View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18225_high_3 (Length: 412)

Name: NF18225_high_3
Description: NF18225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18225_high_3
NF18225_high_3
[»] chr6 (43 HSPs)
chr6 (105-394)||(31965591-31965881)
chr6 (106-228)||(29682515-29682637)
chr6 (105-199)||(20222856-20222950)
chr6 (105-199)||(22116840-22116934)
chr6 (180-375)||(20222273-20222466)
chr6 (180-375)||(22116257-22116450)
chr6 (105-237)||(23348194-23348325)
chr6 (187-336)||(20221042-20221187)
chr6 (187-336)||(22115026-22115171)
chr6 (105-215)||(16207774-16207883)
chr6 (145-228)||(15172165-15172246)
chr6 (248-362)||(20222722-20222836)
chr6 (248-362)||(22116706-22116820)
chr6 (119-229)||(24392933-24393042)
chr6 (105-239)||(25949239-25949372)
chr6 (105-229)||(18973588-18973711)
chr6 (105-226)||(20464300-20464421)
chr6 (145-237)||(15471167-15471257)
chr6 (105-229)||(25923428-25923551)
chr6 (153-239)||(18993108-18993193)
chr6 (183-237)||(19612856-19612910)
chr6 (105-239)||(25339288-25339421)
chr6 (105-227)||(25963851-25963972)
chr6 (105-227)||(25968498-25968619)
chr6 (183-237)||(26821793-26821847)
chr6 (147-228)||(15162127-15162206)
chr6 (151-239)||(18627341-18627428)
chr6 (183-237)||(17794083-17794137)
chr6 (105-229)||(28734180-28734304)
chr6 (122-229)||(29093483-29093589)
chr6 (105-231)||(18396545-18396671)
chr6 (153-226)||(24545701-24545773)
chr6 (105-229)||(25031258-25031382)
chr6 (105-140)||(17743527-17743562)
chr6 (105-140)||(18233854-18233889)
chr6 (105-140)||(20221190-20221225)
chr6 (105-140)||(22115174-22115209)
chr6 (197-228)||(29686784-29686815)
chr6 (153-239)||(32543174-32543259)
chr6 (159-199)||(32796647-32796688)
chr6 (183-239)||(19993509-19993565)
chr6 (208-240)||(22601499-22601531)
chr6 (105-137)||(25507616-25507648)
[»] chr7 (18 HSPs)
chr7 (105-388)||(38877168-38877449)
chr7 (105-229)||(4983193-4983316)
chr7 (106-228)||(679543-679665)
chr7 (105-227)||(4541084-4541205)
chr7 (105-229)||(17911514-17911637)
chr7 (152-223)||(15522995-15523066)
chr7 (105-237)||(30063994-30064127)
chr7 (105-229)||(17206438-17206561)
chr7 (157-223)||(3194559-3194625)
chr7 (105-239)||(33609629-33609762)
chr7 (105-231)||(4460805-4460931)
chr7 (153-239)||(5825968-5826053)
chr7 (105-169)||(41722686-41722750)
chr7 (105-172)||(48355627-48355694)
chr7 (195-237)||(4465884-4465926)
chr7 (105-139)||(9264426-9264460)
chr7 (153-239)||(16897355-16897440)
chr7 (198-239)||(48713392-48713433)
[»] chr4 (14 HSPs)
chr4 (112-395)||(23793645-23793917)
chr4 (105-237)||(5513682-5513814)
chr4 (108-237)||(5675371-5675499)
chr4 (106-227)||(9487086-9487206)
chr4 (106-237)||(33331042-33331172)
chr4 (105-229)||(11922491-11922615)
chr4 (105-237)||(12345992-12346124)
chr4 (105-239)||(31593808-31593941)
chr4 (105-172)||(11889013-11889080)
chr4 (105-140)||(11902658-11902693)
chr4 (153-239)||(10731068-10731153)
chr4 (153-239)||(10944837-10944922)
chr4 (157-199)||(12506587-12506629)
chr4 (108-199)||(12347309-12347401)
[»] chr2 (21 HSPs)
chr2 (105-387)||(24371481-24371763)
chr2 (105-237)||(20852037-20852168)
chr2 (105-237)||(19124374-19124505)
chr2 (105-237)||(24321711-24321843)
chr2 (122-231)||(19013084-19013193)
chr2 (105-231)||(23257053-23257178)
chr2 (108-237)||(15583724-15583853)
chr2 (105-239)||(20281966-20282099)
chr2 (108-199)||(22578402-22578493)
chr2 (153-225)||(21503-21574)
chr2 (183-239)||(23698926-23698982)
chr2 (153-229)||(41653698-41653773)
chr2 (122-229)||(11391048-11391154)
chr2 (122-229)||(11407709-11407815)
chr2 (105-140)||(23340593-23340628)
chr2 (105-171)||(16134233-16134299)
chr2 (161-227)||(21344582-21344647)
chr2 (153-239)||(32441433-32441518)
chr2 (158-231)||(24366389-24366462)
chr2 (158-231)||(24369112-24369185)
chr2 (157-192)||(15027402-15027438)
[»] scaffold0855 (1 HSPs)
scaffold0855 (105-295)||(3325-3513)
[»] scaffold0847 (1 HSPs)
scaffold0847 (105-295)||(3490-3678)
[»] chr8 (11 HSPs)
chr8 (106-396)||(24221594-24221882)
chr8 (105-231)||(22904520-22904644)
chr8 (105-230)||(24341979-24342104)
chr8 (105-239)||(14162190-14162323)
chr8 (151-237)||(18008056-18008143)
chr8 (105-226)||(19792272-19792393)
chr8 (105-239)||(23221549-23221682)
chr8 (157-199)||(7465513-7465556)
chr8 (105-140)||(25396947-25396982)
chr8 (105-140)||(26012992-26013027)
chr8 (198-231)||(21139587-21139620)
[»] chr5 (11 HSPs)
chr5 (111-296)||(23029627-23029811)
chr5 (105-296)||(24166117-24166305)
chr5 (105-237)||(22170701-22170832)
chr5 (122-237)||(12410442-12410556)
chr5 (105-237)||(16676995-16677127)
chr5 (140-219)||(23110769-23110846)
chr5 (106-172)||(20915993-20916059)
chr5 (185-239)||(34223246-34223300)
chr5 (105-173)||(24214722-24214790)
chr5 (105-140)||(22942370-22942405)
chr5 (157-235)||(20738268-20738346)
[»] scaffold0014 (1 HSPs)
scaffold0014 (106-239)||(168107-168240)
[»] chr1 (19 HSPs)
chr1 (105-237)||(20860790-20860921)
chr1 (105-231)||(20899437-20899562)
chr1 (118-237)||(23298806-23298924)
chr1 (105-217)||(26194180-26194291)
chr1 (105-239)||(13799493-13799626)
chr1 (105-227)||(16384993-16385115)
chr1 (106-219)||(15347023-15347136)
chr1 (105-165)||(25405124-25405184)
chr1 (105-229)||(16148490-16148614)
chr1 (105-172)||(2386202-2386269)
chr1 (105-140)||(20412277-20412312)
chr1 (157-231)||(8648785-8648859)
chr1 (153-239)||(17716666-17716751)
chr1 (157-231)||(30819162-30819236)
chr1 (153-239)||(48256226-48256311)
chr1 (122-239)||(52235908-52236025)
chr1 (105-138)||(17986584-17986617)
chr1 (153-229)||(16431492-16431567)
chr1 (198-230)||(20412181-20412213)
[»] chr3 (19 HSPs)
chr3 (108-229)||(41545798-41545918)
chr3 (105-229)||(8685889-8686012)
chr3 (105-237)||(11869878-11870009)
chr3 (105-237)||(16703708-16703840)
chr3 (145-237)||(8531806-8531897)
chr3 (105-239)||(42244590-42244723)
chr3 (106-199)||(27992765-27992858)
chr3 (105-239)||(17041647-17041780)
chr3 (105-231)||(13069692-13069818)
chr3 (105-229)||(7908445-7908568)
chr3 (105-231)||(17023155-17023281)
chr3 (153-239)||(17209561-17209645)
chr3 (183-239)||(13418299-13418355)
chr3 (105-173)||(19656145-19656213)
chr3 (105-172)||(2721912-2721979)
chr3 (185-239)||(27407123-27407177)
chr3 (161-239)||(36076110-36076187)
chr3 (198-239)||(13604958-13604999)
chr3 (198-239)||(14659228-14659269)
[»] scaffold0001 (2 HSPs)
scaffold0001 (105-227)||(82650-82772)
scaffold0001 (151-231)||(520670-520749)
[»] scaffold1559 (1 HSPs)
scaffold1559 (108-226)||(1328-1445)
[»] scaffold0011 (1 HSPs)
scaffold0011 (105-239)||(172650-172783)
[»] scaffold0074 (1 HSPs)
scaffold0074 (105-229)||(22780-22903)
[»] scaffold0916 (1 HSPs)
scaffold0916 (105-239)||(3426-3560)
[»] scaffold0088 (1 HSPs)
scaffold0088 (105-198)||(38447-38540)
[»] scaffold0031 (1 HSPs)
scaffold0031 (105-172)||(23245-23312)
[»] scaffold0098 (1 HSPs)
scaffold0098 (198-239)||(44411-44452)
[»] scaffold0197 (1 HSPs)
scaffold0197 (153-229)||(8947-9022)
[»] scaffold0123 (2 HSPs)
scaffold0123 (183-227)||(14029-14073)
scaffold0123 (105-172)||(2489-2556)
[»] scaffold0075 (1 HSPs)
scaffold0075 (105-173)||(19410-19478)
[»] scaffold1323 (1 HSPs)
scaffold1323 (105-172)||(1948-2015)
[»] scaffold1208 (1 HSPs)
scaffold1208 (105-172)||(1987-2054)
[»] scaffold0447 (2 HSPs)
scaffold0447 (105-172)||(6399-6466)
scaffold0447 (105-172)||(11013-11080)
[»] scaffold0383 (1 HSPs)
scaffold0383 (105-172)||(9008-9075)
[»] scaffold0035 (2 HSPs)
scaffold0035 (157-199)||(31224-31267)
scaffold0035 (159-199)||(33374-33415)
[»] scaffold0157 (1 HSPs)
scaffold0157 (157-199)||(13848-13890)
[»] scaffold0012 (1 HSPs)
scaffold0012 (105-139)||(49904-49938)
[»] scaffold0362 (1 HSPs)
scaffold0362 (198-239)||(9293-9334)
[»] scaffold0142 (1 HSPs)
scaffold0142 (105-173)||(26888-26956)


Alignment Details
Target: chr6 (Bit Score: 243; Significance: 1e-134; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 105 - 394
Target Start/End: Original strand, 31965591 - 31965881
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31965591 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 31965690  T
Q  205 caatagaatgttccacaagaaa-ccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttc 303  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||| ||||||| |||||| ||||||| ||||||||||||||||||| |    
T  31965691 caatagaatgttccacaacaaaaccatgggcttttatatatcagaattacactaaaaaggcatatggatcaggaagcaaaagcagcaaaaggaaagctgc 31965790  T
Q  304 cagtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacgggttgtg 394  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31965791 cagtcgcacacgaccgcgtggcttgaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacgggttgtg 31965881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 29682637 - 29682515
Alignment:
Q  106 aattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatc 205  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||| |||    
T  29682637 aattgtcacttagaatttccaagaataaaagatgaaaatatatgtctgctagcttctctatttatagctaaaaactaacttaagccccaagaaatatatc 29682538  T
Q  206 aatagaatgttccacaagaaacc 228  Q
    |||||||||||||||||||||||    
T  29682537 aatagaatgttccacaagaaacc 29682515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 20222950 - 20222856
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaa 199  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  20222950 caattgtcacttattatttccaagaacaaaagatgagaatatatgttttctagttgctctatttatagcctaaaactaacttaagccccaagaaa 20222856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 22116934 - 22116840
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaa 199  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  22116934 caattgtcacttattatttccaagaacaaaagatgagaatatatgttttctagttgctctatttatagcctaaaactaacttaagccccaagaaa 22116840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 180 - 375
Target Start/End: Complemental strand, 20222466 - 20222273
Alignment:
Q  180 ctaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaag 279  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||||||  ||||  ||  ||| ||||||||||| |||||| ||||||| |||||    
T  20222466 ctaaattaagccccaagaaatacatcaatacaatgttccaaaagaaaccatgaccttt--taggtcagaattacactaaaaaggcaactggatcaggaag 20222369  T
Q  280 cagaagcagc-aaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaac 375  Q
    || ||||||| ||||||||| ||   ||||||||| | || ||||||| ||  |||||| |||  ||||||||||||||||||||||| ||||||||    
T  20222368 caaaagcagcaaaaaggaaacctgttagtcgcacaaggcc-tgtggctggagacacgggtcgtttgctcctctctggttgttggccttgtttgaaac 20222273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 180 - 375
