||||||||||| |||||||||| ||||    
T  48173338 gttcgaaccccggacacctcacttattcaccttataaggtgaattctagccactaagctac 48173398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 362976 - 363039
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| |||||  ||||||| || ||| |||||||||||| || ||||||||||||||    
T  362976 attatatgcaggggtcggagttcgaaccccggataccccacttattcactttataaggtgaatt 363039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 13874896 - 13874817
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||| |||||  |||| |||||  |||| |||| ||||| ||||||||||||||||| ||||||||| |||||    
T  13874896 attatatgcaggggtcggggttcaaatcccagacatcccatttattcaccttataaggtgaattctagccactagactac 13874817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 16006537 - 16006490
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt-tagccactaaacta 95  Q
    ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  16006537 gacaccccacttattcaccttataaggtgaattctaaccactaaacta 16006490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 27066643 - 27066706
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| ||||   ||||||| || |||||||||||||||| ||||||| |||||||||    
T  27066643 attatatgcaggggtcagggttcgaaccccggacaccccacttattcaccttatgaggtgaatt 27066706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 34344810 - 34344767
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||||||||||| ||||||||||||||||| |||||||||    
T  34344810 ggacaccccacttattcaccttataaggtgaattctagccacta 34344767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 35140752 - 35140831
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||| || ||| || ||||||| |||||||||| ||||| |||||||||| | |||| ||||||||| |||||    
T  35140752 attatatgcagtggccgaggtgcgaatcccggacaccccaattattcaccttataagttaaattctagccactagactac 35140831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 50381749 - 50381810
Alignment:
Q  20 tatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||| |||||  |||||||||| |||||||||||||||| | ||| ||||||||||||    
T  50381749 tatatgcaggggtcggggttcgaatcccggacaccccacttattcatctt-taaggtgaattt 50381810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 53472690 - 53472736
Alignment:
Q  50 acaccccacttatttaccttataaggtgaatt-tagccactaaacta 95  Q
    |||||||||||||| || |||||||||||||| ||||||||||||||    
T  53472690 acaccccacttattcactttataaggtgaattctagccactaaacta 53472736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 13616136 - 13616063
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||| || |||||  ||||||| |  |||||||||||||||| | ||||||||||||||| |||||||||    
T  13616136 attatatgtaggggtcggagttcgaacctcggacaccccacttattcatcttataaggtgaattctagccacta 13616063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 35477794 - 35477827
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||||||||| |||||||||||||||||    
T  35477794 ggacaccccacttattcaccttataaggtgaatt 35477827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 39492885 - 39492938
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||||||||||| |||||||||||||| || ||||||| |||| ||||    
T  39492885 gacaccccacttatttacgttataaggtgaattctaaccactaagctacctgac 39492938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 44953223 - 44953150
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| ||| |||||||||| ||  |||||| || ||||| ||||||||| ||||||| |||||||||    
T  44953223 attatatgcaggggttgatgttcgaaccccagacacctcatttattcaccttataatgtgaattctagccacta 44953150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 45713543 - 45713576
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||||||||| |||||||||||||||||    
T  45713543 ggacaccccacttattcaccttataaggtgaatt 45713576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 3955360 - 3955420
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||| || |||||||||||||||| || ||| || ||||||| |||||||||||||||    
T  3955360 gttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactaaactac 3955420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 17440027 - 17439963
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| || || |||| ||| |  ||| |||||||||||| ||||||||||||||||||    
T  17440027 attatatgcaggggccggtgtttgaacctcggataccccacttattcaccttataaggtgaattt 17439963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 30157054 - 30157098
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||| ||||||| |||||||||||||||||    
T  30157054 gttcgaaccccggacacccaacttattcaccttataaggtgaatt 30157098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 36727495 - 36727451
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccactaa 91  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||    
T  36727495 ggacaccccacttattcatcttataaggtgaattctagccactaa 36727451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 50144649 - 50144605
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||| ||||||||| |||||||||||||||||    
T  50144649 gttcgaaccccggacactccacttattcaccttataaggtgaatt 50144605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 46716366 - 46716439
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| |||||  ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||    
T  46716366 attatatgcagaggtcggggttcgaaccctgaacaccccacttatttaccttataaggtgaattatagccacta 46716439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 42887187 - 42887266
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||| ||  || ||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  42887187 attatatgcaggggctgaggttcgaaccccggacaccccacttatttaccttataaggtgaattctagccactagactac 42887266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 38451897 - 38451980
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||| || ||  |||||||||| |||||||||||||||| || |||||||||||||| ||||||||| ||||| ||||    
T  38451897 ttatatgcaggggccggggttcgaatcccggacaccccacttattcacattataaggtgaattctagccactagactacctgac 38451980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 34948142 - 34948212
Alignment:
Q  21 atatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||| || ||| ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  34948142 atatgcagtggccgaggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 34948212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 43635622 - 43635707
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataa--ggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||||||||  ||||||| || |||||||||||||||| |||||| ||  |||||||| ||||||||||||||| ||||    
T  43635622 ttatatgcagcggtcggggttcgaaccccggacaccccacttattcaccttacaaagggtgaattctagccactaaactacttgac 43635707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 30644202 - 30644275
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || || |||||||| ||  ||||||||||||||| ||||||||||||||||| |||||||||    
T  30644202 attatatgcaggggccggtgttcgaaccccagacaccccacttattcaccttataaggtgaattctagccacta 30644275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 21285414 - 21285342
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||||| || ||  ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  21285414 ttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 21285342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 22966020 - 22965936
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||| ||||||| ||  ||||||||||||||| ||||||||||||||||| || |||||| ||||| ||||    
T  22966020 attatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccactagactacatgac 22965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 29658333 - 29658261
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||||| || ||  ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  29658333 ttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 29658261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 38778741 - 38778657
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaa-tttagccactaaactacgtgac 101  Q
    ||||||||||| || ||| |||| || || ||||| |||||||||||||||||||||||||| | ||||||| ||||||| ||||    
T  38778741 attatatgcaggggccgaggttctaaccccggacatcccacttatttaccttataaggtgaactctagccaccaaactacctgac 38778657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 2261546 - 2261483
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  |||||||||| |||||||| ||||||| |||||||||||||||||    
T  2261546 attatatgcaggggccggggttcgaatcccggacacccaacttattcaccttataaggtgaatt 2261483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 2366390 - 2366453
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| |||||  |||||||  || ||||||||||||||| |||||||||||||||||    
T  2366390 attatatgcaggggtcggggttcgaactctagacaccccacttattcaccttataaggtgaatt 2366453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 42286387 - 42286441
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||| ||||    
T  42286387 ggacaccccacttatttaccttataaggtgaattctaaccaataaactacctgac 42286441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 5228122 - 5228166
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  5228122 gttcgaatcctggacaccccacttattcacctt-taaggtgaattt 5228166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 17997781 - 17997716
