View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18225_low_1 (Length: 535)

Name: NF18225_low_1
Description: NF18225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18225_low_1
NF18225_low_1
[»] chr6 (16 HSPs)
chr6 (246-532)||(30748007-30748284)
chr6 (246-360)||(31219161-31219275)
chr6 (246-345)||(31218963-31219062)
chr6 (99-211)||(1947417-1947528)
chr6 (456-532)||(30748280-30748356)
chr6 (99-210)||(16441775-16441885)
chr6 (246-360)||(23507957-23508070)
chr6 (130-193)||(19646027-19646090)
chr6 (397-481)||(29856904-29856988)
chr6 (258-352)||(12676479-12676573)
chr6 (399-473)||(19600133-19600206)
chr6 (271-331)||(6468811-6468871)
chr6 (130-193)||(5138503-5138565)
chr6 (99-193)||(27127493-27127586)
chr6 (396-481)||(29845638-29845723)
chr6 (483-523)||(31239730-31239770)
[»] chr5 (71 HSPs)
chr5 (276-532)||(19186059-19186305)
chr5 (259-532)||(19182971-19183233)
chr5 (368-534)||(13650988-13651159)
chr5 (246-488)||(21069297-21069538)
chr5 (246-534)||(31946880-31947152)
chr5 (248-480)||(9537033-9537264)
chr5 (246-385)||(4592869-4593008)
chr5 (246-360)||(8074459-8074573)
chr5 (246-467)||(9537943-9538164)
chr5 (258-385)||(25590451-25590577)
chr5 (246-348)||(28591127-28591229)
chr5 (246-360)||(546037-546150)
chr5 (246-385)||(2464677-2464816)
chr5 (246-360)||(16611736-16611850)
chr5 (246-385)||(14891123-14891258)
chr5 (246-360)||(2466775-2466889)
chr5 (246-332)||(18400198-18400284)
chr5 (259-383)||(8075811-8075935)
chr5 (246-345)||(40612675-40612774)
chr5 (270-385)||(32641702-32641817)
chr5 (265-383)||(32640315-32640433)
chr5 (248-352)||(18004648-18004752)
chr5 (257-352)||(544668-544762)
chr5 (456-532)||(19185987-19186063)
chr5 (456-527)||(19183229-19183299)
chr5 (246-308)||(13651173-13651234)
chr5 (483-532)||(544966-545015)
chr5 (483-532)||(4593174-4593223)
chr5 (246-351)||(16979000-16979105)
chr5 (483-532)||(40612413-40612462)
chr5 (284-343)||(4594118-4594176)
chr5 (488-529)||(545801-545842)
chr5 (246-351)||(13483029-13483133)
chr5 (483-532)||(14890917-14890966)
chr5 (483-532)||(28590022-28590071)
chr5 (393-474)||(32555434-32555514)
chr5 (483-532)||(40611579-40611628)
chr5 (483-531)||(2464989-2465037)
chr5 (484-528)||(4593868-4593912)
chr5 (456-532)||(31946810-31946886)
chr5 (409-480)||(2464820-2464891)
chr5 (483-534)||(2466526-2466577)
chr5 (483-534)||(32641495-32641546)
chr5 (301-347)||(14881010-14881056)
chr5 (278-385)||(28589739-28589846)
chr5 (483-532)||(8074770-8074819)
chr5 (483-528)||(28590872-28590916)
chr5 (483-532)||(32640607-32640656)
chr5 (483-531)||(9537355-9537403)
chr5 (246-343)||(13483174-13483275)
chr5 (409-465)||(28591029-28591085)
chr5 (485-528)||(23773301-23773344)
chr5 (134-201)||(28782706-28782773)
chr5 (409-479)||(8074601-8074671)
chr5 (409-479)||(8075735-8075805)
chr5 (409-479)||(25590581-25590651)
chr5 (486-528)||(25590752-25590794)
chr5 (409-479)||(40611411-40611481)
chr5 (423-479)||(4593025-4593081)
chr5 (130-186)||(10317259-10317315)
chr5 (415-479)||(32640445-32640509)
chr5 (409-479)||(14889920-14889990)
chr5 (409-479)||(14891049-14891119)
chr5 (485-531)||(23773186-23773232)
chr5 (409-479)||(40612561-40612631)
chr5 (490-531)||(14890096-14890137)
chr5 (399-480)||(18004799-18004880)
chr5 (246-283)||(24900410-24900447)
chr5 (483-527)||(8075595-8075638)
chr5 (423-479)||(28589864-28589920)
chr5 (396-480)||(34173418-34173502)
[»] chr8 (66 HSPs)
chr8 (265-532)||(41754635-41754891)
chr8 (246-385)||(32898421-32898560)
chr8 (397-532)||(41754127-41754262)
chr8 (294-479)||(45476218-45476403)
chr8 (250-385)||(35177407-35177542)
chr8 (246-360)||(35178805-35178919)
chr8 (308-479)||(45476445-45476616)
chr8 (248-464)||(31074004-31074220)
chr8 (246-385)||(1952946-1953084)
chr8 (267-360)||(5965443-5965536)
chr8 (246-480)||(5737904-5738138)
chr8 (249-473)||(33314872-33315093)
chr8 (117-210)||(43819551-43819643)
chr8 (119-237)||(7207194-7207310)
chr8 (99-201)||(24066973-24067074)
chr8 (246-460)||(30134574-30134788)
chr8 (246-337)||(41754006-41754097)
chr8 (290-480)||(28524810-28525000)
chr8 (246-383)||(10407562-10407699)
chr8 (456-532)||(41754563-41754639)
chr8 (99-193)||(617525-617617)
chr8 (99-193)||(623918-624010)
chr8 (277-467)||(28619028-28619219)
chr8 (99-201)||(42542994-42543095)
chr8 (483-532)||(10406510-10406559)
chr8 (286-352)||(28619554-28619620)
chr8 (491-532)||(28526301-28526342)
chr8 (483-532)||(30134855-30134904)
chr8 (483-532)||(32898199-32898248)
chr8 (265-341)||(1951970-1952045)
chr8 (270-472)||(24198966-24199164)
chr8 (99-186)||(589913-589998)
chr8 (275-383)||(5736879-5736987)
chr8 (286-474)||(12637648-12637833)
chr8 (485-532)||(28006330-28006377)
chr8 (485-532)||(28063633-28063680)
chr8 (258-480)||(31075172-31075392)
chr8 (491-532)||(35177721-35177762)
chr8 (393-473)||(9626349-9626429)
chr8 (254-310)||(28005359-28005415)
chr8 (254-310)||(28062662-28062718)
chr8 (409-485)||(32898341-32898417)
chr8 (301-385)||(10406269-10406353)
chr8 (491-534)||(31074363-31074406)
chr8 (393-456)||(39138569-39138632)
chr8 (409-479)||(1952872-1952942)
chr8 (163-209)||(12221022-12221068)
chr8 (493-535)||(28062997-28063039)
chr8 (289-343)||(41121160-41121214)
chr8 (236-310)||(59548-59624)
chr8 (483-532)||(5965176-5965225)
chr8 (483-532)||(35178560-35178609)
chr8 (99-199)||(27737704-27737803)
chr8 (493-533)||(28005694-28005734)
chr8 (393-465)||(28006492-28006564)
chr8 (393-465)||(28063795-28063867)
chr8 (483-531)||(28619288-28619336)
chr8 (160-199)||(8210174-8210213)
chr8 (152-198)||(4308834-4308880)
chr8 (401-479)||(36032869-36032947)
chr8 (267-360)||(8569437-8569530)
chr8 (428-485)||(9625380-9625437)
chr8 (491-528)||(28525126-28525163)
chr8 (491-527)||(10407343-10407379)
chr8 (393-481)||(28526424-28526512)
chr8 (491-527)||(36033038-36033074)
[»] chr7 (86 HSPs)
chr7 (246-360)||(48646057-48646171)
chr7 (248-385)||(10899049-10899186)
chr7 (246-385)||(35727707-35727845)
chr7 (246-342)||(44333147-44333243)
chr7 (246-382)||(7258283-7258419)
chr7 (246-360)||(48788673-48788787)
chr7 (246-479)||(46286511-46286744)
chr7 (246-347)||(43457465-43457566)
chr7 (258-473)||(8048672-8048887)
chr7 (250-360)||(8374926-8375036)
chr7 (246-360)||(30925009-30925123)
chr7 (103-210)||(48705644-48705750)
chr7 (246-360)||(48647444-48647558)
chr7 (246-348)||(48777264-48777366)
chr7 (267-383)||(13578299-13578414)
chr7 (246-387)||(44334424-44334564)
chr7 (270-385)||(7259660-7259775)
chr7 (246-348)||(8375596-8375698)
chr7 (246-385)||(35729062-35729201)
chr7 (254-385)||(42477397-42477527)
chr7 (246-480)||(12223580-12223814)
chr7 (246-346)||(45583692-45583792)
chr7 (278-360)||(44529068-44529150)
chr7 (286-348)||(44530624-44530686)
chr7 (265-383)||(12220050-12220167)
chr7 (116-201)||(33474361-33474445)
chr7 (291-385)||(45584472-45584566)
chr7 (246-348)||(39708111-39708213)
chr7 (483-532)||(48646368-48646417)
chr7 (246-387)||(5930107-5930247)
chr7 (483-532)||(42477699-42477748)
chr7 (483-532)||(48788430-48788479)
chr7 (246-338)||(21062825-21062917)
chr7 (393-465)||(24287635-24287707)
chr7 (248-360)||(33607624-33607736)
chr7 (246-338)||(34704917-34705009)
chr7 (483-531)||(45583906-45583954)
chr7 (273-473)||(24288754-24288954)
chr7 (294-454)||(25621628-25621788)
chr7 (482-532)||(45584251-45584301)
chr7 (266-448)||(27067811-27067992)
chr7 (266-448)||(27210321-27210502)
chr7 (483-532)||(44333456-44333505)
chr7 (273-337)||(10894385-10894449)
chr7 (483-531)||(10898829-10898877)
chr7 (246-383)||(19433912-19434049)
chr7 (296-473)||(32793229-32793406)
chr7 (488-532)||(33607271-33607315)
chr7 (484-532)||(39708442-39708490)
chr7 (299-359)||(43461730-43461789)
chr7 (493-532)||(7259447-7259486)
chr7 (409-479)||(7258426-7258496)
chr7 (396-466)||(39824287-39824357)
chr7 (491-532)||(30924771-30924812)
chr7 (258-350)||(24844593-24844685)
chr7 (254-360)||(8879544-8879651)
chr7 (495-533)||(330077-330115)
chr7 (267-480)||(7509353-7509565)
chr7 (270-348)||(34888936-34889014)
chr7 (409-479)||(44333288-44333358)
chr7 (488-530)||(48787608-48787650)
chr7 (409-479)||(48788574-48788644)
chr7 (484-521)||(32794560-32794597)
chr7 (491-532)||(35728025-35728066)
chr7 (483-532)||(48647197-48647246)
chr7 (409-465)||(42477531-42477587)
chr7 (484-527)||(12221623-12221666)
chr7 (298-458)||(22621187-22621347)
chr7 (409-464)||(43457619-43457674)
chr7 (483-534)||(44334211-44334261)
chr7 (410-480)||(384991-385061)
chr7 (393-480)||(8870132-8870221)
chr7 (409-479)||(10898975-10899045)
chr7 (235-310)||(24934799-24934876)
chr7 (409-479)||(48647345-48647415)
chr7 (491-532)||(7258601-7258642)
chr7 (415-480)||(8375504-8375569)
chr7 (491-532)||(10894671-10894712)
chr7 (483-532)||(12223442-12223490)
chr7 (483-528)||(19433676-19433720)
chr7 (491-532)||(24287795-24287836)
chr7 (426-479)||(24934965-24935018)
chr7 (327-360)||(33060899-33060932)
chr7 (165-237)||(5082481-5082552)
chr7 (491-531)||(25621469-25621509)
chr7 (393-473)||(30917867-30917947)
[»] chr2 (74 HSPs)
chr2 (246-479)||(21733653-21733889)
chr2 (246-384)||(31091504-31091642)
chr2 (246-485)||(34037549-34037788)
chr2 (246-348)||(32766252-32766354)
chr2 (246-385)||(2910108-2910247)
chr2 (259-462)||(17466727-17466930)
chr2 (246-359)||(40000336-40000449)
chr2 (249-348)||(17330243-17330342)
chr2 (246-348)||(24459459-24459561)
chr2 (250-360)||(31090176-31090286)
chr2 (246-384)||(39015013-39015151)
chr2 (246-360)||(24458068-24458182)
chr2 (246-360)||(32764946-32765060)
chr2 (246-480)||(34582551-34582785)
chr2 (280-360)||(14704048-14704128)
chr2 (235-485)||(14887374-14887626)
chr2 (246-360)||(39016384-39016496)
chr2 (274-359)||(7073675-7073760)
chr2 (246-341)||(5915012-5915107)
chr2 (130-201)||(7888572-7888643)
chr2 (268-462)||(7412122-7412316)
chr2 (247-348)||(38985002-38985103)
chr2 (117-193)||(10824259-10824334)
chr2 (246-474)||(38853763-38853991)
chr2 (327-473)||(26585167-26585310)
chr2 (232-447)||(12746115-12746332)
chr2 (483-532)||(32765257-32765306)
chr2 (99-191)||(803889-803980)
chr2 (290-382)||(17466093-17466185)
chr2 (265-347)||(2911505-2911587)
chr2 (269-412)||(15441920-15442063)
chr2 (483-532)||(2910420-2910469)
chr2 (483-532)||(32766035-32766084)
chr2 (409-485)||(24458211-24458287)
chr2 (483-531)||(24459210-24459258)
chr2 (289-360)||(26586296-26586367)
chr2 (289-348)||(31814357-31814416)
chr2 (491-532)||(18675452-18675493)
chr2 (257-347)||(21732131-21732216)
chr2 (483-532)||(24458380-24458429)
chr2 (483-532)||(31091282-31091331)
chr2 (483-532)||(39256768-39256817)
chr2 (483-531)||(2911244-2911291)
chr2 (258-346)||(5914324-5914412)
chr2 (393-465)||(18676719-18676791)
chr2 (417-465)||(21732274-21732322)
chr2 (409-480)||(17330120-17330191)
chr2 (409-480)||(32765088-32765159)
chr2 (409-480)||(43380738-43380809)
chr2 (155-201)||(445602-445648)
chr2 (246-348)||(8420021-8420123)
chr2 (270-348)||(33161799-33161877)
chr2 (325-480)||(37607189-37607344)
chr2 (483-532)||(31090477-31090526)
chr2 (393-474)||(38854944-38855025)
chr2 (491-528)||(38855959-38855996)
chr2 (117-201)||(6975837-6975919)
chr2 (424-480)||(31442517-31442573)
chr2 (246-357)||(33163462-33163574)
chr2 (409-480)||(14704156-14704227)
chr2 (418-465)||(31090317-31090364)
chr2 (495-534)||(31442914-31442953)
chr2 (410-481)||(31443125-31443196)
chr2 (485-532)||(34582383-34582430)
chr2 (492-531)||(39016149-39016188)
chr2 (409-479)||(24459356-24459426)
chr2 (152-198)||(33726405-33726451)
chr2 (409-479)||(39015156-39015226)
chr2 (409-479)||(39016285-39016355)
chr2 (153-198)||(2239607-2239652)
chr2 (267-348)||(11985720-11985801)
chr2 (491-532)||(38854257-38854298)
chr2 (483-532)||(40000090-40000139)
chr2 (275-347)||(43380617-43380689)
[»] chr3 (71 HSPs)
chr3 (246-446)||(3671047-3671246)
chr3 (246-360)||(17700526-17700640)
chr3 (246-348)||(48572993-48573095)
chr3 (246-360)||(17701920-17702034)
chr3 (246-360)||(36278960-36279074)
chr3 (246-360)||(52318318-52318432)
chr3 (270-359)||(11773053-11773142)
chr3 (246-383)||(55388081-55388218)
chr3 (246-402)||(50753825-50753981)
chr3 (246-348)||(2591635-2591737)
chr3 (246-348)||(45600952-45601053)
chr3 (246-360)||(47118052-47118166)
chr3 (270-480)||(36827356-36827566)
chr3 (247-480)||(20464078-20464311)
chr3 (277-385)||(36280293-36280401)
chr3 (246-348)||(2592020-2592122)
chr3 (246-360)||(19114541-19114655)
chr3 (99-211)||(21814202-21814312)
chr3 (246-345)||(34263813-34263912)
chr3 (246-348)||(33428448-33428550)
chr3 (274-385)||(53959076-53959187)
chr3 (99-199)||(15502622-15502721)
chr3 (246-360)||(47075352-47075466)
chr3 (246-348)||(55389482-55389584)
chr3 (246-384)||(52316987-52317125)
chr3 (99-198)||(41998907-41999005)
chr3 (117-195)||(1165784-1165861)
chr3 (286-348)||(48574472-48574534)
chr3 (275-359)||(49261539-49261620)
chr3 (369-466)||(3694035-3694132)
chr3 (252-348)||(48808380-48808476)
chr3 (117-199)||(15005830-15005911)
chr3 (246-348)||(19115160-19115261)
chr3 (114-211)||(3084012-3084107)
chr3 (99-198)||(34060751-34060850)
chr3 (247-313)||(19331117-19331183)
chr3 (483-532)||(17700838-17700887)
chr3 (483-532)||(17701682-17701731)
chr3 (483-532)||(36279264-36279313)
chr3 (483-530)||(48573307-48573354)
chr3 (246-333)||(53957683-53957769)
chr3 (263-337)||(47427885-47427959)
chr3 (409-479)||(55389371-55389441)
chr3 (483-532)||(36280072-36280121)
chr3 (483-532)||(55389224-55389273)
chr3 (250-474)||(40205893-40206118)
chr3 (246-349)||(47428575-47428672)
chr3 (491-531)||(48574214-48574254)
chr3 (410-480)||(55388211-55388281)
chr3 (483-532)||(48808682-48808731)
chr3 (491-532)||(48809411-48809452)
chr3 (483-532)||(55388381-55388430)
chr3 (409-481)||(2591776-2591848)
chr3 (409-465)||(17700670-17700726)
chr3 (409-465)||(36279103-36279159)
chr3 (495-531)||(53958858-53958894)
chr3 (117-199)||(21195283-21195364)
chr3 (277-347)||(33427791-33427860)
chr3 (409-479)||(48808523-48808593)
chr3 (415-480)||(19114670-19114735)
chr3 (275-360)||(39497244-39497329)
chr3 (487-531)||(52317237-52317280)
chr3 (129-196)||(54143822-54143889)
chr3 (140-194)||(22455369-22455423)
chr3 (409-479)||(48573136-48573206)
chr3 (318-348)||(48809667-48809697)
chr3 (152-201)||(28954253-28954302)
chr3 (495-532)||(40206381-40206418)
chr3 (491-532)||(52318079-52318120)
chr3 (428-480)||(33837333-33837385)
chr3 (409-465)||(48574375-48574431)
[»] chr1 (60 HSPs)
chr1 (254-387)||(7945528-7945661)
chr1 (246-385)||(32665746-32665885)
chr1 (250-360)||(5782426-5782536)
chr1 (249-385)||(9339657-9339793)
chr1 (265-385)||(10333162-10333282)
chr1 (246-461)||(8975167-8975382)
chr1 (246-480)||(6612427-6612652)
chr1 (277-360)||(9341026-9341109)
chr1 (258-349)||(52440571-52440662)
chr1 (246-348)||(10332994-10333096)
chr1 (246-360)||(22856688-22856802)
chr1 (399-532)||(534378-534510)
chr1 (117-201)||(51046645-51046728)
chr1 (265-348)||(5783122-5783205)
chr1 (252-348)||(7944169-7944265)
chr1 (246-383)||(52439487-52439620)
chr1 (130-199)||(32268033-32268102)
chr1 (289-348)||(6613992-6614051)
chr1 (289-473)||(50107091-50107275)
chr1 (483-532)||(9340795-9340844)
chr1 (119-211)||(13925101-13925191)
chr1 (456-530)||(534308-534382)
chr1 (248-349)||(1001164-1001265)
chr1 (246-480)||(11060666-11060899)
chr1 (246-480)||(44719358-44719592)
chr1 (250-346)||(3117661-3117757)
chr1 (248-340)||(44019996-44020088)
chr1 (486-532)||(32664824-32664870)
chr1 (248-447)||(51450011-51450209)
chr1 (116-193)||(1107386-1107462)
chr1 (483-532)||(7945329-7945378)
chr1 (286-347)||(25037926-25037987)
chr1 (286-347)||(25043138-25043199)
chr1 (265-345)||(534574-534653)
chr1 (99-193)||(39421026-39421126)
chr1 (409-465)||(9340941-9340997)
chr1 (163-211)||(12173173-12173221)
chr1 (483-526)||(25038197-25038240)
chr1 (483-526)||(25043409-25043452)
chr1 (333-421)||(33342511-33342599)
chr1 (298-345)||(34088485-34088532)
chr1 (483-534)||(52440313-52440364)
chr1 (163-237)||(46289632-46289705)
chr1 (131-191)||(3894800-3894861)
chr1 (483-532)||(32665531-32665580)
chr1 (484-532)||(34088213-34088259)
chr1 (483-532)||(51450340-51450389)
chr1 (483-528)||(52439781-52439826)
chr1 (416-480)||(9339804-9339868)
chr1 (393-473)||(11059771-11059851)
chr1 (409-465)||(32665686-32665742)
chr1 (493-532)||(7944489-7944528)
chr1 (99-166)||(46289579-46289645)
chr1 (482-532)||(6613736-6613786)
chr1 (153-199)||(27210749-27210795)
chr1 (136-198)||(41898878-41898940)
chr1 (325-481)||(44720727-44720885)
chr1 (483-532)||(6612750-6612799)
chr1 (427-480)||(16249832-16249885)
chr1 (393-465)||(29766078-29766150)
[»] chr4 (49 HSPs)
chr4 (246-348)||(53771062-53771164)
chr4 (246-479)||(26172822-26173057)
chr4 (246-348)||(47878497-47878599)
chr4 (246-384)||(42278057-42278195)
chr4 (235-348)||(47874559-47874674)
chr4 (246-357)||(31844730-31844841)
chr4 (246-360)||(53770341-53770455)
chr4 (248-383)||(39868932-39869065)
chr4 (254-474)||(21623004-21623224)
chr4 (246-352)||(4703226-4703332)
chr4 (246-360)||(48740021-48740135)
chr4 (250-431)||(26170652-26170833)
chr4 (265-345)||(54574452-54574532)
chr4 (116-211)||(4867772-4867866)
chr4 (298-480)||(19050298-19050478)
chr4 (250-352)||(26685431-26685528)
chr4 (116-201)||(45674164-45674248)
chr4 (286-465)||(21621871-21622050)
chr4 (246-360)||(39870675-39870789)
chr4 (246-339)||(19051253-19051346)
chr4 (483-532)||(54574744-54574793)
chr4 (288-473)||(6039171-6039356)
chr4 (286-383)||(50694797-50694894)
chr4 (290-344)||(54574822-54574876)
chr4 (482-531)||(19051113-19051162)
chr4 (289-459)||(31844866-31845027)
chr4 (235-316)||(42391933-42392016)
chr4 (267-465)||(4701794-4701990)
chr4 (485-531)||(42278759-42278805)
chr4 (144-201)||(45683989-45684046)
chr4 (491-531)||(21622192-21622232)
chr4 (393-480)||(32244429-32244516)
chr4 (409-480)||(42278200-42278271)
chr4 (250-325)||(44158516-44158591)
chr4 (490-532)||(24745788-24745830)
chr4 (393-439)||(32244610-32244656)
chr4 (409-479)||(47878386-47878456)
chr4 (491-532)||(21622855-21622896)
chr4 (495-532)||(24753288-24753325)
chr4 (483-532)||(42278360-42278409)
chr4 (483-532)||(47874875-47874924)
chr4 (409-465)||(20599802-20599858)
chr4 (409-480)||(47874714-47874785)
chr4 (99-185)||(29722067-29722152)
chr4 (163-237)||(35911151-35911224)
chr4 (415-465)||(42391802-42391852)
chr4 (290-347)||(2786273-2786330)
chr4 (298-359)||(25810415-25810476)
chr4 (118-199)||(45257608-45257688)
[»] scaffold0034 (1 HSPs)
scaffold0034 (246-348)||(116063-116165)
[»] scaffold0039 (3 HSPs)
scaffold0039 (250-479)||(79085-79314)
scaffold0039 (246-360)||(79684-79798)
scaffold0039 (250-343)||(74331-74424)
[»] scaffold0045 (2 HSPs)
scaffold0045 (118-199)||(62583-62663)
scaffold0045 (118-199)||(69915-69995)
[»] scaffold0767 (3 HSPs)
scaffold0767 (246-360)||(5607-5721)
scaffold0767 (483-531)||(5992-6036)
scaffold0767 (250-347)||(6264-6361)
[»] scaffold0169 (1 HSPs)
scaffold0169 (131-199)||(9025-9093)
[»] scaffold0209 (1 HSPs)
scaffold0209 (99-193)||(29349-29441)
[»] scaffold0237 (2 HSPs)
scaffold0237 (397-481)||(3106-3190)
scaffold0237 (396-481)||(1843-1928)
[»] scaffold0369 (1 HSPs)
scaffold0369 (296-360)||(9137-9201)
[»] scaffold0016 (1 HSPs)
scaffold0016 (235-310)||(36574-36650)


Alignment Details
Target: chr6 (Bit Score: 142; Significance: 3e-74; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 246 - 532
Target Start/End: Original strand, 30748007 - 30748284
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  30748007 tcactttagtccctgattctgcacctcgctgtcacataggtccctgacttaggattaaatacaaacaagtctctgactctacactttcgttatcacttta 30748106  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    ||| ||| |||||||        |||||||||||||||||||         ||||||||||||||||||||||||| |||||||||||||||||  ||||    
T  30748107 gtcgctgccgttaaaaaaaactattaagtgatgatgtggcac---------gctgacaaggagtatgacgtgtcacagggactaaagtgaaagtaaaaaa 30748197  T
Q  446 tggccactttggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||| || ||||||||||||||| |||||| ||||| |||| |||||||||| |||||||||||| ||||||||| | ||||||||||    
T  30748198 tggtcaatttggtccctgaatcaaaaatcaatatcctcaatttactgttagatccctgactgtgtatacttactgttagttaggtcc 30748284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 31219275 - 31219161
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||| ||||||||| |||||||||||||||||||| ||  | ||||||||||||||||||| ||||  |||||||  |||||||||||||||||||    
T  31219275 tcactttaatccctgactctgcacctcgctgtcacataggtcattaactcaggattaaatacaaagaagttcctgactcgacacttccgttatcacttta 31219176  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||||| |||||||    
T  31219175 gtctctgacgttaaa 31219161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 246 - 345
Target Start/End: Original strand, 31218963 - 31219062
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||| || |||||| |||||||||||||||||||| ||| | ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  31218963 tcactttaatctctgactctgcacctcgctgtcacataggtccttaactcaggattaaatacaaagaagttcctgactctgcacttccgttatcacttta 31219062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 99 - 211
Target Start/End: Complemental strand, 1947528 - 1947417
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    |||||||||| |||   |||||||||||||| |||||||||||||||||||| ||| |||||||| |||| |||| ||||||||||||||||||| ||||    
T  1947528 taaagagtgttcttgaggcattggttaagag-aacataaatagaaataatttgttggaaaatggtaaaaagtgttaaattcaactttctaaaagtcaaaa 1947430  T
Q  199 agtaataatttcc 211  Q
    |||  ||||||||    
T  1947429 agttgtaatttcc 1947417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 456 - 532
Target Start/End: Original strand, 30748280 - 30748356
Alignment:
Q  456 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  30748280 ggtccctgaatcgaaaatcaatatcctcaacttactgttaggtccctgactgtgtatacttactgttagttaggtcc 30748356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 16441775 - 16441885
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    |||||||||| |||||  |||||||||| || || ||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  16441775 taaagagtgttctttggacattggttaaaag-aatataaatataaataatttgttgaaaagtggtgaaaaatgttgaattcaaatttctaaaagtaaaaa 16441873  T
Q  199 agtaataatttc 210  Q
    |||  |||||||    
T  16441874 agttgtaatttc 16441885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 23507957 - 23508070
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| ||| || | |||||| ||||||||||| | ||||| ||||||||||||||||| || ||| ||||| | ||||||| |||||||||||    
T  23507957 tcactttagtctctg-ctctacacctccctgtcacataggttcctgattcaggattaaatacaaacaaatctatgactttacacttcctttatcacttta 23508055  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| |||||||||||    
T  23508056 gtccctgtcgttaaa 23508070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 19646090 - 19646027
Alignment:
Q  130 gaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 193  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  19646090 gaacataaatagaaaaaatttgttgaaaaatggtgaaaagtgttgaattcaactttttaaaagt 19646027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 29856904 - 29856988
Alignment:
Q  397 gctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 481  Q
    |||||||||| | |||| |||||||  ||| ||||||| |||| |||||||| || ||||||| |||||||||||||| ||||||    
T  29856904 gctgacaaggtgcatgaggtgtcacaaggattaaagtggaagtagaaaatggtcattttggtctctgaatcgaaaatcaatatct 29856988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 12676573 - 12676479
Alignment:
Q  258 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctg 352  Q
    |||||| ||||||||| |||||||  | || ||| ||||||||||||||||||  ||||||| | | |||||||  ||||||| |||||||||||    
T  12676573 ctgactctgcacctcgttgtcacaatggtctctgtctcaggattaaatacaaagtagtctctaaatgtgcacttttgttatcagtttagtctctg 12676479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 473
Target Start/End: Complemental strand, 19600206 - 19600133
Alignment:
Q  399 tgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 473  Q
    |||||||| | ||||  |||||| ||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  19600206 tgacaaggtgcatgaaatgtcacagggactaaagtgaaagtagaaaatggtcactttggt-cctaaatcgaaaat 19600133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 331
Target Start/End: Complemental strand, 6468871 - 6468811
Alignment:
Q  271 tcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcactt 331  Q
    ||||||||||| || ||||||||||| |||||||||||||  ||||||||| | |||||||    
T  6468871 tcgctgtcacaaaggtccctgactcatgattaaatacaaaatagtctctgaatgtgcactt 6468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 5138565 - 5138503
Alignment:
Q  130 gaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 193  Q
    ||||||||||| ||||| ||| || ||||||  ||||||||||||||||||| |||||||||||    
T  5138565 gaacataaatacaaatattttattaaaaaata-tgaaaaatgttgaattcaaatttctaaaagt 5138503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 27127493 - 27127586
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 193  Q
    |||||||||||| |  ||||||| |||||| ||  | ||||||||||| | | |||| ||||||||||||||| |||||| |||||| |||||||    
T  27127493 taaagagtgtccatgatgcattgtttaagatgataa-aaatagaaatattgtattgagaaatggtgaaaaatgatgaatttaactttttaaaagt 27127586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 29845638 - 29845723
Alignment:
Q  396 tgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 481  Q
    ||||||||||| | |||| ||||| |  | ||||||||| |||| |||||| | || ||||||| |||||||||||||| ||||||    
T  29845638 tgctgacaaggtgcatgaggtgtcgcaagaactaaagtggaagtagaaaatagtcattttggtctctgaatcgaaaatcaatatct 29845723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 483 - 523
Target Start/End: Complemental strand, 31239770 - 31239730
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatca 523  Q
    |||||||||||||| ||  ||||||||||||||||||||||    
T  31239770 caacttactgttagatctgtgactgtgcatacttactatca 31239730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 1e-51; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 276 - 532
Target Start/End: Complemental strand, 19186305 - 19186059
Alignment:
Q  276 gtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtg 375  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||  ||||||||||       |||||| |    
T  19186305 gtcacataggtccctgacttaggattaaatacaaacaagtctctgactctacatttccgttatcactttagtccttgtcgttaaaacaatctgttaagcg 19186206  T
Q  376 atgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcg 475  Q
    ||||||||||||         ||||||||||||||||||||||||| ||||| |||||||||||  ||||| | ||||||||| |||| ||| ||||||     
T  19186205 atgatgtggcac---------gctgacaaggagtatgacgtgtcacagggacaaaagtgaaagtaaaaaatagtcactttggt-cctgcatcaaaaatca 19186116  T
Q  476 atatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    || || |||| ||| |||||| |||||||||||| ||||||||||||||||||||||    
T  19186115 atgtcctcaatttattgttagatccctgactgtgtatacttactatcagttaggtcc 19186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 259 - 532
Target Start/End: Original strand, 19182971 - 19183233
Alignment:
Q  259 tgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtta 358  Q
    ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||  ||   |||    
T  19182971 tgactttgcacctcgctgtcacataggtctctgactcaggattaaatacaaataagttcctgactctacacttccgttatcactttagtccttgcgatta 19183070  T
Q  359 aannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggt 458  Q
    ||       ||||||||||||||||||||         ||| ||||||||||||||||||||   ||||||||||||||||  |||||||  |||||| |    
T  19183071 aaaaaatatgttaagtgatgatgtggcac---------gctaacaaggagtatgacgtgtcatatggactaaagtgaaagtaaaaaatggtgactttgct 19183161  T
Q  459 ccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    | |||||||||||||| ||||| |||| |||||||||| ||||| |||||| ||||||||| ||||||||||||    
T  19183162 ctctgaatcgaaaatcaatatcctcaatttactgttagatccct-actgtgtatacttact-tcagttaggtcc 19183233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 368 - 534
Target Start/End: Complemental strand, 13651159 - 13650988
Alignment:
Q  368 gttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtg-----tcacggggactaaagtgaaagtcgaaaatggccactttggtccct 462  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||     |||| |||||||||||||||||  ||||||| |||||| ||||||    
T  13651159 gttaagtgatgatgtggcgcatggcttatgctgacaaggagtatgacgtgacatgtcacagggactaaagtgaaagtaaaaaatggtcactttagtccct 13651060  T
Q  463 gaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcctt 534  Q
    ||| |||||||| |||||  |||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  13651059 gaaccgaaaatcaatatccgcaacttactgttaggtccctgactatgcatacttactattagttaggtcctt 13650988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 246 - 488
Target Start/End: Original strand, 21069297 - 21069538
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| |||||| ||||||||| ||||||| || || ||||||||||||||||||||||||||||  |||||||||||||| ||| ||||||||    
T  21069297 tcactttagtctctgactctgcacctcgttgtcacagaggtctctgactcaggattaaatacaaataagtccttgactctgcacttctgttttcacttta 21069396  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
     | | || |||||||       |||||||||||||||||||| || |||||| ||||||||||||||||||||||   ||| |||||||||||| |||||    
T  21069397 atatatgccgttaaaaaattttgttaagtgatgatgtggcacatgacttatgttgacaaggagtatgacgtgtcatatggattaaagtgaaagtagaaaa 21069496  T
Q  446 tggccactttggtccctgaatcgaaaatcgatatcttcaactt 488  Q
    ||| || |||| ||||||||  ||||||| ||||  |||||||    
T  21069497 tggtca-tttgatccctgaactgaaaatcaatattctcaactt 21069538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 246 - 534
Target Start/End: Complemental strand, 31947152 - 31946880
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| |||| | ||||| | | ||||| |||||| ||| ||| |  |||||||||||| |||||| |||||||  ||||||||||||||||||    
T  31947152 tcactttagtctctgattctgcactttgttgtcatatagattccttacttaaaattaaatacaaacaagtctatgactctagacttccgttatcacttta 31947053  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    ||| |||  ||||||       ||||||||||||||||||||         |||||||| |||||| |||||       |||||||||||||||  ||||    
T  31947052 gtcactgctgttaaaaaaatatgttaagtgatgatgtggcac---------gctgacaatgagtattacgtg-------gactaaagtgaaagtaaaaaa 31946969  T
Q  446 tggccactttggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcctt 534  Q
    ||| ||||||||||||||||||||||||| |||||  ||| |||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  31946968 tggtcactttggtccctgaatcgaaaatcaatatccacaatttactgttagatccctgactgtgtatacttactgtcagttaggtcctt 31946880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 248 - 480
Target Start/End: Original strand, 9537033 - 9537264
Alignment:
Q  248 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    |||||||||||| ||| |||||||||||||||||||| || |||||| || |||||||||||| |||||  ||||| ||||||||| |||||||||||||    
T  9537033 actttagtccctcactctgcacctcgctgtcacataggtctctgacttagaattaaatacaaagaagtc-atgactgtgcacttccattatcactttagt 9537131  T
Q  348 ctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatg 447  Q
    | ||| |||||||       | |||||||||||||||||| ||  ||| |  ||||||   ||||| ||||||| | ||||||||||||||| ||||||     
T  9537132 cactgacgttaaataattatggtaagtgatgatgtggcacatgttttacgacgacaagtcatatgatgtgtcacagtgactaaagtgaaagtagaaaata 9537231  T
Q  448 gccactttggtccctgaatcgaaaatcgatatc 480  Q
    | ||||||| |||||||||| |||||| |||||    
T  9537232 gtcactttgatccctgaatcaaaaatcaatatc 9537264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 246 - 385
Target Start/End: Original strand, 4592869 - 4593008
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | || | ||||||||||||||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4592869 tcactttagtccctgattatgtagctcgctgtcacataagtccctgactcaagattaaatacaaataagtccctgactctgcacttccgttatcacttta 4592968  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||| ||| |||||||       ||||||||||||||||||    
T  4592969 gtccctgacgttaaaaaaatctgttaagtgatgatgtggc 4593008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 8074459 - 8074573
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | |||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8074459 tcactttagtccctgattatgcagctcgctgtcacataagtccctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 8074558  T
Q  346 gtctctgtcgttaaa 360  Q
    ||  ||| |||||||    
T  8074559 gttcctgacgttaaa 8074573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 246 - 467
Target Start/End: Complemental strand, 9538164 - 9537943
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| |||| |||| ||||| |||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||||| ||||    
T  9538164 tcactttggtccctgactctgcatctcgttgtcatataggtccctgactcaggattaaatacaaagaagtctctgattgtgcacttccgttatcatttta 9538065  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    |||||||  ||||||       |||||||||| ||||| ||| ||  ||| | ||| | |   ||||| || ||||  ||||||||||||||||  ||||    
T  9538064 gtctctgatgttaaataattatgttaagtgattatgtgacacatgttttacgatgatatgacatatgatgtttcacatggactaaagtgaaagtataaaa 9537965  T
Q  446 tggccactttggtccctgaatc 467  Q
    ||| ||||||||||||||||||    
T  9537964 tggtcactttggtccctgaatc 9537943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 258 - 385
Target Start/End: Original strand, 25590451 - 25590577
Alignment:
Q  258 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtt 357  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||    
T  25590451 ctgactctgcacctcgctgtcacataggtccctgactc-ggattaaatacaaataagtctctgattctgcacttctgttatcactttaatctctgacgtt 25590549  T
Q  358 aaannnnnnngttaagtgatgatgtggc 385  Q
    |||       ||||||||||||||||||    
T  25590550 aaaaaattttgttaagtgatgatgtggc 25590577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 28591229 - 28591127
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||  ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||    
T  28591229 tcactttgatccctgactctgcacctcgctgtcacataggtccctgactcaggattaaatacaaataaatccctgactctgcacttcctttatcacttta 28591130  T
Q  346 gtc 348  Q
    |||    
T  28591129 gtc 28591127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 546150 - 546037
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||||| || | |||| ||||||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  546150 tcactttagtccc-gattttgcagctcgctgtcacataggtccctgactcaggattaaatacagataagtccttgactctgcacttccgttatcacttta 546052  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| ||| |||||||    
T  546051 gtccctgacgttaaa 546037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 385
Target Start/End: Original strand, 2464677 - 2464816
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| |||| | |||| |||||||||| |||| ||| ||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||    
T  2464677 tcactttagtcactgattctgcagctcgctgtcatataggtccatgactcatgattaaatacaaataagtccctaactctgcacttacgttatcacttta 2464776  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||||||| |||||||       ||||||||||||||||||    
T  2464777 gtctctgacgttaaaaaaatttgttaagtgatgatgtggc 2464816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 16611736 - 16611850
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||| | | ||||| | |||||||||||||||||| || |||||||||||||||||||||| ||| |||||| | |||||||||||||||||||||    
T  16611736 tcactttaattcttgactctacacctcgctgtcacataggtctctgactcaggattaaatacaaagaagcctctgattatgcacttccgttatcacttta 16611835  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||||| |||||||    
T  16611836 gtctctgacgttaaa 16611850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 14891258 - 14891123
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||| ||| |||||||||||||||||||| || |||||||| |||||||| |||    |||||||||||| |||||||||||||||||||    
T  14891258 tcactttggtccctcactctgcacctcgctgtcacataggtctctgactcatgattaaatgcaa----gtctctgactctacacttccgttatcacttta 14891163  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||||||| |||||||       ||||||||||||||||||    
T  14891162 gtctctgacgttaaaaaaatatgttaagtgatgatgtggc 14891123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 2466889 - 2466775
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| ||| |||||| ||||||||||| |||||||| ||  ||| ||||||||||||| ||||||||| || |||||||||||||||||||||||||    
T  2466889 tcactttggtctctgactctgcacctcgctatcacataggtcattgattcaggattaaataaaaataagtccctaactctgcacttccgttatcacttta 2466790  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| ||| |||||||    
T  2466789 gtccctgacgttaaa 2466775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 18400198 - 18400284
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttc 332  Q
    |||||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||| ||| ||||| |||||||||||||||    
T  18400198 tcactttagtccctgactctgcacctcactgtcacataggtccttgactcaggattaaataaaaagaagtcactgactctgcacttc 18400284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 259 - 383
Target Start/End: Complemental strand, 8075935 - 8075811
Alignment:
Q  259 tgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtta 358  Q
    ||||| ||||||||||||| | |||||||||||| ||| ||||||||||||| |||| ||||| ||||||||| |||||||||||||||| ||| ||||     
T  8075935 tgactctgcacctcgctgttagatagatccctgattcaagattaaatacaaaaaagtatctgattctgcactttcgttatcactttagtccctgacgttt 8075836  T
Q  359 aannnnnnngttaagtgatgatgtg 383  Q
    ||       ||||||||||||||||    
T  8075835 aaaaaatctgttaagtgatgatgtg 8075811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 246 - 345
Target Start/End: Complemental strand, 40612774 - 40612675
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | |||| ||| ||||||| ||| ||||||||||||||||||||||| |||  |  ||||||||||||||||||||||||||||    
T  40612774 tcactttagtccctgattttgcagctcactgtcacgtaggtccctgactcaggattaaatacagatattttcctgactctgcacttccgttatcacttta 40612675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 32641817 - 32641702
Alignment:
Q  270 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngt 369  Q
    |||| |||||| ||| ||||| ||||| ||||||||||||||||||  |||||||||||||||||||||||||||| || ||| |||||||       ||    
T  32641817 ctcgttgtcacgtaggtcccttactcaagattaaatacaaataagttgctgactctgcacttccgttatcactttaatccctgacgttaaaaaaatatgt 32641718  T
Q  370 taagtgatgatgtggc 385  Q
    ||||||||||||||||    
T  32641717 taagtgatgatgtggc 32641702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 265 - 383
Target Start/End: Original strand, 32640315 - 32640433
Alignment:
Q  265 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnn 364  Q
    |||||||| |||||||||||  || | ||||||||||||||||||||||||| || |||||  ||||| ||||||||||||||||||| |||||||        
T  32640315 tgcacctcactgtcacataggaccataactcaggattaaatacaaataagtccctaactctaaacttctgttatcactttagtctctgacgttaaaaaaa 32640414  T
Q  365 nnngttaagtgatgatgtg 383  Q
       ||||||||||||||||    
T  32640415 tttgttaagtgatgatgtg 32640433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 248 - 352
Target Start/End: Original strand, 18004648 - 18004752
Alignment:
Q  248 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    |||||||||||||||| |||||||| |||||||| |  ||  |  || ||||||||||||||| | |||| |||||||||||||||||||||||||||||    
T  18004648 actttagtccctgactctgcacctcactgtcacaaaagtctatagcttaggattaaatacaaagaggtctatgactctgcacttccgttatcactttagt 18004747  T
Q  348 ctctg 352  Q
    |||||    
T  18004748 ctctg 18004752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 544668 - 544762
Alignment:
Q  257 cctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctg 352  Q
    ||||||| ||||| ||| ||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||    
T  544668 cctgactctgcacttcg-tgtcagataggtctctgactcaggattaaatacaaataagtcactgactctgcacttccgttataaatttagtttctg 544762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 456 - 532
Target Start/End: Complemental strand, 19186063 - 19185987
Alignment:
Q  456 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||||| ||||| || ||||||||||||||| |||||| || ||||||||| ||||||||||||    
T  19186063 ggtccctgaatcgaaaatcaatatcatctacttactgttaggtctctgactttgtatacttactgtcagttaggtcc 19185987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 456 - 527
Target Start/End: Original strand, 19183229 - 19183299
Alignment:
Q  456 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagtta 527  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  19183229 ggtccctaaatcgaaaatcaatatcatcaacttactgttaggtccctgactgtg-atacttactgtcagtta 19183299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 13651234 - 13651173
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaataca 308  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  13651234 tcactttagtccttgactgtgcacct-gctgtcacataggtccctgactcaggattaaataca 13651173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 544966 - 545015
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  544966 caacttattgttaggtccctgactgtgcatacttactatcagttaggtcc 545015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 4593174 - 4593223
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4593174 caacatactgttaggtccctgactgtgcatacttactatcagttaggtcc 4593223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 351
Target Start/End: Original strand, 16979000 - 16979105
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||| ||||| ||||||| |||| |||| || ||  |||||||| ||||||| |||||||||| || |||||| |||| |||||||| ||||    
T  16979000 tcactttagtccttgactttgcaccttgctgccacaaaggtcattgactcagaattaaatgcaaataagtccctaactctgtacttacgttatcatttta 16979099  T
Q  346 gtctct 351  Q
    ||||||    
T  16979100 gtctct 16979105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 40612462 - 40612413
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40612462 caacctactgttaggtccctgactgtgcatacttactatcagttaggtcc 40612413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 4594176 - 4594118
Alignment:
Q  284 gatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactt 343  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  4594176 gatccctgactcaggattaaatacaaataagtc-atgactctgcacttccattatcactt 4594118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 488 - 529
Target Start/End: Complemental strand, 545842 - 545801
Alignment:
Q  488 tactgttaggtccctgactgtgcatacttactatcagttagg 529  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  545842 tactgttaggtccctgactgtgcatacttactatcagttagg 545801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 351
Target Start/End: Original strand, 13483029 - 13483133
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||||| |||| || | |||||  ||| |||| | ||||||||| ||||||||| ||| |||||||| ||||||||||| ||||||||||||     
T  13483029 tcactttagtccc-gactctgtatctcgcattcagataggttcctgactcatgattaaatataaagaagtctcttactctgcactttcgttatcactttt 13483127  T
Q  346 gtctct 351  Q
    ||||||    
T  13483128 gtctct 13483133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 14890966 - 14890917
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  14890966 caacttattgttaggtccctgactgtgcatatttactatcagttaggtcc 14890917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 28590022 - 28590071
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  28590022 caacctactgttaggtctctgactgtgcatacttactatcagttaggtcc 28590071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 32555514 - 32555434
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatc 474  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||| |||||| | ||| ||||| |||||| ||||||||    
T  32555514 ttatgctgacaaggagtatgaggtgtcacatggactaaagtgaaagtagaaaattgtcac-ttggttcctgaaccgaaaatc 32555434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 40611579 - 40611628
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  40611579 caacttagtgttaggtccctgactgtacatacttactatcagttaggtcc 40611628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 2464989 - 2465037
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  2464989 caacctactgttaggtccctgactgtgcatatttactatcagttaggtc 2465037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 484 - 528
Target Start/End: Complemental strand, 4593912 - 4593868
Alignment:
Q  484 aacttactgttaggtccctgactgtgcatacttactatcagttag 528  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  4593912 aacttaatgttaggtccctgactgtgcatacttactatcagttag 4593868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 456 - 532
Target Start/End: Complemental strand, 31946886 - 31946810
Alignment:
Q  456 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||| ||||||||||||| ||||| |||||||| ||||||||| |||||| || ||||||||| ||| ||||||||    
T  31946886 ggtccttgaatcgaaaatcaatatcatcaacttattgttaggtcactgactctgtatacttactgtcatttaggtcc 31946810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 480
Target Start/End: Original strand, 2464820 - 2464891
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| |||||    
T  2464820 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatc 2464891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 483 - 534
Target Start/End: Complemental strand, 2466577 - 2466526
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcctt 534  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  2466577 caacttattgttaggtctctgactgtgcatacttactatcagttatgtcctt 2466526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 483 - 534
Target Start/End: Complemental strand, 32641546 - 32641495
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcctt 534  Q
    |||| ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  32641546 caacctactgttaggtccctaactgtgcatacttattatcagttaggtcctt 32641495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 14881010 - 14881056
Alignment:
Q  301 taaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  14881010 taaacacaaataagtccctgactctgcacttccgttatcactttagt 14881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 278 - 385
Target Start/End: Original strand, 28589739 - 28589846
Alignment:
Q  278 cacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgat 377  Q
    ||||||| |||||||||||  ||||||||||||||  | | ||||| || |||||||||| || ||||||||||| |||||||       ||||||||||    
T  28589739 cacataggtccctgactcataattaaatacaaatacatttttgactttgtacttccgttaccattttagtctctgacgttaaaaaaatctgttaagtgat 28589838  T
Q  378 gatgtggc 385  Q
    ||||||||    
T  28589839 gatgtggc 28589846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 8074770 - 8074819
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  8074770 caacctactgttagctccctgactgtgcatacttactataagttaggtcc 8074819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 528
Target Start/End: Complemental strand, 28590916 - 28590872
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttag 528  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  28590916 caacttactgttag-tccctgactgtgcatacttactatcagttag 28590872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 32640607 - 32640656
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||||    
T  32640607 caacttactgttaggtccttgattgtgcatacttactatcagttatgtcc 32640656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 9537355 - 9537403
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  9537355 caacttactattaggtccttgactgtgcatacttactatcatttaggtc 9537403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 13483275 - 13483174
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcagg----attaaatacaaataagtctctgactctgcacttccgttatcac 341  Q
    |||| ||||||  ||||| |||||||||||| ||| ||| ||  ||||||| |    |||||||||||| |||||||||||| |||||||||||||||||    
T  13483275 tcacgttagtctttgactctgcacctcgctgccacgtaggtctttgactcatgattaattaaatacaaacaagtctctgactttgcacttccgttatcac 13483176  T
Q  342 tt 343  Q
    ||    
T  13483175 tt 13483174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 28591085 - 28591029
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  28591085 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaa 28591029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 528
Target Start/End: Complemental strand, 23773344 - 23773301
Alignment:
Q  485 acttactgttaggtccctgactgtgcatacttactatcagttag 528  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||    
T  23773344 acttattgttaggtccctgactgtgcatacttactattagttag 23773301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 28782773 - 28782706
Alignment:
Q  134 ataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 201  Q
    ||||||||||||||||| || |||||| || |||| ||||||||||||| || ||||||| |||||||    
T  28782773 ataaatagaaataatttgttaaaaaattgtaaaaagtgttgaattcaacattttaaaagtaaaaaagt 28782706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 8074601 - 8074671
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||| || || ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  8074601 tatgaggtgtcacaggtaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 8074671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 8075805 - 8075735
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| |||||||  |||| |||||||||||||||||||  |||||||||||||||| | |||||| ||||    
T  8075805 tatgaggtgtcacaaggaccaaagtgaaagtcgaaaatgatcactttggtccctgaaccaaaaatcaatat 8075735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 25590581 - 25590651
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||| ||||| | |||||| ||||    
T  25590581 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatat 25590651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 528
Target Start/End: Original strand, 25590752 - 25590794
Alignment:
Q  486 cttactgttaggtccctgactgtgcatacttactatcagttag 528  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  25590752 cttattgttaggtccctaactgtgcatacttactatcagttag 25590794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 40611411 - 40611481
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||| |||||||||| | |||||| ||||    
T  40611411 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcacttgggtccctgaaccaaaaatcaatat 40611481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 479
Target Start/End: Original strand, 4593025 - 4593081
Alignment:
Q  423 gggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  4593025 gggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 4593081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 10317315 - 10317259
Alignment:
Q  130 gaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttc 186  Q
    ||||| ||||||||| ||| | |||||||||| |||||| |||||||||||||||||    
T  10317315 gaacaaaaatagaaagaatgtgttgaaaaatgatgaaaagtgttgaattcaactttc 10317259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 479
Target Start/End: Original strand, 32640445 - 32640509
Alignment:
Q  415 gtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||||| ||||| ||||||||||| |||||||| ||||||||||| |||| | |||||| ||||    
T  32640445 gtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatat 32640509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 14889920 - 14889990
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||  ||||| ||||| ||||| |||||||| |||||||||||||||| | |||||| ||||    
T  14889920 tatgaggtgtcatagggaccaaagtaaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 14889990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 14891119 - 14891049
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| |||||||  |||| ||||||| ||| |||||||| |||||| ||||||||||| |||||| ||||    
T  14891119 tatgaggtgtcacaaggaccaaagtgatagtagaaaatggtcactttagtccctgaatcaaaaatcaatat 14891049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 531
Target Start/End: Complemental strand, 23773232 - 23773186
Alignment:
Q  485 acttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    ||||| |||||||||||||||| ||||| |||||||| |||||||||    
T  23773232 acttattgttaggtccctgactatgcatgcttactattagttaggtc 23773186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 40612631 - 40612561
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| |||||||  |||| ||||||||||| ||||||||  ||||||||||||||| | |||||| ||||    
T  40612631 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcaatat 40612561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 531
Target Start/End: Original strand, 14890096 - 14890137
Alignment:
Q  490 ctgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    ||||||||||||||| |||||||||||||||| |||| ||||    
T  14890096 ctgttaggtccctgattgtgcatacttactattagtttggtc 14890137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 480
Target Start/End: Original strand, 18004799 - 18004880
Alignment:
Q  399 tgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||||||  | ||| ||||||| | ||||||| ||||||| |||||| | |||||||||||||||||| ||| || |||||    
T  18004799 tgacaaggcatgtgaggtgtcacagagactaaaatgaaagtagaaaatagtcactttggtccctgaatcaaaattcaatatc 18004880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 24900447 - 24900410
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacata 283  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  24900447 tcactttggtccctgactctgcacctcgctgtcacata 24900410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 483 - 527
Target Start/End: Complemental strand, 8075638 - 8075595
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagtta 527  Q
    |||||||||||||||||| |||||||||||||| || ||||||||    
T  8075638 caacttactgttaggtcc-tgactgtgcatactaaccatcagtta 8075595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 479
Target Start/End: Original strand, 28589864 - 28589920
Alignment:
Q  423 gggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||| ||||| |||||||| |||||||||||||||| | |||||| ||||    
T  28589864 gggaccaaagtaaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 28589920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 480
Target Start/End: Original strand, 34173418 - 34173502
Alignment:
Q  396 tgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||||||||| | || | || |||| ||||||||| ||||||| |||||||  |||||||||| ||||| | |||||| |||||    
T  34173418 tgctgacaaggtgcataaggtatcacagggactaaactgaaagtagaaaatgatcactttggtctctgaaccaaaaatcaatatc 34173502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 5e-48; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 265 - 532
Target Start/End: Complemental strand, 41754891 - 41754635
Alignment:
Q  265 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnn 364  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||| |||||||||||| ||||||| | ||| |||||||        
T  41754891 tgcacctcgctgtcacatagatctctgactcaggattaaatacaaacaagttcctgactctacacttccgttattactttagcc-ctgccgttaaaaaaa 41754793  T
Q  365 nnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctga 464  Q
       |||||||||||||||||||| |         ||||||||||||||| ||||||| |||| ||||||||||||  ||||||| ||||||||||| |||    
T  41754792 ct-gttaagtgatgatgtggcacgt---------tgacaaggagtatgatgtgtcacagggattaaagtgaaagtaaaaaatggtcactttggtccatga 41754703  T
Q  465 atcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||| |||||  ||| |||||||||| |||| |||| || ||||||| | ||||||||||||    
T  41754702 atcgaaaatcaatatcaacaatttactgttagatccccgactatgtatacttattgtcagttaggtcc 41754635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 32898560 - 32898421
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32898560 tcactttagtccctgactctgcaactcactgtcacataggtccctgacttaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 32898461  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||| ||| |||||||       ||||||||||||||||||    
T  32898460 gtccctgacgttaaaaaaatctgttaagtgatgatgtggc 32898421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 397 - 532
Target Start/End: Original strand, 41754127 - 41754262
Alignment:
Q  397 gctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaacttactgttag 496  Q
    ||||||||||||||||||||||||  |||||||||||||||||  ||||| | ||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  41754127 gctgacaaggagtatgacgtgtcatagggactaaagtgaaagtaaaaaatagtcactttggtccctgaatcgaaaatcaatatcctcaatttactgttag 41754226  T
Q  497 gtccctgactgtgcatacttactatcagttaggtcc 532  Q
     | |||||||||| ||||||||| ||||||||||||    
T  41754227 atacctgactgtgtatacttactctcagttaggtcc 41754262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 294 - 479