Target Start/End: Complemental strand, 22116450 - 22116257
Alignment:
Q  180 ctaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaag 279  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||||||  ||||  ||  ||| ||||||||||| |||||| ||||||| |||||    
T  22116450 ctaaattaagccccaagaaatacatcaatacaatgttccaaaagaaaccatgaccttt--taggtcagaattacactaaaaaggcaactggatcaggaag 22116353  T
Q  280 cagaagcagc-aaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaac 375  Q
    || ||||||| ||||||||| ||   ||||||||| | || ||||||| ||  |||||| |||  ||||||||||||||||||||||| ||||||||    
T  22116352 caaaagcagcaaaaaggaaacctgttagtcgcacaaggcc-tgtggctggagacacgggtcgtttgctcctctctggttgttggccttgtttgaaac 22116257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 23348194 - 23348325
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  |||||||  ||||||||||||||  | || || ||||||||| |||||||||||| ||| ||||| |||||||||||||||||||||    
T  23348194 caattgtcactattaatttcagagaacaaaagatgaataaatgtgattgctagctactctatttatagtctacaacta-cttaagccccaagaaatacat 23348292  T
Q  205 caatagaatgttccacaagaaaccatgtgcttt 237  Q
    ||||| ||||||||||| ||||||||| |||||    
T  23348293 caatataatgttccacatgaaaccatgggcttt 23348325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 187 - 336
Target Start/End: Complemental strand, 20221187 - 20221042
Alignment:
Q  187 aagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagc 286  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  |||    |  ||| ||||| ||||| |||||| ||||||| ||||||| ||||    
T  20221187 aagccccaagaaatacatcaatagaatgttccacaagaaaacatggtctt----aggtcagaattatactaaaaaggcagctggatcaggaagcaaaagc 20221092  T
Q  287 agcaaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgg 336  Q
    | |||||||||||||  ||||| |||||| || ||||||| |||||||||    
T  20221091 aacaaaaggaaagctgtcagtcccacacggccatgtggctggaagcacgg 20221042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 187 - 336
Target Start/End: Complemental strand, 22115171 - 22115026
Alignment:
Q  187 aagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagc 286  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  |||    |  ||| ||||| ||||| |||||| ||||||| ||||||| ||||    
T  22115171 aagccccaagaaatacatcaatagaatgttccacaagaaaacatggtctt----aggtcagaattatactaaaaaggcagctggatcaggaagcaaaagc 22115076  T
Q  287 agcaaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgg 336  Q
    | |||||||||||||  ||||| |||||| || ||||||| |||||||||    
T  22115075 aacaaaaggaaagctgtcagtcccacacggccatgtggctggaagcacgg 22115026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 16207774 - 16207883
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    ||||||||||||||||||||  | |||||||||||||   |||||||||||||||||||||||| ||| ||| |||| |||||| | | |||||||||||    
T  16207774 caattgtcacttataatttctgaaaacaaaagatgactcaatatgtttgctagctgctctatttgtagtctacaact-acttaatctctaagaaatacat 16207872  T
Q  205 caatagaatgt 215  Q
    |||||||||||    
T  16207873 caatagaatgt 16207883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 15172246 - 15172165
Alignment:
Q  145 atatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaacc 228  Q
    ||||||||||||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||||    
T  15172246 atatgtttgctagctactctatttatagtctacaacta-cttaagccc-aagaaatacatcaatagaatgttccacgagaaacc 15172165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 362
Target Start/End: Complemental strand, 20222836 - 20222722
Alignment:
Q  248 aattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgggccgtgcgctc 347  Q
    ||||| ||||| |||| | || |||| ||||||| ||||| |||||||||||||  |||||||||||| || |||||||||||||| |||| ||  ||||    
T  20222836 aattatactaaaaaggtagctagatcaggaagcaaaagcaacaaaaggaaagctgtcagtcgcacacggccatgtggctagaagcatgggctgtttgctc 20222737  T
Q  348 ctctctggttgttgg 362  Q
    |||||||||||||||    
T  20222736 ctctctggttgttgg 20222722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 362
Target Start/End: Complemental strand, 22116820 - 22116706
Alignment:
Q  248 aattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgggccgtgcgctc 347  Q
    ||||| ||||| |||| | || |||| ||||||| ||||| |||||||||||||  |||||||||||| || |||||||||||||| |||| ||  ||||    
T  22116820 aattatactaaaaaggtagctagatcaggaagcaaaagcaacaaaaggaaagctgtcagtcgcacacggccatgtggctagaagcatgggctgtttgctc 22116721  T
Q  348 ctctctggttgttgg 362  Q
    |||||||||||||||    
T  22116720 ctctctggttgttgg 22116706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 24392933 - 24393042
Alignment:
Q  119 aatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttcc 218  Q
    ||||||||||||||| ||||||    |||| |||| ||||| ||||||||||||  || ||||| || ||||||||||||||||||||||||||| ||||    
T  24392933 aatttccaagaacaagagatgattgaatatttttggtagctactctatttatagtttacaacta-ctaaagccccaagaaatacatcaatagaatattcc 24393031  T
Q  219 acaagaaacca 229  Q
    |||||||||||    
T  24393032 acaagaaacca 24393042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 25949372 - 25949239
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||     |||| | ||||||| |||||||||||| ||| || | ||||||  || ||| |||||||    
T  25949372 caattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtctataa-tgacttaaaacctaagcaatacat 25949274  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||||||||||||| | |||||||    
T  25949273 cactagaatgttccacaagaaaccaagggctttta 25949239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 18973711 - 18973588
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||   ||||||||||||||| |||| |    ||||||||||||||| ||||||||||||  || ||||| || || |||||||||||||||    
T  18973711 caattgtcactataaatttccaagaacaagagataattgaatatgtttgctagctactctatttatagtttacaacta-ctaaaaccccaagaaatacat 18973613  T
Q  205 caatagaatgttccacaagaaacca 229  Q
     |||||||| |||||||||||||||    
T  18973612 taatagaatattccacaagaaacca 18973588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 226
Target Start/End: Complemental strand, 20464421 - 20464300
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    ||||||||||||||||||| ||||||||||||||||  | | ||||  | | | ||||||||||||||| ||| ||| |||||||||| |||||||| ||    
T  20464421 caattgtcacttataattttcaagaacaaaagatgaatagacatgtccgatggttgctctatttatagcttaatactgacttaagccctaagaaataaat 20464322  T
Q  205 caatagaatgttccacaagaaa 226  Q
    || |||  |||| |||||||||    
T  20464321 cactagcgtgttacacaagaaa 20464300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 15471167 - 15471257
Alignment:
Q  145 atatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgcttt 237  Q
    ||||||||||||||| |||||||||||| ||| || || ||||||||| ||||||||||||||||||||||| ||| ||||||| || |||||    
T  15471167 atatgtttgctagctactctatttatagtctacaaata-cttaagccc-aagaaatacatcaatagaatgttgcacgagaaaccgtgggcttt 15471257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 25923428 - 25923551
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  | | |||||||||||||||||||     |||| ||||||||| ||||||||||||  || |  | |||||||||| |||||||||||    
T  25923428 caattgtcactattgaattccaagaacaaaagatgaattgttatgattgctagctactctatttatagtttacat-tgacttaagccctaagaaatacat 25923526  T
Q  205 caatagaatgttccacaagaaacca 229  Q
    || ||||||||||||||||||||||    
T  25923527 cactagaatgttccacaagaaacca 25923551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 18993193 - 18993108
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| ||||||||||||  || || | |||||||||| |||||||| |||| |||||||||||||||||||||||| |||||||    
T  18993193 gctagctactctatttatagtttacaa-tgacttaagccctaagaaatatatcactagaatgttccacaagaaaccatgggctttta 18993108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 19612856 - 19612910
Alignment:
Q  183 acttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgcttt 237  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||| |||||    
T  19612856 acttaagccccatgaaatatatcaatagaatgttccacaagaaaccatgggcttt 19612910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 239
Target Start/End: Original strand, 25339288 - 25339421
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  | | |||||||||||||||||||     | || ||||||||| ||||||||||||  || || | |||||||||| |||||||| ||    
T  25339288 caattgtcactattgaattccaagaacaaaagatgaattgttgtgattgctagctactctatttatagtttacaa-tgacttaagccctaagaaatatat 25339386  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||||||||||||| | |||||||    
T  25339387 cactagaatgttccacaagaaaccacgggctttta 25339421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 25963972 - 25963851
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||     |||| | ||||||| |||||||||||| | | |||  ||||||  || ||| |||||||    
T  25963972 caattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtcgataac-gacttaaaacctaagcaatacat 25963874  T
Q  205 caatagaatgttccacaagaaac 227  Q
    || ||||||||||||||||||||    
T  25963873 cactagaatgttccacaagaaac 25963851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 25968619 - 25968498
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||     |||| | ||||||| |||||||||||| | | |||  ||||||  || ||| |||||||    
T  25968619 caattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtcgataac-gacttaaaacctaagcaatacat 25968521  T
Q  205 caatagaatgttccacaagaaac 227  Q
    || ||||||||||||||||||||    
T  25968520 cactagaatgttccacaagaaac 25968498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 26821847 - 26821793
Alignment:
Q  183 acttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgcttt 237  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  26821847 acttaagccctaagaaatacatcaatagaatgtttcacaagaaaccatgggcttt 26821793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 15162206 - 15162127
Alignment:
Q  147 atgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaacc 228  Q
    |||| ||||||||  ||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||||    
T  15162206 atgtatgctagctattctatttatagtctacaacta-cttaagccc-aagaaatacatcaatagaatgttccacgagaaacc 15162127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 18627428 - 18627341
Alignment:
Q  151 ttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||||| ||||||||||||  || || | |||||||||| |||||||| |||| ||||||||||||||| |||||||| |||||||    
T  18627428 ttgctagctactctatttatagtttacaa-tgacttaagccctaagaaatatatcattagaatgttccacaaaaaaccatgggctttta 18627341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 17794083 - 17794137
Alignment:
Q  183 acttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgcttt 237  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||| |||||    