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||| ||||||||||||| ||||| |||||| |||||||||| ||||||||| ||||| ||||    
T  17997781 gttcgaaccctggacaccccatttattcaccttaaaaggtgaattctagccactagactacttgac 17997716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 22047573 - 22047637
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||| |||||||||| |||| ||||    
T  22047573 gttcgaatc-tggacaccccacttattcaccttataagatgaattctagccactaagctacctgac 22047637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 47403623 - 47403566
Alignment:
Q  45 cctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||||| |||| ||||    
T  47403623 cctggacactccacttattcaccttataaggtgaattctagccactaagctacctgac 47403566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 22741257 - 22741317
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    |||||||||  |||||||||||||||| | ||||||||||||||| ||||||||| |||||    
T  22741257 gttcgaatctcggacaccccacttattcatcttataaggtgaattctagccactagactac 22741317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 14102494 - 14102557
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  ||| ||| || |||||||||||||||| |||||||||||||||||    
T  14102494 attatatgcaggggccggggtttgaaccccggacaccccacttattcaccttataaggtgaatt 14102557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 14412511 - 14412574
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  ||| ||| || |||||||||||||||| |||||||||||||||||    
T  14412511 attatatgcaggggccggggtttgaaccccggacaccccacttattcaccttataaggtgaatt 14412574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 22660806 - 22660853
Alignment:
Q  50 acaccccacttatttaccttataaggtgaa-tttagccactaaactac 96  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  22660806 acaccccacttatttaccttataaagtgaattttagccactacactac 22660853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 31694103 - 31694166
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || |||  ||||||  | ||||||||||||||||||| ||||||||||||||    
T  31694103 attatatgcaggggacgagattcgaactccggacaccccacttatttactttataaggtgaatt 31694166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 33202597 - 33202543
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||| || |||||||||||||||| | ||||||||||||||| |||||||||    
T  33202597 gttcgaaccccggacaccccacttattcatcttataaggtgaattctagccacta 33202543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 35890933 - 35890879
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||||| | |||||||||||||| | ||||||||||||||| |||||||||    
T  35890933 gttcgaatcccgaacaccccacttattcatcttataaggtgaattctagccacta 35890879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 4590656 - 4590611
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    |||||||||| ||||||| |||||||| | ||||||||||||||||    
T  4590656 gttcgaatcccggacaccacacttattcatcttataaggtgaattt 4590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 8214173 - 8214206
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||||||||| |||||||||||||||||    
T  8214173 ggacaccccacttattcaccttataaggtgaatt 8214206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 8724443 - 8724476
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||||||||| |||||||||||||||||    
T  8724443 ggacaccccacttattcaccttataaggtgaatt 8724476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 32814860 - 32814905
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatt 63  Q
    ||||||||||| |||||  |||||||||| ||||||||||||||||    
T  32814860 attatatgcaggggtcggagttcgaatcccggacaccccacttatt 32814905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 38792245 - 38792318
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| ||||   ||| ||| || |||||||| ||||||| ||||||||||||||||| |||||||||    
T  38792245 attatatgcaggggtcagagtttgaaccccggacaccctacttattcaccttataaggtgaattctagccacta 38792318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 43902566 - 43902525
Alignment:
Q  50 acaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  43902566 acaccccacttattcaccttataaggtgaattctagccacta 43902525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 21086137 - 21086201
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| | |||| |||||||  | |||||||| ||||||| |||||||||| |||||||    
T  21086137 attatatgcagggatcgaagttcgaactccggacacccaacttattcaccttataagatgaattt 21086201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 30152793 - 30152849
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaa 92  Q
    ||||||| || | |||||||||||||| |||||||||| |||||| |||||||||||    
T  30152793 gttcgaaccccgaacaccccacttattcaccttataagatgaattctagccactaaa 30152849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 47552265 - 47552309
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||| ||||||| |||||||||||||||||    
T  47552265 gttcgaaccccggacaccctacttattcaccttataaggtgaatt 47552309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 36359780 - 36359696
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||  |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||    
T  36359780 attatatgcaggggccggagttcgaatcccggacaccccacttattcaccttataaggtgaattctagccactagactacctgac 36359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 33570490 - 33570407
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||  |||||  ||||||| |  |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  33570490 ttatatgcatgggtcggggttcgaacctcggacaccccacttattcaccttataaggtgaattctagccactaaactacttgac 33570407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 4798603 - 4798519
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| ||||| ||||||||||| ||||||||| ||||| ||||    
T  4798603 attatatgcaggggccggggttcgaaccccggacaccccacttattcaccttgtaaggtgaattctagccactagactacctgac 4798519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 5184930 - 5184886
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  5184930 gttcgaaccctggacaccccacttattcaccttataaggtgaatt 5184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 13537372 - 13537289
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||  ||||  ||||||| ||  ||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||    
T  13537372 ttatatgcaggtgtcggggttcgaaccccagacaccccacttattcatcttataaggtgaattgtagccactaaactacttgac 13537289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 13626920 - 13626837
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||  ||||  ||||||| ||  ||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||    
T  13626920 ttatatgcaggtgtcggggttcgaaccccagacaccccacttattcatcttataaggtgaattgtagccactaaactacttgac 13626837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 15042427 - 15042364
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| |||||||||||||||||    
T  15042427 attatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaatt 15042364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 30942661 - 30942598
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  ||||||| || | ||||||||||||||||||||||||||||||||    
T  30942661 attatatgcaggggccggggttcgaaccccgaacaccccacttatttaccttataaggtgaatt 30942598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 34073301 - 34073238
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||| || |||| | ||||||| || |||||||||||||||| |||||||||||||||||    
T  34073301 attatatgtaggggtcaaggttcgaaccccggacaccccacttattcaccttataaggtgaatt 34073238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 37154548 - 37154631
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||| |||||   |||||| ||||||||||||| ||||| ||||||||||||||||| ||| ||||| ||||| ||||    
T  37154548 ttatatgcaggggtcggaattcgaaccctggacaccccatttattcaccttataaggtgaattctaggcactagactacctgac 37154631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 42762090 - 42762010
Alignment:
Q  20 tatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||| |||||| |||| ||||| |||||||||||||||| ||||  ||||||||||| ||||||||| ||||| ||||    
T  42762090 tatatgcaggggtcgaggttcaaatcccggacaccccacttattcacct--taaggtgaattctagccactagactacctgac 42762010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 14012646 - 14012724
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaa-tttagccactaaactac 96  Q
    |||||||||| || ||  |||||||  | |||||||||||||||| || |||||||||||| |||||||||||||||||    
T  14012646 ttatatgcaggggccggggttcgaagtccggacaccccacttattcacattataaggtgaattttagccactaaactac 14012724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 39258632 - 39258686
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||||||||||||||||||| | |||||||||| |||| |||||||||    
T  39258632 gttcgaatcctggacaccccacttattcatcttataaggtaaattctagccacta 39258686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 7540550 - 7540465
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataa-ggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| |||||  |||| || |||||||| |||||||||| ||||||||| |||||||| ||||||||| ||||| ||||    