Target Start/End: Original strand, 45476218 - 45476403
Alignment:
Q  294 tcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggct 393  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||       |||||||||||||||||| | ||  |    
T  45476218 tcagaattaaatacaaataagtctctgactctgcacttctgttatcactttagtctctcccgttaaaaaaatctgttaagtgatgatgtggcgcatgtgt 45476317  T
Q  394 tatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||||||| |||| || || ||||||| | ||| ||||||||||| |||||| | |||||||||||||||| | |||||| ||||    
T  45476318 tatgctgacgaggattaagaggtgtcacagagaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatat 45476403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 250 - 385
Target Start/End: Original strand, 35177407 - 35177542
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 349  Q
    |||||||||| | | |||| ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  35177407 tttagtccctaattctgcagctcgctgtcacataggtccctgactccggattaaatacaaataagtccctgactctgcacttccgttatcactttagtcc 35177506  T
Q  350 ctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||| |||||||       ||||||||||||||||||    
T  35177507 ctgacgttaaaataatctgttaagtgatgatgtggc 35177542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 35178919 - 35178805
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  35178919 tcactttggtccctgactctgcacatcgctgtcatattggtccctgactcaggattaaatacaaataagtccctgattctgcacttccgttatcacttta 35178820  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| ||| |||||||    
T  35178819 gtccctgacgttaaa 35178805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 308 - 479
Target Start/End: Complemental strand, 45476616 - 45476445
Alignment:
Q  308 aaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaagga 407  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||||||||       |||||||||||||||||| | || |||||||||||||| |    
T  45476616 aaataagtcgctgactctgcacttctcttatcactttagtctctgtcgttaaaaaaatatgttaagtgatgatgtggcgcatgtcttatgctgacaagaa 45476517  T
Q  408 gtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    |||||| ||||||   |||| ||||| ||||| |||||||| |||||| ||||||||| | |||||| ||||    
T  45476516 gtatgatgtgtcatatggaccaaagtaaaagtagaaaatggtcactttagtccctgaaccaaaaatcaatat 45476445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 248 - 464
Target Start/End: Original strand, 31074004 - 31074220
Alignment:
Q  248 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    |||||| ||||||||| |||| || ||||||||| |  || ||||||| ||||||||| ||||  ||| ||||| | |||||||| ||||||||||||||    
T  31074004 actttaatccctgactctgcatcttgctgtcacaaaagtctctgactctggattaaatgcaaagtagtttctgaatgtgcacttctgttatcactttagt 31074103  T
Q  348 ctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatg 447  Q
    |||||   |||||       ||||| |||||||||||||  ||  ||||||| |||||| |||||| ||||||||||||||||||||||| | |||||||    
T  31074104 ctctggaattaaataattttgttaactgatgatgtggcaaatgttttatgctaacaaggggtatgaggtgtcacggggactaaagtgaaaatagaaaatg 31074203  T
Q  448 gccactttggtccctga 464  Q
      |||||||||||||||    
T  31074204 atcactttggtccctga 31074220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 1953084 - 1952946
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | |||| |||| ||||| ||||||| |||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  1953084 tcactttagtccctgattctgcagctcgttgtcatatagatctctgact-aggattacatacaaataagtctatgactctgtacttccgttatcacttta 1952986  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||||||| |||||||       ||||||||||||||||||    
T  1952985 gtctctgacgttaaataaatctgttaagtgatgatgtggc 1952946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 267 - 360
Target Start/End: Complemental strand, 5965536 - 5965443
Alignment:
Q  267 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 360  Q
    ||||||| ||||||| |  ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  5965536 cacctcgttgtcacaaatgtccctgactcaggattaaatacaaagaagtctttgactctgcacttccgttatcactttagtctctgacgttaaa 5965443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 246 - 480
Target Start/End: Complemental strand, 5738138 - 5737904
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||| ||||||| ||||  ||| ||| |||||| ||| ||||||| ||||||||||||| ||||   |||||||| |||||||||||||||| |    
T  5738138 tcactttagttcctgactttgcatatcgttgtgacataggtccatgactcaagattaaatacaaagaagttattgactctgtacttccgttatcacttca 5738039  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    |||| || |||||||       |||||||||||||||  ||| |||  |||| ||||| |   ||||| |||||||  |||||||||| |||||  ||||    
T  5738038 gtctttggcgttaaataattctgttaagtgatgatgtaacacatggtatatgatgacatgacatatgaggtgtcacatggactaaagtaaaagtaaaaaa 5737939  T
Q  446 tggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||| |||||||||| || |||| |||||| |||||    
T  5737938 tggtcactttggtctctaaatcaaaaatcaatatc 5737904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 249 - 473
Target Start/End: Original strand, 33314872 - 33315093
Alignment:
Q  249 ctttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    |||| |||||| ||| |||||||||||||| || || || |||||||| |||||||||||||||||||   || |||  ||||| ||||||||||||||     
T  33314872 ctttggtcccttactttgcacctcgctgtctcaaaggtctctgactcaagattaaatacaaataagtcatcgattctatacttcggttatcactttagtt 33314971  T
Q  349 tctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatgg 448  Q
     ||||   ||||       |||||||||||| ||| ||| ||  || |||||||||||||||||| |||||||  |||| ||||||||||| |||||| |    
T  33314972 gctgt---taaaaaattctgttaagtgatgaagtgacacatgttttttgctgacaaggagtatgaggtgtcacatggaccaaagtgaaagtagaaaatag 33315068  T
Q  449 ccactttggtccctgaatcgaaaat 473  Q
     ||||||||||| ||||| ||||||    
T  33315069 tcactttggtccgtgaattgaaaat 33315093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 43819643 - 43819551
Alignment:
Q  117 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttc 210  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||  |||||||    
T  43819643 cattggttaagag-aacatgaatagaaataatttgttgaaaaatgatgaaaaatgttgaattcaactttctaaaagtcaaaaagttgtaatttc 43819551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 7207310 - 7207194
Alignment:
Q  119 ttggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttccgggtgca 218  Q
    ||||||||||| |||||||||| ||||||||| |||||||||| |||||| |||||||||||| |||||||||||||||||||  ||| ||||   ||||    
T  7207310 ttggttaagag-aacataaatataaataatttgttgaaaaatgatgaaaagtgttgaattcaaatttctaaaagttaaaaagttgtaa-ttcccaatgca 7207213  T
Q  219 aaattattacttttagttt 237  Q
    |||||| ||||||||||||    
T  7207212 aaattactacttttagttt 7207194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 24067074 - 24066973
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    |||||||||||||| | ||||| |||||||  |||||||||| ||||||||| |||  |||||||||||| ||||||||||||| |||||||||||||||    
T  24067074 taaagagtgtccttggggcatttgttaagaa-aacataaatataaataatttgttgggaaatggtgaaaagtgttgaattcaaccttctaaaagttaaaa 24066976  T
Q  199 agt 201  Q
    |||    
T  24066975 agt 24066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 246 - 460
Target Start/End: Original strand, 30134574 - 30134788
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||| | ||| ||||||||||||||||| || ||||  ||||| ||||||||||||| |||| | |||||||||||||| ||||||||||||    
T  30134574 tcactttagtccttaactctgcacctcgctgtcacaaaggtcccctactcatgattaaatacaaagaagtgtgtgactctgcacttctgttatcacttta 30134673  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
     | |||  ||||| |       |||| ||||||||||| ||| ||  ||| | ||||| |   | ||| ||||||| | ||||||||||||||| |||||    
T  30134674 atatctaacgttatataattatgttaggtgatgatgtgacacatgttttacgatgacatgtcatttgatgtgtcacagagactaaagtgaaagtagaaaa 30134773  T
Q  446 tggccactttggtcc 460  Q
    | | |||||||||||    
T  30134774 ttgtcactttggtcc 30134788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 41754006 - 41754097
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgtta 337  Q
    |||||||||||||||  | ||||||| |||||||||||| ||||||||||||||||||||| ||| ||||| |||||||| ||||| |||||    
T  41754006 tcactttagtccctggttctgcaccttgctgtcacataggtccctgactcaggattaaatataaacaagtccctgactctacactttcgtta 41754097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 480
Target Start/End: Original strand, 28524810 - 28525000
Alignment:
Q  290 tgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcactt 389  Q
    |||||||||||||||||||||  | ||  ||| | |||||||||||||||| ||||||||||| |||||||       ||||| |||||||||||||       
T  28524810 tgactcaggattaaatacaaagtaatccttgaatgtgcacttccgttatcattttagtctctgacgttaaataattttgttaactgatgatgtggcaaag 28524909  T
Q  390 ggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
       ||||| |||||| |||||||| ||||||   ||||||||||||||||  ||||| | || |||||||| |||| |||||||| |||||    
T  28524910 attttatgttgacaaagagtatgaagtgtcagatggactaaagtgaaagtaaaaaattgtcattttggtccgtgaaccgaaaatcaatatc 28525000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 10407699 - 10407562
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| |||| | |||| ||| ||||||||||| ||  ||||| ||||||||| |||||||||||  | ||| |||||||||||||||||||||    
T  10407699 tcactttagtctctgattctgcagctcactgtcacataggtcattgacttaggattaaacacaaataagtccataactttgcacttccgttatcacttta 10407600  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtg 383  Q
    ||  ||| |||||||       ||||||||||||||||    
T  10407599 gttcctgacgttaaaaaaatctgttaagtgatgatgtg 10407562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 456 - 532
Target Start/End: Complemental strand, 41754639 - 41754563
Alignment:
Q  456 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||||||| |  ||||||||| ||||||||||||    
T  41754639 ggtccctgaatcgaaaatcaatatcctcaacttacttttaggtccctgactatatatacttactgtcagttaggtcc 41754563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 617617 - 617525
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 193  Q
    |||||||||||||| |  |||| |||||||| |||||||||| ||||||||| || ||||||||||| ||||||| |||||||||||||||||||    
T  617617 taaagagtgtccttggaacattcgttaagag-aacataaataaaaataatttgttaaaaaatggtgagaaatgtt-aattcaactttctaaaagt 617525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 624010 - 623918
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 193  Q
    |||||||||||||| |  |||| |||||||| |||||||||| ||||||||| || ||||||||||| ||||||| |||||||||||||||||||    
T  624010 taaagagtgtccttggaacattcgttaagag-aacataaataaaaataatttgttaaaaaatggtgagaaatgtt-aattcaactttctaaaagt 623918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 467
Target Start/End: Original strand, 28619028 - 28619219
Alignment:
Q  277 tcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtga 376  Q
    ||||| || |||||||| || ||||||||||||| || ||  ||||||||||||| |||||||||||||||||| | |||||||       |||||||||    
T  28619028 tcacaaaggtccctgacccatgattaaatacaaagaaatcattgactctgcactttcgttatcactttagtctcggccgttaaataattttgttaagtga 28619127  T
Q  377 tgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcg-aaaatggccactttggtccctgaatc 467  Q
    ||||||| ||| ||  ||| | ||||| ||  | ||| || |||  |||||||||||||| || | ||||||| ||||||||||||| ||||    
T  28619128 tgatgtgtcacatgttttacgatgacatggcatttgatgtatcatagggactaaagtgaatgtagaaaaatggtcactttggtccctcaatc 28619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 42543095 - 42542994
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    ||||||||| |||| | ||||||||||| | ||||||||||| ||| ||||| || |||||| ||||||| |||||||||||||| ||||||||| ||||    
T  42543095 taaagagtgcccttggggcattggttaa-atgaacataaataaaaacaatttgtttaaaaatagtgaaaagtgttgaattcaactctctaaaagtaaaaa 42542997  T
Q  199 agt 201  Q
    |||    
T  42542996 agt 42542994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 10406510 - 10406559
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10406510 caacttattgttaggtccctgactgtgcatacttactatcagttaggtcc 10406559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 28619620 - 28619554
Alignment:
Q  286 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctg 352  Q
    ||||||||||||||||||||||||| | |||  ||||||||||||||  ||||||||||||||||||    
T  28619620 tccctgactcaggattaaatacaaagaggtcattgactctgcacttctattatcactttagtctctg 28619554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 491 - 532
Target Start/End: Complemental strand, 28526342 - 28526301
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28526342 tgttaggtccctgactgtgcatacttactatcagttaggtcc 28526301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 30134855 - 30134904
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  30134855 caacttactgttaggtctctgattgtgcatacttactatcagttaggtcc 30134904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 32898248 - 32898199
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  32898248 caacctactgttaggtctctgactgtgcatacttactatcagttaggtcc 32898199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 341
Target Start/End: Original strand, 1951970 - 1952045
Alignment:
Q  265 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcac 341  Q
    ||||||| ||| | |||||||||| |||||||||||||||||||||||||| |||||||||||| || | |||||||    
T  1951970 tgcaccttgctattacatagatcc-tgactcaggattaaatacaaataagtttctgactctgcattttcattatcac 1952045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 472
Target Start/End: Original strand, 24198966 - 24199164
Alignment:
Q  270 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngt 369  Q
    |||||||||||| || ||  ||| |||||||||||||||||  | ||  ||| | ||||||||||||||||||||||||| | ||||| ||       ||    
T  24198966 ctcgctgtcacaaaggtctttgattcaggattaaatacaaagtaatcattgaatgtgcacttccgttatcactttagtctttttcgttgaataattatgt 24199065  T
Q  370 taagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcga 469  Q
    |    ||||| || |||  ||  |||||||||||||| |||||| ||||||| |  ||||||||||||||  ||||||  || |||||||||||||||||    
T  24199066 t----gatgacgtagcaaatgttttatgctgacaaggggtatgaggtgtcacagatactaaagtgaaagtaaaaaatgatcattttggtccctgaatcga 24199161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 589913 - 589998
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttc 186  Q
    |||||||||||||| |  |||| |||||||| |||||||||| ||||||||| || ||||||||||| ||||||| ||||||||||||    
T  589913 taaagagtgtccttggaacattcgttaagag-aacataaataaaaataatttgttaaaaaatggtgagaaatgtt-aattcaactttc 589998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 383
Target Start/End: Original strand, 5736879 - 5736987
Alignment:
Q  275 tgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagt 374  Q
    ||||||||| ||| |||| |||| |||||||||||| || ||||| ||||| ||||| |||||||||||||||| ||  |||||||       |||||||    
T  5736879 tgtcacataaatctctgattcagaattaaatacaaagaaatctctaactctacactttcgttatcactttagtccctcacgttaaataattttgttaagt 5736978  T
Q  375 gatgatgtg 383  Q
    |||||||||    
T  5736979 gatgatgtg 5736987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 474
Target Start/End: Complemental strand, 12637833 - 12637648
Alignment:
Q  286 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||||| |||||||||| ||||||||  |||  |||| | |||||||||||||||||||||||| | | | |||||        | || ||||||||||||    
T  12637833 tccctaactcaggattgaatacaaagtagttcctgaatgtgcacttccgttatcactttagtccccgacattaaatattt---tcaactgatgatgtggc 12637737  T
Q  386 acttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatc 474  Q
    |   |  |||| || ||||||||||||| |||||||  |||||||||||||||| ||| |||  ||||||||||||||||  |||||||    
T  12637736 aaaggttttatactaacaaggagtatgatgtgtcacatggactaaagtgaaagtagaatatgatcactttggtccctgaactgaaaatc 12637648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 485 - 532
Target Start/End: Complemental strand, 28006377 - 28006330
Alignment:
Q  485 acttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  28006377 actttctgttaggtccctgattgtgcatacttactatcagttaggtcc 28006330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 485 - 532
Target Start/End: Complemental strand, 28063680 - 28063633
Alignment:
Q  485 acttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  28063680 actttctgttaggtccctgattgtgcatacttactatcagttaggtcc 28063633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 480
Target Start/End: Complemental strand, 31075392 - 31075172
Alignment:
Q  258 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtt 357  Q
    |||||| ||||||||| ||| ||| || | | || ||||| ||||||||||||  |||| |||| | || ||| ||||||||||||||||| ||| ||||    
T  31075392 ctgactctgcacctcgttgttacaaaggttcttggctcagcattaaatacaaaatagtc-ctgaatatgtactcccgttatcactttagtcactgacgtt 31075294  T
Q  358 aaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttgg 457  Q
    |||        |||| |||||| ||| ||   |  ||||| |||||||||||| || |||||||  |||||||| ||||||| |||| ||| ||||||||    
T  31075293 aaataattatattaactgatgacgtgacaaaggttttatggtgacaaggagtacgaggtgtcacaaggactaaa-tgaaagtagaaagtggtcactttgg 31075195  T
Q  458 tccctgaatcgaaaatcgatatc 480  Q
    ||||||||  ||||||| |||||    
T  31075194 tccctgaactgaaaatcaatatc 31075172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 491 - 532
Target Start/End: Original strand, 35177721 - 35177762
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  35177721 tgttaggtccctgactatgcatacttactatcagttaggtcc 35177762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 473
Target Start/End: Complemental strand, 9626429 - 9626349
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 473  Q
    |||||||||||| |||||||| |||||||  | |||||||||||||| |||| || |||||||  |||||||| |||||||    
T  9626429 ttatgctgacaaagagtatgaggtgtcacatgaactaaagtgaaagtagaaattgaccactttaatccctgaaccgaaaat 9626349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 28005359 - 28005415
Alignment:
Q  254 gtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaa 310  Q
    |||||||||| | ||||||| ||||||| |||||||||||||||||| |||||||||    
T  28005359 gtccctgactctacacctcgttgtcacaaagatccctgactcaggatcaaatacaaa 28005415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 28062662 - 28062718
Alignment:
Q  254 gtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaa 310  Q
    |||||||||| | ||||||| ||||||| |||||||||||||||||| |||||||||    
T  28062662 gtccctgactctacacctcgttgtcacaaagatccctgactcaggatcaaatacaaa 28062718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 485
Target Start/End: Complemental strand, 32898417 - 32898341
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaa 485  Q
    ||||| |||||||  |||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||| ||||    
T  32898417 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatcctcaa 32898341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 385
Target Start/End: Original strand, 10406269 - 10406353
Alignment:
Q  301 taaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    |||||| ||| |||||||||||||||||||||  |||||||||||||| |||  ||||||       ||||||||||||||||||    
T  10406269 taaataaaaacaagtctctgactctgcacttctattatcactttagtccctggtgttaaaaaaatctgttaagtgatgatgtggc 10406353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 491 - 534
Target Start/End: Original strand, 31074363 - 31074406
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcctt 534  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  31074363 tgttaggtccctgactatgcatacttactatcagttagatcctt 31074406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 39138632 - 39138569
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttg 456  Q
    |||||||||||| | |||||| |||||||  |||||||||||||||| |||||||| |||||||    
T  39138632 ttatgctgacaaagtgtatgaggtgtcacaaggactaaagtgaaagtagaaaatggtcactttg 39138569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 1952942 - 1952872
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||  ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  1952942 tatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 1952872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 12221068 - 12221022
Alignment:
Q  163 tgaaaaatgttgaattcaactttctaaaagttaaaaagtaataattt 209  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||    
T  12221068 tgaaaaatgttgaattcaactttttaaaagtttaaaagttataattt 12221022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 535
Target Start/End: Original strand, 28062997 - 28063039
Alignment:
Q  493 ttaggtccctgactgtgcatacttactatcagttaggtcctta 535  Q
    |||||||||| ||||||||||||||| ||||||||||||||||    
T  28062997 ttaggtccctaactgtgcatacttacaatcagttaggtcctta 28063039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 41121160 - 41121214
Alignment:
Q  289 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactt 343  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||  |||||||||    
T  41121160 ctgactcatgattaaatacaaagaagtctctgactatgcacttctattatcactt 41121214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 59548 - 59624
Alignment:
Q  236 ttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaa 310  Q
    ||||||||||  |||||||||||||||||| | |||||||||||||| |   ||||||||||||||| || ||||||    
T  59548 ttgagtaaatagtcactttagtccctgactttacacctcgctgtcactttagtccctgactcaggataaactacaaa 59624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 5965225 - 5965176
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| ||||| |||| |||||||||||||||||||||| ||||||||    
T  5965225 caacttagtgttaagtccatgactgtgcatacttactatcaattaggtcc 5965176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 35178609 - 35178560
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  35178609 caacttaccgttaggtccctcactgtgcatatttactatcaattaggtcc 35178560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 27737704 - 27737803
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    ||||||||||| || |  |||| |||||||| ||||||| |||||||||| | || ||||||  | |||| ||||||||| |||||||||||||| ||||    
T  27737704 taaagagtgtctttggaacattagttaagag-aacataattagaaataatatgttaaaaaataattaaaagtgttgaatttaactttctaaaagtcaaaa 27737802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 533
Target Start/End: Original strand, 28005694 - 28005734
Alignment:
Q  493 ttaggtccctgactgtgcatacttactatcagttaggtcct 533  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  28005694 ttaggtccctaactgtgcatacttacaatcagttaggtcct 28005734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 28006564 - 28006492
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||||||||| ||||||||| || ||||  |||||||||||||| | |||| ||| |||||||||| |||||    
T  28006564 ttatgctgacagggagtatgatgtatcacaaggactaaagtgaaaatagaaagtggtcactttggtcactgaa 28006492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 28063867 - 28063795
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||||||||| ||||||||| || ||||  |||||||||||||| | |||| ||| |||||||||| |||||    
T  28063867 ttatgctgacagggagtatgatgtatcacaaggactaaagtgaaaatagaaagtggtcactttggtcactgaa 28063795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 28619336 - 28619288
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    ||||||||| ||||||| || |||||||||||||||||||| |||||||    
T  28619336 caacttactattaggtctctaactgtgcatacttactatcatttaggtc 28619288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 8210213 - 8210174
Alignment:
Q  160 tggtgaaaaatgttgaattcaactttctaaaagttaaaaa 199  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  8210213 tggtgaaaaatgatgaattcaactttttaaaagttaaaaa 8210174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 4308880 - 4308834
Alignment:
Q  152 ttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    |||||||||||| ||||||| |||||| |||||| ||||||||||||    
T  4308880 ttgaaaaatggtaaaaaatgatgaatttaactttataaaagttaaaa 4308834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 36032869 - 36032947
Alignment:
Q  401 acaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    |||||| |||||| ||||||| ||||| ||||||||||| |||||| | || || ||||||||||  |||||| |||||    
T  36032869 acaaggggtatgaggtgtcacagggacgaaagtgaaagtagaaaattgtcaattaggtccctgaagagaaaattgatat 36032947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 360
Target Start/End: Original strand, 8569437 - 8569530
Alignment:
Q  267 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 360  Q
    ||||||||| ||||| || ||  ||||||| |||||||||||||  ||| | ||| | ||||||| |||||||| ||||||| ||| |||||||    
T  8569437 cacctcgctctcacaaaggtctttgactcatgattaaatacaaagtagtttatgaatgtgcactttcgttatcagtttagtccctgacgttaaa 8569530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 485
Target Start/End: Original strand, 9625380 - 9625437
Alignment:
Q  428 taaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaa 485  Q
    |||||||||||| |||||||| |||||| || | ||||||||||||| ||||| ||||    
T  9625380 taaagtgaaagtagaaaatggtcactttagttcgtgaatcgaaaatcaatatcctcaa 9625437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 528
Target Start/End: Original strand, 28525126 - 28525163
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttag 528  Q
    ||||||||| || |||||||||||||||||||||||||    
T  28525126 tgttaggtctctaactgtgcatacttactatcagttag 28525163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 527
Target Start/End: Complemental strand, 10407379 - 10407343
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagtta 527  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  10407379 tgttaggtccgtgactgttcatacttactatcagtta 10407343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 481
Target Start/End: Complemental strand, 28526512 - 28526424
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 481  Q
    ||||| ||||||||| ||||| ||||||  | ||||||||||||| | |||||||  || |||||| | |||| |||||||| ||||||    
T  28526512 ttatggtgacaaggaatatgaggtgtcatagtgactaaagtgaaaatagaaaatgatcattttggttcttgaaccgaaaatcaatatct 28526424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 527
Target Start/End: Original strand, 36033038 - 36033074
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagtta 527  Q
    |||||||| |||||||||||| |||||||||||||||    
T  36033038 tgttaggttcctgactgtgcacacttactatcagtta 36033074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 86)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 48646057 - 48646171
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  48646057 tcactttggtccctgactatgcacctcgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactctacacttccgttatcacttta 48646156  T
Q  346 gtctctgtcgttaaa 360  Q
    |||||||||||||||    
T  48646157 gtctctgtcgttaaa 48646171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 248 - 385
Target Start/End: Complemental strand, 10899186 - 10899049
Alignment:
Q  248 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10899186 actttggtccctgactctgcacctcgctgtcacatagatccttgacccaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 10899087  T
Q  348 ctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    | ||| |||||||       ||||||||||||||||||    
T  10899086 ccctgacgttaaaaaaatctgttaagtgatgatgtggc 10899049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 246 - 385
Target Start/End: Original strand, 35727707 - 35727845
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||  ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  35727707 tcactttgatccctgactctgcacctcgctgtcacataggtccctgactcaggattaaatataaataagtctctgactctgcacatccgttatcacttta 35727806  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||| ||| |||||||       ||||||||||||||||||    
T  35727807 gtc-ctgacgttaaaaatctctgttaagtgatgatgtggc 35727845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 44333147 - 44333243
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcact 342  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44333147 tcactttggtccctgactctgcacctcgctgtcacataggtccctgactcatgattaaatacaaataagtctctgactctgcacttccgttatcact 44333243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 246 - 382
Target Start/End: Original strand, 7258283 - 7258419