T  17794083 acttaagacccaagaaatacatcagtagaatgttccacaagaaactatgggcttt 17794137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 28734180 - 28734304
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  ||| |||| ||||||||||||||  ||| | | ||  | |||||||||||||||| |||| | | |||||||||| |||||||| ||    
T  28734180 caattgtcactattaaattccgagaacaaaagatgattatacaagctttatggctgctctatttatagtctaacaatgacttaagccctaagaaataaat 28734279  T
Q  205 caatagaatgttccacaagaaacca 229  Q
    || || | |||| ||||||||||||    
T  28734280 cactaaagtgttgcacaagaaacca 28734304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 29093589 - 29093483
Alignment:
Q  122 ttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccaca 221  Q
    |||||||||||||||||||     |||| | ||||||| |||||||||||| ||| ||| | |||||  || ||| ||||||||| ||||||||||||||    
T  29093589 ttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccaca 29093491  T
Q  222 agaaacca 229  Q
    ||||||||    
T  29093490 agaaacca 29093483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 18396545 - 18396671
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  | | |||||||||||||||||||  ||| | | | | | |||||||||||||||| |||| | | |||| ||||| |||||||| ||    
T  18396545 caattgtcactattgaattccaagaacaaaagatgattatacaagctagatggctgctctatttatagtctaacattgacttgagccctaagaaataaat 18396644  T
Q  205 caatagaatgttccacaagaaaccatg 231  Q
    || || | |||| ||||||||||||||    
T  18396645 cactaaagtgttgcacaagaaaccatg 18396671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 24545701 - 24545773
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaa 226  Q
    ||||||| ||||||||||||  || || | |||||||| | ||||||||||||| |||||||||||||||||||    
T  24545701 gctagctactctatttatagtttacaa-tgacttaagctctaagaaatacatcactagaatgttccacaagaaa 24545773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 25031258 - 25031382
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  |||||||  ||||||||||||||  ||| | | ||| | | |||||||||||||| | || | | |||||||||| |||||||| ||    
T  25031258 caattgtcactattaatttcagagaacaaaagatgattatacaagcttgatggttgctctatttatagtccaacattgacttaagccctaagaaataaat 25031357  T
Q  205 caatagaatgttccacaagaaacca 229  Q
    || || | |||| ||||||||||||    
T  25031358 cactaaagtgttgcacaagaaacca 25031382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 17743562 - 17743527
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatga 140  Q
    |||||||||||||| |||||||||||||||||||||    
T  17743562 caattgtcacttattatttccaagaacaaaagatga 17743527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 18233854 - 18233889
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatga 140  Q
    |||||||||||||| |||||||||||||||||||||    
T  18233854 caattgtcacttattatttccaagaacaaaagatga 18233889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 20221225 - 20221190
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatga 140  Q
    |||||||||||||| |||||||||||||||||||||    
T  20221225 caattgtcacttattatttccaagaacaaaagatga 20221190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 22115209 - 22115174
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatga 140  Q
    |||||||||||||| |||||||||||||||||||||    
T  22115209 caattgtcacttattatttccaagaacaaaagatga 22115174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 228
Target Start/End: Complemental strand, 29686815 - 29686784
Alignment:
Q  197 aaatacatcaatagaatgttccacaagaaacc 228  Q
    ||||||||||||||||||||||||||||||||    
T  29686815 aaatacatcaatagaatgttccacaagaaacc 29686784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 32543259 - 32543174
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| |||||||||||| ||| ||| | |||||  || ||| ||||||||| ||| |||||||||||||||||| | |||||||    
T  32543259 gctagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactaggatgttccacaagaaaccaagggctttta 32543174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 32796647 - 32796688
Alignment:
Q  159 tgctctatttatagcctaaaa-ctaacttaagccccaagaaa 199  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  32796647 tgctctatttatagcctaaaagctaacttaagccctaagaaa 32796688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 19993565 - 19993509
Alignment:
Q  183 acttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| || | |||||| |||| |||||||||||||||||||||| | |||||||    
T  19993565 acttaagacctatgaaatatatcactagaatgttccacaagaaaccacgagctttta 19993509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 22601499 - 22601531
Alignment:
Q  208 tagaatgttccacaagaaaccatgtgcttttat 240  Q
    |||||||||||||||||||||||| ||||||||    
T  22601499 tagaatgttccacaagaaaccatgggcttttat 22601531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 25507648 - 25507616
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaaga 137  Q
    |||||||||||||| ||||||||||||||||||    
T  25507648 caattgtcacttattatttccaagaacaaaaga 25507616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 105 - 388
Target Start/End: Complemental strand, 38877449 - 38877168
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  38877449 caattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctatctgctctatttatagcctaaaactaacttaagccccaagaattacat 38877350  T
Q  205 caatagaatgttccacaagaaaccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttcc 304  Q
    ||||||||||||||||||||||||||| |||||  ||  ||| ||||||||||| ||||||  ||| || ||||||| |||||||||||||||||||  |    
T  38877349 caatagaatgttccacaagaaaccatgggcttt--taagtcagaattacactaaaaaggcagttgggtcaggaagcaaaagcagcaaaaggaaagctgtc 38877252  T
Q  305 agtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacgg 388  Q
    ||||||||||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||    
T  38877251 agtcgcacacggccgtgtggctggaggcacgggccgtgtgctcctctctggttgctggccttctttgaaacattgcaggcacgg 38877168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 4983193 - 4983316
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||    |||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  4983193 caattgtcacttattatttccaagaacaaaagatgattgaatatgtttgctagctgctctatttataggctacaacta-cttaagccccaagaaatacat 4983291  T
Q  205 caatagaatgttccacaagaaacca 229  Q
    ||||| |||||||||||||||||||    
T  4983292 caatataatgttccacaagaaacca 4983316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 106 - 228
Target Start/End: Original strand, 679543 - 679665
Alignment:
Q  106 aattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatc 205  Q
    |||||||||||| ||||| |||||||||||||||| | || | || ||||||||||||  ||||||||||||||||||||||||||| |||||||  |||    
T  679543 aattgtcacttagaattttcaagaacaaaagatgagattacaagtctgctagctgctccttttatagcctaaaactaacttaagccctaagaaattaatc 679642  T
Q  206 aatagaatgttccacaagaaacc 228  Q
    | |||||||||||||||| ||||    
T  679643 actagaatgttccacaagcaacc 679665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 4541205 - 4541084
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||| || |||| ||||||||    || ||||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  4541205 caattgtcacttattatttgcacgaacgaaagatgaatgaatgtgtttgctaactgctctatttatagtctacaacta-cttaagccccaagaaatacat 4541107  T
Q  205 caatagaatgttccacaagaaac 227  Q
    ||||||| |||||||||||||||    
T  4541106 caatagagtgttccacaagaaac 4541084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 17911637 - 17911514
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    ||||||| |||  |||||||||||||||| ||||||    |||| |||||||||| ||||||||||||  ||  |||| |||||||||||||||||||||    
T  17911637 caattgtaactattaatttccaagaacaagagatgattcaatatatttgctagctactctatttatagtttacgacta-cttaagccccaagaaatacat 17911539  T
Q  205 caatagaatgttccacaagaaacca 229  Q
    |||||||||||||||||||||||||    
T  17911538 caatagaatgttccacaagaaacca 17911514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 15523066 - 15522995
Alignment:
Q  152 tgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaag 223  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  15523066 tgctagcggctctatttatagcctaaaacaaacttaaaccccaagaaatacatcaattgaatgttccacaag 15522995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 30063994 - 30064127
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaat---atatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaata 201  Q
    |||||||||||  ||| ||||||||||| |||| || |||   |||||||||||||||  ||||||||||| ||  ||||| ||||||| ||||||||||    
T  30063994 caattgtcactattaaattccaagaacacaaga-gataattcaatatgtttgctagctattctatttatagtctgcaacta-cttaagcaccaagaaata 30064091  T
Q  202 catcaatagaatgttccacaagaaaccatgtgcttt 237  Q
    ||||||| |||||||||||||||||||||| |||||    
T  30064092 catcaatggaatgttccacaagaaaccatgggcttt 30064127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 17206438 - 17206561
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||     | || ||||||||| ||||||||||||  || || | |||||||||| |||||||| ||    
T  17206438 caattgtcacttattatttccaagaacaaaagatgaattgttgtgattgctagctactctatttatagtttacaa-tgacttaagccctaagaaatatat 17206536  T
Q  205 caatagaatgttccacaagaaacca 229  Q
    || ||||||||||||||||||||||    
T  17206537 cactagaatgttccacaagaaacca 17206561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 3194559 - 3194625
Alignment:
Q  157 gctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaag 223  Q
    ||||||||||||||||||||||||| |||||||||| |||||||  |||| ||||| ||||||||||    
T  3194559 gctgctctatttatagcctaaaactgacttaagccctaagaaatcaatcactagaaggttccacaag 3194625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 33609762 - 33609629
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||  ||||||||||||||     |||| | |||| || || ||||||||| ||| | | | ||||||||| ||| |||||||    
T  33609762 caattgtcacttattatttcagagaacaaaagatgaattgttatgatagctatctactttatttatagtctatatcga-cttaagccctaagcaatacat 33609664  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||| |||||||||||||||||||    
T  33609663 cactagaatgttccaaaagaaaccatgtgctttta 33609629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 4460805 - 4460931
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||  ||| | | | | |  ||||||||||||||| |||| | | |||| ||||| ||||| || ||    
T  4460805 caattgtcacttattatttccaagaacaaaagatgattatacaagctagatgactgctctatttatagtctaacattgacttgagccctaagaactaaat 4460904  T
Q  205 caatagaatgttccacaagaaaccatg 231  Q
    || || | |||| ||||||||||||||    
T  4460905 cactaaagtgttgcacaagaaaccatg 4460931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 5826053 - 5825968
