View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18226_high_2 (Length: 526)

Name: NF18226_high_2
Description: NF18226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18226_high_2
NF18226_high_2
[»] chr4 (82 HSPs)
chr4 (5-526)||(8312036-8312555)
chr4 (110-304)||(3666584-3666778)
chr4 (164-322)||(4689037-4689194)
chr4 (108-321)||(46471784-46471995)
chr4 (172-304)||(35232873-35233005)
chr4 (152-322)||(29233106-29233280)
chr4 (108-322)||(41325752-41325975)
chr4 (106-322)||(18399380-18399595)
chr4 (236-322)||(48338700-48338785)
chr4 (363-515)||(15724046-15724198)
chr4 (194-321)||(20986757-20986883)
chr4 (180-298)||(13715093-13715211)
chr4 (132-322)||(41312209-41312398)
chr4 (194-322)||(41260465-41260593)
chr4 (194-526)||(21069199-21069542)
chr4 (226-321)||(14867124-14867218)
chr4 (194-321)||(32222912-32223037)
chr4 (173-291)||(49641220-49641338)
chr4 (209-298)||(18319200-18319289)
chr4 (209-298)||(18396700-18396789)
chr4 (418-526)||(29232892-29233000)
chr4 (345-526)||(8484816-8484997)
chr4 (245-320)||(18536310-18536384)
chr4 (111-305)||(54273439-54273633)
chr4 (108-206)||(23449488-23449586)
chr4 (195-321)||(36106070-36106196)
chr4 (341-496)||(45226549-45226700)
chr4 (194-320)||(51907410-51907535)
chr4 (347-515)||(6102042-6102209)
chr4 (106-206)||(23625416-23625516)
chr4 (345-468)||(3666828-3666950)
chr4 (194-304)||(1564661-1564769)
chr4 (104-291)||(8485065-8485262)
chr4 (196-289)||(48602110-48602203)
chr4 (108-196)||(3999246-3999334)
chr4 (345-441)||(4688909-4689004)
chr4 (364-526)||(23120023-23120186)
chr4 (367-526)||(45983527-45983686)
chr4 (174-299)||(48685130-48685257)
chr4 (347-395)||(54273785-54273833)
chr4 (143-283)||(54997341-54997481)
chr4 (237-320)||(6102246-6102327)
chr4 (248-291)||(29701020-29701063)
chr4 (444-526)||(23625756-23625838)
chr4 (345-526)||(27743344-27743524)
chr4 (108-196)||(1564560-1564648)
chr4 (258-302)||(7763762-7763806)
chr4 (365-441)||(7784321-7784396)
chr4 (108-238)||(15724278-15724413)
chr4 (248-291)||(45464542-45464585)
chr4 (210-305)||(50686814-50686909)
chr4 (445-515)||(19753360-19753430)
chr4 (445-515)||(19786376-19786446)
chr4 (108-206)||(23119809-23119907)
chr4 (345-399)||(42199060-42199114)
chr4 (64-193)||(45226836-45226966)
chr4 (174-291)||(7783766-7783883)
chr4 (237-285)||(1920231-1920279)
chr4 (233-304)||(5122021-5122090)
chr4 (164-299)||(11031215-11031351)
chr4 (174-266)||(17845280-17845371)
chr4 (345-409)||(40494670-40494734)
chr4 (478-526)||(45464338-45464386)
chr4 (365-484)||(48653629-48653747)
chr4 (345-412)||(1920336-1920402)
chr4 (116-231)||(10777887-10778002)
chr4 (194-293)||(40494797-40494895)
chr4 (345-511)||(53934807-53934971)
chr4 (108-206)||(45464642-45464740)
chr4 (345-486)||(5122140-5122280)
chr4 (365-410)||(7764209-7764254)
chr4 (253-322)||(9058556-9058623)
chr4 (116-201)||(15986092-15986177)
chr4 (419-508)||(20986560-20986649)
chr4 (364-409)||(28148024-28148069)
chr4 (345-386)||(48602269-48602310)
chr4 (265-298)||(48653565-48653598)
chr4 (345-386)||(49641115-49641156)
chr4 (143-195)||(4642945-4642997)
chr4 (256-304)||(15724225-15724273)
chr4 (143-246)||(25686024-25686131)
chr4 (194-304)||(53935020-53935128)
[»] chr2 (48 HSPs)
chr2 (116-322)||(15320111-15320316)
chr2 (106-299)||(12041102-12041295)
chr2 (345-526)||(44085631-44085811)