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| | ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7258283 tcactttggtccctgactctacacctcgttgtcacataggtccctaactcaggattaaatacaaataagtctctgactctgcacttctgttatcacttta 7258382  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgt 382  Q
    ||| ||| |||||||       |||||||||||||||    
T  7258383 gtccctgacgttaaaaaaatctgttaagtgatgatgt 7258419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 48788787 - 48788673
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||  ||| ||||| |||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  48788787 tcactttgatccttgactttgcacctcgctgtcacataggtccctgactcataattaaatataaataagtctctgactctgcacttccgttatcacttta 48788688  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||||| |||||||    
T  48788687 gtctctgacgttaaa 48788673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 246 - 479
Target Start/End: Original strand, 46286511 - 46286744
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||||| | || |||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46286511 tcactttagtccctgactcttcatctcgctgttagaaaggtccctgactcaggattaaatacaaataagtctctgactctgcacttctgttatcacttta 46286610  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
     |||||  |||||||       ||||||||||||| |||| | |  ||||| || ||||| ||||||| |||| ||   ||| ||| ||||||| |||||    
T  46286611 atctctaccgttaaaaaaatatgttaagtgatgatatggcgcatatcttatactcacaagaagtatgatgtgttacattgaccaaaatgaaagtagaaaa 46286710  T
Q  446 tggccactttggtccctgaatcgaaaatcgatat 479  Q
    | | ||||||| ||| |||| | |||||| ||||    
T  46286711 tagtcactttgatccttgaaccaaaaatcaatat 46286744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 246 - 347
Target Start/End: Original strand, 43457465 - 43457566
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | |||| ||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  43457465 tcactttagtccctgattctgcagctcgctgtcgcataggtccctgactcaggattaaatacaaataagtccccgactctgcacttccgttatcacttta 43457564  T
Q  346 gt 347  Q
    ||    
T  43457565 gt 43457566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 258 - 473
Target Start/End: Complemental strand, 8048887 - 8048672
Alignment:
Q  258 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtt 357  Q
    |||||| |||||||||||| |||| || || |||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |  ||||    
T  8048887 ctgactctgcacctcgctgacacaaaggtctctgactcaagattaaatacaaagaagtctccgactctgcacttccgttatcactttaatctttaacgtt 8048788  T
Q  358 aaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttgg 457  Q
    |||        ||||||||||||||| ||| ||   || | |||||     ||||| |||||||  |||||||||||||||| |||||||| ||||||||    
T  8048787 aaataattctattaagtgatgatgtgtcacatgttatacgatgacataacatatgatgtgtcacatggactaaagtgaaagtagaaaatggtcactttgg 8048688  T
Q  458 tccctgaatcgaaaat 473  Q
    |||||||| |||||||    
T  8048687 tccctgaaccgaaaat 8048672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 8374926 - 8375036
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 349  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||| |||||||||||| |||| ||||| | |||||||||||||||||||||||||    
T  8374926 tttagtccctgactctgcacctcgctgtcacataggtctctgactcagaattaaatacaaaaaagtttctgattttgcacttccgttatcactttagtct 8375025  T
Q  350 ctgtcgttaaa 360  Q
     || |||||||    
T  8375026 ttgacgttaaa 8375036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 30925123 - 30925009
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||| ||||||| | |||| ||| | ||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  30925123 tcactttaatccctgattctgcagctcccagtcacataggtccttgactcaggattaaatacaaataagtctctgactatgcacttccgttattacttta 30925024  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||||| |||||||    
T  30925023 gtctctgacgttaaa 30925009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 48705750 - 48705644
Alignment:
Q  103 gagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagta 202  Q
    ||||| |||| | |||||| ||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  48705750 gagtggccttggggcattgtttaagag-aacataaatagaaataatttgttgaaaaatggtgaaaagtgttgaattcaactttctaaaagttaaaaagtt 48705652  T
Q  203 ataatttc 210  Q
     |||||||    
T  48705651 gtaatttc 48705644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 48647558 - 48647444
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||| |||||| | | || |||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  48647558 tcactttagaccctgattctacagctcgctatcacataggtccctgactcaggattaaatacaaataagtctctcactctgcacttttgttatcacttta 48647459  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| ||| |||||||    
T  48647458 gtccctgacgttaaa 48647444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 48777264 - 48777366
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| |||| | |||| ||||||||||||||  ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||    
T  48777264 tcactttagtctctgattctgcagctcgctgtcacataagtccctgactcatgattaaatacaaataattccctgactctgcacttccgttatcacttta 48777363  T
Q  346 gtc 348  Q
    |||    
T  48777364 gtc 48777366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 13578414 - 13578299
Alignment:
Q  267 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnn 366  Q
    ||||||||||||| | ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||          
T  13578414 cacctcgctgtcataaagatcactgactcagaattaaatacaaataagtcactgactctgcacttccgttatcactttagtc-ctgacgttaaataatta 13578316  T
Q  367 ngttaagtgatgatgtg 383  Q
     ||||||||||||||||    
T  13578315 tgttaagtgatgatgtg 13578299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 44334564 - 44334424
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||| ||||| | |||| |||||||| |||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  44334564 tcactttagttcctgattctgcagctcgctgttacataggtccctgactcatgattaaatataaataagtccctgactctgcacttccattatcacttta 44334465  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcac 387  Q
    ||| ||| | |||||       ||||||||||||||||||||    
T  44334464 gtccctgacattaaa-aaatatgttaagtgatgatgtggcac 44334424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 7259775 - 7259660
Alignment:
Q  270 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngt 369  Q
    ||||||||||||| | || |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||       ||    
T  7259775 ctcgctgtcacatgggtctctgattcaggattaaatacaaataagtccctgactctacacttccgttatcactttagtccctgacgttaaaaaaatctgt 7259676  T
Q  370 taagtgatgatgtggc 385  Q
    ||||||||||||||||    
T  7259675 taagtgatgatgtggc 7259660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 8375698 - 8375596
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||| |||||||||||||  ||||| | ||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  8375698 tcacattagtccctgacttcgcaccgcactgtcacataggtccctgactcatgattaaatacaaagaagtttctgactctgcacttccgttatcaattta 8375599  T
Q  346 gtc 348  Q
    |||    
T  8375598 gtc 8375596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 35729201 - 35729062
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||| ||||||| | |||| ||||||||||||||| ||| ||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||| ||    
T  35729201 tcactttattccctgattttgcagctcgctgtcacataggtccttgacttaggattacatacaaataagtcactgactctgcacttccgctatcactgta 35729102  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||| ||| | |||||       ||||||||||||||||||    
T  35729101 gtccctgacattaaataaatctgttaagtgatgatgtggc 35729062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 254 - 385
Target Start/End: Original strand, 42477397 - 42477527
Alignment:
Q  254 gtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgt 353  Q
    |||| ||||| ||||||||| |||| ||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || |||     
T  42477397 gtccttgactctgcacctcgttgtcgcataggtctctgactcaggattaaatacaaataagtc-ctgactctgcacttccgttatcattttaatccctga 42477495  T
Q  354 cgttaaannnnnnngttaagtgatgatgtggc 385  Q
    |||||||       ||||||||||||||||||    
T  42477496 cgttaaaaaaatatgttaagtgatgatgtggc 42477527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 246 - 480
Target Start/End: Complemental strand, 12223814 - 12223580
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||||  ||||| ||  |||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||| ||||||    
T  12223814 tcactttagtccctgacactgcacatcaatgtcacataggtccctgactcaggattaaatataaagaagtccctgactctgcagttccgttattacttta 12223715  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    ||| |||  ||||||       |||||||||||||||| |||  |  ||| | ||||| |   |||||  |||||| || ||||||||||||||  ||||    
T  12223714 gtcactgatgttaaataattctgttaagtgatgatgtgacacaggttttacgatgacatgacatatgagttgtcacaggaactaaagtgaaagtaaaaaa 12223615  T
Q  446 tggccactttggtccctgaatcgaaaatcgatatc 480  Q
    | | ||||||| ||| |||| | |||||| |||||    
T  12223614 ttgtcactttgatccttgaaccaaaaatcaatatc 12223580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 45583692 - 45583792
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | ||||  ||||| |||||||| |||||||||||| |||||||||| ||||||  |||| |||||||||||||||||||||||    
T  45583692 tcactttagtccctgattctgcagttcgctatcacataggtccctgactcagaattaaatacagataagttcctgattctgcacttccgttatcacttta 45583791  T
Q  346 g 346  Q
    |    
T  45583792 g 45583792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 278 - 360
Target Start/End: Original strand, 44529068 - 44529150
Alignment:
Q  278 cacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||  |||||| ||||||||||||||| ||| |||||||    
T  44529068 cacatagatccctgactcatgattaaatacaaataagtctccgactcaacacttctgttatcactttagtccctgacgttaaa 44529150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 44530686 - 44530624
Alignment:
Q  286 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44530686 tccccgactcaggattaaatataaataagtctctgactctgcacttccgttatcactttagtc 44530624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 265 - 383
Target Start/End: Original strand, 12220050 - 12220167
Alignment:
Q  265 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnn 364  Q
    ||||||||| ||||||| |||| ||||||||| ||||||||| ||| ||||||||||||||||||||| | |||||||||||||| || |||||||        
T  12220050 tgcacctcgttgtcacaaagattcctgactcaagattaaatagaaagaagtctctgactctgcacttctgatatcactttagtct-tgacgttaaataat 12220148  T
Q  365 nnngttaagtgatgatgtg 383  Q
       ||||||||||||||||    
T  12220149 tttgttaagtgatgatgtg 12220167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 33474445 - 33474361
Alignment:
Q  116 gcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 201  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||  |||||| |||||||||||||||||||||||| |||||||    
T  33474445 gcattggttaagag-aacaaaaatagaaataatttgttgaaaaattatgaaaagtgttgaattcaactttctaaaagtcaaaaagt 33474361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 291 - 385
Target Start/End: Complemental strand, 45584566 - 45584472
Alignment:
Q  291 gactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| ||| |||||||       ||||||||||||||||||    
T  45584566 gactcaggattaaatacaaataagccaatgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtggc 45584472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 39708111 - 39708213
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| |||||| || ||||||| |||||| || ||| ||||||| |||| |||||||| ||||| | |||| |||||||||||||||||||||    
T  39708111 tcactttagtctctgactctgtacctcgccgtcacaaaggtccatgactcaagattgaatacaaagaagtcaccgactttgcacttccgttatcacttta 39708210  T
Q  346 gtc 348  Q
    |||    
T  39708211 gtc 39708213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 48646368 - 48646417
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48646368 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 48646417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 5930247 - 5930107
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| || ||| ||||| ||||| ||||| || ||||| ||||||||||||||||||  || | || |||| |||||||||||||||||||||    
T  5930247 tcactttagtctcttactttgcacttcgctatcacaaaggtccctaactcaggattaaatacaagaaattttc-gactgtgcacttccgttatcacttta 5930149  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcac 387  Q
    ||| ||| | |||||       ||||||||||||||||||||    
T  5930148 gtccctgccattaaataattctgttaagtgatgatgtggcac 5930107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 42477699 - 42477748
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42477699 caacttaatgttaggtccctgactgtgcatacttactatcagttaggtcc 42477748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 48788479 - 48788430
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48788479 caacttattgttaggtccctgactgtgcatacttactatcagttaggtcc 48788430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 21062825 - 21062917
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttat 338  Q
    |||||||||||||||||| ||||||||||||||| | || ||| ||||||||||||||||||| | |||||   | |||||||| ||||||||    
T  21062825 tcactttagtccctgactttgcacctcgctgtcataaaggtccttgactcaggattaaatacatagaagtcctcggctctgcacctccgttat 21062917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 24287635 - 24287707
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||| |||||||| | |||| |||||||||    
T  24287635 ttatgccgacaaggagtatgaggtgtcacagggactaaagtgaaagtagaaaatggtcgctttagtccctgaa 24287707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 360
Target Start/End: Complemental strand, 33607736 - 33607624
Alignment:
Q  248 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    ||||||||| || ||| || || ||| ||| ||| || || |||| ||||||||||||||||| |||||||||| |||||||||||||||||| |||||     
T  33607736 actttagtctctaactatgtacttcgatgttacaaaggtctctgattcaggattaaatacaaagaagtctctgattctgcacttccgttatcattttaga 33607637  T
Q  348 ctctgtcgttaaa 360  Q
    | ||| |||||||    
T  33607636 ccctgacgttaaa 33607624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 34704917 - 34705009
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttat 338  Q
    ||||||||||| | |||| ||||||||| ||||||| ||  | |||||||||||||||||||||| |||||||||||| || |||| ||||||    
T  34704917 tcactttagtctccgactctgcacctcgttgtcacaaaggcctctgactcaggattaaatacaaagaagtctctgactgtgtactttcgttat 34705009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 45583906 - 45583954
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45583906 caacttactgttaggtccctgactatgcatacttactatcagttaggtc 45583954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 473
Target Start/End: Complemental strand, 24288954 - 24288754
Alignment:
Q  273 gctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaa 372  Q
    ||||||||| ||||| || |||||||||||| ||||||  ||||  ||| | ||||||||| ||||||||||| |||||| ||||| |       |||||    
T  24288954 gctgtcacaaagatctctaactcaggattaattacaaagtagtccttgaatgtgcacttccattatcactttattctctggcgttatataattctgttaa 24288855  T
Q  373 gtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaa 472  Q
     |||||||||| ||   |  ||||||||||||||||||||| |||| ||  |||||||| | ||||| ||||||||  | |||| ||| |||| ||||||    
T  24288854 ctgatgatgtgacaaaggttttatgctgacaaggagtatgatgtgtgacatggactaaaataaaagtagaaaatggtaattttgatccttgaaccgaaaa 24288755  T
Q  473 t 473  Q
    |    
T  24288754 t 24288754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 454
Target Start/End: Complemental strand, 25621788 - 25621628
Alignment:
Q  294 tcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggct 393  Q
    |||||||||||||||||| ||| | ||| | |||||||| ||||||||||||||| ||| |||||||       ||||| ||||||| |||||      |    
T  25621788 tcaggattaaatacaaattagtttttgaatgtgcacttctgttatcactttagtcactgacgttaaataattttgttaactgatgatttggcaaagattt 25621689  T
Q  394 tatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactt 454  Q
    |||||| |||||| |||||| |||| ||  |||||||||||||||| |||||||| |||||    
T  25621688 tatgctcacaaggggtatgaagtgtaacaaggactaaagtgaaagtagaaaatggtcactt 25621628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 482 - 532
Target Start/End: Complemental strand, 45584301 - 45584251
Alignment:
Q  482 tcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  45584301 tcaacctactgttaggtccctgactgtgcatacttactatcagttaagtcc 45584251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 448
Target Start/End: Original strand, 27067811 - 27067992
Alignment:
Q  266 gcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnn 365  Q
    |||||||||||||| | ||||| ||||||| ||||||||  ||||  |||| |||| | ||||||| | |||||||||||||||||| | |||||         
T  27067811 gcacctcgctgtcataaagatctctgactc-ggattaaaagcaaagtagtccctgaatgtgcactttcattatcactttagtctctgacattaaataatt 27067909  T
Q  366 nngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatgg 448  Q
      | |||  | ||||||| ||  ||| |||||||||||| |||||||  ||||||| | ||||||||||||||| ||||||||    
T  27067910 atgctaacgggtgatgtgacaaatggtttatgctgacaaagagtatggtgtgtcacagagactaaagtgaaagtagaaaatgg 27067992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 448
Target Start/End: Complemental strand, 27210502 - 27210321
Alignment:
Q  266 gcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnn 365  Q
    |||||||||||||| | ||||| ||||||| ||||||||  ||||  |||| |||| | ||||||| | |||||||||||||||||| | |||||         
T  27210502 gcacctcgctgtcataaagatctctgactc-ggattaaaagcaaagtagtccctgaatgtgcactttcattatcactttagtctctgacattaaataatt 27210404  T
Q  366 nngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatgg 448  Q
      | |||  | ||||||| ||  ||| |||||||||||| |||||||  ||||||| | ||||||||||||||| ||||||||    
T  27210403 atgctaacgggtgatgtgacaaatggtttatgctgacaaagagtatggtgtgtcacagagactaaagtgaaagtagaaaatgg 27210321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 44333456 - 44333505
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  44333456 caacttattgttaggtccttgactgtgcatacttactatcagttaggtcc 44333505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 10894385 - 10894449
Alignment:
Q  273 gctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgtta 337  Q
    ||||| |||||| ||||||||||| ||||||||| |||||||||||| | |||||||||||||||    
T  10894385 gctgttacataggtccctgactcaagattaaatataaataagtctctaattctgcacttccgtta 10894449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 10898877 - 10898829
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  10898877 caacttactgttaggtccctgactatgcatacttagtatcagttaggtc 10898829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 19434049 - 19433912
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||| ||| | || |||| ||||||| || || |||| | ||||||||||| ||  ||||| | ||||| ||||||| ||||||||||||    
T  19434049 tcactttagtccctaactctccatctcgttgtcacaaaggtctctgatttaggattaaatataaggaagtcaccgactccgcacttcagttatcacttta 19433950  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtg 383  Q
    |||| || |||||||       ||||||||||||||||    
T  19433949 gtctatggcgttaaataattctgttaagtgatgatgtg 19433912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 473
Target Start/End: Original strand, 32793229 - 32793406
Alignment:
Q  296 aggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggctta 395  Q
    |||||||||||||||||||||  ||| |||||| ||| |||||||||||||||| || |||||||       ||||| ||||||||||||||  |  |||    
T  32793229 aggattaaatacaaataagtcattgattctgcatttcggttatcactttagtctttggcgttaaataattatgttaactgatgatgtggcacacgtttta 32793328  T
Q  396 tgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 473  Q
       ||||| |   | ||| |||||||  ||||||||||||||||  ||||||  || ||||||||||||||| |||||    
T  32793329 caatgacatgacatgtgaggtgtcacatggactaaagtgaaagtaaaaaatgatcattttggtccctgaatcaaaaat 32793406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 488 - 532
Target Start/End: Complemental strand, 33607315 - 33607271
Alignment:
Q  488 tactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  33607315 tactgttaggtccctgactttgcatacttactatcagttaggtcc 33607271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 484 - 532
Target Start/End: Original strand, 39708442 - 39708490
Alignment:
Q  484 aacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  39708442 aacttactgttaggtccctgactgtgtatacttactatcagtttggtcc 39708490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 359
Target Start/End: Complemental strand, 43461789 - 43461730
Alignment:
Q  299 attaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaa 359  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||||||||||| ||||||    
T  43461789 attaaatacaaataagttt-tgactatgcacttccgttatcactttagtctctgacgttaa 43461730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 493 - 532
Target Start/End: Complemental strand, 7259486 - 7259447
Alignment:
Q  493 ttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7259486 ttaggtccctgactgtgcatacttactatcagttaggtcc 7259447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 7258426 - 7258496
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  7258426 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 7258496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 39824287 - 39824357
Alignment:
Q  396 tgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaat 466  Q
    ||||||||||| | |||| ||||||| ||||||||||||||||| |||||||| |||||| | ||||||||    
T  39824287 tgctgacaaggtgcatgaagtgtcacagggactaaagtgaaagtagaaaatggtcactttagcccctgaat 39824357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 491 - 532
Target Start/End: Complemental strand, 30924812 - 30924771
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  30924812 tgttaggtctctgactgtgcatacttactatcagttaggtcc 30924771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 24844593 - 24844685
Alignment:
Q  258 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctc 350  Q
    |||||| ||||||||||||||||  || ||| | |||||||||||||||||||  ||||  ||| | ||||||||| |||||| |||||||||    
T  24844593 ctgactctgcacctcgctgtcaccaaggtccataactcaggattaaatacaaagtagtcattgaatgtgcacttccattatcagtttagtctc 24844685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 8879651 - 8879544
Alignment:
Q  254 gtccctgactgtgcacctcgctgtcacata-gatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctg 352  Q
    |||||||||| ||||||| ||||||| | | | | |||||||||||||||||||||||  |||  |||| | |||| ||| ||||||||||||||| |||    
T  8879651 gtccctgactctgcacctagctgtcataaaagcttcctgactcaggattaaatacaaagtagttcctgaatgtgcatttctgttatcactttagtccctg 8879552  T
Q  353 tcgttaaa 360  Q
     |||||||    
T  8879551 acgttaaa 8879544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 533
Target Start/End: Original strand, 330077 - 330115
Alignment:
Q  495 aggtccctgactgtgcatacttactatcagttaggtcct 533  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  330077 aggttcctgactgtgcatacttactatcagttaggtcct 330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 480
Target Start/End: Complemental strand, 7509565 - 7509353
Alignment:
Q  267 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnn 366  Q
    ||||||| ||||||| || ||  ||| ||| ||||||||| ||| ||||||| || |||||||||||||||| ||||||  | ||| |||||||          
T  7509565 cacctcgttgtcacaaaggtctttgattcatgattaaatataaagaagtctcagattctgcacttccgttattactttaacccctgacgttaaataattt 7509466  T
Q  367 ngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcg-aaaatggccactttggtccctgaa 465  Q
     |||||||||| |||||| || |  | || | ||||| ||| ||||| ||||||   |||||||||||||||| | ||||| | ||||||||||||| ||    
T  7509465 tgttaagtgattatgtggtacat--catacgatgacatggaatatgatgtgtcatatggactaaagtgaaagtagaaaaatagtcactttggtccctaaa 7509368  T
Q  466 tcgaaaatcgatatc 480  Q
     | |||||| |||||    
T  7509367 ccaaaaatcaatatc 7509353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 34889014 - 34888936
Alignment:
Q  270 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    |||||||||||| || || || ||||| ||||||||| ||| | |||  | ||||||||||||||||||||||||||||    
T  34889014 ctcgctgtcacaaaggtctctcactcatgattaaatataaagatgtccttaactctgcacttccgttatcactttagtc 34888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 44333288 - 44333358
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||| ||||| || |||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  44333288 tatgaggtgtcacagggaccaacgtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 44333358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 48787608 - 48787650
Alignment:
Q  488 tactgttaggtccctgactgtgcatacttactatcagttaggt 530  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  48787608 tactgttaggtcactgactgtgcatatttactatcagttaggt 48787650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 48788644 - 48788574
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| |||||||  |||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  48788644 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 48788574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 521
Target Start/End: Complemental strand, 32794597 - 32794560
Alignment:
Q  484 aacttactgttaggtccctgactgtgcatacttactat 521  Q
    |||||| |||||||||||||||||||||||||||||||    
T  32794597 aacttattgttaggtccctgactgtgcatacttactat 32794560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 491 - 532
Target Start/End: Original strand, 35728025 - 35728066
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||| || ||||||||||||||||||||||||||||||||    
T  35728025 tgttagatcactgactgtgcatacttactatcagttaggtcc 35728066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 48647246 - 48647197
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| ||||||||||||| ||| |||||||||||||||| ||||||||||    
T  48647246 caacctactgttaggtccttgattgtgcatacttactattagttaggtcc 48647197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 42477531 - 42477587
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||| ||||||| ||||| ||||||||||| |||||||  ||||||||||||||||    
T  42477531 tatgaggtgtcacagggaccaaagtgaaagtagaaaatgatcactttggtccctgaa 42477587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 527
Target Start/End: Original strand, 12221623 - 12221666
Alignment:
Q  484 aacttactgttaggtccctgactgtgcatacttactatcagtta 527  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||    
T  12221623 aacttactgttaggtccgtgattgtgcatacttattatcagtta 12221666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 458
Target Start/End: Original strand, 22621187 - 22621347
Alignment:
Q  298 gattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatg 397  Q
    ||||||||| |||  |||| |||| | |||||||| ||||||| | |||||| ||||||||||       ||||| ||||||  || ||  ||  || ||    
T  22621187 gattaaatataaagtagtccctgaatgtgcacttctgttatcagtctagtctatgtcgttaaaaacttctgttaactgatgagttgacaaatgttttttg 22621286  T
Q  398 ctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggt 458  Q
    ||||||||| | |||| |||||||  |||||||||||||||| |||||||  |||||||||    
T  22621287 ctgacaaggcgcatgatgtgtcacaaggactaaagtgaaagtagaaaatgatcactttggt 22621347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 43457619 - 43457674
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctga 464  Q
    ||||| ||||||| | |||||||||||||||  ||||||| |||||||||||||||    
T  43457619 tatgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctga 43457674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 534
Target Start/End: Complemental strand, 44334261 - 44334211
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcctt 534  Q
    |||| |||| |||||||| | |||||||||||||||||||||||||||||||    
T  44334261 caacctactattaggtcctt-actgtgcatacttactatcagttaggtcctt 44334211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 480
Target Start/End: Original strand, 384991 - 385061
Alignment:
Q  410 atgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    |||| ||||||||  ||||||||||||||| |||||| | ||||||| ||  ||||||||||||| |||||    
T  384991 atgaggtgtcacgttgactaaagtgaaagtagaaaattgtcactttgatctatgaatcgaaaatcaatatc 385061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 480
Target Start/End: Original strand, 8870132 - 8870221
Alignment:
Q  393 ttatgctgacaaggagtat--gacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    |||||||||||||||||||  || |||||||   ||||||| ||||||| |||||||   |||||||||||||||   ||||||||||||    