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| ||||||||||||  || || | |||||||||| |||||||| | || |||||||||||||||||||||||| |||||||    
T  5826053 gctagctactctatttatagtttacaa-tgacttaagccctaagaaatataacactagaatgttccacaagaaaccatgggctttta 5825968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 41722750 - 41722686
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctattta 169  Q
    |||||||||||||| |||||||||||||||||||||  || | || | ||||||| |||||||||    
T  41722750 caattgtcacttattatttccaagaacaaaagatgaatatttgtgatggctagctactctattta 41722686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 48355627 - 48355694
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| ||||| |||||||||||||||  || | || | ||||||| ||||||||||||    
T  48355627 caattgtcacttattatttcaaagaacaaaagatgaatatttgtgatggctagctactctatttatag 48355694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 4465884 - 4465926
Alignment:
Q  195 agaaatacatcaatagaatgttccacaagaaaccatgtgcttt 237  Q
    |||||||||||||||||||||||| | |||||||||| |||||    
T  4465884 agaaatacatcaatagaatgttcctcgagaaaccatgggcttt 4465926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 9264426 - 9264460
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatg 139  Q
    |||||||||||||| ||||||||||||||||||||    
T  9264426 caattgtcacttattatttccaagaacaaaagatg 9264460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 16897355 - 16897440
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| ||||||||||||  || || | |||||||||| |||||||| | |  |||||||||||||||||||||| | |||||||    
T  16897355 gctagctactctatttatagtttacaa-tgacttaagccctaagaaatataacgctagaatgttccacaagaaaccaagggctttta 16897440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 48713433 - 48713392
Alignment:
Q  198 aatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||||| || ||||||||||||||||||||| |||||||    
T  48713433 aatacatcactataatgttccacaagaaaccatgggctttta 48713392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 6e-81; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 112 - 395
Target Start/End: Original strand, 23793645 - 23793917
Alignment:
Q  112 cacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaataga 211  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23793645 cacttataatttccaagaacaaaagatgagaatatatgtttgttagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaataga 23793744  T
Q  212 atgttccacaagaaaccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttccagtcgca 311  Q
    |||||||||||||||||||| |||||  ||  ||||||||||||||| ||| ||  |||||| |||         ||||||||||||||| ||||||||     
T  23793745 atgttccacaagaaaccatgggcttt--taggtcaaaattacactaaaaagacagttggatcagga---------agcaaaaggaaagctgccagtcgcg 23793833  T
Q  312 cacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacgggttgtgt 395  Q
    |||  |||||||||| || ||||||| |||| |||||| ||||||||||| |||||||||||||||| ||||||| ||||||||    
T  23793834 caccgccgtgtggctggaggcacgggtcgtgtgctcctttctggttgttgtccttctttgaaactttacaggcacaggttgtgt 23793917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 5513682 - 5513814
Alignment:
Q  105 caattgtcacttat-aatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaataca 203  Q
    |||||||||||||| ||||| ||||||||||||||||    |||||||| ||||||||| ||||||||| ||||||||| ||||||||||||||| ||||    
T  5513682 caattgtcacttattaatttacaagaacaaaagatgattgaatatgttttctagctgctttatttatagtctaaaacta-cttaagccccaagaattaca 5513780  T
Q  204 tcaatagaatgttccacaagaaaccatgtgcttt 237  Q
    |||||||||||||||| ||||||||||| |||||    
T  5513781 tcaatagaatgttccataagaaaccatgggcttt 5513814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 5675499 - 5675371
Alignment:
Q  108 ttgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaa 207  Q
    |||||||||||||||||  ||||||||||||||    ||||||||||||||| |||||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  5675499 ttgtcacttataatttcagagaacaaaagatgattcaatatgtttgctagcttctctatttatagtctacaacta-cttaaaccccaagaaatacatcaa 5675401  T
Q  208 tagaatgttccacaagaaaccatgtgcttt 237  Q
    |||||||||||||||||||| ||| |||||    
T  5675400 tagaatgttccacaagaaactatgggcttt 5675371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 9487086 - 9487206
Alignment:
Q  106 aattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatc 205  Q
    |||||||||||| ||||  ||||||||||||||||    |||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  9487086 aattgtcacttagaattctcaagaacaaaagatgaatgaatatgtttgctacctgctctatttatagtctacaacta-cttaagccccaagaaatacatc 9487184  T
Q  206 aatagaatgttccacaagaaac 227  Q
    |||||| |||||||||||||||    
T  9487185 aatagagtgttccacaagaaac 9487206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 106 - 237
Target Start/End: Original strand, 33331042 - 33331172
Alignment:
Q  106 aattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatc 205  Q
    |||||||||||||||||||  ||||||| ||||||    ||||||||||||||| ||||||||||||  || ||||| ||||||||||||||||||||||    
T  33331042 aattgtcacttataatttcagagaacaatagatgatttgatatgtttgctagctactctatttatagtttacaacta-cttaagccccaagaaatacatc 33331140  T
Q  206 aatagaatgttccacaagaaaccatgtgcttt 237  Q
    | |||||||||||||||||||| ||| |||||    
T  33331141 agtagaatgttccacaagaaactatgggcttt 33331172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 11922491 - 11922615
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||| || |  ||| | ||||| | ||| ||||||||||||||||| | | |||||||||| |||||||| ||    
T  11922491 caattgtcacttattatttccaagaacaaaatattaatatacaagtttgatggctactctatttatagcctaacaatgacttaagccctaagaaatagat 11922590  T
Q  205 caatagaatgttccacaagaaacca 229  Q
    || || | |||| ||||||||||||    
T  11922591 cactaaagtgttgcacaagaaacca 11922615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 12345992 - 12346124
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  ||| |||||||||||| |||||| |||||| ||||| | |||||||||||||||||| || | | | |||||||| |||||||| ||    
T  12345992 caattgtcactattaaattccaagaacaagagatgaaaatataagtttgatggctgctctatttatagccaaatattgatttaagccctaagaaataaat 12346091  T
Q  205 caatagaatgttccacaagaaaccatgtgcttt 237  Q
     | || | |||| |||||||||||||| |||||    
T  12346092 tactacagtgttacacaagaaaccatgggcttt 12346124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 31593941 - 31593808
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| ||||| |||||||||||||||     |||| | ||||| | |||||||||||| ||| ||| | |||||  || ||| |||||||    
T  31593941 caattgtcacttattatttcaaagaacaaaagatgaattgttatgatagctagttactctatttatagtctataacga-cttaaaacctaagcaatacat 31593843  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||||||||||||| | |||||||    
T  31593842 cactagaatgttccacaagaaaccaagggctttta 31593808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 11889013 - 11889080
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| |||||||||||||||||||||  || | || | ||||||| ||||||||||||    
T  11889013 caattgtcacttattatttccaagaacaaaagatgaatatttgtgatggctagctactctatttatag 11889080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 11902658 - 11902693
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatga 140  Q
    |||||||||||||| |||||||||||||||||||||    
T  11902658 caattgtcacttattatttccaagaacaaaagatga 11902693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 10731153 - 10731068
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| ||||||||||||  || || | ||||||  || ||| ||||||||| ||||||||||||||||||| |||| |||||||    
T  10731153 gctagctactctatttatagtttacaa-tgacttaaaacctaagcaatacatcattagaatgttccacaagaaatcatgggctttta 10731068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 10944922 - 10944837
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| ||||||||||||  || || | ||||||  || ||| ||||||||| ||||||||||||||||||| |||| |||||||    
T  10944922 gctagctactctatttatagtttacaa-tgacttaaaacctaagcaatacatcattagaatgttccacaagaaatcatgggctttta 10944837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 12506587 - 12506629
Alignment:
Q  157 gctgctctatttatagcctaaaactaacttaagccccaagaaa 199  Q
    |||||||||||||||||||||  ||||||||||||| ||||||    
T  12506587 gctgctctatttatagcctaatgctaacttaagcccaaagaaa 12506629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 12347401 - 12347309
Alignment:
Q  108 ttgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaa-ctaacttaagccccaagaaa 199  Q
    ||||||| || ||||  |||||||| |||||||  ||| | || || | ||||||||||||||| ||||||| ||||||||||||| ||||||    
T  12347401 ttgtcacataaaattcacaagaacacaagatgaatataaaggtctggtggctgctctatttatatcctaaaagctaacttaagccctaagaaa 12347309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 5e-72; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 105 - 387
Target Start/End: Original strand, 24371481 - 24371763
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagcccc-aagaaataca 203  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||    
T  24371481 caattgtcacttataaattccaagaacaaaagatgaaaatatatgtttgctagatgctctatttatagtctaaaactaacttaagccccaaagaaataca 24371580  T
Q  204 tcaatagaatgttccacaagaaaccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcag-caaaaggaaagctt 302  Q
    ||||||||||||||||||||||||||||  ||||  ||  ||| | ||||||||| |||||||||||||| ||||||| ||||||  ||||||||||||     
T  24371581 tcaatagaatgttccacaagaaaccatggacttt--taggtcagagttacactaaaaaggcatctggatcaggaagcaaaagcagtaaaaaggaaagctg 24371678  T
Q  303 ccagtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacg 387  Q
    ||||| || |||| ||||||  || || ||||||| |||||   ||||||||||||||||||||| || |||| ||| |||||||    
T  24371679 ccagttgcgcacgtccgtgtcactggaggcacgggtcgtgccaacctctctggttgttggccttccttcaaacattggaggcacg 24371763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 105 - 237
Target Start/End: Complemental strand, 20852168 - 20852037
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| ||||| ||||||||||||||| |  ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  20852168 caattgtcacttattatttcgaagaacaaaagatgatacaatatgtttgctcgctgctctatttatagcctataacta-cttaagccccaagaaatacat 20852070  T
Q  205 caatagaatgttccacaagaaaccatgtgcttt 237  Q
    ||||||||||||||||||||||||||| |||||    
T  20852069 caatagaatgttccacaagaaaccatgggcttt 20852037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 19124374 - 19124505
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||| || |||||||||||||    ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| |||    
T  19124374 caattgtcacttattattttcatgaacaaaagatgaatgaatatgtttgctagctactctatttatagtctaaaacta-cttaagccccaagaaatgcat 19124472  T