chr2 (194-322)||(13194259-13194386)
chr2 (152-303)||(10242307-10242458)
chr2 (152-322)||(27301049-27301218)
chr2 (345-495)||(30514700-30514849)
chr2 (209-322)||(22014317-22014428)
chr2 (341-412)||(11377415-11377486)
chr2 (194-322)||(41166511-41166638)
chr2 (194-301)||(44085866-44085973)
chr2 (233-299)||(27898712-27898778)
chr2 (194-285)||(1331385-1331475)
chr2 (129-322)||(11050934-11051132)
chr2 (237-304)||(36500270-36500337)
chr2 (194-304)||(12841716-12841826)
chr2 (235-304)||(31719720-31719789)
chr2 (236-299)||(1536964-1537027)
chr2 (345-526)||(11678141-11678321)
chr2 (345-526)||(11695619-11695799)
chr2 (153-200)||(28790930-28790977)
chr2 (209-291)||(20496774-20496856)
chr2 (236-304)||(17763120-17763186)
chr2 (345-412)||(1331250-1331317)
chr2 (341-492)||(15320345-15320500)
chr2 (194-276)||(12884775-12884857)
chr2 (194-299)||(29172064-29172166)
chr2 (224-318)||(43452483-43452575)
chr2 (129-266)||(30759183-30759320)
chr2 (444-496)||(5862525-5862577)
chr2 (479-515)||(12884676-12884712)
chr2 (446-502)||(21480649-21480705)
chr2 (203-291)||(26316554-26316642)
chr2 (175-246)||(27962261-27962336)
chr2 (167-231)||(32646795-32646859)
chr2 (256-299)||(5862318-5862361)
chr2 (181-240)||(7162273-7162332)
chr2 (362-425)||(21734278-21734341)
chr2 (348-411)||(22014218-22014281)
chr2 (345-412)||(36964241-36964308)
chr2 (444-526)||(41461221-41461304)
chr2 (448-526)||(6946407-6946485)
chr2 (448-526)||(24725658-24725735)
chr2 (456-526)||(27301349-27301419)
chr2 (164-246)||(30761179-30761261)
chr2 (345-454)||(44741840-44741949)
chr2 (258-298)||(11678377-11678417)
chr2 (258-298)||(11695855-11695895)
[»] chr6 (41 HSPs)
chr6 (108-322)||(7169593-7169808)
chr6 (164-321)||(4577448-4577605)
chr6 (152-322)||(12108137-12108305)
chr6 (111-322)||(19134615-19134829)
chr6 (345-526)||(13532034-13532214)
chr6 (164-283)||(30752964-30753083)
chr6 (129-322)||(29048903-29049089)
chr6 (142-290)||(13531814-13531967)
chr6 (362-526)||(20500704-20500867)
chr6 (116-322)||(9686405-9686615)
chr6 (197-319)||(891945-892066)
chr6 (236-321)||(32190324-32190408)
chr6 (108-322)||(22414165-22414380)
chr6 (419-526)||(24644786-24644893)
chr6 (250-321)||(16971410-16971480)
chr6 (364-526)||(6399967-6400126)
chr6 (444-526)||(7169939-7170021)
chr6 (203-321)||(13092354-13092471)
chr6 (428-502)||(22413971-22414045)
chr6 (445-526)||(11417213-11417294)
chr6 (164-288)||(14564813-14564940)
chr6 (227-299)||(4563242-4563314)
chr6 (164-291)||(6400213-6400341)
chr6 (250-322)||(8064845-8064915)
chr6 (345-413)||(19134863-19134931)
chr6 (247-303)||(24644607-24644663)
chr6 (152-288)||(6267393-6267529)
chr6 (419-526)||(9686194-9686297)
chr6 (343-428)||(17306602-17306687)
chr6 (163-266)||(13858965-13859068)
chr6 (341-392)||(14564701-14564752)
chr6 (357-411)||(14940344-14940398)
chr6 (109-231)||(15837203-15837325)
chr6 (429-515)||(16971585-16971671)
chr6 (351-411)||(30752828-30752888)
chr6 (194-301)||(20500937-20501043)
chr6 (345-391)||(892102-892148)
chr6 (251-285)||(17306747-17306781)
chr6 (348-412)||(28633200-28633264)
chr6 (129-204)||(31944980-31945056)
chr6 (341-377)||(32190438-32190474)
[»] chr7 (82 HSPs)
chr7 (108-304)||(48643160-48643355)
chr7 (351-526)||(48642931-48643105)
chr7 (111-321)||(47646277-47646486)
chr7 (194-321)||(27456685-27456811)
chr7 (108-321)||(29211131-29211340)