T  8870132 ttatgctgacaaggagtatatgaggtgtcacaaagactaaaatgaaagtagaaaatgattactttggtccctgaactaaaaatcgatatc 8870221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 10899045 - 10898975
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||| ||||| |||| |||||| |||||||| ||||||||||| |||| | |||||| ||||    
T  10899045 tatgaggtgtcacagggaccaaagagaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatat 10898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 310
Target Start/End: Original strand, 24934799 - 24934876
Alignment:
Q  235 tttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaa 310  Q
    |||||||||||  ||||||| |||||| ||| ||||  ||||||||||| || || |||||| |||||||||||||||    
T  24934799 tttgagtaaatggtcactttggtccctaactctgcatatcgctgtcacaaaggtctctgacttaggattaaatacaaa 24934876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 48647415 - 48647345
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| |||||||  |||| ||||||||||| |||||||| |||||| ||||||||| | |||||| ||||    
T  48647415 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttcgtccctgaaccaaaaatcaatat 48647345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 532
Target Start/End: Original strand, 7258601 - 7258642
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||| ||||| ||||||||||||||||||| |||||||||    
T  7258601 tgttagatccctaactgtgcatacttactatctgttaggtcc 7258642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 480
Target Start/End: Complemental strand, 8375569 - 8375504
Alignment:
Q  415 gtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||||| | ||||||||||||||| |||||||| |||||| |||||| || | |||||| |||||    
T  8375569 gtgtcacagagactaaagtgaaagtagaaaatggtcactttagtccctaaaccaaaaatcaatatc 8375504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 532
Target Start/End: Original strand, 10894671 - 10894712
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||  |||||||||||||||||||| |||||||||||    
T  10894671 tgttaggtatctgactgtgcatacttactaccagttaggtcc 10894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 12223490 - 12223442
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| | |||||||||||| |||||||||||||||||| ||||||||    
T  12223490 caacttattattaggtccctgaatgtgcatacttactatca-ttaggtcc 12223442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 528
Target Start/End: Complemental strand, 19433720 - 19433676
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttag 528  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||    
T  19433720 caacttactattaggtccctta-tgtgcatacttactatcagttag 19433676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 532
Target Start/End: Original strand, 24287795 - 24287836
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||| ||||| ||||||||||||||||||| |||||    
T  24287795 tgttaggtccttgactatgcatacttactatcagtttggtcc 24287836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Original strand, 24934965 - 24935018
Alignment:
Q  426 actaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    |||||||||||||| |||||||| ||||||| ||||| || |||||||| ||||    
T  24934965 actaaagtgaaagtagaaaatggtcactttgatccctaaaccgaaaatcaatat 24935018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 33060899 - 33060932
Alignment:
Q  327 cacttccgttatcactttagtctctgtcgttaaa 360  Q
    |||||||||||||||||||||||||| |||||||    
T  33060899 cacttccgttatcactttagtctctgacgttaaa 33060932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 5082552 - 5082481
Alignment:
Q  165 aaaaatgttgaattcaactttctaaaagttaaaaagtaataatttccgggtgcaaaattattacttttagttt 237  Q
    |||| |||||||||||||||| ||||||| |||||||  ||||||||   ||||||| || ||||||||||||    
T  5082552 aaaagtgttgaattcaactttttaaaagtcaaaaagttgtaatttcc-aatgcaaaactactacttttagttt 5082481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 531
Target Start/End: Complemental strand, 25621509 - 25621469
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    |||||||| | ||| ||||||||||||||||||||||||||    
T  25621509 tgttaggttcttgattgtgcatacttactatcagttaggtc 25621469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 30917867 - 30917947
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 473  Q
    ||||| |||||| |||||||| |||||||  |||||||||||||||  |||||| | ||| || ||||| ||| |||||||    
T  30917867 ttatgttgacaaagagtatgaggtgtcacaaggactaaagtgaaagaagaaaattgtcacgtttgtcccagaaccgaaaat 30917947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 246 - 479
Target Start/End: Complemental strand, 21733889 - 21733653
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcag---gattaaatacaaataagtctctgactctgcacttccgttatcact 342  Q
    ||||| |||||||||||| || || ||| ||||||| || |||||||||||    |||||||||||||||||||||||||||||||||||||| ||||||    
T  21733889 tcactctagtccctgactttgtacatcgttgtcacaaaggtccctgactcatcatgattaaatacaaataagtctctgactctgcacttccgtcatcact 21733790  T
Q  343 ttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcga 442  Q
    |||||   ||  ||||||       |||||||||||||||| ||| ||  ||||||||||||||||||||| ||||||||  |||||||||||||||  |    
T  21733789 ttagttgttgcagttaaaaaattctgttaagtgatgatgtgacacatgttttatgctgacaaggagtatgaagtgtcacgatgactaaagtgaaagtaaa 21733690  T
Q  443 aaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    |||||| |||||||||| ||||| |||||||| ||||    
T  21733689 aaatggtcactttggtctctgaaccgaaaatcaatat 21733653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 246 - 384
Target Start/End: Complemental strand, 31091642 - 31091504
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31091642 tcactttggtccctgactctgcaccttgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 31091543  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtgg 384  Q
    ||||||| |||||||       |||||||||||||||||    
T  31091542 gtctctgacgttaaaaaaatatgttaagtgatgatgtgg 31091504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 246 - 485
Target Start/End: Complemental strand, 34037788 - 34037549
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||| ||||| ||||||| ||||||| | || ||| | |||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  34037788 tcactttagtccttgactctgcaccttgctgtcataaaggtccataactcaggattaaatacaaataagtctatgactctgcacttctgttatcacttta 34037689  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    ||  | | |||||||       |||||||||||||||| ||| ||  ||||||||||||||||||||| |||||||   ||||||||||| ||| |||||    
T  34037688 gttcccgccgttaaaaaattatgttaagtgatgatgtgacacatgttttatgctgacaaggagtatgaggtgtcacacagactaaagtgacagtagaaaa 34037589  T
Q  446 tggccactttggtccctgaatcgaaaatcgatatcttcaa 485  Q
    | | ||||||| | |||||| | |||||| ||||| ||||    
T  34037588 tagtcactttgattcctgaaccaaaaatcaatatcctcaa 34037549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 32766354 - 32766252
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32766354 tcactttggtccctgactctgcacctcgttgtcacataggtccctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 32766255  T
Q  346 gtc 348  Q
    |||    
T  32766254 gtc 32766252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 246 - 385
Target Start/End: Original strand, 2910108 - 2910247
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||  ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||    
T  2910108 tcactttagtctttgattttgcagctcgctgtcacatagatccctgactcgggattaaatacaaataagtctctgactctgcacttcctttgtcacttta 2910207  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||| ||| |||||||       ||||||||||||||||||    
T  2910208 gtccctgacgttaaaaaaatctgttaagtgatgatgtggc 2910247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 259 - 462
Target Start/End: Complemental strand, 17466930 - 17466727
Alignment:
Q  259 tgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtta 358  Q
    ||||| |||||||||||||||||||   | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  | |||||    
T  17466930 tgactctgcacctcgctgtcacataagccgctgactcaggattaaatacaaagaagtctctgactctgcacttccgttatcactttagtctaagacgtta 17466831  T
Q  359 aannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggt 458  Q
    ||       |||||||||||||||| ||| ||  ||| | ||||||||  ||||| |||||||  | ||||||||||||||  ||||||| || |||| |    
T  17466830 aataattctgttaagtgatgatgtgacacatgttttaggatgacaaggcatatgaggtgtcacacgcactaaagtgaaagtaaaaaatggtcaatttgat 17466731  T
Q  459 ccct 462  Q
    ||||    
T  17466730 ccct 17466727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 246 - 359
Target Start/End: Complemental strand, 40000449 - 40000336
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||| | |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  40000449 tcactttggtccctgactctgcacctcgctgttacatagatccctgattgaggattaaatacaaataagtctctaaccctgcacttccgttatcacttta 40000350  T
Q  346 gtctctgtcgttaa 359  Q
     || ||| ||||||    
T  40000349 ttccctgacgttaa 40000336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 17330342 - 17330243
Alignment:
Q  249 ctttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    ||||||||| ||| | |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17330342 ctttagtccttgattctgcagctcactgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcatttccgttatcactttagtc 17330243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 24459561 - 24459459
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  24459561 tcactttggtccctgactctgcatctcgctgtcacataggtccctgaatcaggattaaatacaaataagtctctgaccctgcacttctattatcacttta 24459462  T
Q  346 gtc 348  Q
    |||    
T  24459461 gtc 24459459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 31090176 - 31090286
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 349  Q
    |||||||||||| | |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||     
T  31090176 tttagtccctgattctgcagctcgctgtcacataggtccttgactcaggattaaatataaataagtctctgactctgcacttccgttatgattttagtcc 31090275  T
Q  350 ctgtcgttaaa 360  Q
    ||| |||||||    
T  31090276 ctgacgttaaa 31090286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 246 - 384
Target Start/End: Original strand, 39015013 - 39015151
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| | |||||| ||||    
T  39015013 tcacttttgtccctgactctgcacctcgctgccacatagatccttgactcaggattaaatacaaatacgtctttgactctgcactttcattatcatttta 39015112  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtgg 384  Q
    || |||  |||||||       |||||||||||||||||    
T  39015113 gtttctaacgttaaaaatatttgttaagtgatgatgtgg 39015151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 24458068 - 24458182
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | |||| |||||| |||||||| |||||||||||  ||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  24458068 tcactttagtccctgattatgcagctcgctatcacataggtccctgactcaaaattaaatacaaataagtttctgactctacactttcgttatcacttta 24458167  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||||  |||||||    
T  24458168 gtctctaacgttaaa 24458182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 32764946 - 32765060
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | |||| || | ||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32764946 tcactttagtccctgattctgcagctagttgtcatataggtctctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 32765045  T
Q  346 gtctctgtcgttaaa 360  Q
     || ||| |||||||    
T  32765046 atccctgacgttaaa 32765060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 246 - 480
Target Start/End: Complemental strand, 34582785 - 34582551
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||| ||||||||||||| ||||||| ||||| ||| || ||  |||||| ||||||||||||||  |||| |||| | |||||||||||||||||||||    
T  34582785 tcacgttagtccctgactctgcaccttgctgttacaaaggtcattgactcgggattaaatacaaagtagtccctgaatgtgcacttccgttatcacttta 34582686  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    ||| ||| |||||||        | || |||| ||||||||   |  |||||||||||||  |||||| |||||||  | |||||||| ||||| |||||    
T  34582685 gtccctgacgttaaataattatatcaactgatcatgtggcaaaggttttatgctgacaagaggtatgaggtgtcacatgaactaaagtaaaagtagaaaa 34582586  T
Q  446 tggccactttggtccctgaatcgaaaatcgatatc 480  Q
    || ||||||| ||||||||||  |||||| |||||    
T  34582585 tgtccactttagtccctgaataaaaaatcaatatc 34582551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 14704048 - 14704128
Alignment:
Q  280 catagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 360  Q
    ||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| |||||||    
T  14704048 cataggtccctgactcaggattaaatacaaataagtccctcactctgcacttccgttatcactttagtccctgacgttaaa 14704128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 235 - 485
Target Start/End: Complemental strand, 14887626 - 14887374
Alignment:
Q  235 tttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttc 332  Q
    |||||||||||  ||||||| |||||  ||| ||||||||||||||||  || ||||||||||||||||||| | |||  |  | |||| | |||| |||    
T  14887626 tttgagtaaatggtcactttggtcccaaactctgcacctcgctgtcacgaaggtccctgactcaggattaaacataaagtataccctgaatgtgcaattc 14887527  T
Q  333 cgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaag 432  Q
    | |  |||||||| |||||  |||||||       ||||| |||||||||| ||  ||  ||||||| ||||||||||||| ||||||| ||||||||||    
T  14887526 catcgtcactttaatctctagcgttaaataattttgttaactgatgatgtgacaaatgttttatgctaacaaggagtatgaggtgtcacagggactaaag 14887427  T
Q  433 tgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaa 485  Q
    ||||||| |||||||| || | ||||||||||||  |||||| ||||| ||||    
T  14887426 tgaaagtagaaaatggtcaatatggtccctgaattaaaaatcaatatcctcaa 14887374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 39016496 - 39016384
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccct--gactcaggattaaatacaaataagtctctgactctgcacttccgttatcactt 343  Q
    ||||||||||| |||| | |||| |||||||||||||| ||| ||  ||||||||||||||||||||||||||    |||||||||||||||||||||||    
T  39016496 tcactttagtctctgattctgcagctcgctgtcacatacatctctctgactcaggattaaatacaaataagtc----actctgcacttccgttatcactt 39016401  T
Q  344 tagtctctgtcgttaaa 360  Q
    ||||||||| |||||||    
T  39016400 tagtctctgacgttaaa 39016384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 7073675 - 7073760
Alignment:
Q  274 ctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaa 359  Q
    ||||| ||||| || |||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  7073675 ctgtcgcataggtctctgattcgggattaaatacaaataagtctctgattctgcacttccgttatcactttagtccctgacgttaa 7073760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 341
Target Start/End: Complemental strand, 5915107 - 5915012
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcac 341  Q
    |||||||||||| ||||| ||||||||||| ||| |||| ||  |||||||| |||||||||||| ||||| || |||||||||||||||||||||    
T  5915107 tcactttagtccatgactctgcacctcgctttcaaataggtctttgactcagaattaaatacaaagaagtcactaactctgcacttccgttatcac 5915012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 7888572 - 7888643
Alignment:
Q  130 gaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 201  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||| |||||||    
T  7888572 gaacataaatagaaataatttcttgaaaaatggtgaaaagtgttgaatttaattttataaaagtaaaaaagt 7888643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 462
Target Start/End: Original strand, 7412122 - 7412316
Alignment:
Q  268 acctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnn 367  Q
    |||||| ||||||||||||| |||||||| ||||||||| ||| ||||| ||||   |||||||||||||||||||||||| ||  | |||||           
T  7412122 acctcgttgtcacatagatctctgactcaagattaaatataaagaagtcactgatagtgcacttccgttatcactttagtccctaacattaaataattat 7412221  T
Q  368 gttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccct 462  Q
    ||||||||||||  || ||| ||  ||| | ||||| ||  ||||| |||||||  |||||||||||||| | |||||||| ||||||| |||||    
T  7412222 gttaagtgatgacatgacacatgttttacgatgacatggcatatgatgtgtcacaaggactaaagtgaaaatagaaaatggtcactttgttccct 7412316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 38985103 - 38985002
Alignment:
Q  247 cactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttag 346  Q
    |||||||| |||| ||| |||||||| |||||||| ||||   |||||| | |||||||||||| |||||  ||||||||||||||||||||||||||||    
T  38985103 cactttagcccctaactttgcacctcactgtcacaaagatttatgactcggaattaaatacaaagaagtccttgactctgcacttccgttatcactttag 38985004  T
Q  347 tc 348  Q
    ||    
T  38985003 tc 38985002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 10824334 - 10824259
Alignment:
Q  117 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 193  Q
    ||||||||||||| |||||||||| ||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||    
T  10824334 cattggttaagag-aacataaataaaaataatttgttggaaagtggtgaaaaatgttgaatttaactttctaaaagt 10824259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 474
Target Start/End: Original strand, 38853763 - 38853991
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| | ||| ||  ||||| | || || ||||||||||||||||||||||  |||| || | | |||||||||||||||| ||||    
T  38853763 tcactttggtccctgactctacacttcattgtcataaaggtctctgactcaggattaaatacaaagtagtccctaaatgtgcacttccgttatcaattta 38853862  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    ||| ||| |||||||       ||||| | |||| ||| ||   |  ||||||| ||||||||||||| ||||||| ||||||||| ||||||| || ||    
T  38853863 gtcactgacgttaaataattatgttaactcatgacgtgacaaaagttttatgctaacaaggagtatgaggtgtcacagggactaaattgaaagtagataa 38853962  T
Q  446 tggccactttggtccctgaatcgaaaatc 474  Q
    | | | | ||||||| |||| ||||||||    
T  38853963 tagtcgccttggtccttgaaccgaaaatc 38853991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 473
Target Start/End: Original strand, 26585167 - 26585310
Alignment:
Q  327 cacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacgggga 426  Q
    |||||| ||||||||||||||||||  |||||||       ||||| |||||||||| ||  |   ||||| ||||||||||||||| ||||||| ||||    
T  26585167 cacttctgttatcactttagtctctagcgttaaataattatgttaattgatgatgtgacatatt--ttatgttgacaaggagtatgaggtgtcacaggga 26585264  T
Q  427 ctaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 473  Q
    ||||||||||| | | |||||| |||||||||||||||| |||||||    
T  26585265 ctaaagtgaaaatag-aaatggtcactttggtccctgaaccgaaaat 26585310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 232 - 447
Target Start/End: Complemental strand, 12746332 - 12746115
Alignment:
Q  232 tagtttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcac 329  Q
    ||||||||||||||  ||||||| || | ||||| |||||||||| |||  | || | |||||||||||||||||||||||  |||  |||| | ||| |    
T  12746332 tagtttgagtaaatggtcactttggttcttgactctgcacctcgcagtcttaaaggttcctgactcaggattaaatacaaagtagttcctgaatgtgccc 12746233  T
Q  330 ttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggacta 429  Q
    |||||||||||||||||||  |   ||||||         |||||||| ||||| ||   |  |||||||||||| |||||||| ||||||| |||||||    
T  12746232 ttccgttatcactttagtccataatgttaaataattctagtaagtgattatgtgacaaaagttttatgctgacaaagagtatgaggtgtcacagggacta 12746133  T
Q  430 aagtgaaagtcgaaaatg 447  Q
    |||||||||| |||||||    
T  12746132 aagtgaaagtagaaaatg 12746115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 32765257 - 32765306
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32765257 caacctactgttaggtccctgactgtgcatacttactatcagttaggtcc 32765306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 803889 - 803980
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaa 191  Q
    ||||||||| | || | |||||||||||||| |||||||||| ||||||||| ||||||| ||||||||| | |||||||||| |||||||||    
T  803889 taaagagtgccattggagcattggttaagag-aacataaataaaaataatttgttgaaaagtggtgaaaagtattgaattcaaatttctaaaa 803980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 17466093 - 17466185
Alignment:
Q  290 tgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgt 382  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||| ||||||||||| ||| ||| |||       |||||||||||||||    
T  17466093 tgactcaggattaaatacaaagatatctctgactctgcacttccgttttcactttagtccctgacgtgaaacaattatgttaagtgatgatgt 17466185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 2911587 - 2911505
Alignment:
Q  265 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    |||| ||||||||||||||   || |||||||   ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  2911587 tgcagctcgctgtcacataaggccatgactcaaagttaaatataaataagtctctgactttgcacttccgttatcactttagt 2911505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 412
Target Start/End: Complemental strand, 15442063 - 15441920
Alignment:
Q  269 cctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnng 368  Q
    ||||||||||||| |||| |||||||||||||||||||||||  ||||  ||| | |||||||   |||||||||||||||||   ||||||       |    
T  15442063 cctcgctgtcacaaagattcctgactcaggattaaatacaaagtagtccttgaatgtgcacttttattatcactttagtctctagtgttaaataattttg 15441964  T
Q  369 ttaagtgatgatgtggcacttggcttatgctgacaaggagtatg 412  Q
    |||| |||||||||||||  ||  |||||||||||| |||||||    
T  15441963 ttaactgatgatgtggcaaatgttttatgctgacaaagagtatg 15441920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 2910420 - 2910469
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  2910420 caacctactgttaggtccctgactgtgcatacttaatatcagttaggtcc 2910469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 32766084 - 32766035
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  32766084 caacttattgttaggtctctgactgtgcatacttactatcagttaggtcc 32766035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 485
Target Start/End: Original strand, 24458211 - 24458287
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaa 485  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||| |||| |||||| ||||| ||||    
T  24458211 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctcaatcaaaaatcaatatcctcaa 24458287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 24459258 - 24459210
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||    
T  24459258 caacttactgttaggtccctaactgcgcatacttactatcagttaggtc 24459210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 26586367 - 26586296
Alignment:
Q  289 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 360  Q
    |||||||| ||||||||| |||  ||||| ||| | |||||||||||||||||||||||||||| |||||||    
T  26586367 ctgactcaagattaaatataaagtagtctttgaatgtgcacttccgttatcactttagtctctggcgttaaa 26586296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 31814416 - 31814357
Alignment:
Q  289 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    ||||||||| |||||||| ||| |||| | ||||||||||||||||||||||||||||||    
T  31814416 ctgactcagaattaaatataaagaagtttttgactctgcacttccgttatcactttagtc 31814357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 491 - 532
Target Start/End: Original strand, 18675452 - 18675493
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  18675452 tgttaggttcctgactgtgcatacttactatcagttaggtcc 18675493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 347
Target Start/End: Original strand, 21732131 - 21732216
Alignment:
Q  257 cctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    ||||||| ||||||||| | ||||| || |||  |||||||||||||||||||||||||   |||||||| ||||||||||| ||||||||    
T  21732131 cctgactttgcacctcgttatcacaaaggtcc--gactcaggattaaatacaaataagt---tgactctgtacttccgttattactttagt 21732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 24458380 - 24458429
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||||||| || |||||||||||||||||||||||||||||    
T  24458380 caacctactgttaggtctcttactgtgcatacttactatcagttaggtcc 24458429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 31091331 - 31091282
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  31091331 caacttactgttagatctctgactgcgcatacttactatcagttaggtcc 31091282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 39256817 - 39256768
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  39256817 caacttactgttaggtcgctgattgtgcatacttactattagttaggtcc 39256768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 2911291 - 2911244
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  2911291 caacttactgttaggtctctgactgtgcatactta-tatcagttaggtc 2911244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 5914324 - 5914412
Alignment:
Q  258 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttag 346  Q
    |||||| ||||||||| ||| | |||| || ||||||||  |||||||||||| |||||  ||||| |||||| |||||||||||||||    
T  5914324 ctgactttgcacctcgttgtgatataggtctctgactcacaattaaatacaaagaagtcagtgactttgcactcccgttatcactttag 5914412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 18676791 - 18676719
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    |||||| ||||||||||||||  |||||  | |||||||| |||||| |||||||| ||||||||||||||||    
T  18676791 ttatgccgacaaggagtatgaaatgtcaaagagactaaagcgaaagtagaaaatggtcactttggtccctgaa 18676719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 465
Target Start/End: Original strand, 21732274 - 21732322
Alignment:
Q  417 gtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  21732274 gtcaccgggactaaagtgaaagtagaaaatggtcactttggtccctgaa 21732322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 480
Target Start/End: Complemental strand, 17330191 - 17330120
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||| ||||||| | |||||||||||||||  ||||||| |||||||||||||||| | |||||| |||||    
T  17330191 tatgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctgaacccaaaatcaatatc 17330120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 480
Target Start/End: Original strand, 32765088 - 32765159
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||| ||||||  ||||||||||||||||| |||||||| | |||||||||||||| | |||||| |||||    
T  32765088 tatgaggtgtcatagggactaaagtgaaagtagaaaatggtcgctttggtccctgaaccaaaaatcaatatc 32765159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 480
Target Start/End: Original strand, 43380738 - 43380809
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||| |||||||  | |||||||||||||| |||||||| |||||||||||||||| | |||||| |||||    
T  43380738 tatgaggtgtcacatgaactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatc 43380809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 445648 - 445602
Alignment:
Q  155 aaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 201  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||    
T  445648 aaaaatggtgaaaagtgttgaattcaacttcctaaaagtcaaaaagt 445602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 8420021 - 8420123
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| ||||  |||| |||||| |  ||||||| ||| |||||||||||||  |||| |||| | |||||||| ||||||| ||||    
T  8420021 tcactttggtccctgactctgcatttcgcggtcacaaatgtccctgagtcaagattaaatacaaagtagtccctgaatgtgcacttctgttatcagttta 8420120  T
Q  346 gtc 348  Q
    |||    
T  8420121 gtc 8420123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 33161799 - 33161877
Alignment:
Q  270 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    |||| ||||||| || || ||| || |||||||||| |||| ||||||| |||| || |||||||||||||||||||||    
T  33161799 ctcgttgtcacaaaggtctctgccttaggattaaatgcaaagaagtctcagactatgtacttccgttatcactttagtc 33161877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 480
Target Start/End: Original strand, 37607189 - 37607344
Alignment:
Q  325 tgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggg 424  Q
    |||||||||||||||||||||||| ||| ||||| |       ||||| |||||| ||| ||   |  ||||||| ||||| |||||||  ||||||  |    
T  37607189 tgcacttccgttatcactttagtccctgacgttatataattatgttaactgatgacgtgacaaaggttttatgctaacaagaagtatgagatgtcacaag 37607288  T
Q  425 gactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    |||||||||||| || |||||| | |||||||||| ||||| | |||||| |||||    
T  37607289 gactaaagtgaacgtagaaaatagtcactttggtctctgaaccaaaaatcaatatc 37607344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 31090477 - 31090526
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||| |||||| |||||||||||||||||||||||| ||||||||    
T  31090477 caacctactattaggttcctgactgtgcatacttactatcatttaggtcc 31090526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 38854944 - 38855025