Q  205 caatagaatgttccacaagaaaccatgtgcttt 237  Q
    |||||||||||| |||||||||||||| |||||    
T  19124473 caatagaatgtttcacaagaaaccatgggcttt 19124505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 105 - 237
Target Start/End: Complemental strand, 24321843 - 24321711
Alignment:
Q  105 caattgtcacttat-aatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaataca 203  Q
    |||||||||||||| ||||||||||||||||||||||    |||||||||| || |||||||||||||| ||| ||||| ||||| |||||| |||||||    
T  24321843 caattgtcacttattaatttccaagaacaaaagatgattgaatatgtttgccaggtgctctatttatagtctacaacta-cttaaaccccaacaaataca 24321745  T
Q  204 tcaatagaatgttccacaagaaaccatgtgcttt 237  Q
    |||||||||| ||||||||||||||||| |||||    
T  24321744 tcaatagaatattccacaagaaaccatgggcttt 24321711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 19013084 - 19013193
Alignment:
Q  122 ttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaata-gaatgttccac 220  Q
    |||||||||||||||||||    ||||||||| |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  19013084 ttccaagaacaaaagatgattgaatatgtttgttagctgctctatttatagtctacaacta-cttaagccccaagaaatacatcaataggaatgttccac 19013182  T
Q  221 aagaaaccatg 231  Q
    |||||||||||    
T  19013183 aagaaaccatg 19013193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 23257053 - 23257178
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  ||| |||||||||||| ||||||    ||||||||||||||| ||||||||||||  || ||||| |||||||| ||||||||||||    
T  23257053 caattgtcactattaaattccaagaacaagagatgattcaatatgtttgctagctactctatttatagtttacaacta-cttaagccacaagaaatacat 23257151  T
Q  205 caatagaatgttccacaagaaaccatg 231  Q
    |||||||||||||||||||||||||||    
T  23257152 caatagaatgttccacaagaaaccatg 23257178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 15583853 - 15583724
Alignment:
Q  108 ttgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaa 207  Q
    ||||||||||| ||||||||||||||||||||| |||| | ||||| | |||||||||||||||| |||| | | |||||| ||| |||||||| ||||     
T  15583853 ttgtcacttattatttccaagaacaaaagatgagaatacaagtttggtcgctgctctatttatagtctaacaatgacttaaaccctaagaaataaatcac 15583754  T
Q  208 tagaatgttccacaagaaaccatgtgcttt 237  Q
    |  | |||| |||||||||||||| |||||    
T  15583753 tgaagtgttgcacaagaaaccatgggcttt 15583724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 20282099 - 20281966
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||     | || | || |||| |||||||||||| ||| | | | ||||| ||| ||| |||||||    
T  20282099 caattgtcacttattatttccaagaacaaaagatgaattgttgtgatagccagctactctatttatagtctatatcga-cttaaaccctaagcaatacat 20282001  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||||||||||||| | |||||||    
T  20282000 cactagaatgttccacaagaaaccaagggctttta 20281966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 22578402 - 22578493
Alignment:
Q  108 ttgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaa-ctaacttaagccccaagaaa 199  Q
    ||||||| || ||||||||| ||||||||||||  | ||| || || | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  22578402 ttgtcacataaaatttccaaaaacaaaagatgaata-ataagtctggtggctgctctatttatagcctaaaagctaacttaagccctaagaaa 22578493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 21503 - 21574
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaa 225  Q
    ||||||| |||||||||||| ||| || | |||||||||| |||||||| | || ||||||||||||||||||    
T  21503 gctagctactctatttatagtctacaa-tgacttaagccctaagaaatataacactagaatgttccacaagaa 21574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 23698926 - 23698982
Alignment:
Q  183 acttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    |||||||||| ||||||||||||| ||||||||| || ||||| ||||| |||||||    
T  23698926 acttaagccctaagaaatacatcactagaatgtttcataagaagccatgggctttta 23698982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 41653698 - 41653773
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaacca 229  Q
    ||||||| ||||||||||||  || || | |||||||||| |||||||| | || ||||||||||||||||||||||    
T  41653698 gctagctactctatttatagtttacaa-tgacttaagccctaagaaatataacactagaatgttccacaagaaacca 41653773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 11391154 - 11391048
Alignment:
Q  122 ttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccaca 221  Q
    |||||||||||||||||||     |||| | | ||||| |||||||||||| ||| ||| | |||||  || ||| ||||||||| ||||||||||||||    
T  11391154 ttccaagaacaaaagatgaattgttatgatagttagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccaca 11391056  T
Q  222 agaaacca 229  Q
    ||||||||    
T  11391055 agaaacca 11391048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 11407815 - 11407709
Alignment:
Q  122 ttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccaca 221  Q
    |||||||||||||||||||     |||| | | ||||| |||||||||||| ||| ||| | |||||  || ||| ||||||||| ||||||||||||||    
T  11407815 ttccaagaacaaaagatgaattgttatgatagttagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccaca 11407717  T
Q  222 agaaacca 229  Q
    ||||||||    
T  11407716 agaaacca 11407709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 23340628 - 23340593
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatga 140  Q
    |||||||||||||| |||||||||||||||||||||    
T  23340628 caattgtcacttattatttccaagaacaaaagatga 23340593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 16134233 - 16134299
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttata 171  Q
    |||||||||||||| ||||| |||||||||||||||  || | || | ||||||| |||||||||||    
T  16134233 caattgtcacttattatttcaaagaacaaaagatgaatatttgtgatggctagctactctatttata 16134299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 21344582 - 21344647
Alignment:
Q  161 ctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaac 227  Q
    |||||||||||| ||| || | |||||||||| |||||||| | || ||||||||||||||||||||    
T  21344582 ctctatttatagtctacaa-tgacttaagccctaagaaatataacactagaatgttccacaagaaac 21344647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 32441433 - 32441518
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| |||||||||||| ||| ||| | |||||  || ||| ||||||||| ||||||||||||||| |||||| | |||||||    
T  32441433 gctagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccacaaaaaaccaagggctttta 32441518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 24366389 - 24366462
Alignment:
Q  158 ctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatg 231  Q
    ||||||||||||||| |||| | | |||| ||||||||||| || |||| || | |||| ||||||||||||||    
T  24366389 ctgctctatttatagtctaacattgacttgagccccaagaattaaatcactaaattgttgcacaagaaaccatg 24366462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 24369112 - 24369185
Alignment:
Q  158 ctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatg 231  Q
    ||||||||||||||| |||| | | |||| ||||||||||| || |||| || | |||| ||||||||||||||    
T  24369112 ctgctctatttatagtctaacattgacttgagccccaagaattaaatcattaaattgttgcacaagaaaccatg 24369185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 15027438 - 15027402
Alignment:
Q  157 gctgctctatttatagcctaaaa-ctaacttaagccc 192  Q
    ||||||||||||||||||||||| |||||||||||||    
T  15027438 gctgctctatttatagcctaaaagctaacttaagccc 15027402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 105 - 295
Target Start/End: Complemental strand, 3513 - 3325
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3513 caattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacat 3414  T
Q  205 caatagaatgttccacaagaaaccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaagg 295  Q
    ||||||||||||||||||||||||||| |||||  ||  ||| ||||||||| | |||||| || |||| ||||||| |||||||||||||    
T  3413 caatagaatgttccacaagaaaccatgagcttt--taggtcagaattacacttaaaaggcagctagatcaggaagcaaaagcagcaaaagg 3325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 105 - 295
Target Start/End: Complemental strand, 3678 - 3490
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3678 caattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacat 3579  T
Q  205 caatagaatgttccacaagaaaccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaagg 295  Q
    ||||||||||||||||||||||||||| |||||  ||  ||| ||||||||| | |||||| || |||| ||||||| |||||||||||||    
T  3578 caatagaatgttccacaagaaaccatgagcttt--taggtcagaattacacttaaaaggcagctagatcaggaagcaaaagcagcaaaagg 3490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 4e-60; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 106 - 396
Target Start/End: Original strand, 24221594 - 24221882
Alignment:
Q  106 aattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatc 205  Q
    |||||||||||| ||||||||||||||||| ||||   |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  24221594 aattgtcacttagaatttccaagaacaaaaaatgattgtatatgtttgctagttgctctatttatagtctaaaactaacttaagccctaagaaatccatc 24221693  T
Q  206 aatagaatgttccacaagaaaccatgtgcttttatatatcaaaattacact-aagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttcc 304  Q
    |||||||||||||||||||||||||| ||||   ||  ||| || || ||| || |||||| || |||| ||||||| |||||||||| |||  |||  |    
T  24221694 aatagaatgttccacaagaaaccatgggctt---taggtcagaaataaactaaaaaaggcagcttgatcaggaagcaaaagcagcaaacggagtgctgtc 24221790  T
Q  305 agtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacgggttgtgtg 396  Q
    ||| ||||||| ||||||| || ||  ||||||||||  |||||| ||||||  ||||| |||||||||||||||||| |||||||||||||    
T  24221791 agttgcacacggccgtgtgtctggagacacgggccgtatgctcctatctggtctttggctttctttgaaactttgcagacacgggttgtgtg 24221882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 22904644 - 22904520
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    ||||||||||||||||||||||||||||||||||||    |||||||||||||||||| ||||||||||||| ||||| ||| |||||||| ||||||||    
T  22904644 caattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataacta-ctttagccccaataaatacat 22904547  T
Q  205 caatagaatgttccacaagaaaccatg 231  Q
    |||||||||||||||||||||| ||||    
T  22904546 caatagaatgttccacaagaaatcatg 22904520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 230
Target Start/End: Complemental strand, 24342104 - 24341979
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| ||||| |||||||||||||||  ||| | | ||| |  |||||||||||||||||||| | | |||||||||| |||||||| ||    
T  24342104 caattgtcacttattatttctaagaacaaaagatgattatacaagcttgatgactgctctatttatagcctaacattgacttaagccctaagaaataaat 24342005  T
Q  205 caatagaatgttccacaagaaaccat 230  Q
    || || | |||| ||||||| |||||    
T  24342004 cactaaagtgttgcacaagacaccat 24341979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 239