chr7 (108-291)||(26208798-26208984)
chr7 (180-321)||(43202772-43202912)
chr7 (194-321)||(6879696-6879822)
chr7 (347-526)||(30855239-30855417)
chr7 (345-515)||(37375482-37375651)
chr7 (108-303)||(30855470-30855672)
chr7 (116-322)||(1812836-1813046)
chr7 (115-526)||(11833982-11834403)
chr7 (236-440)||(2734567-2734767)
chr7 (363-526)||(8118057-8118220)
chr7 (345-522)||(22298679-22298855)
chr7 (187-321)||(23033038-23033170)
chr7 (194-322)||(524467-524594)
chr7 (162-322)||(23410785-23410944)
chr7 (242-321)||(7697649-7697727)
chr7 (233-304)||(16535386-16535457)
chr7 (233-304)||(16630205-16630276)
chr7 (152-304)||(20334966-20335123)
chr7 (111-322)||(27100114-27100328)
chr7 (111-322)||(27177975-27178189)
chr7 (194-322)||(35495763-35495891)
chr7 (194-322)||(40849213-40849342)
chr7 (198-305)||(38879489-38879596)
chr7 (345-502)||(16535507-16535663)
chr7 (345-502)||(16629999-16630155)
chr7 (174-321)||(25007618-25007763)
chr7 (194-322)||(46147567-46147693)
chr7 (341-412)||(23675634-23675705)
chr7 (118-287)||(31011278-31011457)
chr7 (364-526)||(10338586-10338746)
chr7 (236-318)||(11399482-11399563)
chr7 (456-526)||(30079453-30079523)
chr7 (351-469)||(32237867-32237984)
chr7 (345-526)||(6879856-6880035)
chr7 (197-322)||(36550821-36550945)
chr7 (194-289)||(8117881-8117976)
chr7 (194-312)||(8568148-8568267)
chr7 (444-515)||(20334738-20334809)
chr7 (194-285)||(29628606-29628697)
chr7 (256-321)||(33435339-33435403)
chr7 (339-412)||(49012306-49012379)
chr7 (250-322)||(22298888-22298958)
chr7 (106-321)||(26956200-26956413)
chr7 (210-305)||(1032556-1032651)
chr7 (348-411)||(22701099-22701161)
chr7 (364-411)||(23729629-23729676)
chr7 (345-412)||(46147467-46147534)
chr7 (445-515)||(35819930-35820000)
chr7 (252-317)||(21237428-21237492)
chr7 (70-206)||(10337996-10338135)
chr7 (458-502)||(23729543-23729587)
chr7 (344-412)||(26524694-26524762)
chr7 (351-391)||(30079341-30079381)
chr7 (447-507)||(34751155-34751215)
chr7 (142-237)||(7685704-7685799)
chr7 (345-412)||(17493148-17493214)
chr7 (345-412)||(17560000-17560066)
chr7 (208-275)||(23675771-23675838)
chr7 (348-498)||(23706888-23707038)
chr7 (251-322)||(27214848-27214917)
chr7 (447-526)||(31287625-31287704)
chr7 (194-278)||(38903223-38903309)
chr7 (220-291)||(49012611-49012682)
chr7 (477-515)||(7697443-7697481)
chr7 (419-497)||(16359334-16359411)
chr7 (197-291)||(22700943-22701036)
chr7 (164-266)||(47484185-47484286)
chr7 (359-412)||(21237546-21237599)
chr7 (343-408)||(27214948-27215013)
chr7 (129-206)||(31287301-31287378)
chr7 (203-260)||(32296754-32296811)
chr7 (347-410)||(8568316-8568380)
chr7 (339-391)||(11399400-11399452)
chr7 (237-285)||(17493043-17493091)
chr7 (237-285)||(17560123-17560171)
chr7 (194-258)||(30079190-30079254)
chr7 (342-454)||(33434327-33434438)
[»] chr1 (80 HSPs)
chr1 (180-322)||(9330755-9330896)
chr1 (106-322)||(26344559-26344774)
chr1 (108-300)||(35375545-35375743)
chr1 (164-322)||(35979844-35980000)
chr1 (131-299)||(21685088-21685256)
chr1 (104-291)||(34721261-34721448)
chr1 (109-303)||(50471473-50471665)
chr1 (163-291)||(25507263-25507391)
chr1 (154-322)||(40094730-40094892)
chr1 (153-322)||(6248430-6248603)
chr1 (209-304)||(18834175-18834270)
chr1 (116-304)||(44056107-44056305)
chr1 (345-526)||(32910129-32910303)
chr1 (194-322)||(6693702-6693827)