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatc 474  Q
    ||||||| ||||||||||||| ||||||| ||| ||||| ||||||| || ||| | ||| ||||||| |||| ||||||||    
T  38854944 ttatgctaacaaggagtatgaggtgtcacaggggctaaattgaaagtagataatagtcaccttggtccttgaaccgaaaatc 38855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 491 - 528
Target Start/End: Complemental strand, 38855996 - 38855959
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttag 528  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  38855996 tgttaggtccctgacagtgcatacttactatcagttag 38855959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 6975837 - 6975919
Alignment:
Q  117 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 201  Q
    |||||| |||||| |||| ||||| ||||||| | ||||||  |||||||||||||||||||||||| |||| ||||| ||||||    
T  6975837 cattggctaagag-aacaaaaataaaaataatatgttgaaag-tggtgaaaaatgttgaattcaactctctagaagtttaaaagt 6975919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 480
Target Start/End: Original strand, 31442517 - 31442573
Alignment:
Q  424 ggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||||||||||||||| ||||||  ||| |||||||||||| |||||||| |||||    
T  31442517 ggactaaagtgaaagtcaaaaatgaacacattggtccctgaaccgaaaatcaatatc 31442573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 357
Target Start/End: Complemental strand, 33163574 - 33163462
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataa-gtctctgactctgcacttccgttatcacttt 344  Q
    |||||||||||  ||||| | |||| || |||| || || || ||||||||  |||||||||||| || || | ||||| |||| |||||||||||||||    
T  33163574 tcactttagtctttgactctacaccacgttgtcgcaaagttctctgactcataattaaatacaaaaaaagtatttgactatgcatttccgttatcacttt 33163475  T
Q  345 agtctctgtcgtt 357  Q
    |||||||| ||||    
T  33163474 agtctctgacgtt 33163462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 480
Target Start/End: Original strand, 14704156 - 14704227
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||| ||||||| ||||| ||||||||||| |||||| | ||||||||||| |||| | |||||| |||||    
T  14704156 tatgaggtgtcacagggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatc 14704227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 465
Target Start/End: Original strand, 31090317 - 31090364
Alignment:
Q  418 tcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    |||| ||||| ||||||||||| |||||||||| ||||||||||||||    
T  31090317 tcacagggaccaaagtgaaagtagaaaatggccgctttggtccctgaa 31090364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 534
Target Start/End: Complemental strand, 31442953 - 31442914
Alignment:
Q  495 aggtccctgactgtgcatacttactatcagttaggtcctt 534  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  31442953 aggtccctaactgtgcttacttactatcagttaggtcctt 31442914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 481
Target Start/End: Complemental strand, 31443196 - 31443125
Alignment:
Q  410 atgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 481  Q
    |||| ||||||| | ||||||||||||||| |||||| | || |||||| |||||| |||||||| ||||||    
T  31443196 atgaggtgtcacagtgactaaagtgaaagtagaaaattgtcattttggttcctgaaccgaaaatcaatatct 31443125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 532
Target Start/End: Complemental strand, 34582430 - 34582383
Alignment:
Q  485 acttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| ||| ||||||| ||||| |||||||||||||||||||||||||    
T  34582430 acttgctggtaggtccatgactatgcatacttactatcagttaggtcc 34582383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 531
Target Start/End: Complemental strand, 39016188 - 39016149
Alignment:
Q  492 gttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  39016188 gttaagtccctgactgtgcatatttactatcagttaggtc 39016149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 24459426 - 24459356
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||  ||||| ||||||||||| |||||||| ||||||| |||||||| | |||||| ||||    
T  24459426 tatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttgatccctgaaccaaaaatcaatat 24459356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 33726451 - 33726405
Alignment:
Q  152 ttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    |||||||||||||||||||  | |||| |||||||||||||||||||    
T  33726451 ttgaaaaatggtgaaaaataataaatttaactttctaaaagttaaaa 33726405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 39015156 - 39015226
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| || |||||||| |||| | |||||| ||||    
T  39015156 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcagtttggtccttgaaccaaaaatcaatat 39015226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 39016355 - 39016285
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| |||||||  |||| ||||||||||| |||||| | |||||||||||||||| | |||||| ||||    
T  39016355 tatgaggtgtcacatggaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatat 39016285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 2239652 - 2239607
Alignment:
Q  153 tgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    ||||||||||| ||||||| |||||| |||||| ||||||||||||    
T  2239652 tgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaa 2239607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 348
Target Start/End: Original strand, 11985720 - 11985801
Alignment:
Q  267 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    ||||||||||| | | || || ||||||||||||||||||||||  |||||||||   |||| || |||||||| |||||||    
T  11985720 cacctcgctgttataaaggtctctgactcaggattaaatacaaagtagtctctgaaggtgcattttcgttatcagtttagtc 11985801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 532
Target Start/End: Complemental strand, 38854298 - 38854257
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||  ||||||||||||||||||||||| |||||||    
T  38854298 tgttaggtctttgactgtgcatacttactatcagctaggtcc 38854257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 40000139 - 40000090
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||| | ||||||||||| || ||||||||||| ||||||||||    
T  40000139 caacttactgatcggtccctgactatgtatacttactatgagttaggtcc 40000090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 43380617 - 43380689
Alignment:
Q  275 tgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    ||||||| || || |||||||| ||||||||||| | |||||||||||| |||  ||  ||||||||||||||    
T  43380617 tgtcacaaaggtctctgactcatgattaaatacatagaagtctctgactgtgcgtttatgttatcactttagt 43380689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 246 - 446
Target Start/End: Original strand, 3671047 - 3671246
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||| ||| ||||| |||||||| || ||||| || || ||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  3671047 tcacttta-tccttgactttgcacctctctatcacaaaggtctctgactcagaattaaatacaaataagtctatgactctccacttccgttatcacttta 3671145  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
     || ||| |||||||       |||||||||||||||| ||| ||  |||||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  3671146 atccctgccgttaaaaaattatgttaagtgatgatgtgacacatgttttatgctgacaaggggtatgacatgtcacggggactaaagtgaaagtagaaaa 3671245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 17700526 - 17700640
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||  ||||| ||||||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17700526 tcactttagtctttgactctgcacctcgttgtcacataggttcctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 17700625  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| ||| |||||||    
T  17700626 gtccctgacgttaaa 17700640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 48572993 - 48573095
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48572993 tcactttggtccctgactctgcacctcgttatcacataggtccctgactcaggattaaatacaaataagcctctgactctgcacttccgttatcacttta 48573092  T
Q  346 gtc 348  Q
    |||    
T  48573093 gtc 48573095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 17702034 - 17701920
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| |||| | |||| |||||||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17702034 tcactttagtctctgattctgcagctcgctgtcatataggtccctgactcaagattaaatacaaataagtccctgactctgcacttccgttatcacttta 17701935  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| ||| |||||||    
T  17701934 gtccctgacgttaaa 17701920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 36278960 - 36279074
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | | || |||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36278960 tcactttagtccctgattatacagctcgttgtcacataggtccctgattcaggattaaatacaaataagtctctgactctgcacttccgttatcatttta 36279059  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| ||| |||||||    
T  36279060 gtccctgacgttaaa 36279074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 52318432 - 52318318
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| ||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||    
T  52318432 tcactttggtctctgactctgcacttcgctgtcacatagatccctgactcaggattaaatacaaataagtccctgactctgcacttctgatattacttta 52318333  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| ||| |||||||    
T  52318332 gtccctgacgttaaa 52318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 270 - 359
Target Start/End: Complemental strand, 11773142 - 11773053
Alignment:
Q  270 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaa 359  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  11773142 ctcgctgtcacataggtccctgactcaggattaaatacaaataagtctctgactctacacttccgttatcactttagtccctggcgttaa 11773053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 55388081 - 55388218
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | |||| |||||||||| |||| || |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  55388081 tcactttagtccctgattctgcagctcgctgtcatataggtctctgactcaggattaaatacaaataagttactgactctgcactcccgttatcacttta 55388180  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtg 383  Q
    ||| ||| |||||||       ||||||||||||||||    
T  55388181 gtccctgacgttaaaaaaatttgttaagtgatgatgtg 55388218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 246 - 402
Target Start/End: Original strand, 50753825 - 50753981
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||||||  || |||||||||||||||||||| ||||| | ||||||||||||| ||| |||| ||||||||| |||||| ||||||||||||    
T  50753825 tcactttagtccctagctctgcacctcgctgtcacataggtccctaattcaggattaaatataaacaagtttctgactctacacttctgttatcacttta 50753924  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgac 402  Q
    ||| ||| |||||||       |||||||||||||||||||| || ||||| |||||    
T  50753925 gtccctgccgttaaaaaaatctgttaagtgatgatgtggcacatgtcttatactgac 50753981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 2591635 - 2591737
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | |||| || |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||    
T  2591635 tcactttagtccctgattctgcagcttgctgtcacataggtccctgactcaggattaaatacaaacaagtctctgactctgcacttccatgatcacttta 2591734  T
Q  346 gtc 348  Q
    |||    
T  2591735 gtc 2591737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 45601053 - 45600952
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||||| ||  |||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  45601053 tcactttagtccctgactctgtccctcgctgtcacataggtccctgattcaggattaaatacaaagaagtc-ctgactctgcacttccgttatcacttta 45600955  T
Q  346 gtc 348  Q
    |||    
T  45600954 gtc 45600952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 47118166 - 47118052
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||||| ||||||||| ||||| |||  |||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  47118166 tcactttagtccctgactctgcacctcgttgtcatataagtccccgactcaggattaaatgcaaagaagtctctgactctgcactttcgttatcacttta 47118067  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| ||| |||||||    
T  47118066 gtccctgacgttaaa 47118052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 270 - 480
Target Start/End: Complemental strand, 36827566 - 36827356
Alignment:
Q  270 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngt 369  Q
    |||||||| ||| |||||| ||||||||||||||||| |||  | ||||||| | | ||||||||||||||||||||||||||  ||||||       ||    
T  36827566 ctcgctgtgacaaagatccttgactcaggattaaatataaaataatctctgaatgtacacttccgttatcactttagtctctgatgttaaataattttgt 36827467  T
Q  370 taagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcga 469  Q
    |||||||||||||| ||  ||  ||||||||| ||||||  ||| || |||| ||||||||||||||| | |||||||   | |||||||||||||||||    
T  36827466 taagtgatgatgtgacaaatgttttatgctgagaaggagcgtgaagtatcacagggactaaagtgaaaatagaaaatgattattttggtccctgaatcga 36827367  T
Q  470 aaatcgatatc 480  Q
    ||||| |||||    
T  36827366 aaatcaatatc 36827356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 480
Target Start/End: Original strand, 20464078 - 20464311
Alignment:
Q  247 cactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttag 346  Q
    |||||||||||| |||| ||||||||| ||||||| || |||||| |||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  20464078 cactttagtccccgactctgcacctcgttgtcacaaaggtccctggctcatgattaaatacaaagaagtccctgactctgcacttctgttatcactttag 20464177  T
Q  347 tctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaat 446  Q
    ||   | |||||||       |||||||||||||||| ||| ||  ||| | | ||| |   || || || |||| | ||||||| ||||||| ||||||    
T  20464178 tccacgacgttaaataactctgttaagtgatgatgtgacacatgttttacgataacatgacatacgaggtatcacagagactaaaatgaaagtagaaaat 20464277  T
Q  447 ggccactttggtccctgaatcgaaaatcgatatc 480  Q
    || ||||||||||| |||||| |||||| |||||    
T  20464278 ggtcactttggtccatgaatcaaaaatcaatatc 20464311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 36280401 - 36280293
Alignment:
Q  277 tcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtga 376  Q
    |||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||       |||||||||    
T  36280401 tcacataggtctctgactcaggattaaatataaataagtctctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatatgttaagtga 36280302  T
Q  377 tgatgtggc 385  Q
    |||||||||    
T  36280301 tgatgtggc 36280293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 2592122 - 2592020
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||| | | |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||   ||||||||||||||||||    
T  2592122 tcactttagtccctaattctgcagctcgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactcaatacttccgttatcacttta 2592023  T
Q  346 gtc 348  Q
    |||    
T  2592022 gtc 2592020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 19114541 - 19114655
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||||| ||||| ||| ||||||| || ||||||||||| ||||||||||||| ||||| || ||| |||||||||||||||||||||    
T  19114541 tcactttagtccctgactctgcacttcgttgtcacagaggtccctgactcaagattaaatacaaagaagtcactaactttgcacttccgttatcacttta 19114640  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||||  |||||||    
T  19114641 gtctcttacgttaaa 19114655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 211
Target Start/End: Complemental strand, 21814312 - 21814202
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    ||||||||||| |||| |||||||||||||  |||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||| ||||    
T  21814312 taaagagtgtc-tttgggcattggttaagat-aacataaatagaaataatttgttgaaaagtggtgaaaagtgttgaattcaattttctaaaagtcaaaa 21814215  T
Q  199 agtaataatttcc 211  Q
    ||| |||||||||    
T  21814214 agttataatttcc 21814202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 246 - 345
Target Start/End: Original strand, 34263813 - 34263912
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| | |||||||| ||||||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  34263813 tcactttggcccctgactctgcacctcgctgtcacagaggtccttgattcaggattaaatacaaataagtctctgactctacacttccattatcacttta 34263912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 33428550 - 33428448
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||| |||||  |||||||||| ||||||| ||||||||    
T  33428550 tcactttcgtccctgactctgcacctcgttgtcacataggtccctgactcagaattaaatacaaagaagtccttgactctgcatttccgttgtcacttta 33428451  T
Q  346 gtc 348  Q
    |||    
T  33428450 gtc 33428448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 274 - 385
Target Start/End: Complemental strand, 53959187 - 53959076
Alignment:
Q  274 ctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaag 373  Q
    ||||||||||| || |||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||       ||||||    
T  53959187 ctgtcacataggtctctgactcatgattaaatacaaataagttcatgactctgcacttccgttatcactttagtctctgacgttaaaaaaatttgttaag 53959088  T
Q  374 tgatgatgtggc 385  Q
    ||||||||||||    
T  53959087 tgatgatgtggc 53959076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 15502622 - 15502721
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    ||||||||||||||    ||||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||    
T  15502622 taaagagtgtccttgagacattggttaagag-aacaaaaatagaaataatttgttgaaaaatggtaaaaaatgttgaattcaactttttaaaagttaaaa 15502720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 47075466 - 47075352
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||| ||| ||||| ||||||||| |||||||||| ||| | ||||| ||||||||||||| ||  | |||||||| |||||||||||||||||||    
T  47075466 tcactttaatccttgactctgcacctcgttgtcacataggtccgtcactcaagattaaatacaaagaaacccctgactctacacttccgttatcacttta 47075367  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||||| |||||||    
T  47075366 gtctctgacgttaaa 47075352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 55389584 - 55389482
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||| ||| |||||||||||||||||||| ||  |||||||  ||||||||||| |||||| |||||||| |||||||||||||||||||    
T  55389584 tcactttggtccctaactctgcacctcgctgtcacataggtcattgactcaaaattaaatacaattaagtccctgactctacacttccgttatcacttta 55389485  T
Q  346 gtc 348  Q
    |||    
T  55389484 gtc 55389482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 246 - 384
Target Start/End: Original strand, 52316987 - 52317125
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| |||| | |||| |||||||||| |||| || |||||||| |||||||||||||||||||| | ||||||||| |||||||||| ||||    
T  52316987 tcactttagtctctgattctgcagctcgctgtcatataggtctctgactcatgattaaatacaaataagtctttaactctgcacctccgttatcatttta 52317086  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtgg 384  Q
    |||  || |||||||       |||||||||||||||||    
T  52317087 gtccatgacgttaaaaaaatctgttaagtgatgatgtgg 52317125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 41999005 - 41998907
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    ||||||||| |||| |  ||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  41999005 taaagagtgcccttgggacattggttaagag-aacataaatagaaataatttgttgaaaaatggtgaaaagtgttaaattcaactttataaaagtaaaaa 41998907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 195
Target Start/End: Complemental strand, 1165861 - 1165784
Alignment:
Q  117 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagtta 195  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  1165861 cattggttatgag-aacataaatagaaataatttgttgaaaagtgatgaaaaatgttgaattcaactttctaaaagtta 1165784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 48574534 - 48574472
Alignment:
Q  286 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  48574534 tccctgactcaggattaaatacaaataagtccctgactctgcactttcgttatcactttagtc 48574472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 359
Target Start/End: Complemental strand, 49261620 - 49261539
Alignment:
Q  275 tgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaa 359  Q
    |||||||||| |||||||||||||||||||||||||   |||||| |||||||| ||||||||||||||||||||||| ||||||    
T  49261620 tgtcacataggtccctgactcaggattaaatacaaa---gtctctaactctgcatttccgttatcactttagtctctgacgttaa 49261539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 369 - 466
Target Start/End: Complemental strand, 3694132 - 3694035
Alignment:
Q  369 ttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaat 466  Q
    ||||||||||||||| ||| ||  ||||||||||||||||||||| |||| |||| |||||||||||||||  ||||||| ||||||| |||||||||    
T  3694132 ttaagtgatgatgtgtcacatgttttatgctgacaaggagtatgatgtgtaacggagactaaagtgaaagtacaaaatggtcactttgatccctgaat 3694035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 48808380 - 48808476
Alignment:
Q  252 tagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    |||||||||| | |||| |||||||| | |||| || |||||||||||||||||||||||||||  || |||||||||||||||| |||||||||||    
T  48808380 tagtccctgattctgcagctcgctgttagataggtctctgactcaggattaaatacaaataagttcctaactctgcacttccgttgtcactttagtc 48808476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 15005911 - 15005830
Alignment:
Q  117 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 199  Q
    ||||||||||||| |||||||| ||||||||||| | |||||||||| |||| |||||||||||||||| |||||||||||||    
T  15005911 cattggttaagag-aacataaacagaaataatttatggaaaaatggtaaaaagtgttgaattcaactttgtaaaagttaaaaa 15005830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 19115261 - 19115160
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||| | ||||| ||||||||| |||||||||| ||| | ||||||||||||||||||| |||||  |||||||||||||||||| | ||||||    
T  19115261 tcactttagttcgtgactctgcacctcgatgtcacataggtccttcactcaggattaaatacaaagaagtc-atgactctgcacttccgtttttacttta 19115163  T
Q  346 gtc 348  Q
    |||    
T  19115162 gtc 19115160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 3084107 - 3084012
Alignment:
Q  114 gtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttcc 211  Q
    |||||||||||||||| |||||||||||| ||||||| |||||||||||| |||| |||||| || |||||||||||| |||||||||  ||||||||    
T  3084107 gtgcattggttaagag-aacataaatagatataatttgttgaaaaatggtaaaaagtgttgagtttaactttctaaaa-ttaaaaagttgtaatttcc 3084012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 34060751 - 34060850
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    |||||||||||||| ||||||||||||||| ||  | ||||| ||||| | | ||||||||||||||||| || |||||| |||||| ||||||||||||    
T  34060751 taaagagtgtccttggtgcattggttaagaagataaaaaataaaaatattgtattgaaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaa 34060850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 19331117 - 19331183
Alignment:
Q  247 cactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataa 313  Q
    |||||| || ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  19331117 cactttcgttcctgactctgcaccttgctgtcacataggtccctgactcaggattaaatacaaataa 19331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 17700838 - 17700887
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17700838 caacttactgttaggtccctgactgtacatacttactatcagttaggtcc 17700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 17701731 - 17701682
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17701731 caacctactgttaggtccctgactgtgcatacttactatcagttaggtcc 17701682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 36279264 - 36279313
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36279264 caacctactgttaggtccctgactgtgcatacttactatcagttaggtcc 36279313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 483 - 530
Target Start/End: Original strand, 48573307 - 48573354
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggt 530  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  48573307 caacttactgttaggtccctgactgtacatacttactatcagttaggt 48573354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 246 - 333
Target Start/End: Original strand, 53957683 - 53957769
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttcc 333  Q
    |||||||||| | ||| | |||| |||||||| |||||| | ||||||||||||| |||||||||||||||| |||||||||||||||    
T  53957683 tcactttagtacttgattctgcaactcgctgttacataggttcctgactcaggat-aaatacaaataagtctatgactctgcacttcc 53957769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 47427885 - 47427959
Alignment:
Q  263 tgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgtta 337  Q
    |||||||||||||||||||||| ||| |||||||  |||||||||||| ||||| |||||| ||||||| |||||    
T  47427885 tgtgcacctcgctgtcacataggtccttgactcaaaattaaatacaaagaagtccctgactgtgcacttacgtta 47427959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 55389441 - 55389371
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||||| |||||||| ||||    
T  55389441 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaatcaatat 55389371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 36280121 - 36280072
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  36280121 caacttaatgttaggtccctgactgtgcataattactatcagttaggtcc 36280072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 55389273 - 55389224
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  55389273 caacttactcttaggtccctgactgtgcatatttactatcagttaggtcc 55389224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 250 - 474
Target Start/End: Original strand, 40205893 - 40206118
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccct-gactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    ||||||||| |||| || | |||||||||| | || || || |||||| ||||||| |||||  ||||||||| | |||||||||||||||| |||||||    
T  40205893 tttagtcccggactctgtagctcgctgtcataaaggtctcttgactcacgattaaaaacaaagtagtctctgaatgtgcacttccgttatcagtttagtc 40205992  T
Q  349 tctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatgg 448  Q
      || |||||||       ||||| | |||| ||||||  ||  || ||||||||||| |  |||  ||||||  || |||||||||||||  |||||||    
T  40205993 attggcgttaaaaaattatgttaactaatgaggtggcaaatgttttgtgctgacaaggtgcgtgagttgtcacaagggctaaagtgaaagtataaaatgg 40206092  T
Q  449 ccactttggtccctgaatcgaaaatc 474  Q
     ||||||||||| |||| ||||||||    
T  40206093 tcactttggtccttgaaccgaaaatc 40206118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 349
Target Start/End: Complemental strand, 47428672 - 47428575
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||| ||||||||| |||||||| ||||||||||| ||| ||||||| ||||      ||| |||||  ||||||||||||||||||||||||| |    
T  47428672 tcactttaatccctgactttgcacctctctgtcacataggtccgtgactcaagatt------aaagaagtcattgactctgcacttccgttatcacttca 47428579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 491 - 531
Target Start/End: Complemental strand, 48574254 - 48574214
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  48574254 tgttaggtccctgactgtgcatacttactatcagttaggtc 48574214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 410 - 480
Target Start/End: Original strand, 55388211 - 55388281
Alignment:
Q  410 atgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    |||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| |||||    
T  55388211 atgatgtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatc 55388281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 48808682 - 48808731
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||| || |||||||||||||||||||||||||||||||||    
T  48808682 caacctactgttatgttcctgactgtgcatacttactatcagttaggtcc 48808731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 491 - 532
Target Start/End: Complemental strand, 48809452 - 48809411
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  48809452 tgttaggtccctaactgtgcatacttactatcagttaggtcc 48809411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 55388381 - 55388430
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||| || |||||||||||||||||||||||||||||||||    
T  55388381 caacctactgttaagttcctgactgtgcatacttactatcagttaggtcc 55388430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 2591776 - 2591848
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 481  Q
    ||||| |||||||  ||||||||||||||||  ||||| |||||||||||||||||| | |||||| ||||||    
T  2591776 tatgaggtgtcacatggactaaagtgaaagtaaaaaattgccactttggtccctgaagcaaaaatcaatatct 2591848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 17700670 - 17700726
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  17700670 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaa 17700726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 36279103 - 36279159