Target Start/End: Original strand, 14162190 - 14162323
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||  ||||||||||||||     | ||  |||||||| ||||||||||||  || || | ||||||| || |||||||| ||    
T  14162190 caattgtcacttattatttcagagaacaaaagatgatttgttgtgactgctagctactctatttatagtttacaa-tgacttaagacctaagaaatatat 14162288  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||||||||||||||| |||||||    
T  14162289 cactagaatgttccacaagaaaccatgggctttta 14162323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 18008143 - 18008056
Alignment:
Q  151 ttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat--caatagaatgttccacaagaaaccatgtgcttt 237  Q
    ||||||||| |||||||||||| ||| ||| |||||||||||||||| ||| ||  ||||||||||||||||||| ||||||| |||||    
T  18008143 ttgctagctactctatttatagtctacaac-aacttaagccccaagatatatatatcaatagaatgttccacaaggaaccatgggcttt 18008056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 226
Target Start/End: Original strand, 19792272 - 19792393
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||| ||||||||  ||| | | ||| |  ||||||||||||||| |||| | | |||||||||| |||||||| ||    
T  19792272 caattgtcacttattatttccaagaactaaagatgattatacaagcttgatgtctgctctatttatagtctaacaatgacttaagccctaagaaataaat 19792371  T
Q  205 caatagaatgttccacaagaaa 226  Q
    || || | |||| |||||||||    
T  19792372 cactaaagtgttgcacaagaaa 19792393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 239
Target Start/End: Original strand, 23221549 - 23221682
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||| |||||| |||||||||     |||| | | ||||| ||||||||||||  || | | | ||||||||  ||| |||||||    
T  23221549 caattgtcacttattattttcaagaagaaaagatgaattgttatgatagttagctactctatttatagtttatatcga-cttaagccataagcaatacat 23221647  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||||| ||||||||| |||||||    
T  23221648 cactagaatgttccacatgaaaccatgggctttta 23221682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 7465513 - 7465556
Alignment:
Q  157 gctgctctatttatagcctaaaa-ctaacttaagccccaagaaa 199  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  7465513 gctgctctatttatagcctaaaagctaacttaagccctaagaaa 7465556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 25396982 - 25396947
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatga 140  Q
    |||||||||||||| |||||||||||||||||||||    
T  25396982 caattgtcacttattatttccaagaacaaaagatga 25396947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 26013027 - 26012992
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatga 140  Q
    |||||||||||||| |||||||||||||||||||||    
T  26013027 caattgtcacttattatttccaagaacaaaagatga 26012992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 21139620 - 21139587
Alignment:
Q  198 aatacatcaatagaatgttccacaagaaaccatg 231  Q
    ||||||||| ||||||||||||||||||||||||    
T  21139620 aatacatcactagaatgttccacaagaaaccatg 21139587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 7e-59; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 23029627 - 23029811
Alignment:
Q  111 tcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatag 210  Q
    ||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23029627 tcacttataatttccaagaacaaaagatgaatagatatgtctgctagctgctctatttatagcctaaaactaacataagccccaagaaatacatcaatag 23029726  T
Q  211 aatgttccacaagaaa-ccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaagga 296  Q
    |||||||||||||||| ||||  |||||  ||  ||||||||||||||| |||||| ||||||| ||||||| ||||||||||||||    
T  23029727 aatgttccacaagaaacccataggcttt--taggtcaaaattacactaaaaaggcagctggatcaggaagcaaaagcagcaaaagga 23029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 105 - 296
Target Start/End: Complemental strand, 24166305 - 24166117
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24166305 caattgtcacttatcatttccaagaacaaaagatgaaaatatatgtttcctagctgctctatttatagcataaaactaacttaagccccaagaaatacat 24166206  T
Q  205 caatagaatgttccacaagaaaccatgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaagga 296  Q
    |||||||||||| ||||||||||| |  ||||   ||| |||||| || ||||| |||||| || |||| ||||||| ||||||||||||||    
T  24166205 caatagaatgttgcacaagaaaccgtaggctt---tatgtcaaaaataaactaaaaaggcagcttgatcaggaagcaaaagcagcaaaagga 24166117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 237
Target Start/End: Complemental strand, 22170832 - 22170701
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  |||||||  | ||||||||||||    ||||| |||||||||||| ||||||||| ||| ||||| |||||||| ||||||||||||    
T  22170832 caattgtcactattaatttcagataacaaaagatgaatgaatatgattgctagctgctttatttatagtctacaacta-cttaagcctcaagaaatacat 22170734  T
Q  205 caatagaatgttccacaagaaaccatgtgcttt 237  Q
     ||||||||||| |||||||||| ||| |||||    
T  22170733 taatagaatgtttcacaagaaactatgggcttt 22170701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 12410556 - 12410442
Alignment:
Q  122 ttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccaca 221  Q
    |||||||||||||||||||     |||| ||||||||| ||||||||||||  || || | |||||||||| |||||||| |||| ||||||||||||||    
T  12410556 ttccaagaacaaaagatgaattgttatgattgctagctactctatttatagtttacaa-tgacttaagccctaagaaataaatcactagaatgttccaca 12410458  T
Q  222 agaaaccatgtgcttt 237  Q
    |||||||||| |||||    
T  12410457 agaaaccatgggcttt 12410442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 237
Target Start/End: Complemental strand, 16677127 - 16676995
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  |||||||  |||| |||||||||  ||| | | ||| | ||||||||||||||||||||| | | |||||||||| |||||||| ||    
T  16677127 caattgtcactattaatttcagagaagaaaagatgattatacaagcttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaat 16677028  T
Q  205 caatagaatgttccacaagaaaccatgtgcttt 237  Q
    || |  | |||| ||||||||| |||| |||||    
T  16677027 cactgaagtgttgcacaagaaatcatgggcttt 16676995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 23110846 - 23110769
Alignment:
Q  140 acaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttcca 219  Q
    |||| |||||| || | ||| |||||||||||||||||  ||||||||||||| |||||||| |||| ||||||||||||    
T  23110846 acaagatatgtctggtggcttctctatttatagcctaa--ctaacttaagccctaagaaataaatcactagaatgttcca 23110769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 20915993 - 20916059
Alignment:
Q  106 aattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    ||||||||||||| |||||||||||||||||||||  || | || | ||||||| ||||||||||||    
T  20915993 aattgtcacttattatttccaagaacaaaagatgaatatttgtgatggctagctactctatttatag 20916059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 34223246 - 34223300
Alignment:
Q  185 ttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||| || ||| ||||||||| |||||||||||||||||||||||| |||||||    
T  34223246 ttaagacctaagcaatacatcactagaatgttccacaagaaaccatgggctttta 34223300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 24214790 - 24214722
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagc 173  Q
    |||||||||||||| |||||| |||||||||||| |  || |||| | ||||||| |||||||||||||    
T  24214790 caattgtcacttattatttccgagaacaaaagataaatatttatgatggctagctactctatttatagc 24214722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 22942405 - 22942370
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatga 140  Q
    |||||||||||||| |||||||||||||||||||||    
T  22942405 caattgtcacttattatttccaagaacaaaagatga 22942370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 20738346 - 20738268
Alignment:
Q  157 gctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgct 235  Q
    |||||| ||||||||| |||| | | |||| ||||||||||| || |||| || | |||| ||||||||||||||||||    
T  20738346 gctgctttatttatagtctaacattgacttgagccccaagaattaaatcactaaagtgttgcacaagaaaccatgtgct 20738268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 106 - 239
Target Start/End: Complemental strand, 168240 - 168107
Alignment:
Q  106 aattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatc 205  Q
    |||||||||||| ||||||||||||||||||||||  | |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  168240 aattgtcacttagaatttccaagaacaaaagatgattagatatgtctgctagctgctct-tttatagcctaaaactaacttaagcccaaagaaatacatc 168142  T
Q  206 aatagaatgttccacaagaaac-catgtgctttta 239  Q
    |||||||||||||||||||||| |||| |||||||    
T  168141 aatagaatgttccacaagaaactcatgggctttta 168107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 20860790 - 20860921
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  |||||||||||||||| ||||||   ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  20860790 caattgtcactattaatttccaagaacaagagatgattgtatatgtttgctagctgctctatttatagtctacaacta-cttaagccccaagaaatacat 20860888  T
Q  205 caatagaatgttccacaagaaaccatgtgcttt 237  Q
    |||| |||||||||||||||||||||| |||||    
T  20860889 caatggaatgttccacaagaaaccatgggcttt 20860921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 20899437 - 20899562
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||    |||||||| ||||||  ||||||||||| ||| ||||| |||||||||||||||||||||    
T  20899437 caattgtcacttattatttccaagaacaaaagatgaatgaatatgttttctagctattctatttatagtctacaacta-cttaagccccaagaaatacat 20899535  T
Q  205 caatagaatgttccacaagaaaccatg 231  Q
     |||||||||||| ||| |||||||||    
T  20899536 aaatagaatgttctacaggaaaccatg 20899562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 118 - 237
Target Start/End: Complemental strand, 23298924 - 23298806
Alignment:
Q  118 taatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttc 217  Q
    ||||||| |||||||||||||||    ||||||||||||||| |||||||||||| |||  || |||||||||||||||||||||||||||| |||||||    
T  23298924 taatttcaaagaacaaaagatgattcaatatgtttgctagctactctatttatagtctacgac-aacttaagccccaagaaatacatcaataaaatgttc 23298826  T
Q  218 cacaagaaaccatgtgcttt 237  Q
    ||||| |||||||| |||||    
T  23298825 cacaaaaaaccatgggcttt 23298806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 26194291 - 26194180
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  |||||||||||||||||||||||    ||||||||||||| |||||||||||||| ||| |||| ||||||| || |||||||||||    
T  26194291 caattgtcactattaatttccaagaacaaaagatgattcaatatgtttgctagttgctctatttatagtctataact-acttaagtccgaagaaatacat 26194193  T
Q  205 caatagaatgttc 217  Q
     ||||||||||||    
T  26194192 taatagaatgttc 26194180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 239
Target Start/End: Original strand, 13799493 - 13799626
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||  ||||||||||||||     | ||| |||||||| ||||||||||||  || || | ||||||| || |||||||| ||    