chr1 (108-291)||(3937147-3937329)
chr1 (108-322)||(25559525-25559745)
chr1 (108-277)||(9961752-9961921)
chr1 (209-321)||(9249705-9249815)
chr1 (111-322)||(10847039-10847253)
chr1 (194-322)||(18310323-18310450)
chr1 (195-322)||(36203048-36203175)
chr1 (164-322)||(23474680-23474829)
chr1 (106-322)||(27507013-27507238)
chr1 (194-321)||(35992197-35992322)
chr1 (346-526)||(26344808-26344987)
chr1 (108-287)||(26063715-26063904)
chr1 (194-322)||(8269002-8269129)
chr1 (128-299)||(24630329-24630501)
chr1 (152-299)||(16537385-16537526)
chr1 (173-304)||(25865576-25865707)
chr1 (194-322)||(52380331-52380460)
chr1 (208-290)||(17989432-17989514)
chr1 (194-291)||(8165143-8165240)
chr1 (345-526)||(8165302-8165481)
chr1 (195-291)||(11072971-11073067)
chr1 (163-271)||(31451342-31451450)
chr1 (419-526)||(34914275-34914381)
chr1 (357-526)||(41751291-41751456)
chr1 (108-289)||(50951521-50951700)
chr1 (345-526)||(6248224-6248397)
chr1 (347-496)||(39167028-39167176)
chr1 (108-285)||(382448-382634)
chr1 (198-278)||(32937053-32937133)
chr1 (419-526)||(12973712-12973819)
chr1 (197-304)||(32909972-32910079)
chr1 (108-206)||(16063288-16063386)
chr1 (105-299)||(39157809-39158014)
chr1 (444-526)||(40095268-40095350)
chr1 (341-526)||(52380489-52380672)
chr1 (164-266)||(52829210-52829312)
chr1 (226-299)||(13056166-13056239)
chr1 (116-322)||(15881716-15881920)
chr1 (341-440)||(10847282-10847380)
chr1 (345-412)||(17652002-17652069)
chr1 (351-477)||(11073135-11073260)
chr1 (344-441)||(382282-382378)
chr1 (363-496)||(11536969-11537101)
chr1 (345-502)||(25507046-25507201)
chr1 (438-515)||(27350794-27350871)
chr1 (250-317)||(36782025-36782093)
chr1 (444-515)||(3935614-3935685)
chr1 (444-499)||(15881994-15882049)
chr1 (345-412)||(35992356-35992423)
chr1 (194-322)||(41751576-41751704)
chr1 (224-305)||(45949159-45949239)
chr1 (198-266)||(11537256-11537323)
chr1 (226-322)||(12973924-12974019)
chr1 (419-526)||(16062999-16063104)
chr1 (419-526)||(36782204-36782310)
chr1 (212-322)||(39358250-39358358)
chr1 (351-426)||(52829051-52829126)
chr1 (484-526)||(6694265-6694307)
chr1 (448-526)||(17989200-17989278)
chr1 (345-411)||(35375424-35375490)
chr1 (364-494)||(39158085-39158214)
chr1 (345-526)||(44055876-44056057)
chr1 (173-231)||(50311139-50311197)
chr1 (341-390)||(8268924-8268973)
chr1 (366-411)||(18310199-18310244)
chr1 (345-412)||(19051377-19051445)
[»] chr8 (46 HSPs)
chr8 (341-526)||(40436582-40436765)
chr8 (108-302)||(12659773-12659976)
chr8 (164-304)||(27674893-27675033)
chr8 (194-322)||(1271490-1271617)
chr8 (164-301)||(12193029-12193168)
chr8 (164-301)||(12437457-12437596)
chr8 (143-322)||(13325657-13325837)
chr8 (108-266)||(4785641-4785799)
chr8 (172-301)||(40436814-40436943)
chr8 (242-322)||(28441826-28441905)
chr8 (220-526)||(9012460-9012774)
chr8 (194-287)||(3155623-3155716)
chr8 (345-511)||(13325459-13325624)
chr8 (220-322)||(28801927-28802031)
chr8 (238-304)||(12073863-12073929)
chr8 (108-197)||(26774839-26774928)
chr8 (203-296)||(30942942-30943035)
chr8 (371-526)||(12193248-12193401)
chr8 (371-526)||(12437676-12437829)
chr8 (109-244)||(28072643-28072778)
chr8 (143-304)||(41346284-41346446)
chr8 (240-322)||(15452311-15452392)
chr8 (445-526)||(33566097-33566178)
chr8 (226-305)||(44024549-44024628)
chr8 (239-321)||(44337105-44337187)