T  7540550 attatatgcaggggtcggggttctaaccctggacaacccacttattcaccttataagggtgaattatagccactagactacctgac 7540465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 17987511 - 17987438
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  ||||||| || |||||||||| ||||| ||||||||||||||||| |||||||||    
T  17987511 attatatgcaggggccggagttcgaaccccggacaccccaattattcaccttataaggtgaattatagccacta 17987438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 28378845 - 28378930
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacacccc-acttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| ||  || ||||||| || ||||||||| ||||||| ||||||||||||||||| || |||||||||||| ||||    
T  28378845 attatatgcaggggctgaggttcgaaccccggacacccccacttattcaccttataaggtgaattctaaccactaaactacctgac 28378930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 44070400 - 44070351
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  44070400 ggacaccctacttattcaccttataaggtgaattctagccactaaactac 44070351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 14683910 - 14683993
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| |||||  ||||||| || ||||| |||||||||| ||||||||||||||||| ||| ||||| ||||| ||||    
T  14683910 attatatgcag-ggtcggggttcgaaccccggacatcccacttattcaccttataaggtgaattctagtcactagactacctgac 14683993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 19957383 - 19957320
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| || ||| ||||||| || |||||||||||||||| ||||| ||||||||||||    
T  19957383 attatatgcaggggacgaggttcgaaccccggacaccccacttattcacctt-taaggtgaattt 19957320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 43468766 - 43468694
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||| || |||||  |||||||  | |||||||||||||||| ||||||||||||||||| |||||||||    
T  43468766 ttatatgtaggggtcggggttcgaactccggacaccccacttattcaccttataaggtgaattctagccacta 43468694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 14010815 - 14010760
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaa 91  Q
    ||||||| || |||||||||||||||| |||||||||||| |||| ||||||||||    
T  14010815 gttcgaaccccggacaccccacttattcaccttataaggtaaattctagccactaa 14010760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 26703952 - 26703889
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||  |||||  |||||||||| | ||||| |||||||| |||||||||||||||||    
T  26703952 attatatgcaagggtcggggttcgaatcccgaacacctcacttattcaccttataaggtgaatt 26703889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 39484432 - 39484369
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  |||||||| | |||||||||||||||| | |||||||||||||||    
T  39484432 attatatgcaggggccggggttcgaatgccggacaccccacttattcatcttataaggtgaatt 39484369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 41125495 - 41125432
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||| || |||||| |||||||  | ||||| |||||||||| |||||||||||||||||    
T  41125495 attatatgtaggggtcgaagttcgaagtccggacatcccacttattcaccttataaggtgaatt 41125432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 81
Target Start/End: Original strand, 42688121 - 42688152
Alignment:
Q  50 acaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||||||||||||||||||||||||    
T  42688121 acaccccacttatttaccttataaggtgaatt 42688152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 13702414 - 13702340
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaa 91  Q
    ||||||||||| |||||  ||||||| |   |||||| |||||||| ||||||||||||||||| ||||||||||    
T  13702414 attatatgcaggggtcggggttcgaacctcagacacctcacttattcaccttataaggtgaattctagccactaa 13702340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 43846975 - 43847013
Alignment:
Q  22 tatgcagcggtcgatgttcgaatcctggacaccccactt 60  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  43846975 tatgcaggggtcgatgttcgaaccctggacaccccactt 43847013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 3379679 - 3379626
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||| |||| ||||    
T  3379679 gacaccccacttattcaccttataaggtgaattctagccattaagctacctgac 3379626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 9737392 - 9737359
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||||||||||| ||||||||||||||    
T  9737392 ggacaccccacttatttactttataaggtgaatt 9737359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 24074539 - 24074612
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||| || ||| || ||||||| |  ||||||| |||||||| ||||||||||||||||| |||||||||    
T  24074539 attatatgtaggggttgaagttcgaacctcggacacctcacttattcaccttataaggtgaattctagccacta 24074612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 33524448 - 33524513
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaa-tttagccactaaactacgtgac 101  Q
    ||||||| || |||||||||||||||| ||  |||||||| || ||||||||||||||||| ||||    
T  33524448 gttcgaaccccggacaccccacttattcactctataaggttaattttagccactaaactacctgac 33524513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 42761927 - 42761863
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| || ||  |||||||  |||||||| ||||||||| || |||||||||||||||    
T  42761927 attatatgcagggggcggggttcgaactctggacactccacttattcactttataaggtgaattt 42761863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 43875008 - 43874976
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||||||| |||||||||||||||||    
T  43875008 gacaccccacttattcaccttataaggtgaatt 43874976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 11405490 - 11405573
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||| |||||  ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||    
T  11405490 ttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagctacctgac 11405573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 39433391 - 39433464
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||||||||||| |  |||||||||||||||| ||||||||||||||||| |||||||||    
T  39433391 attatatgcaggggccgatgttcgaacctcggacaccccacttattcaccttataaggtgaattctagccacta 39433464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 15774374 - 15774290
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||| || |||||  ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||    
T  15774374 attatatgtaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagctacctgac 15774290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 9527460 - 9527543
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||| |||||  ||| ||| ||||||||||||||||||| | ||||||||||||||| ||||||||| ||||| ||||    
T  9527460 ttatatgcaggggtcggggtttgaaccctggacaccccacttattcatcttataaggtgaattctagccactagactacctgac 9527543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 23930606 - 23930545
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaa 79  Q
    ||||||||||| |||||  ||||||| ||||||||||||| ||||||||||||||| |||||    
T  23930606 attatatgcaggggtcggggttcgaaccctggacaccccatttatttaccttataaagtgaa 23930545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 41008243 - 41008304
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaat 80  Q
    |||||||||  |||| |||||||||||||| |||||||||||||| ||||||||| ||||||    
T  41008243 ttatatgcaagggtctatgttcgaatcctgaacaccccacttattcaccttataatgtgaat 41008304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 21884608 - 21884692
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||| ||||||| ||  ||||||||||||||| ||||||||||||||||| || |||||| ||||| ||||    
T  21884608 attatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccactagactacatgac 21884692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 43555936 - 43555852
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| | |||  |||| || || |||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||||    
T  43555936 attatatgcagggatcggggttcaaacccaggacaccccacttatttaccttataaggtggattctagccactagactacctgac 43555852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 37733788 - 37733851
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| |||||||||||||||||    
T  37733788 attatatgcagtggacggggttcgaaccccggacaccccacttattcaccttataaggtgaatt 37733851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 43837459 - 43837384
Alignment:
Q  22 tatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||| |||||  ||||||| ||||||||||||| ||||| |||||||| |||||||| |||||| ||||||||    
T  43837459 tatgcaggggtcggggttcgaaccctggacaccccatttattcaccttatacggtgaattatagccattaaactac 43837384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 6014561 - 6014517
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||| | |||||||||||||||| |||||||||||||||||    
T  6014561 gttcgaattccggacaccccacttattcaccttataaggtgaatt 6014517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 11213492 - 11213448
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || ||||||||||||||||||| ||||||||||||||    
T  11213492 gttcgaaccccggacaccccacttatttactttataaggtgaatt 11213448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 19424079 - 19424142
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| |||||  ||||||| || |||||||||||||||| ||||| ||||||||||||    