T  13799493 caattgtcacttattatttcagagaacaaaagatgatttgttgtgtctgctagctactctatttatagtttacaa-tgacttaagacctaagaaatatat 13799591  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||||||||||||||| |||||||    
T  13799592 cactagaatgttccacaagaaaccatgggctttta 13799626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 16384993 - 16385115
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||||||||| |||||||||||| ||  ||| | | ||| | |||||||||||||||| |||| | | |||||||||| | |||||| ||    
T  16384993 caattgtcacttataatttcaaagaacaaaagacgattatacaaggttgatggctgctctatttatagtctaacattgacttaagccctacgaaataaat 16385092  T
Q  205 caatagaatgttccacaagaaac 227  Q
    || |||| |||| ||||||||||    
T  16385093 cactagagtgttacacaagaaac 16385115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 219
Target Start/End: Original strand, 15347023 - 15347136
Alignment:
Q  106 aattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatc 205  Q
    |||||||||  | |||| |||||||||||||||||  | |||||| || |  |||||||||||||||||||||||| ||||||| || ||||| || |||    
T  15347023 aattgtcacaaagaattcccaagaacaaaagatgatgagatatgtctggtgactgctctatttatagcctaaaactgacttaagtcctaagaagtaaatc 15347122  T
Q  206 aatagaatgttcca 219  Q
    | || |||||||||    
T  15347123 actataatgttcca 15347136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 25405124 - 25405184
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctcta 165  Q
    |||||||||||||| |||||||||||||||||||||| ||| | ||||| | |||||||||    
T  25405124 caattgtcacttattatttccaagaacaaaagatgactatacaagtttgatggctgctcta 25405184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 16148490 - 16148614
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  ||| |||  ||||||||||||||  ||| | | ||| | |||||||||||||||| |||| | | |||||||||| |||||||| ||    
T  16148490 caattgtcactattaaattcagagaacaaaagatgattatacaagcttgatggctgctctatttatagtctaacattgacttaagccctaagaaataaat 16148589  T
Q  205 caatagaatgttccacaagaaacca 229  Q
    || || | | || ||||||||||||    
T  16148590 cactaaagtattgcacaagaaacca 16148614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 2386269 - 2386202
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| |||||| ||||||||||||||  || | || | ||||||| ||||||||||||    
T  2386269 caattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatag 2386202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 20412312 - 20412277
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatga 140  Q
    |||||||||||||| |||||||||||||||||||||    
T  20412312 caattgtcacttattatttccaagaacaaaagatga 20412277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 8648859 - 8648785
Alignment:
Q  157 gctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatg 231  Q
    |||||||||||||||| |||| | | |||| ||||||||||| || |||| || | |||| ||||||||||||||    
T  8648859 gctgctctatttatagtctaacattgacttgagccccaagaattaaatcactaaattgttgcacaagaaaccatg 8648785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 17716751 - 17716666
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| |||||||||||| ||| ||| |||||||  || ||| ||||||||| ||||||| |||||||||| ||| | |||||||    
T  17716751 gctagctactctatttatagtctataac-aacttaaaacctaagcaatacatcactagaatggtccacaagaagccaagggctttta 17716666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 30819162 - 30819236
Alignment:
Q  157 gctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatg 231  Q
    |||||||||||||||| |||| | | | || ||||||||||| || |||| || |||||| ||||||||||||||    
T  30819162 gctgctctatttatagtctaacattgatttgagccccaagaattaaatcactaaaatgttgcacaagaaaccatg 30819236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 48256311 - 48256226
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| |||||||||||| ||| ||| | |||||  || ||| ||||||||| |||||||||||| ||||||||| | |||||||    
T  48256311 gctagctactctatttatagtctataacga-cttaaaacctaagtaatacatcactagaatgttccataagaaaccaagggctttta 48256226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 52235908 - 52236025
Alignment:
Q  122 ttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaaga-aatacatcaatagaatgttccac 220  Q
    |||||||||||||||||||     |||| | ||||||| |||||||||||| ||| ||| | |||||  || |||  ||||||||| |||||||||||||    
T  52235908 ttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtctataacga-cttaaaacctaagctaatacatcactagaatgttccac 52236006  T
Q  221 aagaaaccatgtgctttta 239  Q
    ||||||||| | |||||||    
T  52236007 aagaaaccaagagctttta 52236025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 17986617 - 17986584
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagat 138  Q
    |||||||||||||| |||||||||||||||||||    
T  17986617 caattgtcacttattatttccaagaacaaaagat 17986584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 16431567 - 16431492
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaacca 229  Q
    ||||||| |||||||||||| ||| | | | |||||  || ||| ||||||||| ||||||||||||||||||||||    
T  16431567 gctagctactctatttatagtctatatcga-cttaaaacctaagcaatacatcactagaatgttccacaagaaacca 16431492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 20412213 - 20412181
Alignment:
Q  198 aatacatcaatagaatgttccacaagaaaccat 230  Q
    ||||||||| |||||||||||||||||||||||    
T  20412213 aatacatcactagaatgttccacaagaaaccat 20412181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 41545798 - 41545918
Alignment:
Q  108 ttgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaa 207  Q
    |||||||||||||||||||||||||||||||||    ||||||||||||| | |||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  41545798 ttgtcacttataatttccaagaacaaaagatgattcaatatgtttgctaggtactctatttatagtctacaacta-cttaagccccaagaaatacatcaa 41545896  T
Q  208 tagaatgttccacaagaaacca 229  Q
    || |||||||||||||||||||    
T  41545897 taaaatgttccacaagaaacca 41545918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 8685889 - 8686012
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||    |||||||| |||||| |||||||||||| ||| ||||| |||||||||||||||||||||    
T  8685889 caattgtcacttattatttccaagaacaaaagatgattcaatatgttttctagctactctatttatagtctacaacta-cttaagccccaagaaatacat 8685987  T
Q  205 caatagaatgttccacaagaaacca 229  Q
    ||||| |||||||||||||||||||    
T  8685988 caataaaatgttccacaagaaacca 8686012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 11869878 - 11870009
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||    ||||| ||||||||| |||||||||||| ||| ||||| ||||||||||| |||||||||    
T  11869878 caattgtcacttattatttccaagaacaaaagatgattcaatatgcttgctagctactctatttatagtctacaacta-cttaagccccaggaaatacat 11869976  T
Q  205 caatagaatgttccacaagaaaccatgtgcttt 237  Q
    ||||||||||||||||||||||| ||| |||||    
T  11869977 caatagaatgttccacaagaaactatgggcttt 11870009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 105 - 237
Target Start/End: Complemental strand, 16703840 - 16703708
Alignment:
Q  105 caattgtcacttat-aatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaataca 203  Q
    |||||||||||||| ||||||||| ||||| ||||||    || ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  16703840 caattgtcacttattaatttccaaaaacaagagatgattcaatttgtttgctagctgctctatttatagtctataacta-cttaagccccaagaaataca 16703742  T
Q  204 tcaatagaatgttccacaagaaaccatgtgcttt 237  Q
    |||||||||| ||||||||||||| ||| |||||    
T  16703741 tcaatagaattttccacaagaaactatgggcttt 16703708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 8531897 - 8531806
Alignment:
Q  145 atatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgcttt 237  Q
    ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  8531897 atatgtttgctagctactctatttatagtctataacta-cttaagccccaagaaatacatcaatagaatgttccacaagaaagcatgggcttt 8531806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 239
Target Start/End: Original strand, 42244590 - 42244723
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||  ||||||||||||||     | ||  |||||||| ||||||||||||  || || | ||||||| || |||||||| ||    
T  42244590 caattgtcacttattatttcagagaacaaaagatgatttgttgtggctgctagctactctatttatagtttacaa-tgacttaagacctaagaaatatat 42244688  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||||||||||||||| |||||||    
T  42244689 cactagaatgttccacaagaaaccatgggctttta 42244723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 27992765 - 27992858
Alignment:
Q  106 aattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaa 199  Q
    ||||||||| || |||| |||||||||||||||||  | |||||| || | ||| |||||||||||||||||| ||| ||||||||| ||||||    
T  27992765 aattgtcacataaaattcccaagaacaaaagatgaagagatatgtctggtggctactctatttatagcctaaagctagcttaagccctaagaaa 27992858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 17041780 - 17041647
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatata-tgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaataca 203  Q
    |||||||||||||| ||||| ||||||||||||||| | | || || | ||||||| ||||||||||||  || || | |||||||||| |||||||| |    
T  17041780 caattgtcacttattatttcgaagaacaaaagatga-attgtagtgatagctagctactctatttatagtttacaa-tgacttaagccctaagaaatata 17041683  T
Q  204 tcaatagaatgttccacaagaaaccatgtgctttta 239  Q
      | |||||||||||||||||||||| | |||||||    
T  17041682 agagtagaatgttccacaagaaaccacgggctttta 17041647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 13069818 - 13069692
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| |||||||||||||||||||||   || | | | | | |||||||| ||||||| |||| | | |||| ||||||||||| || ||    
T  13069818 caattgtcacttattatttccaagaacaaaagatgattttacaagctagatggctgctctttttatagtctaacattgacttgagccccaagaattaaat 13069719  T
Q  205 caatagaatgttccacaagaaaccatg 231  Q
    || || | |||| ||||||||||||||    
T  13069718 cactaaagtgttgcacaagaaaccatg 13069692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 7908568 - 7908445
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  | | |||||||||||||||||||     |||| | ||||||| ||||||||||||  || || | |||||||||| |||||||| |     
T  7908568 caattgtcactattgaattccaagaacaaaagatgatttgttatgatagctagctactctatttatagtttacaa-tgacttaagccctaagaaatataa 7908470  T
Q  205 caatagaatgttccacaagaaacca 229  Q
    || ||||||||||||||||||||||    
T  7908469 cactagaatgttccacaagaaacca 7908445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 17023281 - 17023155
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| ||||||||||||||||||||    || |   | | | |||||||||||||||| |||| | | |||| ||||||||||| || ||    
T  17023281 caattgtcacttattatttccaagaacaaaagatgggtttacaaactagatggctgctctatttatagtctaacattgacttgagccccaagaattaaat 17023182  T
Q  205 caatagaatgttccacaagaaaccatg 231  Q
    || || | |||| ||||||||||||||    