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  36279103 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaa 36279159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 495 - 531
Target Start/End: Complemental strand, 53958894 - 53958858
Alignment:
Q  495 aggtccctgactgtgcatacttactatcagttaggtc 531  Q
    |||||||||||||||||||||||||||||||||||||    
T  53958894 aggtccctgactgtgcatacttactatcagttaggtc 53958858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 21195283 - 21195364
Alignment:
Q  117 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 199  Q
    |||||||||| ||||||| |||||||||||  || ||| ||| || |||||| || ||||||||||||| |||||||||||||    
T  21195283 cattggttaa-aggaacaaaaatagaaatatcttgttggaaagtgatgaaaagtggtgaattcaactttttaaaagttaaaaa 21195364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 33427791 - 33427860
Alignment:
Q  277 tcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    |||||||| ||| ||| |||||||||||||||||| |  | |||||||||||||| |||||||||||||||    
T  33427791 tcacataggtccttgattcaggattaaatacaaattaacc-ctgactctgcactttcgttatcactttagt 33427860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 48808523 - 48808593
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||| | ||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  48808523 tatgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 48808593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 415 - 480
Target Start/End: Original strand, 19114670 - 19114735
Alignment:
Q  415 gtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    |||||||  |||||||||||||||| |||||||| ||||||  |||||||||| |||||| |||||    
T  19114670 gtgtcacaaggactaaagtgaaagtagaaaatggtcactttaatccctgaatcaaaaatcaatatc 19114735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 275 - 360
Target Start/End: Original strand, 39497244 - 39497329
Alignment:
Q  275 tgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 360  Q
    ||||||| || ||| |||||||||||||||||||||  |||   ||| | ||||||| |||||||| |||| ||||||||||||||    
T  39497244 tgtcacaaaggtccatgactcaggattaaatacaaaatagttattgaatgtgcactttcgttatcagtttaatctctgtcgttaaa 39497329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 531
Target Start/End: Original strand, 52317237 - 52317280
Alignment:
Q  487 ttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||    
T  52317237 ttactgttaggtccctg-ctgtgcatacttacaatcagttaggtc 52317280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 54143822 - 54143889
Alignment:
Q  129 ggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaa 196  Q
    |||||| |||||||||||  || ||||||| || ||||||||| | ||||||||||| ||||||||||    
T  54143822 ggaacaaaaatagaaatatcttattgaaaagtgatgaaaaatggtaaattcaactttttaaaagttaa 54143889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 22455369 - 22455423
Alignment:
Q  140 agaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagtt 194  Q
    ||||||||| | || |||| ||||||||||| || ||||||||||||||||||||    
T  22455369 agaaataatgtattaaaaagtggtgaaaaatattaaattcaactttctaaaagtt 22455423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 48573136 - 48573206
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||| ||| |||| | |||||| ||||    
T  48573136 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatat 48573206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 348
Target Start/End: Complemental strand, 48809697 - 48809667
Alignment:
Q  318 ctgactctgcacttccgttatcactttagtc 348  Q
    |||||||||||||||||||||||||||||||    
T  48809697 ctgactctgcacttccgttatcactttagtc 48809667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 28954302 - 28954253
Alignment:
Q  152 ttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 201  Q
    |||| |||||||| ||| |||||||||||||| |||||||||| ||||||    
T  28954302 ttgataaatggtggaaagtgttgaattcaactgtctaaaagtttaaaagt 28954253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 532
Target Start/End: Original strand, 40206381 - 40206418
Alignment:
Q  495 aggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  40206381 aggtcgctgagtgtgcatacttactatcagttaggtcc 40206418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 532
Target Start/End: Complemental strand, 52318120 - 52318079
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||  | |||||||||||||||||||||||||||||    
T  52318120 tgttaggtctttaactgtgcatacttactatcagttaggtcc 52318079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 480
Target Start/End: Original strand, 33837333 - 33837385
Alignment:
Q  428 taaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    |||| ||||||| |||||||| |||||||||||||||| | |||||| |||||    
T  33837333 taaaatgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatc 33837385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 48574431 - 48574375
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| |||||| |||| ||||    
T  48574431 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttagtccttgaa 48574375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 254 - 387
Target Start/End: Complemental strand, 7945661 - 7945528
Alignment:
Q  254 gtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgt 353  Q
    |||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||     
T  7945661 gtccctgactctgcacctcgctgtcacataggttcctgactcaggattaaatacaaataagtctctgactatgcacttccgttatcactttagtccctga 7945562  T
Q  354 cgttaaannnnnnngttaagtgatgatgtggcac 387  Q
    |||||||       | ||||||||||||||||||    
T  7945561 cgttaaaaaaatatgctaagtgatgatgtggcac 7945528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 32665885 - 32665746
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||| | |||| ||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  32665885 tcactttagtccctgattctgcagctcgctgtcacataggtctctgactcatgattaaatacaaataagtctttgactctgcacttccgttatcacttta 32665786  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    ||| ||| ||||| |       ||||||||||||||||||    
T  32665785 gtccctggcgttacaaaaatctgttaagtgatgatgtggc 32665746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 5782426 - 5782536
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 349  Q
    |||||||||||||| |||||||||||||||||||| || |||||||| ||||||||||||| |||||||||| | ||||||||| |||||||||||||||    
T  5782426 tttagtccctgactctgcacctcgctgtcacataggtctctgactcatgattaaatacaaagaagtctctgattatgcacttcccttatcactttagtct 5782525  T
Q  350 ctgtcgttaaa 360  Q
    ||| |||||||    
T  5782526 ctgacgttaaa 5782536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 385
Target Start/End: Original strand, 9339657 - 9339793
Alignment:
Q  249 ctttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    ||||||||||||| | |||| |||| ||| |||||| |||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||    
T  9339657 ctttagtccctgattctgcagctcgttgttacataggtccctgactcaggattaaatacaaataaatccccgactctgcacttccgttatcactttagtc 9339756  T
Q  349 tctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
     ||| |||||||       ||||||||||||||||||    
T  9339757 cctgacgttaaaaaaatctgttaagtgatgatgtggc 9339793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 265 - 385
Target Start/End: Complemental strand, 10333282 - 10333162
Alignment:
Q  265 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnn 364  Q
    |||| |||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||        
T  10333282 tgcagctcgctgttacataggtctctgactcaagattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctagcgttaaaaaaa 10333183  T
Q  365 nnngttaagtgatgatgtggc 385  Q
       ||||||||||||||||||    
T  10333182 tctgttaagtgatgatgtggc 10333162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 461
Target Start/End: Original strand, 8975167 - 8975382
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||| |||||| ||| ||||||| | ||||||| || ||||||||||| ||||||||| |||  ||||  ||| | ||||||| |||||||||||||    
T  8975167 tcactttggtccctaactttgcaccttgttgtcacaaaggtccctgactcaagattaaatataaagtagtccatgaatatgcactttcgttatcacttta 8975266  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    |||| || |||||||       ||||| ||||||| || ||  ||  |||||| ||||||||||||||  |||||| ||||||||||||||||| |||||    
T  8975267 gtctttggcgttaaataattttgttaattgatgatatgacaaatgttttatgccgacaaggagtatgagatgtcacagggactaaagtgaaagtagaaaa 8975366  T
Q  446 tggccactttggtccc 461  Q
    ||| ||||||||||||    
T  8975367 tggtcactttggtccc 8975382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 246 - 480
Target Start/End: Original strand, 6612427 - 6612652
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||||| ||||||||||||| | | |  || |||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  6612427 tcactttagtccctgactctgcacctcgctgttataaatgtctctgactcatgattaaatacaaacaagtctctgactctgcacttccattatcacttta 6612526  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
     || ||| |||||||       |||||||||| ||||| |         ||||||||||||| ||||| ||||||| ||||||||| | ||||| |||||    
T  6612527 atccctgacgttaaataattttgttaagtgattatgtgac---------atgctgacaaggaatatgaggtgtcacagggactaaattcaaagtagaaaa 6612617  T
Q  446 tggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||  |||||| |||| |||| | |||||| |||||    
T  6612618 tgatcacttttgtccttgaaccaaaaatcaatatc 6612652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 9341109 - 9341026
Alignment:
Q  277 tcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 360  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  9341109 tcacataggtccctgactcaggattaaatacaaataagtctctgactttgcacttctgttatcactttagtctctgacgttaaa 9341026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 52440662 - 52440571
Alignment:
Q  258 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 349  Q
    |||||| ||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  52440662 ctgactttgcacatcgctgtcacataggtccctgagtcaggattaaatataaataagtctctgactctgcacttccattatcactttagtct 52440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 10332994 - 10333096
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||||| ||||||||| |||||||||| ||| ||| ||||||||||||| ||||||||| || |||||||||||||||||||| ||||    
T  10332994 tcactttagtccctgactttgcacctcgttgtcacataggtccttgattcaggattaaatataaataagtcccttactctgcacttccgttatcatttta 10333093  T
Q  346 gtc 348  Q
    |||    
T  10333094 gtc 10333096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 22856688 - 22856802
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| |||||| |||||| || ||| ||| |||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  22856688 tcactttagtcactgactctgcaccacgttgttacaaagattcttgactcaggattaaatacaaagaagtctctaactctgcacttccgttatcacttta 22856787  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||| | |||||||    
T  22856788 gtctccgacgttaaa 22856802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 532
Target Start/End: Complemental strand, 534510 - 534378
Alignment:
Q  399 tgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaacttactgttaggt 498  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||  ||||||| |||  |||||||||||| ||||| |||| |||||| ||| |    
T  534510 tgacaaggagtatgacgtgtcacggggactaaagtgaaagtaaaaaatgatcactttgatccacgaatcgaaaatcaatatcctcaatttactg-tagat 534412  T
Q  499 ccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| | |||| ||| ||||| ||||||||||||    
T  534411 ccctaaatgtgtatatttactgtcagttaggtcc 534378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 51046645 - 51046728
Alignment:
Q  117 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 201  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  51046645 cattggttaagag-aacataaatagaaataatttgttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaaagt 51046728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 348
Target Start/End: Complemental strand, 5783205 - 5783122
Alignment:
Q  265 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  5783205 tgcacctcgctgtcacatagatcctcgactcagaattaaatacaaagaagtccatgactctgcacttccgttatcactttagtc 5783122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 7944169 - 7944265
Alignment:
Q  252 tagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    |||||||||| | |||| ||||||||||||||| |||||||||||  ||||||||||||||||||  ||||||||||||| |||||||| |||||||    
T  7944169 tagtccctgattttgcaactcgctgtcacataggtccctgactcaaaattaaatacaaataagtccttgactctgcactttcgttatcaatttagtc 7944265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 52439487 - 52439620
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||| |||||| | |||| ||||||||||||||| || ||| |||||||||||||||| ||||||||    ||||||| ||||||||||||||||    
T  52439487 tcactttagcccctgattctgcagctcgctgtcacataggtctctggctcaggattaaatacagataagtct----ctctgcatttccgttatcacttta 52439582  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtg 383  Q
    ||| ||| |||||||       ||||||||||||||||    
T  52439583 gtccctgacgttaaaaaaatctgttaagtgatgatgtg 52439620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 32268102 - 32268033
Alignment:
Q  130 gaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 199  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  32268102 gaacataaataaaaataatttgttgaaaaatggtgaaaagtgttgaattcaactttctaaaagtcaaaaa 32268033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 6614051 - 6613992
Alignment:
Q  289 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 348  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  6614051 ctgactcaggattaaatacaaataagtctctgactctgcacttcagttatcattttagtc 6613992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 473
Target Start/End: Complemental strand, 50107275 - 50107091
Alignment:
Q  289 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcact 388  Q
    |||| |||||||||||||||||  ||||||||| | ||||||||||||||||||||||||  || |||||||       ||||| ||||||  || ||      
T  50107275 ctgattcaggattaaatacaaaatagtctctgaatgtgcacttccgttatcactttagtccttggcgttaaataattatgttaactgatgacatgacaaa 50107176  T
Q  389 tggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 473  Q
     |  ||||||||||||||||||||| |||||||  ||||||| |||||||| | | |||| ||||||||||| | || |||||||    
T  50107175 ggttttatgctgacaaggagtatgaggtgtcacatggactaacgtgaaagtaggacatggtcactttggtcctttaaccgaaaat 50107091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 9340844 - 9340795
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9340844 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 9340795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 13925191 - 13925101
Alignment:
Q  119 ttggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttcc 211  Q
    ||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||| ||||||||| ||||||||| |||||||  ||||||||    
T  13925191 ttggttaagag-aacataaatagaaataatttgttgaaaaatagtgaaaagtgtt-aattcaactatctaaaagtcaaaaagttgtaatttcc 13925101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 456 - 530
Target Start/End: Complemental strand, 534382 - 534308
Alignment:
Q  456 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatacttactatcagttaggt 530  Q
    ||||||||||||||||||| ||||| |||| ||| |||||||||| |||||||| ||||||||| ||||||||||    
T  534382 ggtccctgaatcgaaaatcaatatcctcaatttattgttaggtccttgactgtgtatacttactgtcagttaggt 534308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 248 - 349
Target Start/End: Original strand, 1001164 - 1001265
Alignment:
Q  248 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    |||||||||| ||||| ||||||||| || |||| || ||| |||||| ||||||||||||||  ||||||||| | |||||||| ||||||| ||||||    
T  1001164 actttagtccatgactttgcacctcgttgccacaaaggtccatgactcgggattaaatacaaagtagtctctgaatgtgcacttctgttatcagtttagt 1001263  T
Q  348 ct 349  Q
    ||    
T  1001264 ct 1001265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 480
Target Start/End: Complemental strand, 11060899 - 11060666
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||  ||| ||||| ||||||||||||||||| || ||| |||||||  ||||||||||||  |||| |||| |  |||||| |||||||||||||    
T  11060899 tcactttgatccttgactatgcacctcgctgtcacaaaggtccatgactcaaaattaaatacaaaatagtccctgaatgggcactttcgttatcacttta 11060800  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    ||| | | |||||||       ||||| |||||| |||| |   |  |||| ||||||||| |||||| || ||||   ||||||||||||||| |||||    
T  11060799 gtccccgacgttaaataattctgttaactgatgacgtggaaaaggttttattctgacaaggggtatgaggt-tcacaatgactaaagtgaaagtagaaaa 11060701  T
Q  446 tggccactttggtccctgaatcgaaaatcgatatc 480  Q
    | | ||||||| ||||||||  ||||||| |||||    
T  11060700 ttgtcactttgatccctgaacagaaaatcaatatc 11060666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 480
Target Start/End: Original strand, 44719358 - 44719592
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||  ||| ||||| |||| |||| ||||||| ||||| || ||||||||||||||| |||  ||| | ||| | |||||||||||||||| ||||    
T  44719358 tcactttgatccttgactttgcatctcgttgtcacaaagatctctaactcaggattaaatataaagtagtttatgaatatgcacttccgttatcatttta 44719457  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 445  Q
    ||||||||| |||||       ||| | ||||| |||||||   |  ||||||| |||||| |||  | |||||||  | |||||| ||||||| |||||    
T  44719458 gtctctgtctttaaataattttgttcattgatgttgtggcaaaggttttatgctaacaaggggtacaatgtgtcacatgaactaaaatgaaagtagaaaa 44719557  T
Q  446 tggccactttggtccctgaatcgaaaatcgatatc 480  Q
    | | ||||||| ||||||||  ||||||| |||||    
T  44719558 ttgtcactttgctccctgaactgaaaatcaatatc 44719592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 346
Target Start/End: Original strand, 3117661 - 3117757
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttag 346  Q
    |||||||||| ||| | ||| ||| | ||||| || || |||||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  3117661 tttagtccctaactcttcacatcgttatcacaaaggtctctgactcaagattaaatacaaagaaatctctgactctccacttccgttatcactttag 3117757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 340
Target Start/End: Original strand, 44019996 - 44020088
Alignment:
Q  248 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatca 340  Q
    ||||| |||||||||| |||| |||| ||||||| |  || |||||||| ||||||||| ||| |||||||||||||||||||| ||||||||    
T  44019996 actttggtccctgactttgcaactcgttgtcacaaaagtctctgactcaagattaaatataaagaagtctctgactctgcacttacgttatca 44020088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 486 - 532
Target Start/End: Original strand, 32664824 - 32664870
Alignment:
Q  486 cttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  32664824 cttactgttaggtccctgattgtgcatacttactatcagttaggtcc 32664870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 447
Target Start/End: Original strand, 51450011 - 51450209
Alignment:
Q  248 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    ||||||| | |||||| |||||||||| |||||| || | ||| |||||  ||||||| |||| |||| ||||||||||||||| || ||||| ||||||    
T  51450011 actttagccgctgactctgcacctcgccgtcacaaaggttcctaactcataattaaatgcaaagaagtttctgactctgcactttcg-tatcattttagt 51450109  T
Q  348 ctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatg 447  Q
     |||| |||||||       |||||||| ||||||| ||| ||  ||| | ||||| |   ||||| ||||||| ||||||||| ||||||| |||||||    
T  51450110 atctgacgttaaataattttgttaagtggtgatgtgacacatgttttacgatgacatgtcatatgaggtgtcacagggactaaactgaaagtagaaaatg 51450209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 1107386 - 1107462
Alignment:
Q  116 gcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 193  Q
    |||||||||||||| |||||||||| ||||||||| || | ||| |||||||| ||||||||||||||| ||||||||    
T  1107386 gcattggttaagag-aacataaataaaaataatttgttaataaacggtgaaaagtgttgaattcaacttcctaaaagt 1107462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 7945378 - 7945329
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  7945378 caacttattgttaggtctctgactgtgcatacttactatcagttaggtcc 7945329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 25037926 - 25037987
Alignment:
Q  286 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    ||||||||||| ||||||||||||| ||||| ||||||||| |||| |||||||||||||||    
T  25037926 tccctgactcatgattaaatacaaagaagtcactgactctggacttacgttatcactttagt 25037987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 25043138 - 25043199
Alignment:
Q  286 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    ||||||||||| ||||||||||||| ||||| ||||||||| |||| |||||||||||||||    
T  25043138 tccctgactcatgattaaatacaaagaagtcactgactctggacttacgttatcactttagt 25043199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 534653 - 534574
Alignment:
Q  265 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||||| |||||| | | ||| ||||||||||||||||| ||||| |||||||| |||||| ||||||||||||    
T  534653 tgcacctcgctgttacataggttcttgattcaggattaaatacaaacaagtc-ctgactctacacttctgttatcacttta 534574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 39421126 - 39421026
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatgg-------tgaaaaatgttgaattcaactttctaaaa 191  Q
    |||| ||||||||| |  ||||||||||||| |||||||||||||||||||| |||||||| ||       |||||| ||||||||||||||||||||||    
T  39421126 taaacagtgtccttgggacattggttaagag-aacataaatagaaataatttgttgaaaaacggtggaaactgaaaagtgttgaattcaactttctaaaa 39421028  T
Q  192 gt 193  Q
    ||    
T  39421027 gt 39421026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 9340997 - 9340941
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  9340997 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaa 9340941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 12173173 - 12173221
Alignment:
Q  163 tgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttcc 211  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  12173173 tgaaaaatgttgaattcaactttgtaaaagtcaaaaagttataatttcc 12173221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 483 - 526
Target Start/End: Original strand, 25038197 - 25038240
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagtt 526  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  25038197 caacttattgttaggtcccttactgtgcatacttactatcagtt 25038240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 483 - 526
Target Start/End: Original strand, 25043409 - 25043452
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagtt 526  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  25043409 caacttattgttaggtcccttactgtgcatacttactatcagtt 25043452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 421
Target Start/End: Original strand, 33342511 - 33342599
Alignment:
Q  333 cgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcac 421  Q
    |||||||||||||||||||| |||||||       |||||||||||||||| ||   |  ||||||||||||||||||||| |||||||    
T  33342511 cgttatcactttagtctctgacgttaaataattatgttaagtgatgatgtgacaaaagttttatgctgacaaggagtatgaggtgtcac 33342599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 34088532 - 34088485
Alignment:
Q  298 gattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  34088532 gattaaatacaaagaagtctctgactctgcacttccactatcacttta 34088485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 483 - 534
Target Start/End: Complemental strand, 52440364 - 52440313
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcctt 534  Q
    ||||||| |||||||||||  |||| ||||||||||||||||||||||||||    
T  52440364 caacttagtgttaggtccccaactgcgcatacttactatcagttaggtcctt 52440313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 46289632 - 46289705
Alignment:
Q  163 tgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttccgggtgcaaaattattacttttagttt 237  Q
    ||||||||||||||||| ||||| |||||||||||||||  ||||||||   ||||||| || ||||||||||||    
T  46289632 tgaaaaatgttgaattcgactttttaaaagttaaaaagttgtaatttcc-aatgcaaaactactacttttagttt 46289705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 3894861 - 3894800
Alignment:
Q  131 aacataaatagaaataatttctt-gaaaaatggtgaaaaatgttgaattcaactttctaaaa 191  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||| | |||| |||||    
T  3894861 aacataaatagaaataatttgttagaaaaatagtgaaaaatgttgaatttagctttttaaaa 3894800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 32665580 - 32665531
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| ||||||||||||||||||||  || ||||||||||||||||||||    
T  32665580 caacctactgttaggtccctgactgcacacacttactatcagttaggtcc 32665531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 532
Target Start/End: Complemental strand, 34088259 - 34088213
Alignment:
Q  484 aacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  34088259 aacttactgttagatc--tgactgtgcatacttactatcagttaggtcc 34088213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 51450340 - 51450389
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||| ||||||| || | |||||||||||||||||||||||||||    
T  51450340 caacttactattaggtctcttagtgtgcatacttactatcagttaggtcc 51450389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 528
Target Start/End: Original strand, 52439781 - 52439826
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttag 528  Q
    |||| |||||||||||||||||||| ||||||||||||||| ||||    
T  52439781 caacctactgttaggtccctgactgcgcatacttactatcaattag 52439826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 9339804 - 9339868
Alignment:
Q  416 tgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    |||||| ||||| ||||||||||| |||||||| |||||||||| ||||| | |||||| |||||    
T  9339804 tgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatatc 9339868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 11059771 - 11059851
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 473  Q
    ||||| ||||||||||||||| ||||||| |||||||||||| | ||  ||||| | ||||||| ||||| || |||||||    
T  11059771 ttatggtgacaaggagtatgaggtgtcacagggactaaagtggaggtaaaaaattgtcactttgatccctcaaccgaaaat 11059851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 32665742 - 32665686
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||| |||||||  |||| ||||||||||| |||||||| ||||||||||||||||    
T  32665742 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaa 32665686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 532
Target Start/End: Original strand, 7944489 - 7944528
Alignment:
Q  493 ttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  7944489 ttaggtctctgaatgtgcatacttactatcagttaggtcc 7944528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 46289579 - 46289645
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaa 166  Q
    ||||||||||| || | ||||||||||| || || ||||||||||||||||| |||||||||| ||||    
T  46289579 taaagagtgtctttagggcattggttaaaag-aatataaatagaaataatttgttgaaaaatgttgaa 46289645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 532
Target Start/End: Complemental strand, 6613786 - 6613736
Alignment:
Q  482 tcaacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||| ||| |||||||| | |||||||||| ||||||||||||||    
T  6613786 tcaacttactattaagtccctgattatgcatacttattatcagttaggtcc 6613736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 27210795 - 27210749
Alignment:
Q  153 tgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 199  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||||    
T  27210795 tgaaaaatggtgaaaaatgatcaatttaactttttaaaagttaaaaa 27210749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 41898878 - 41898940
Alignment:
Q  136 aaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 198  Q
    ||||||||||| | | |||||||||||| |||| || |||||| |||||| ||||||||||||    
T  41898878 aaatagaaatattgtattgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaa 41898940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 481
Target Start/End: Complemental strand, 44720885 - 44720727
Alignment:
Q  325 tgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtat--gacgtgtcacg 422  Q
    ||||||||| |||||||||||||||||| |||||||        ||||  ||||| ||| ||   | ||||||||||||| | ||||  || |||||||     
T  44720885 tgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacgtgacaaaagtcttatgctgacaaagggtatatgaggtgtcaca 44720786  T
Q  423 gggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 481  Q