chr8 (236-304)||(12070921-12070989)
chr8 (213-301)||(22810806-22810894)
chr8 (345-409)||(28441729-28441793)
chr8 (245-320)||(11219314-11219389)
chr8 (477-515)||(11017166-11017204)
chr8 (108-206)||(11219447-11219545)
chr8 (213-322)||(24681705-24681814)
chr8 (445-515)||(36340604-36340674)
chr8 (339-412)||(12073970-12074043)
chr8 (345-526)||(11219095-11219279)
chr8 (249-321)||(18754978-18755049)
chr8 (252-304)||(31477849-31477901)
chr8 (345-383)||(28801856-28801894)
chr8 (480-526)||(37162541-37162587)
chr8 (347-392)||(29914356-29914401)
chr8 (110-231)||(45366807-45366928)
chr8 (372-412)||(1271398-1271438)
chr8 (194-274)||(3129267-3129347)
chr8 (458-526)||(18755197-18755265)
chr8 (67-206)||(31477674-31477814)
chr8 (347-387)||(32063900-32063940)
[»] chr5 (66 HSPs)
chr5 (108-321)||(23418326-23418538)
chr5 (194-321)||(22553715-22553841)
chr5 (108-289)||(4414609-4414799)
chr5 (194-304)||(38147485-38147595)
chr5 (345-526)||(11402742-11402921)
chr5 (107-321)||(42920546-42920763)
chr5 (345-524)||(14652604-14652782)
chr5 (143-291)||(35727358-35727504)
chr5 (180-304)||(11402971-11403095)
chr5 (106-321)||(2802493-2802709)
chr5 (142-312)||(8541865-8542044)
chr5 (164-321)||(41805397-41805549)
chr5 (198-301)||(6633680-6633783)
chr5 (181-412)||(34111368-34111595)
chr5 (345-526)||(36567859-36568039)
chr5 (345-526)||(34881079-34881259)
chr5 (96-322)||(28224355-28224587)
chr5 (197-300)||(18432467-18432570)
chr5 (108-291)||(33793023-33793206)
chr5 (443-526)||(41455017-41455100)
chr5 (106-321)||(2796332-2796548)
chr5 (180-321)||(39052914-39053054)
chr5 (142-266)||(40692857-40692980)
chr5 (208-304)||(41455247-41455343)
chr5 (194-304)||(2423183-2423292)
chr5 (129-298)||(19402614-19402792)
chr5 (155-312)||(2589362-2589522)
chr5 (345-526)||(25495234-25495414)
chr5 (194-298)||(34880919-34881023)
chr5 (194-291)||(39730641-39730737)
chr5 (345-496)||(40331241-40331390)
chr5 (345-411)||(40692714-40692780)
chr5 (106-319)||(25495450-25495673)
chr5 (419-496)||(31075440-31075516)
chr5 (247-320)||(36568073-36568145)
chr5 (345-441)||(7487075-7487170)
chr5 (116-291)||(5175152-5175326)
chr5 (350-496)||(12264051-12264196)
chr5 (245-322)||(10090586-10090662)
chr5 (129-266)||(26690209-26690345)
chr5 (129-266)||(26959941-26960077)
chr5 (164-224)||(34087817-34087877)
chr5 (364-526)||(6595130-6595292)
chr5 (345-412)||(18432346-18432413)
chr5 (341-412)||(38176235-38176306)
chr5 (341-412)||(38203459-38203530)
chr5 (445-515)||(17131934-17132004)
chr5 (481-526)||(33792816-33792861)
chr5 (111-231)||(15216549-15216668)
chr5 (194-270)||(23623410-23623486)
chr5 (152-215)||(1681662-1681725)
chr5 (342-409)||(2423077-2423144)
chr5 (247-290)||(14652845-14652888)
chr5 (348-390)||(1681395-1681437)
chr5 (345-391)||(27571817-27571863)
chr5 (445-515)||(32244230-32244300)
chr5 (456-526)||(34969477-34969547)
chr5 (348-469)||(10090431-10090550)
chr5 (343-412)||(18845774-18845843)
chr5 (210-322)||(32721020-32721132)
chr5 (116-197)||(33901511-33901592)
chr5 (341-469)||(40109374-40109502)
chr5 (252-304)||(691254-691306)
chr5 (252-304)||(6595319-6595371)
chr5 (266-322)||(12378752-12378808)
chr5 (348-412)||(12378844-12378908)
[»] chr3 (68 HSPs)
chr3 (108-304)||(44651336-44651532)
chr3 (345-526)||(44651107-44651286)
chr3 (348-525)||(37045458-37045632)
chr3 (194-321)||(51660600-51660726)