T  19424079 attatatgcaggggtcggggttcgaaccccggacaccccacttattcacctt-taaggtgaattt 19424142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 39434666 - 39434714
Alignment:
Q  33 cgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| |  |||||||||||||||| |||||||||||||||||    
T  39434666 cgatgttcgaacctcggacaccccacttattcaccttataaggtgaatt 39434714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 49916473 - 49916557
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||| || |||||  |||||||||| ||||| |||| ||||| |  |||||||||||||| ||||||||||||||| ||||    
T  49916473 attatatgtaggggtcggggttcgaatcccggacatcccatttattcatattataaggtgaattctagccactaaactacctgac 49916557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 19793559 - 19793622
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||   |||||| || |||||||||||||||| |||||||||||||||||    
T  19793559 attatatgcaggggccggaattcgaaccccggacaccccacttattcaccttataaggtgaatt 19793622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 27745190 - 27745269
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||| | |||  ||||||| || |||||||||| ||||| ||||||||| |||| || |||||||||||||||    
T  27745190 attatatgcagggatcggggttcgaaccccggacaccccatttattcaccttataaagtgagttctagccactaaactac 27745269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 32711175 - 32711128
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt-tagccactaaacta 95  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  32711175 gacaccccacttattcaccttataaggtgaattctagccactagacta 32711128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 35593816 - 35593859
Alignment:
Q  38 ttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||| || |||||||||||||||| |||||||||||||||||    
T  35593816 ttcgaaccccggacaccccacttattcaccttataaggtgaatt 35593859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 49251457 - 49251394
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| |||||  ||||||| ||  ||||||||||||||| ||||||||| |||||||    
T  49251457 attatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataatgtgaatt 49251394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 5680780 - 5680822
Alignment:
Q  54 cccacttatttaccttataaggtgaatttagccactaaactac 96  Q
    ||||||||||||| ||||||||||| | |||||||||||||||    
T  5680780 cccacttatttacattataaggtgattctagccactaaactac 5680822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 34560370 - 34560316
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||| ||||| ||||    
T  34560370 ggacaccccacttattcaccttataaggtgaattctagtcactagactacctgac 34560316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 39994887 - 39994837
Alignment:
Q  41 gaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||| ||||| |||||||||| ||||||||||||||||| |||||||||    
T  39994887 gaatcccggacatcccacttattcaccttataaggtgaattctagccacta 39994837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 3533006 - 3532973
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||||||||| |||||||||||||||||    
T  3533006 ggacaccccacttattcaccttataaggtgaatt 3532973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 11238090 - 11238045
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatt 63  Q
    ||||||||||| |||||  |||||||||| ||||||||||||||||    
T  11238090 attatatgcaggggtcggggttcgaatcccggacaccccacttatt 11238045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 15368838 - 15368911
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| |  |||||||||||||| |||||||||    
T  15368838 attatatgcaggggccggggttcgaaccccggacaccccacttattcattttataaggtgaattctagccacta 15368911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 42832010 - 42832043
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||||||||| |||||||||||||||||    
T  42832010 ggacaccccacttattcaccttataaggtgaatt 42832043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 1031639 - 1031683
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || | |||||||||||||| |||||||||||||||||    
T  1031639 gttcgaaccccgaacaccccacttattcaccttataaggtgaatt 1031683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 4616937 - 4616985
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||| |||||    
T  4616937 gacaccccacttattcaccttataaagtgaattctagccactagactac 4616985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 8865220 - 8865176
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || | |||||||||||||||| |||||||||||||||    
T  8865220 gttcgaacccagaacaccccacttatttatcttataaggtgaatt 8865176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 18923917 - 18923869
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccactaaacta 95  Q
    ||||||||||| |||| ||||||||||||||||| |||||| |||||||    
T  18923917 ggacaccccacgtattcaccttataaggtgaattctagccattaaacta 18923869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 29331196 - 29331148
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccactaaacta 95  Q
    |||||||| | |||||||| |||||||||||||| ||||||||||||||    
T  29331196 ggacaccctatttatttacattataaggtgaattctagccactaaacta 29331148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 46116217 - 46116173
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||||| ||||| |||||||||||||||||    
T  46116217 gttcgaaccccggacaccccaattattcaccttataaggtgaatt 46116173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 16251587 - 16251522
Alignment:
Q  16 caattatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||||| ||||| ||||||||  | |||||||||||||||| |||||||||||||||||    
T  16251587 caattatatgcaggggtcgttgttcgaactccggacaccccacttattcaccttataaggtgaatt 16251522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 22389812 - 22389728
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| ||||   |||||||||| |||||||||||||||| ||||||||||||||||| ||||| ||| ||||| ||||    
T  22389812 attatatgcaggggtcagggttcgaatcccggacaccccacttattcaccttataaggtgaattctagccgctagactacctgac 22389728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 35190796 - 35190875
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||| |||||  ||||||| || | |||||||||||||| ||||||||||||||||| ||||||||| |||||    
T  35190796 attatatgcaggggtcggagttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactagactac 35190875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 7563608 - 7563559
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaa-tttagccactaaactac 96  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  7563608 ggacaccccacttattcaccttataaggtgaattttagccactaaactac 7563559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 12089130 - 12089203
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  12089130 attatatgcaggggccggagttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 12089203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 12127971 - 12127887
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| |||||   |||||| || |||||| ||||||||| ||||||||||||||||| ||||||||| ||||| ||||    
T  12127971 attatatgcaggggtcggaattcgaaccccggacacgccacttattcaccttataaggtgaattctagccactagactacctgac 12127887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 30566091 - 30566175
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| ||| || ||| ||| || |||||||||||||||| |||||||||||||||||  |||||||| ||||| ||||    
T  30566091 attatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaattccagccactagactacctgac 30566175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 6530236 - 6530182
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||    
T  6530236 ggacaccccacttattcaccttataaggtgaattctagccactagactacttgac 6530182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 18904726 - 18904672
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||  |||||||||||||||||| ||||||||||||||||| |||||||||    
T  18904726 gttcgaactctggacaccccacttattcaccttataaggtgaattctagccacta 18904672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 25020571 - 25020517
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  25020571 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 25020517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 2053535 - 2053588
Alignment:
Q  38 ttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||  |||||||| ||||||||||||||||||||||||| |||||||||    
T  2053535 ttcgaatctcggacaccctacttatttaccttataaggtgaattctagccacta 2053588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 6270671 - 6270598
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  ||||||| |||| |||||||| ||||| ||||||||||||||||| |||||||||    
T  6270671 attatatgcaggggccggggttcgaaccctgaacaccccaattattcaccttataaggtgaattctagccacta 6270598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 753374 - 753290
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||| || |||||  ||||||| |||||||||||||||||||  ||||||||| |||||| |||| |||| ||||| ||||    
T  753374 attatatgtaggggtcggggttcgaaccctggacaccccacttattccccttataagatgaattctagctactagactacctgac 753290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 22983613 - 22983697
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| | ||||||||||||||| || ||||||  |||||||||    