T  17023181 cactaaagtgttgcacaagaaaccatg 17023155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 17209645 - 17209561
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||| ||||||||||||  || || | |||||||||| |||||| |||||| |||||||||||||||| ||||||| |||||||    
T  17209645 gctagctactctatttatagtttacaa-tgacttaagccctaagaaacacatcactagaatgttccacaag-aaccatgggctttta 17209561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 13418355 - 13418299
Alignment:
Q  183 acttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    |||||||||| | |||||| |||| |||||||||||||||||||||| | |||||||    
T  13418355 acttaagccctacgaaatatatcactagaatgttccacaagaaaccacgagctttta 13418299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 19656145 - 19656213
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagc 173  Q
    |||||||||||||| |||||| ||||||||||||||  || | || | ||||||| |||||||||||||    
T  19656145 caattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatagc 19656213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 2721979 - 2721912
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| ||||||||||| |||||||||  || | || | ||||||| ||||||||||||    
T  2721979 caattgtcacttattatttccaagaataaaagatgaatatttgtgatggctagctactctatttatag 2721912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 27407177 - 27407123
Alignment:
Q  185 ttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    |||||||| |||||||| | || |||||||||||||||||||||| | |||||||    
T  27407177 ttaagccctaagaaatataacactagaatgttccacaagaaaccacgggctttta 27407123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 36076187 - 36076110
Alignment:
Q  161 ctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    |||||||||||| ||| ||| | |||||  || ||| ||||||||| |||||||||||||||||||||| | |||||||    
T  36076187 ctctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccacaagaaaccaagggctttta 36076110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 13604999 - 13604958
Alignment:
Q  198 aatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||||| || ||||||||||||||||||||| |||||||    
T  13604999 aatacatcactataatgttccacaagaaaccatgagctttta 13604958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 14659269 - 14659228
Alignment:
Q  198 aatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||||| |||||||||||||||||||||| | |||||||    
T  14659269 aatacatcactagaatgttccacaagaaaccacgggctttta 14659228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 82650 - 82772
Alignment:
Q  105 caattgtcacttat-aatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaataca 203  Q
    |||| ||||||||| ||||||||| ||||||||||||    ||||||||||||| | |||||||||||| ||| ||||| ||||||||||||||||||||    
T  82650 caatggtcacttattaatttccaaaaacaaaagatgattgaatatgtttgctagatactctatttatagtctataacta-cttaagccccaagaaataca 82748  T
Q  204 tcaatagaatgttccacaagaaac 227  Q
    ||||||||||||||||||||||||    
T  82749 tcaatagaatgttccacaagaaac 82772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 520749 - 520670
Alignment:
Q  151 ttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatg 231  Q
    ||||||||| ||||||||||||  || ||| |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  520749 ttgctagctactctatttatagtttataac-aacttaagccccaagaaatatatcactagaatgttccacaagaaaccatg 520670  T

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Target: scaffold1559 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 108 - 226
Target Start/End: Complemental strand, 1445 - 1328
Alignment:
Q  108 ttgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaa 207  Q
    ||||||||||| |||||||||||||||||||||    |||| ||||||||||||| |||||||| |||| |||| |||||||||   ||||||| |||||    
T  1445 ttgtcacttattatttccaagaacaaaagatgattcaatatatttgctagctgctttatttataacctataact-acttaagccttgagaaatatatcaa 1347  T
Q  208 tagaatgttccacaagaaa 226  Q
    |||||||||||||||||||    
T  1346 tagaatgttccacaagaaa 1328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 172783 - 172650
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||  | | |||||||||||||||||||     | || ||||||||| ||||||||||||  || || | ||||||||||||||||||| ||    
T  172783 caattgtcactattgaattccaagaacaaaagatgaattgttgtgattgctagctactctatttatagtttacaa-tgacttaagccccaagaaatatat 172685  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||| ||||||||| | |||||||    
T  172684 cactagaatgttccagaagaaaccacgggctttta 172650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 22780 - 22903
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||   ||||||||||||||| ||||||    ||| |||||| |||| ||||||||||||  || ||||| || || ||||||||| |||||    
T  22780 caattgtcactataaatttccaagaacaagagatgattgaatacgtttgcaagctactctatttatagtttacaacta-ctaaaaccccaagaagtacat 22878  T
Q  205 caatagaatgttccacaagaaacca 229  Q
     |||||||| |||||||||||||||    
T  22879 taatagaatattccacaagaaacca 22903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 3560 - 3426
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaaatacat 204  Q
    |||||||||||||| ||||||||||| |||||||||   |   || | ||||||| |||||||||||| |||| |   ||||||  || ||| |||||||    
T  3560 caattgtcacttattatttccaagaagaaaagatgaatgttactgatagctagctactctatttatagtctaatatcgacttaaaacctaagcaatacat 3461  T
Q  205 caatagaatgttccacaagaaaccatgtgctttta 239  Q
    || |||||||||||| ||||||||| | |||||||    
T  3460 cactagaatgttccaaaagaaaccaagcgctttta 3426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 38540 - 38447
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccccaagaa 198  Q
    ||||||||||||||||||||||||||||||||||||  | ||| || || | ||||||||| | |||| |||| | | |||||||||| |||||    
T  38540 caattgtcacttataatttccaagaacaaaagatgaatagataagtctgatggctgctctactaatagtctaatattgacttaagccctaagaa 38447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 23312 - 23245
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| |||||||||||||||||||||  || | || | ||||||| ||||||||||||    
T  23312 caattgtcacttattatttccaagaacaaaagatgaatatttgtgatggctagctactctatttatag 23245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 44411 - 44452
Alignment:
Q  198 aatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  44411 aatacatcactagaatgttccacaagaaaccatgagctttta 44452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 8947 - 9022
Alignment:
Q  153 gctagctgctctatttatagcctaaaactaacttaagccccaagaaatacatcaatagaatgttccacaagaaacca 229  Q
    ||||||| |||||||||||| ||| ||| | |||||  || ||| ||||||||| ||||||||||||||||||||||    
T  8947 gctagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccacaagaaacca 9022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 14073 - 14029
Alignment:
Q  183 acttaagccccaagaaatacatcaatagaatgttccacaagaaac 227  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||    
T  14073 acttaagtcccaagatatacatcagtagaatgttccacaagaaac 14029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 2556 - 2489
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| |||||| ||||||||||||||  || | || | ||||||| ||||||||||||    
T  2556 caattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatag 2489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 19478 - 19410
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagc 173  Q
    |||||||||||||| |||||| ||||||||||||||  || | || | ||||||| |||||||||||||    
T  19478 caattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatagc 19410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1323 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1323
Description:

Target: scaffold1323; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 1948 - 2015
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| |||||| ||||||||||||||  || | || | ||||||| ||||||||||||    
T  1948 caattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatag 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 1987 - 2054
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| |||||| ||||||||||||||  || | || | ||||||| ||||||||||||    
T  1987 caattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatag 2054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 6466 - 6399
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| |||||| ||||||||||||||  || | || | ||||||| ||||||||||||    
T  6466 caattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatag 6399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 11080 - 11013
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| |||||| ||||||||||||||  || | || | ||||||| ||||||||||||    
T  11080 caattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatag 11013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 9075 - 9008
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatag 172  Q
    |||||||||||||| |||||| ||||||||||||||  || | || | ||||||| ||||||||||||    
T  9075 caattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatag 9008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 31224 - 31267
Alignment:
Q  157 gctgctctatttatagcctaaaa-ctaacttaagccccaagaaa 199  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  31224 gctgctctatttatagcctaaaagctaacttaagccctaagaaa 31267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 33374 - 33415
Alignment:
Q  159 tgctctatttatagcctaaaa-ctaacttaagccccaagaaa 199  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  33374 tgctctatttatagcctaaaagctaacttaagccctaagaaa 33415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 13890 - 13848
Alignment:
Q  157 gctgctctatttatagcctaaaactaacttaagccccaagaaa 199  Q
    |||||||||||||||||||||  ||||||||||||| ||||||    
T  13890 gctgctctatttatagcctaatgctaacttaagcccaaagaaa 13848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 49938 - 49904
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatg 139  Q
    |||||||||||||| ||||||||||||||||||||    
T  49938 caattgtcacttattatttccaagaacaaaagatg 49904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 9293 - 9334
Alignment:
Q  198 aatacatcaatagaatgttccacaagaaaccatgtgctttta 239  Q
    ||||||||| |||||||||||||||||||||| | |||||||    
T  9293 aatacatcactagaatgttccacaagaaaccacgggctttta 9334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 26888 - 26956
Alignment:
Q  105 caattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagc 173  Q
    |||||||||||||| |||||  ||||||||||||||  || | || | ||||||| |||||||||||||    
T  26888 caattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatagc 26956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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