chr3 (67-300)||(17144204-17144437)
chr3 (108-289)||(8557280-8557460)
chr3 (198-322)||(2831988-2832111)
chr3 (360-526)||(8557723-8557888)
chr3 (152-317)||(26758591-26758760)
chr3 (152-322)||(45629549-45629713)
chr3 (108-322)||(8355685-8355908)
chr3 (210-312)||(37045676-37045779)
chr3 (194-304)||(42362818-42362926)
chr3 (345-524)||(50578757-50578935)
chr3 (128-304)||(21562925-21563104)
chr3 (345-526)||(25919011-25919191)
chr3 (194-410)||(22472663-22472888)
chr3 (349-526)||(42362980-42363156)
chr3 (349-524)||(4280430-4280607)
chr3 (174-321)||(20846832-20846976)
chr3 (108-318)||(22255801-22256019)
chr3 (164-322)||(48169029-48169191)
chr3 (152-322)||(4280644-4280828)
chr3 (109-299)||(50578501-50578702)
chr3 (353-490)||(4763709-4763845)
chr3 (108-299)||(52632509-52632706)
chr3 (194-319)||(55467241-55467365)
chr3 (345-516)||(5640486-5640654)
chr3 (345-526)||(26758372-26758552)
chr3 (341-507)||(55467395-55467561)
chr3 (116-322)||(45914727-45914929)
chr3 (339-524)||(2566085-2566269)
chr3 (357-515)||(21562710-21562866)
chr3 (345-526)||(27054222-27054402)
chr3 (109-266)||(4669984-4670141)
chr3 (364-526)||(38651765-38651928)
chr3 (108-291)||(46252948-46253147)
chr3 (252-304)||(38651686-38651738)
chr3 (438-526)||(45629337-45629425)
chr3 (455-526)||(25465949-25466020)
chr3 (247-298)||(25918905-25918956)
chr3 (180-303)||(54122697-54122819)
chr3 (348-410)||(34635607-34635668)
chr3 (194-291)||(10481218-10481315)
chr3 (189-262)||(25399435-25399508)
chr3 (344-412)||(20846731-20846799)
chr3 (235-318)||(36330313-36330397)
chr3 (203-291)||(38681602-38681690)
chr3 (111-242)||(25858632-25858762)
chr3 (345-412)||(36330434-36330501)
chr3 (345-410)||(4668990-4669055)
chr3 (347-392)||(21238314-21238359)
chr3 (345-441)||(44662162-44662260)
chr3 (108-197)||(51661875-51661964)
chr3 (195-299)||(5640325-5640429)
chr3 (459-523)||(5671872-5671936)
chr3 (459-523)||(5681369-5681433)
chr3 (428-496)||(30739469-30739537)
chr3 (371-510)||(45914992-45915129)
chr3 (108-192)||(55467140-55467224)
chr3 (129-200)||(2565825-2565896)
chr3 (110-201)||(34185402-34185493)
chr3 (364-411)||(51660895-51660942)
chr3 (345-412)||(52632282-52632349)
chr3 (253-303)||(32073070-32073120)
chr3 (341-390)||(17144488-17144537)
chr3 (482-526)||(22257391-22257435)
chr3 (456-512)||(52632195-52632251)
[»] scaffold0664 (1 HSPs)
scaffold0664 (210-321)||(6339-6449)
[»] scaffold0001 (2 HSPs)
scaffold0001 (209-320)||(428004-428114)
scaffold0001 (237-304)||(405807-405875)
[»] scaffold0204 (2 HSPs)
scaffold0204 (236-322)||(26222-26307)
scaffold0204 (194-304)||(14898-15008)
[»] scaffold0688 (6 HSPs)
scaffold0688 (194-321)||(1531-1662)
scaffold0688 (262-321)||(8100-8158)
scaffold0688 (194-321)||(3125-3255)
scaffold0688 (262-321)||(4792-4849)
scaffold0688 (345-410)||(1437-1501)
scaffold0688 (345-410)||(8006-8070)
[»] scaffold0015 (1 HSPs)
scaffold0015 (445-515)||(62568-62638)


Alignment Details
Target: chr4 (Bit Score: 379; Significance: 0; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 5 - 526
Target Start/End: Complemental strand, 8312555 - 8312036
Alignment:
Q  5 caaaggtagttttacttacatcaccaaatatactttgagtgtttaatactgagccaatcctaaatagaaaaactgtaaactgaactaacctaa-ctaaag 103  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||| | ||||||| || ||||||    