T  22983613 attatatgcaggggccggggttcgaaccccggacaccccacttattcatcttataaggtgaattctaaccactatgctacgtgac 22983697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 23804795 - 23804711
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| | ||||||||||||||| || ||||||  |||||||||    
T  23804795 attatatgcaggggccggggttcgaaccccggacaccccacttattcatcttataaggtgaattctaaccactatgctacgtgac 23804711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 9438335 - 9438398
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| ||| |  ||||||| || |||||||||||| ||| |||||||||||||||||    
T  9438335 attatatgcaggggttggggttcgaaccccggacaccccactcattcaccttataaggtgaatt 9438398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 12101919 - 12101982
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  ||||||| || |||||||| ||||||| |||||||||||||||||    
T  12101919 attatatgcaggggccggcgttcgaaccccggacaccctacttattcaccttataaggtgaatt 12101982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 32057067 - 32057146
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||| |||||| ||||||| ||  || | |||||||||| | ||||||||||||||| || ||||||||||||    
T  32057067 attatatgcagtggtcgaggttcgaaccccagagatcccacttattcatcttataaggtgaattctaaccactaaactac 32057146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 5134465 - 5134423
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  5134465 gacaccccacttattcaccttataaggtgaattctagccacta 5134423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 7709947 - 7710001
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||| |||||||||| ||||||||||||||||| || |||||||||||| ||||    
T  7709947 ggacatcccacttattcaccttataaggtgaattctatccactaaactacatgac 7710001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 19165414 - 19165456
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  19165414 gacaccccacttattcaccttataaggtgaattctagccacta 19165456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 3448404 - 3448448
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||||||||||| | |||||||||||||||    
T  3448404 gttcgaaccccggacaccccacttattcatcttataaggtgaatt 3448448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 7720546 - 7720506
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtg 77  Q
    ||||||| || |||||||||||||||| |||||||||||||    
T  7720546 gttcgaaccccggacaccccacttattcaccttataaggtg 7720506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 9491778 - 9491734
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||||||||||| |||||||||| ||||||    
T  9491778 gttcgaaccccggacaccccacttattcaccttataagatgaatt 9491734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 10377186 - 10377102
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||  ||||||| || | |||||||||||||| || ||||||| |||||| ||||||||| ||||| ||||    
T  10377186 attatatgcagaggccggggttcgaaccccgaacaccccacttattcacgttataagatgaattctagccactagactacctgac 10377102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 10424597 - 10424525
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccact 89  Q
    |||||||| || |||||  ||| |||||| |||||||||||||||| ||||||||| || |||| ||||||||    
T  10424597 attatatgtaggggtcgtggtttgaatcccggacaccccacttattcaccttataaagtaaattctagccact 10424525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 17305569 - 17305601
Alignment:
Q  37 gttcgaatcctggacaccccacttatttacctt 69  Q
    ||||||||||||||||||||||||||| |||||    
T  17305569 gttcgaatcctggacaccccacttattcacctt 17305601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 22501084 - 22501136
Alignment:
Q  50 acaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||||||| ||||| ||||||||||| ||||||||| ||||| ||||    
T  22501084 acaccccacttattcaccttgtaaggtgaattctagccactagactacctgac 22501136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 26528600 - 26528664
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| |||||  |||| || |  |||||||||||||||| |||||||||||| |||||    
T  26528600 attatatgcaggggtcggggttcaaacctcggacaccccacttattcaccttataaggtaaattt 26528664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 31761206 - 31761250
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||  ||||||| ||||||| |||||||||||||||||    
T  31761206 gttcgaatcccagacaccctacttattcaccttataaggtgaatt 31761250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 12820466 - 12820394
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||||| |||||  ||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||||    
T  12820466 ttatatgcaggggtcggggttagaaccctggacaccccacttattcaccttataaggtgaattctagccacta 12820394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 44074886 - 44074950
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| | | || |||||||||| |||||||||||||||| ||||||||||||||||||    
T  44074886 attatatgcagggattgaagttcgaatcccggacaccccacttattcaccttataaggtgaattt 44074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 3465616 - 3465695
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| ||||||||||||||||| ||||||||| |||||    
T  3465616 attatatgcaggggccggagttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactagactac 3465695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 49280731 - 49280668
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| ||||| |||| ||| |||||||||| |||||||| |||||||||||||||||    
T  49280731 attatatgcaggggtcggtgtttgaaccctggacacctcacttattcaccttataaggtgaatt 49280668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 53698042 - 53697979
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  ||||||| || ||||||||||||||||||||||||||||||||||    
T  53698042 attatatgcaggggccggggttcgaaccccggacaccccacttatttaccttataaggtgaatt 53697979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 39992887 - 39992941
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  39992887 gttcgaattctggacaccccacttattcaccttataaggtgaattctagccacta 39992941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 6330979 - 6330919
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaa-tttagccactaaactac 96  Q
    |||| ||||| |||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  6330979 gttcaaatcccggacaccccacttattcaccttataaggtgaattttagccactaatctac 6330919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 43327368 - 43327308
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaa-tttagccactaaactac 96  Q
    ||||||| || | |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  43327368 gttcgaaccccgcacaccccacttatttaccttataaagtgaattttagccactaaactac 43327308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 12856217 - 12856280
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||| || |||||  ||||||| || |||||||||||||||| |||||||||||||||||    
T  12856217 attatatgaaggggtcggagttcgaaccccggacaccccacttattcaccttataaggtgaatt 12856280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 32885721 - 32885784
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| |||||  ||||||| |  |||||||||||||||| |||||||||||||||||    
T  32885721 attatatgcaggggtcggagttcgaacctcggacaccccacttattcaccttataaggtgaatt 32885784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 37032241 - 37032178
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| |||||   |||||| || |||||||||||||||| |||||||||||||||||    
T  37032241 attatatgcaggggtcgggattcgaaccccggacaccccacttattcaccttataaggtgaatt 37032178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 47018008 - 47017945
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| |||||||||||||||||    
T  47018008 attatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaatt 47017945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 35747540 - 35747482
Alignment:
Q  22 tatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaat 80  Q
    ||||||| |||||| |||||||  | |||||||||||||||| ||||||||||||||||    
T  35747540 tatgcaggggtcgaggttcgaactccggacaccccacttattcaccttataaggtgaat 35747482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 36008309 - 36008387
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    |||||||||| || ||  ||||||| || | |||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  36008309 ttatatgcaggggccggggttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaagctac 36008387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 44374121 - 44374063
Alignment:
Q  38 ttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaacta 95  Q
    ||||||||  |||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  44374121 ttcgaatctcggacaccccacttatttatcttataaggtgaattctagtcactaaacta 44374063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 9285690 - 9285637
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||    
T  9285690 gacaccccacttattaaccttataaggtgaattctagccactagactacttgac 9285637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 21476143 - 21476070
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| ||||||||||||||  | ||||| |||||||||| | ||||||| ||||||| |||||||||    
T  21476143 attatatgcaggggtcgatgttcgaactccggacatcccacttattcatcttataaagtgaattctagccacta 21476070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 42411517 - 42411452