      ||||||||||||||| |||||| | ||||||||| | |||| |||||||| ||||||    
T  44720785 ctgactaaagtgaaagtagaaaattgtcactttggttcttgaaccgaaaatcaatatct 44720727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 6612750 - 6612799
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||||| | ||  | |||||||||||||||||||||||||||||    
T  6612750 caacttactgtttgatctttaactgtgcatacttactatcagttaggtcc 6612799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 480
Target Start/End: Original strand, 16249832 - 16249885
Alignment:
Q  427 ctaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||||||||||| |||||||| || ||| ||||||||| |||||||| |||||    
T  16249832 ctaaagtgaaagtagaaaatggtcattttagtccctgaaccgaaaatcaatatc 16249885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 29766078 - 29766150
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||||||||||  ||||||| ||||||  |  |||||||||||| | |||||| | ||||||||||||||||    
T  29766078 ttatgctgacaaatagtatgaggtgtcatagttactaaagtgaaaatagaaaattgtcactttggtccctgaa 29766150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 3e-34; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 53771164 - 53771062
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||| ||| | ||||||||||||||||||||||||||||    
T  53771164 tcactttagtccctgactctgcacctcgttgtcacataggtccctgactcagaattaaatacaaagaagcccctgactctgcacttccgttatcacttta 53771065  T
Q  346 gtc 348  Q
    |||    
T  53771064 gtc 53771062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 246 - 479
Target Start/End: Complemental strand, 26173057 - 26172822
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||||  ||| |||||||  |||||| | || ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26173057 tcactttagtccccaactatgcaccttactgtcagaaaggtccttgactcaagattaaatacaaataagtctctgactctgcacttccgttatcacttta 26172958  T
Q  346 gtctctgtcgttaaannnnnnngtt--aagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaa 443  Q
    |||  || |||||||       |||  ||||||| ||||||||| ||  |||||   ||||||||||||| |||||||   ||||||||||| ||| |||    
T  26172957 gtccatgccgttaaaaaattatgttaaaagtgataatgtggcacatgttttatgtcaacaaggagtatgaggtgtcacaatgactaaagtgacagtagaa 26172858  T
Q  444 aatggccactttggtccctgaatcgaaaatcgatat 479  Q
    |||   |||||| || |||||||| |||||| ||||    
T  26172857 aataatcactttagttcctgaatcaaaaatcaatat 26172822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 47878599 - 47878497
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||  ||||||||| ||||||||||||| |||||| |||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  47878599 tcactttgatccctgactctgcacctcgctgttacataggtccctgactctggattaaatacaaataagtccctgactctacacttccgttatcacttta 47878500  T
Q  346 gtc 348  Q
    |||    
T  47878499 gtc 47878497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 246 - 384
Target Start/End: Original strand, 42278057 - 42278195
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||| ||| | |||| || |||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  42278057 tcactttagtccttgattctgcagcttgctgtcacataggtccctgactcgggattaaatacaaataagttcctgactctgcacttccgttatcacttta 42278156  T
Q  346 gtctctgtcgttaaannnnnnngttaagtgatgatgtgg 384  Q
     || ||| |||||||       |||||||||||||||||    
T  42278157 atccctgacgttaaaaaaatctgttaagtgatgatgtgg 42278195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 235 - 348
Target Start/End: Original strand, 47874559 - 47874674
Alignment:
Q  235 tttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttc 332  Q
    |||||||||||  ||||||||||| |||| | |||| |||||| |||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||    
T  47874559 tttgagtaaatagtcactttagtctctgattctgcagctcgctatcacataggtccctgactcaagattaaatacaaataagtccctgattctgcacttc 47874658  T
Q  333 cgttatcactttagtc 348  Q
    ||||||||||||||||    
T  47874659 cgttatcactttagtc 47874674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 246 - 357
Target Start/End: Original strand, 31844730 - 31844841
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||||||  || |||||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||| ||||||| ||||||||||     
T  31844730 tcactttagtccctagctctgcacctcgctgtcacataggtccctgactcaggattaaatacaaacaagtccctaactctacacttcccttatcactttg 31844829  T
Q  346 gtctctgtcgtt 357  Q
    ||| ||||||||    
T  31844830 gtcactgtcgtt 31844841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 53770341 - 53770455
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| |||||| ||||||||||  |||||||| | |||||||||| |||||||||||| |||||| ||||||||||||||| |||||||| ||    
T  53770341 tcactttagtctctgactctgcacctcgcattcacataggttcctgactcagaattaaatacaaagaagtctatgactctgcacttccattatcactcta 53770440  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||||| |||||||    
T  53770441 gtctctgccgttaaa 53770455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 39868932 - 39869065
Alignment:
Q  248 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    ||||||||| |||||| ||||||||||||| ||| || |||||||||||  |||||||||||| |||| || ||||||||||||||||||||||||||||    
T  39868932 actttagtctctgactctgcacctcgctgttacaaaggtccctgactcataattaaatacaaacaagt-tc-gactctgcacttccgttatcactttagt 39869029  T
Q  348 ctctgtcgttaaannnnnnngttaagtgatgatgtg 383  Q
    ||||| |||||||       ||||||||||||||||    
T  39869030 ctctgacgttaaataattatgttaagtgatgatgtg 39869065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 474
Target Start/End: Complemental strand, 21623224 - 21623004
Alignment:
Q  254 gtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgt 353  Q
    |||| ||||| |||| |||| |||||||  | ||||||| |||||||||||||||||  ||||  ||| | |||||||| ||||||||||||||| | |     
T  21623224 gtccttgactctgcatctcgttgtcacaatgttccctgattcaggattaaatacaaaatagtccttgaatgtgcacttctgttatcactttagtccccga 21623125  T
Q  354 cgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccact 453  Q
    |||||||       ||||| | ||||||||||||  |  |||| |||||||||||||||| ||||||| | ||||||| ||||||| |||||||| ||||    
T  21623124 cgttaaataattatgttaactaatgatgtggcacaagttttatactgacaaggagtatgaggtgtcacagagactaaaatgaaagtagaaaatggtcact 21623025  T
Q  454 ttggtccctgaatcgaaaatc 474  Q
    ||| ||  |||| ||||||||    
T  21623024 ttgctctatgaaccgaaaatc 21623004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 246 - 352
Target Start/End: Complemental strand, 4703332 - 4703226
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||  |||||| | || ||||||||||||||| ||||| |||||| |||||||||||| |||||| ||||| | |||||||||||||||||||    
T  4703332 tcactttagttactgactctacatctcgctgtcacataggtccctaactcagaattaaatacaaagaagtctttgactgtacacttccgttatcacttta 4703233  T
Q  346 gtctctg 352  Q
    |||||||    
T  4703232 gtctctg 4703226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 48740135 - 48740021
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||||| || || ||||||||  |||||| |||||||||||||||  |||||||||||| ||||| |  |||||||||||| ||||||||||||    
T  48740135 tcactttagtccatgtctctgcacctcattgtcacgtagatccctgactcataattaaatacaaagaagtccccaactctgcacttctgttatcacttta 48740036  T
Q  346 gtctctgtcgttaaa 360  Q
    ||| ||| |||||||    
T  48740035 gtccctgacgttaaa 48740021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 250 - 431
Target Start/End: Original strand, 26170652 - 26170833
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 349  Q
    ||||||| |||||| ||||||||| ||| ||| |  |  |||||| | ||||||||||||||||||  || ||||||||||||| ||||||||||||||     
T  26170652 tttagtctctgactttgcacctcgttgttacaaaagtatctgacttaagattaaatacaaataagttccttactctgcacttccattatcactttagtcc 26170751  T
Q  350 ctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaa 431  Q
     ||  ||||||       |||||||||||||||| ||| ||  ||||||||||||||||||||| ||| || ||||| ||||    
T  26170752 atgctgttaaaaaattttgttaagtgatgatgtgacacatgttttatgctgacaaggagtatgaggtgccagggggattaaa 26170833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 54574452 - 54574532
Alignment:
Q  265 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||   | |||||||||||||||||||||||||    
T  54574452 tgcatctcgctgtcacataggtctctgactcaggattaaatacaaataagttcttaactctgcacttccgttatcacttta 54574532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 4867772 - 4867866
Alignment:
Q  116 gcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttcc 211  Q
    |||||||||||||| |||||||||| ||||||||| ||||||| ||||||||| |||||||||||| ||| ||||||| |||||||  ||||||||    
T  4867772 gcattggttaagag-aacataaataaaaataatttgttgaaaagtggtgaaaagtgttgaattcaaatttttaaaagtcaaaaagttgtaatttcc 4867866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 298 - 480
Target Start/End: Original strand, 19050298 - 19050478
Alignment:
Q  298 gattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatg 397  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | |||||||        |||||||||||||||  || ||  ||| |    
T  19050298 gattaaatacaaagaagtctcggactctgcacttccgttatcactttagtctccgacgttaaataattctattaagtgatgatgtg--acatgttttacg 19050395  T
Q  398 ctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
     ||| | ||  ||||| |||||||  ||||||||||||||||  ||||||  ||||||||||| |||| | |||||| |||||    
T  19050396 atgatatggcatatgaggtgtcacatggactaaagtgaaagtataaaatgatcactttggtccttgaagcaaaaatcaatatc 19050478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 250 - 352
Target Start/End: Complemental strand, 26685528 - 26685431
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 349  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||     ||||||||| | |||||  ||||| |||||||||||||||||||||||||    
T  26685528 tttagtccctgactctgcacctcgctgtcacataggtccctcact-----ttaaatacatagaagtccttgactatgcacttccgttatcactttagtct 26685434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 45674164 - 45674248
Alignment:
Q  116 gcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 201  Q
    ||||||||||| || || |||||||||| |||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  45674164 gcattggttaaaagaaa-ataaatagaattaatttgttgaaaaatagtgaaaagtgttgaattcaactttcttaaagttaaaaagt 45674248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 465
Target Start/End: Original strand, 21621871 - 21622050
Alignment:
Q  286 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggc 385  Q
    |||||||||||||||||||||||||  ||||  ||| | |||||||||||||||||||||||| |||  ||||||       ||||| |||||||||| |    
T  21621871 tccctgactcaggattaaatacaaaatagtcattgaatgtgcacttccgttatcactttagtccctgatgttaaataattatgttaactgatgatgtgac 21621970  T
Q  386 acttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    |      ||| |||||| |||||||||| |||||||  | ||||||||||||||  ||||||| ||||||| | ||||||    
T  21621971 aaagattttacgctgacgaggagtatgatgtgtcacaagcactaaagtgaaagtataaaatggtcactttgattcctgaa 21622050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 39870789 - 39870675
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||| || |||||| |||||||||||||||||||  | ||||| ||| ||||||| ||| | || || ||||||||||||||||| |||||||| |    
T  39870789 tcactttaatctctgactctgcacctcgctgtcacataagttcctgagtcaagattaaacacagagaaatcactgactctgcacttccgatatcacttca 39870690  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||| | |||||||    
T  39870689 gtctcaggcgttaaa 39870675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 19051346 - 19051253
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatc 339  Q
    |||||||||||||||||| | ||||||| || |||| || || |||||||  ||||||||||||| |||||||||||||| ||||| |||||||    
T  19051346 tcactttagtccctgactctacacctcgttggcacaaaggtcactgactcgagattaaatacaaagaagtctctgactctacactttcgttatc 19051253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 54574744 - 54574793
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  54574744 caacttactgttaggtccctaactgtgcatacttactatcagttaggtcc 54574793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 473
Target Start/End: Original strand, 6039171 - 6039356
Alignment:
Q  288 cctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcac 387  Q
    |||||||||  |||||||| ||||||||||||| || |||||||| | ||||| |||||||  || ||||||        ||||| |||||| ||| |||    
T  6039171 cctgactcaaaattaaatataaataagtctctggctatgcacttctggtatcattttagtccgtgccgttaataaaatttgttaaatgatgacgtgacac 6039270  T
Q  388 ttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 473  Q
     |   |||||||||||| |||||||| ||||||  ||||| |||||||  || |||||||| ||||||| |||||||| |||||||    
T  6039271 atattttatgctgacaatgagtatgaggtgtcatagggaccaaagtgagtgtagaaaatggtcactttgctccctgaaccgaaaat 6039356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 50694797 - 50694894
Alignment:
Q  286 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtg 383  Q
    |||||||||||  |||||||| |||||||| ||||| ||||||||||||||||| |||||||| ||| |||||||       ||||||||||||||||    
T  50694797 tccctgactcaaaattaaatataaataagtttctgattctgcacttccgttatctctttagtccctgacgttaaaaaattctgttaagtgatgatgtg 50694894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 54574876 - 54574822
Alignment:
Q  290 tgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttt 344  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  54574876 tgactcaggattaaatacaaataaatctctaactctgcacttctgttatcacttt 54574822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 482 - 531
Target Start/End: Complemental strand, 19051162 - 19051113
Alignment:
Q  482 tcaacttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  19051162 tcaacttattgttaggtccctgactgtgcatatttactatcagttaggtc 19051113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 459
Target Start/End: Complemental strand, 31845027 - 31844866
Alignment:
Q  289 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcact 388  Q
    |||||||||||||||||||||| || | |  |||||| |||||||||||||| ||| |||  ||  ||||||       |||||||||||||||| |||     
T  31845027 ctgactcaggattaaatacaaacaaattttagactctacacttccgttatcattttcgtccttgcagttaaaaaaatatgttaagtgatgatgtgacac- 31844929  T
Q  389 tggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtc 459  Q
            ||| |||||||||||||||||||||  ||||||||||||||||  ||||||| ||||||||||    
T  31844928 --------gctaacaaggagtatgacgtgtcacaaggactaaagtgaaagtaaaaaatggtcactttggtc 31844866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 42392016 - 42391933
Alignment:
Q  235 tttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtc 316  Q
    |||||||||||  ||||||||||| ||||||  ||||||| ||||||||||| || |||||||| |||||||||||||| ||||    
T  42392016 tttgagtaaatgatcactttagtctctgactccgcacctcactgtcacataggtctctgactcatgattaaatacaaattagtc 42391933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 267 - 465
Target Start/End: Original strand, 4701794 - 4701990
Alignment:
Q  267 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnn 366  Q
    ||||||||||||||| || ||  ||||| | ||||||||||||| ||||| | |||| |||||||||| ||||||||||||| |||  ||||||          
T  4701794 cacctcgctgtcacaaaggtctatgacttatgattaaatacaaagaagtccccgactatgcacttccgctatcactttagtccctgatgttaaataattc 4701893  T
Q  367 ngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
     ||||||||||||| |  |||  |  ||| | ||||  |  | |||| |||||||  |||||||||||||||| |||||| | ||||||||||||||||    
T  4701894 tgttaagtgatgatattacacaagttttacgatgac--gtggcatgaagtgtcacatggactaaagtgaaagtagaaaatagtcactttggtccctgaa 4701990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 485 - 531
Target Start/End: Complemental strand, 42278805 - 42278759
Alignment:
Q  485 acttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  42278805 acttactgttaggtctctggctgtgcatacttactatcagttaggtc 42278759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 45684046 - 45683989
Alignment:
Q  144 ataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 201  Q
    ||||||| ||||||| ||||||||| |||||||||||| ||| |||||||||||||||    
T  45684046 ataatttgttgaaaagtggtgaaaagtgttgaattcaaatttataaaagttaaaaagt 45683989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 531
Target Start/End: Original strand, 21622192 - 21622232
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  21622192 tgttaggtctctgactgtgcatacttactatcagttaggtc 21622232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 480
Target Start/End: Original strand, 32244429 - 32244516
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    |||||||||||| |||||||  ||||||| | |||||||||||||||  ||||||| ||||||| || ||| | |||||||| |||||    
T  32244429 ttatgctgacaaagagtatggggtgtcacagagactaaagtgaaagtaaaaaatggtcactttgatctctgcaccgaaaatcaatatc 32244516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 480
Target Start/End: Original strand, 42278200 - 42278271
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||| ||||||| ||||| ||||||||| | |||||||| |||||||||||||||| | |||||| |||||    
T  42278200 tatgaggtgtcacagggaccaaagtgaaactagaaaatggtcactttggtccctgaaccaaaaatcaatatc 42278271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 44158516 - 44158591
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactct 325  Q
    ||||| ||| |||| ||||||||| ||| ||| || | ||||||||||||||||||||||| ||||| ||||||||    
T  44158516 tttagcccccgactctgcacctcgttgttacagaggttcctgactcaggattaaatacaaagaagtccctgactct 44158591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 532
Target Start/End: Complemental strand, 24745830 - 24745788
Alignment:
Q  490 ctgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  24745830 ctgttaggtccctgactgtgtataattactatcagttaggtcc 24745788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 32244656 - 32244610
Alignment:
Q  393 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagt 439  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||    
T  32244656 ttatgctgacaaggagtatgaggtgtcacagtgactaaagtgaaagt 32244610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Complemental strand, 47878456 - 47878386
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 479  Q
    ||||| ||||||  ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  47878456 tatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 47878386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 491 - 532
Target Start/End: Complemental strand, 21622896 - 21622855
Alignment:
Q  491 tgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  21622896 tgttaggtccatgattgtgcatacttactatcagttaggtcc 21622855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 495 - 532
Target Start/End: Complemental strand, 24753325 - 24753288
Alignment:
Q  495 aggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  24753325 aggtccctgactgtgcataattactatcagttaggtcc 24753288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 42278360 - 42278409
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| |||||||||||||||||||  ||||| ||||||||||||||||||    
T  42278360 caacctactgttaggtccctgactaagcatatttactatcagttaggtcc 42278409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 47874875 - 47874924
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtcc 532  Q
    |||| ||||||||||||||||||||  ||||||||||||||||| |||||    
T  47874875 caacctactgttaggtccctgactgaacatacttactatcagttgggtcc 47874924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 20599858 - 20599802
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    ||||| ||||||| ||||||||| |||||||  ||||||| ||||||||||||||||    
T  20599858 tatgaggtgtcacagggactaaaatgaaagtaaaaaatggtcactttggtccctgaa 20599802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 480
Target Start/End: Original strand, 47874714 - 47874785
Alignment:
Q  409 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 480  Q
    ||||| ||||||| ||||| |||||||||||  ||||||| ||||||||||| |||| | |||||| |||||    
T  47874714 tatgatgtgtcacagggaccaaagtgaaagtataaaatggtcactttggtccttgaaccaaaaatcaatatc 47874785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 29722067 - 29722152
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaacttt 185  Q
    ||||||||| |||| | |||||||||| | |||||| ||||||| ||| | | |||||| ||||||||||||| |||||| ||||||    
T  29722067 taaagagtgcccttagggcattggttagg-ggaacaaaaatagatatattgtgttgaaatatggtgaaaaatgatgaatttaacttt 29722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 35911224 - 35911151
Alignment:
Q  163 tgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttccgggtgcaaaattattacttttagttt 237  Q
    |||||| |||||||||||| ||| ||||||| ||||||| ||||||| |   |||||||||| ||||||||||||    
T  35911224 tgaaaagtgttgaattcaaatttttaaaagtcaaaaagttataattttc-aatgcaaaattactacttttagttt 35911151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 465
Target Start/End: Complemental strand, 42391852 - 42391802
Alignment:
Q  415 gtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 465  Q
    |||||||  |||||||||||||||| |||||||| |||||| |||||||||    
T  42391852 gtgtcacatggactaaagtgaaagtagaaaatggtcactttagtccctgaa 42391802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 2786273 - 2786330
Alignment:
Q  290 tgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    |||||||||||||||||||||| | ||  ||| | |||||||||||||||| ||||||    
T  2786273 tgactcaggattaaatacaaattactccttgaatgtgcacttccgttatcattttagt 2786330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 359
Target Start/End: Complemental strand, 25810476 - 25810415
Alignment:
Q  298 gattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaa 359  Q
    |||||||||||||  || || ||| | |||||||||| ||||||||||||||||| ||||||    
T  25810476 gattaaatacaaagtagcctatgaatgtgcacttccgctatcactttagtctctgacgttaa 25810415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 45257608 - 45257688
Alignment:
Q  118 attggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 199  Q
    |||||||||||| |||| ||||||||||| ||| |||  || || |||||| || ||||||||||||| |||||| ||||||    
T  45257608 attggttaagag-aacaaaaatagaaatattttgttgggaagtgttgaaaagtggtgaattcaactttttaaaagctaaaaa 45257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 116063 - 116165
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||||| ||| | | |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  116063 tcactttagttcctcattctgcagctcgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactatgcacttccgttatcacttta 116162  T
Q  346 gtc 348  Q
    |||    
T  116163 gtc 116165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 69; Significance: 1e-30; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 250 - 479
Target Start/End: Original strand, 79085 - 79314
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 349  Q
    |||||| ||||||| |||||||||||||||||||| ||| ||||||| ||||||||| ||| |||||  ||||| ||||| |||| ||||||||||||||    
T  79085 tttagttcctgactctgcacctcgctgtcacataggtccttgactcatgattaaataaaaagaagtccttgactttgcacctccgatatcactttagtct 79184  T
Q  350 ctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggc 449  Q
     || |||||||       |||||||||||||||| ||| ||  ||| | ||||| |   ||||| || |||| ||||||||| ||||||  |||||||      
T  79185 ttgacgttaaataattttgttaagtgatgatgtgacacatgttttacgatgacatgacatatgaggtctcacagggactaaaatgaaagaagaaaatgat 79284  T
Q  450 cactttggtccctgaatcgaaaatcgatat 479  Q
    |||||||||||||||||  |||||| ||||    
T  79285 cactttggtccctgaataaaaaatcaatat 79314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 79798 - 79684
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    |||||||| |||||||||  |||||||| ||| |||||  | ||||||||| ||||||||||||| |||||| |||||||||| |||  |||||| ||||    
T  79798 tcactttaatccctgactcggcacctcgttgttacataagttcctgactcatgattaaatacaaagaagtctttgactctgcatttctattatcatttta 79699  T
Q  346 gtctctgtcgttaaa 360  Q
    |||| || |||||||    
T  79698 gtctttgacgttaaa 79684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 74424 - 74331
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactt 343  Q
    |||||||||||||| |||| ||| ||||||||||| ||||| ||||| ||||||||||||| |||||  ||||||| ||| || | ||||||||    
T  74424 tttagtccctgactctgcaactcactgtcacataggtccctaactcatgattaaatacaaagaagtccttgactctacacctctgatatcactt 74331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 62583 - 62663
Alignment:
Q  118 attggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 199  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  62583 attggttaagat-aacataaatagaaataattttttgaaaaatggtgaaaagtgttgaattcaactttctaaaagttaaaaa 62663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 69915 - 69995
Alignment:
Q  118 attggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 199  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  69915 attggttaagat-aacataaatagaaataattttttgaaaaatggtgaaaagtgttgaattcaactttctaaaagttaaaaa 69995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 59; Significance: 9e-25; HSPs: 3)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 5607 - 5721
Alignment:
Q  246 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 345  Q
    ||||||||||| || ||| ||||||||| ||| ||| |  || ||||||||| |||||||||||| ||||| |||||||| |||||||||||||||||||    
T  5607 tcactttagtcactcactttgcacctcgttgtgacaaatgtctctgactcagaattaaatacaaagaagtccctgactctacacttccgttatcacttta 5706  T
Q  346 gtctctgtcgttaaa 360  Q
    ||||||| |||||||    
T  5707 gtctctggcgttaaa 5721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 6036 - 5992
Alignment:
Q  483 caacttactgttaggtccctgactgtgcatacttactatcagttaggtc 531  Q
    |||||||||||||||||||||    ||||||||||||||||||||||||    
T  6036 caacttactgttaggtccctg----tgcatacttactatcagttaggtc 5992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 6361 - 6264
Alignment:
Q  250 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 347  Q
    |||||||| ||||| ||||| ||||| ||| | || ||| ||| |||| |||||||| ||| || ||  |||| ||| ||||||||||||||||||||    
T  6361 tttagtccttgactctgcacttcgctatcatagaggtccatgattcagaattaaatataaagaaatcgatgacactgtacttccgttatcactttagt 6264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 9025 - 9093
Alignment:
Q  131 aacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 199  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  9025 aacataaatagaaataatttgttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaaa 9093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 29441 - 29349
Alignment:
Q  99 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 193  Q
    |||||||||||||| |  |||| |||||||| |||||||||| ||||||||| || ||||||||||| ||||||| |||||||||||||||||||    
T  29441 taaagagtgtccttggaacattcgttaagag-aacataaataaaaataatttgttaaaaaatggtgagaaatgtt-aattcaactttctaaaagt 29349  T

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Target: scaffold0237 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 3106 - 3190
Alignment:
Q  397 gctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 481  Q
    |||||||||| | |||| |||||||  ||| ||||||| |||| |||||||| || ||||||| |||||||||||||| ||||||    
T  3106 gctgacaaggtgcatgaggtgtcacaaggattaaagtggaagtagaaaatggtcattttggtctctgaatcgaaaatcaatatct 3190  T

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Target: scaffold0237; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 1843 - 1928
Alignment:
Q  396 tgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 481  Q
    ||||||||||| | |||| ||||| |  | ||||||||| |||| |||||| | || ||||||| |||||||||||||| ||||||    
T  1843 tgctgacaaggtgcatgaggtgtcgcaagaactaaagtggaagtagaaaatagtcattttggtctctgaatcgaaaatcaatatct 1928  T

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Target: scaffold0369 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 9201 - 9137
Alignment:
Q  296 aggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 360  Q
    |||||||||||||||  ||||||||| | |||||||  ||||||| ||||||||||| |||||||    
T  9201 aggattaaatacaaaatagtctctgaatttgcacttttgttatcagtttagtctctgacgttaaa 9137  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 36650 - 36574
Alignment:
Q  235 tttgagtaaatt--cactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaa 310  Q
    ||||||||||||  ||||||||||||||||  ||||||||| ||||||| || || || |||| ||||||||||||||    
T  36650 tttgagtaaattgtcactttagtccctgaccctgcacctcg-tgtcacaaaggtctctaactcgggattaaatacaaa 36574  T

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