T  8312555 caaaggtagttttacttacatcaccgaatata-tttgaatgtttaaaactgagccaatcctaaatagaaaaactgtaaacggcactaacccaaactaaag 8312457  T
Q  104 ctgtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaacta 203  Q
    ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  8312456 ctgcaaaaaactgcatttgattcagatgtatttggataattttcttattcaaccgtatgatttggttcagattgcagtttttattttaccaaccaaatta 8312357  T
Q  204 aactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct 303  Q
    || || |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  8312356 aattgtaacataagataaacattaattaaacatatgtcacatagaccaatattcatagaaactcaatgaaaatttttataaaatgacaaattttttctct 8312257  T
Q  304 ttgttaagtatcttctttgnnnnnnnctcattaaattctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgatta 403  Q
    ||||||||| |||||||||       |||||||||||||| || |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  8312256 ttgttaagtctcttctttgtttttttctcattaaattctacttaaacttttagagaaagataaaatcttagtc--ttgcatttcttaccgaatatgatta 8312159  T
Q  404 ctttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaat 503  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8312158 ccttttgtctttatctttaatttgggtctatgttgttgtaaacattgctggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaaa 8312059  T
Q  504 tatgttgtgtttcagctttttaa 526  Q
    | |||||||||| ||||||||||    
T  8312058 tttgttgtgttttagctttttaa 8312036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 110 - 304
Target Start/End: Original strand, 3666584 - 3666778
Alignment:
Q  110 aaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgc 209  Q
    ||||| ||||||| |||| | | ||||| || | ||||||| ||||| | ||| |||||||  ||||||  ||||| |||||||||||||||  ||| ||    
T  3666584 aaaaccgcatttgattcagaagcatttgaatcactttcttactcaactgcatggtttggtttggtttgcgatttttgttttaccaaccaaaccgaaccgc 3666683  T
Q  210 aacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    ||||||||| ||||| |||||| |||||||| || ||||| |||| |||||||||||||||||||||||||||||||||| | ||||||||||||    
T  3666684 aacataagaaaaacaataattaaacatatgtaacttagactaatattcatagaaactcaatgaaaacttttataaaatgatatattttttctctt 3666778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 164 - 322
Target Start/End: Complemental strand, 4689194 - 4689037
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaa 263  Q
    |||||||  |||||| |||||||| ||||||||| ||  |||||||||||||||| ||||| |||||| || |||||||| ||||| |||||||||| ||    
T  4689194 tttggtttggtttgcggtttttatattaccaaccgaaacaaactgcaacataagaaaaacaataattaaacttatgtcacctagacaaatactcataaaa 4689095  T
Q  264 actcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    ||||||||||||||| |||||||||| | |||||||||| ||||||| | |||||||||    
T  4689094 actcaatgaaaacttctataaaatgatatattttttctc-ttgttaattttcttctttg 4689037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 108 - 321
Target Start/End: Complemental strand, 46471995 - 46471784
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    |||||||  ||||||||||  ||||||| |||| | ||| ||| ||||||| |||||||||||  |||||| ||||| ||||||  |||||||| ||||     
T  46471995 aaaaaaccccatttggttcggatgtattcggatcacttttttactcaaccgcatgatttggtttggtttgcggttttcattttatgaaccaaaccaaacc 46471896  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgt 307  Q
     |||||||||| |||| ||||||| |  |||||||| |||||||||||| ||| |||||||||| ||| ||||||||||||||| |||||||||| ||||    