Alignment:
Q  17 aattatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    |||||||||||| |||||  ||||||| || ||||||||||||||||||| ||| || ||||||||    
T  42411517 aattatatgcaggggtcggggttcgaaccccggacaccccacttatttactttaaaaagtgaattt 42411452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 534827 - 534763
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacacccc-acttatttaccttataaggtgaatt 81  Q
    ||||||||||| |||||  ||| |||||| ||||||||| ||||||| |||||||||||||||||    
T  534827 attatatgcaggggtcggggtttgaatcccggacacccccacttattcaccttataaggtgaatt 534763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 28221350 - 28221306
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||||||||||| |||||||||||||||||    
T  28221350 gttcgaaccccggacaccccacttattcaccttataaggtgaatt 28221306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 34773745 - 34773673
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccact 89  Q
    ||||||||||| ||  || ||||||| || |||||||||||||||| || |||||||||||||| ||||||||    
T  34773745 attatatgcaggggctgaggttcgaaccccggacaccccacttattcactttataaggtgaattctagccact 34773673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 43115301 - 43115365
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| ||||||  |||||| || |||||||||| ||||| ||||||||| ||||||||    
T  43115301 attatatgcaggggtcgagattcgaaccccggacaccccatttattcaccttataaagtgaattt 43115365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 48512262 - 48512310
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaa-tttagccactaaacta 95  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  48512262 ggacaccccacttattcaccttataaggtgaattttagccactagacta 48512310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 51077900 - 51077980
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataa-ggtgaatt-tagccactaaactac 96  Q
    ||||||||||| |||||  |||||||||  | |||||||||||||| ||||||||| |||||||| ||||||||| |||||    
T  51077900 attatatgcaggggtcggagttcgaatctcgaacaccccacttattcaccttataagggtgaattctagccactagactac 51077980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 1297886 - 1297949
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| |||||   |||||| |||| |||| ||||||||| |||||||||||||||||    
T  1297886 attatatgcaggggtcgggattcgaaccctgaacactccacttattcaccttataaggtgaatt 1297949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 31601839 - 31601902
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || |||  |||||| || |||||||||||||||| |||||||||| ||||||    
T  31601839 attatatgcaggggccgagattcgaaccccggacaccccacttattcaccttataagatgaatt 31601902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 33359851 - 33359925
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttacctt--ataaggtgaatt-tagccacta 90  Q
    |||||||||  |||||| ||||||| ||||||||||||||||||| |||||  | |||||||||| |||||||||    
T  33359851 ttatatgcaagggtcgaggttcgaaccctggacaccccacttattcaccttgaaaaaggtgaattctagccacta 33359925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 45350309 - 45350364
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataa 73  Q
    ||||||||||| |||||  ||||||| || |||||||||||||||| |||||||||    
T  45350309 attatatgcagaggtcggagttcgaaccccggacaccccacttattcaccttataa 45350364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 45359788 - 45359843
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataa 73  Q
    ||||||||||| |||||  ||||||| || |||||||||||||||| |||||||||    
T  45359788 attatatgcagaggtcggagttcgaaccccggacaccccacttattcaccttataa 45359843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 20753168 - 20753114
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||| || ||||||| |||||||| ||||||||||||||||| |||||||||    
T  20753168 gttcgaaccccggacaccacacttattcaccttataaggtgaattctagccacta 20753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 548918 - 548885
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||||||| ||||||||||||||||||    
T  548918 gacaccccacttattcaccttataaggtgaattt 548885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 30152177 - 30152210
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||||||||| |||||||||||||||||    
T  30152177 ggacaccccacttattcaccttataaggtgaatt 30152210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 31578070 - 31578123
Alignment:
Q  38 ttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||| || |||||||||||||||| || |||||||||||||| |||||||||    
T  31578070 ttcgaaacccggacaccccacttattcacattataaggtgaattctagccacta 31578123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 55656170 - 55656097
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  |||| ||||| |||||||| ||||||| |||||||||| |||||| |||||||||    
T  55656170 attatatgcaggggccggagttcaaatcccggacaccctacttattcaccttataagatgaattctagccacta 55656097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 3442907 - 3442939
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||||||| |||||||||||||||||    
T  3442907 gacaccccacttattcaccttataaggtgaatt 3442939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 9924889 - 9924953
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| |||||  ||||||| || |||||| ||||||||| ||||| || |||||||||    
T  9924889 attatatgcaggggtcggggttcgaaccccggacactccacttattcaccttgtatggtgaattt 9924953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 10098158 - 10098242
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||   |||||| || |||||||||||||||| | |||||||| |||||| ||||||||| ||||| ||||    
T  10098158 attatatgcaggggccgggattcgaaccccggacaccccacttattcatcttataagatgaattctagccactagactacctgac 10098242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 10757818 - 10757774
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||||||||||| |||||||||||| ||||    
T  10757818 gttcgaaccccggacaccccacttattcaccttataaggtaaatt 10757774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 10970989 - 10970945
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||||||||||| |||||||||||| ||||    
T  10970989 gttcgaaccccggacaccccacttattcaccttataaggtaaatt 10970945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 11039979 - 11039935
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||| ||| ||| |||||||| |||||||||||||||||    
T  11039979 gttcgaatcccggagaccgcacttattcaccttataaggtgaatt 11039935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 34684632 - 34684664
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||||||| |||||||||||||||||    
T  34684632 gacaccccacttattcaccttataaggtgaatt 34684664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 36576316 - 36576360
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||||||||||| |||||||||| ||||||    
T  36576316 gttcgaaccccggacaccccacttattcaccttataagatgaatt 36576360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 38433375 - 38433407
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||||||| |||||||||||||||||    
T  38433375 gacaccccacttattcaccttataaggtgaatt 38433407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 38690699 - 38690762
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| |||||  ||||||| || ||||||||||||||||  |||| ||||||||||||    
T  38690699 attatatgcaggggtcggggttcgaaccccggacaccccacttattctcctt-taaggtgaattt 38690762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 41492560 - 41492486
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttacctt--ataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  ||||||| |||||||||||||||||||||||||  | |||||||||| |||||||||    
T  41492560 attatatgcaggggccggggttcgaa-cctggacaccccacttatttaccttgaaaaaggtgaattctagccacta 41492486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 49089339 - 49089275
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| || ||| ||||||| ||  ||||  ||||||||| ||||||||||||||||||    
T  49089339 attatatgcaggggccgaagttcgaacccctgacattccacttattcaccttataaggtgaattt 49089275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 53291498 - 53291538
Alignment:
Q  41 gaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||| |||||||| ||||||| |||||||||||||||||    
T  53291498 gaatcccggacacccaacttattcaccttataaggtgaatt 53291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 11133110 - 11133182
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||||||||| |||||  ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  11133110 ttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 11133182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 16973961 - 16974020
Alignment:
Q  38 ttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    |||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||    
T  16973961 ttcgaaccccggacaccccacttatttaccttataaggtgaattctacccactaaactac 16974020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 29664637 - 29664720
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||| |||||  |||| ||||| |||||||||||||||| | ||||||||||||||| ||||||||| ||||| ||||    
T  29664637 ttatatgcaggggtcggggttcaaatcccggacaccccacttattcatcttataaggtgaattctagccactagactacctgac 29664720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 3179357 - 3179430
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| |||||| ||||||| |   ||||||||||||||| ||||||||||||||||| |||||||||    
T  3179357 attatatgcaggggtcgaggttcgaacctcagacaccccacttattcaccttataaggtgaattctagccacta 3179430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 30474257 - 30474185
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccact 89  Q
    ||||||||||| || ||| ||||||| ||  ||||||||||||||| ||||||||||||||||| ||||||||    
T  30474257 attatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtgaattctagccact 30474185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 9796930 - 9796993
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| |||||  ||||||| || |||||||||||||||| | |||||||||||||||    
T  9796930 attatatgcaggggtcggggttcgaaccccggacaccccacttattcatcttataaggtgaatt 9796993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 3037683 - 3037621
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||| || ||  ||||||| || |||||||||||||||| |||||||||||||||||    
T  3037683 ttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaatt 3037621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 8234835 - 8234781
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  8234835 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 8234781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 10262772 - 10262850
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaacta 95  Q
    ||||||||||| |||||  ||||||| ||  ||||||||||||||| ||||||||| ||||||| ||||| ||||||||    
T  10262772 attatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataaagtgaattatagcccctaaacta 10262850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 580845 - 580772
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| |||||||||| |||||| |||||||||    
T  580845 attatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataagatgaattctagccacta 580772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 17154682 - 17154755
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  ||||||| || |||||||||||||||| |||||||||||||| || |||||||||    
T  17154682 attatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgagttctagccacta 17154755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 22538572 - 22538645
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| ||| |  |||||||||| | ||||| |||||||| ||||||||||||||||| |||||||||    
T  22538572 attatatgcaggggttggggttcgaatcccgaacacctcacttattcaccttataaggtgaattctagccacta 22538645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 32891314 - 32891387
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| ||||| | |||||| || |||||||||||||||| | |||||||| |||||| |||||||||    
T  32891314 attatatgcaggggtcggttttcgaaccccggacaccccacttattcatcttataagatgaattctagccacta 32891387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 44721766 - 44721693
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| |||||  ||||||| |  |||||||||| ||||| ||||||||||||||||| |||||||||    
T  44721766 attatatgcaggggtcggggttcgaacctcggacaccccatttattcaccttataaggtgaattctagccacta 44721693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 9547189 - 9547105
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||  |||||||||| | |||||||||||||| | ||||||||||||||| |||||| || ||||| ||||    
T  9547189 attatatgcaggggccggggttcgaatcccgaacaccccacttattcatcttataaggtgaattctagccaatagactacctgac 9547105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 19905717 - 19905654
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| ||| |||||  ||||||| || |||||||| ||||||| |||||||||||||||||    
T  19905717 attatatacaggggtcggggttcgaaccccggacacccgacttattcaccttataaggtgaatt 19905654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 23405234 - 23405297
Alignment:
Q  20 tatatgcagcggtcgatgttcgaatcctggacaccccacttatttacctt-ataaggtgaattt 82  Q
    ||||||||| |||||  ||||||| ||||||||||||||||||| ||||| | |||||||||||    
T  23405234 tatatgcaggggtcggggttcgaaccctggacaccccacttattcaccttaaaaaggtgaattt 23405297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 32891632 - 32891705
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaa-tttagccacta 90  Q
    ||||||||||| ||| |  ||||||| |||| |||||||||||||| | |||| |||||||| |||||||||||    
T  32891632 attatatgcaggggttggggttcgaaccctgaacaccccacttattcatcttacaaggtgaattttagccacta 32891705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 34018102 - 34018069
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||||||||| |||||||||||||||||    
T  34018102 ggacaccccacttattcaccttataaggtgaatt 34018069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 37886268 - 37886224
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  37886268 gttcgaaccctggacaccccacttattcacctt-taaggtgaattt 37886224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 45523697 - 45523782
Alignment:
Q  17 aattatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||||| |||||  ||||||| ||   ||||| ||| |||| ||||||||||||||||| || |||||||||||| ||||    
T  45523697 aattatatgcaggggtcggggttcgaaccccaaacacctcacctattcaccttataaggtgaattctaaccactaaactacctgac 45523782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 2114497 - 2114425
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccact 89  Q
    |||||||| || |||||  ||||||| || ||||||| || ||||| ||||||||||||||||| ||||||||    
T  2114497 attatatgtaggggtcggggttcgaaccccggacacctcatttattcaccttataaggtgaattctagccact 2114425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 9791938 - 9791894
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||| |||||||||||||||||| | |||||||| ||||||    
T  9791938 gttcgaattctggacaccccacttattcatcttataagatgaatt 9791894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 31564141 - 31564201
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||| || ||| |||||||||||| |||||||||| |||||| ||||||||| |||||    
T  31564141 gttcgaaccccggaaaccccacttattcaccttataagatgaattctagccactagactac 31564201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 33001592 - 33001552
Alignment:
Q  41 gaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||| |||||||||||||||| | |||||||||||||||    
T  33001592 gaatcccggacaccccacttattcatcttataaggtgaatt 33001552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 37592272 - 37592221
Alignment:
Q  30 ggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    |||| ||||||||| ||  ||||||||||||||||||||| ||||||||||||    
T  37592272 ggtcaatgttcgaaccccagacaccccacttatttacctt-taaggtgaattt 37592221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 18202136 - 18202082
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  18202136 gttcgaatcctggacacccaacttattcaccttataaggtgaattatagccacta 18202082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 19059047 - 19058993
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||    
T  19059047 gttcgaaccctggacaccccacttattcaccttataaggtgaattctagccacta 19058993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 10508632 - 10508677
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  10508632 gttcgaaacctggacaccccacttattcaccttataaggtgaattt 10508677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 18478055 - 18478099
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  18478055 gttcgaaccctggacaccccacttattcaccttataaggtgaatt 18478099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 20762333 - 20762377
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  20762333 gttcgaaccctggacaccccacttattcaccttataaggtgaatt 20762377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 23925576 - 23925660
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| ||||   |||||||||| ||| |||||||||||| | ||||||||||||||| ||||||||| ||||| ||||    
T  23925576 attatatgcaggggtctgggttcgaatcccggataccccacttattcatcttataaggtgaattctagccactagactacttgac 23925660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 29106100 - 29106016
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||| ||||||| ||| ||||||||||||||| |||||||||||| |||| ||||||| | ||||| ||||    
T  29106100 attatatgcaggggccgaagttcgaaccctagacaccccacttattcaccttataaggttaattctagccaccagactacctgac 29106016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 5156931 - 5157014
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||  |||| | ||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||| ||||| ||||    
T  5156931 ttatatgcaagggtcaaggttcgaaccctagacaccctacttattcaccttataaggtgaattctagccactagactacctgac 5157014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 29096351 - 29096297
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  29096351 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 29096297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 1244789 - 1244716
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| ||||   ||||||| ||  ||||||||||||||| ||||||||||||||||| |||||||||    
T  1244789 attatatgcaggggtcagggttcgaaccccagacaccccacttattcaccttataaggtgaattctagccacta 1244716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 2029190 - 2029117
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| |||||   |||||| || | |||||||||||||| ||||||||||||||||| |||||||||    
T  2029190 attatatgcaggggtcgggattcgaaccccgaacaccccacttattcaccttataaggtgaattctagccacta 2029117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 20945953 - 20945880
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  |||||||  | |||||||||||||||| ||||||||||||||||| |||||||||    
T  20945953 attatatgcaggggccggggttcgaaatccggacaccccacttattcaccttataaggtgaattctagccacta 20945880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 32158476 - 32158403
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  ||||||| || | |||||||||||||| ||||||||||||||||| |||||||||    
T  32158476 attatatgcaggggccggggttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccacta 32158403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 42455456 - 42455383
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  ||||||| || |||||| ||||||||| ||||||||||||||||| |||||||||    
T  42455456 attatatgcaggggccggagttcgaaccccggacactccacttattcaccttataaggtgaattctagccacta 42455383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 8015887 - 8015931
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||||||||||| |||||||||||||||||    
T  8015887 gttcgaaccccggacaccccacttattcaccttataaggtgaatt 8015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 21212946 - 21213006
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactac 96  Q
    ||||||| |||| ||| |||||||||||| ||||||||||||||| |||||| ||||||||    
T  21212946 gttcgaaccctgaacatcccacttatttatcttataaggtgaattctagccattaaactac 21213006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 38618724 - 38618680
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||| || |||||||||||||||| |||||||||||||||||    
T  38618724 gttcgaaccccggacaccccacttattcaccttataaggtgaatt 38618680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 13754039 - 13754102
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| ||||||||||||||    |||||||||| ||||| | |||||||||||||||    
T  13754039 attatatgcaggggtcgatgttcgaacgtcggacaccccatttattcatcttataaggtgaatt 13754102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 33729811 - 33729874
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  |||||||||   ||||||||||||||| |||||||||||||||||    
T  33729811 attatatgcaggggccggggttcgaatctcagacaccccacttattcaccttataaggtgaatt 33729874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 36888155 - 36888092
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| || ||  ||| |||||||||| |||||||||||| | |||||||||||||||    
T  36888155 attatatgcaggggccggggttggaatcctggagaccccacttattcatcttataaggtgaatt 36888092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 43404443 - 43404478
Alignment:
Q  46 ctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||||| |||||||||||||||||||||||    
T  43404443 ctggacaccccatttatttaccttataaggtgaatt 43404478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 4216876 - 4216814
Alignment:
Q  19 ttatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||||| ||| |  ||| ||||||  ||||||||||||||| |||||||||||||||||    
T  4216876 ttatatgcaggggttggagtttgaatcccagacaccccacttattcaccttataaggtgaatt 4216814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 21360461 - 21360503
Alignment:
Q  49 gacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  21360461 gacaccccacttatttaccttataaagtgaattctagccacta 21360503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 30403813 - 30403867
Alignment:
Q  48 ggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||||||||||||| ||||||||||||||||| || ||||||| |||| ||||    
T  30403813 ggacaccccacttattcaccttataaggtgaattctaaccactaagctacctgac 30403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 43166721 - 43166775
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||   |||||||||||||| ||||||||||||||||| |||||||||    
T  43166721 gttcgaatcccaaacaccccacttattcaccttataaggtgaattctagccacta 43166775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 27440360 - 27440299
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaa 79  Q
    ||||||||||| |||||| ||||||| || | |||||| || |||| |||||||||||||||    
T  27440360 attatatgcagtggtcgaggttcgaaccccgaacaccctacatattcaccttataaggtgaa 27440299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 37303967 - 37304012
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatt 63  Q
    ||||||||||| |||||  ||||||| |||||||||||||||||||    
T  37303967 attatatgcaggggtcggggttcgaaccctggacaccccacttatt 37304012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 40339161 - 40339089
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||| || ||  ||||||| ||||||||||| | ||||| ||||||||||||||||| |||||||||    
T  40339161 attatatgcaggggccggggttcgaa-cctggacacccaatttattcaccttataaggtgaattctagccacta 40339089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 7645164 - 7645100
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| ||| |  |||| |||  |||||||| |||||||| ||||||||||||||||||    
T  7645164 attatatgcagaggttggagttcaaattttggacacctcacttattcaccttataaggtgaattt 7645100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 15978707 - 15978675
Alignment:
Q  50 acaccccacttatttaccttataaggtgaattt 82  Q
    |||||||||||||| ||||||||||||||||||    
T  15978707 acaccccacttattcaccttataaggtgaattt 15978675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 29629987 - 29629923
Alignment:
Q  38 ttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    |||||| |||||||||| |||||||| | ||||||||||||||| ||||||| | ||||| ||||    
T  29629987 ttcgaaccctggacacctcacttattcatcttataaggtgaattctagccaccagactacttgac 29629923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 33800926 - 33800986
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtga 78  Q
    ||||||||||| || ||  ||||||| ||  ||||||||||||||| ||||||||||||||    
T  33800926 attatatgcaggggccggggttcgaaccccagacaccccacttattcaccttataaggtga 33800986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 34729505 - 34729567
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaattt 82  Q
    ||||||||||| |||||  ||||||| || |||||||||||||||| ||||| ||||||||||||    
T  34729505 attatatgcaggggtcggggttcgaaccc-ggacaccccacttattcacctt-taaggtgaattt 34729567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 2521 - 2605
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| ||| || ||| ||| || |||||||||||||||| |||||||||||||||||  |||||||| ||||| ||||    
T  2521 attatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaattccagccactagactacctgac 2605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 946 - 1000
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||| |||||||||    
T  946 gttcgaatcccagacaccccacttattcaccttataaggtgaattctagccacta 1000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 47360 - 47306
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||| |||||||||    
T  47360 gttcgaatcccagacaccccacttattcaccttataaggtgaattctagccacta 47306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 101864 - 101948
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||||||| || ||  ||||||| ||   ||| |||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  101864 attatatgcaggggccggggttcgaaccccaaacatcccacttattcaccttataaggtgaattctagccactagactacgtgac 101948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 133158 - 133114
Alignment:
Q  39 tcgaatcctggacaccccacttatttaccttataaggtgaattta 83  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||    
T  133158 tcgaaccctggacatcccacttattcaccttataaggtgaattta 133114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 4356 - 4419
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    ||||||||||| |||||  ||||||| || |||||| ||||||||| || ||||||||||||||    
T  4356 attatatgcaggggtcggggttcgaaccccggacactccacttattcactttataaggtgaatt 4419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 9359 - 9432
Alignment:
Q  18 attatatgcagcggtcgatgttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccacta 90  Q
    |||| |||||| |||||  |||||||| | | |||| ||||||||| ||||||||||||||||| |||||||||    
T  9359 attacatgcaggggtcggggttcgaattccgaacactccacttattcaccttataaggtgaattctagccacta 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 37375 - 37338
Alignment:
Q  33 cgatgttcgaatcctggacaccccacttatttacctta 70  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  37375 cgatgttcgaaacctggacaccccacttattcacctta 37338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 49872 - 49937
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt-tagccactaaactacgtgac 101  Q
    ||||||| || | |||||||||||||| | ||||||||||||||| ||||||||| ||||| ||||    
T  49872 gttcgaaccccgtacaccccacttattcaacttataaggtgaattctagccactagactacctgac 49937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 796 - 840
Alignment:
Q  37 gttcgaatcctggacaccccacttatttaccttataaggtgaatt 81  Q
    |||||||  |||||||||||||||||| ||||||||| |||||||    
T  796 gttcgaactctggacaccccacttattcaccttataaagtgaatt 840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University