T  46471895 acaacataagaaaaactttaattaaat-tatgtcacctagaccaatacttataaaaactcaatggaaatttttataaaatgacatattttttctc-ttgt 46471798  T
Q  308 taagtatcttcttt 321  Q
    ||||| | ||||||    
T  46471797 taagttttttcttt 46471784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 172 - 304
Target Start/End: Original strand, 35232873 - 35233005
Alignment:
Q  172 agtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatg 271  Q
    ||||||| |||||||||||| ||||| |||||||| ||||||||||| ||||| |||||| || |||||||| ||||| ||||| |||||||||||||||    
T  35232873 agtttgcggtttttattttatcaaccgaactaaaccgcaacataagaaaaacactaattaaacttatgtcacctagacaaatacacatagaaactcaatg 35232972  T
Q  272 aaaacttttataaaatgacaaattttttctctt 304  Q
    ||||||| ||||||||||||  |||||| ||||    
T  35232973 aaaacttctataaaatgacattttttttttctt 35233005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 152 - 322
Target Start/End: Complemental strand, 29233280 - 29233106
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaacc-----aaactaaactgcaacataagataaacattaattagacatatgtcacata 246  Q
    ||||||| ||| |||||||| |||||  ||||| ||||||||||||     |||| ||||  ||| |||||| ||||| |||||| | |||| | ||||     
T  29233280 tcaaccgcatggtttggttcggtttgtggttttaattttaccaaccgaaccaaacaaaaccccaatataagaaaaacactaattaaatatatattacatg 29233181  T
Q  247 gaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    || |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||    
T  29233180 gatcaatactcatagaaactcaatgaaaactttaataaaatgacatattttttc-ctttgttaagtttcttctttg 29233106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 322
Target Start/End: Complemental strand, 41325975 - 41325752
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc---------- 197  Q
    |||||| |||||||| |||  |||||||||||| | ||  ||| ||||| | ||| |||||||| |||||||||||| ||||||||||||              
T  41325975 aaaaaattgcatttgattcggatgtatttggatcaattatttactcaactgcatggtttggttcggtttgcagttttgattttaccaaccgaaccaaacc 41325876  T
Q  198 aaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttt 297  Q
    |||| |||| |||| |||||| ||||| |||||||| |||| |||| | |||||||||||  | |||||||||| ||||||| ||||||||||| |||||    
T  41325875 aaaccaaaccgcaatataagaaaaacactaattagatatatatcactttgaccaatactcgaataaactcaatggaaactttaataaaatgacatatttt 41325776  T
Q  298 ttctctttgttaagtatcttctttg 322  Q
    |||| |||||||||| |||||||||    
T  41325775 ttct-tttgttaagtttcttctttg 41325752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 106 - 322
Target Start/End: Complemental strand, 18399595 - 18399380
Alignment:
Q  106 gtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaa 205  Q
    ||||||||||||| |||||||   ||||||||||| | ||| ||| ||| |   ||| |||| ||  ||||||  ||||||||||||||||||||| |||    
T  18399595 gtaaaaaactgcaattggttcggttgtatttggatcacttttttactcagcaacatggtttgctttggtttgcgttttttattttaccaaccaaaccaaa 18399496  T
Q  206 ctgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
    |  || ||||||| ||||| |||||| |||||| |||  |||| ||||||  |||||||||||||| |||||||||| |||||||| |||||||  | ||    
T  18399495 caacatcataagaaaaacactaattaaacatatatcatctagaacaatacaaatagaaactcaatggaaacttttatgaaatgacatattttttgac-tt 18399397  T
Q  306 gttaagtatcttctttg 322  Q
    ||||||| |||||||||    
T  18399396 gttaagtttcttctttg 18399380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 236 - 322
Target Start/End: Complemental strand, 48338785 - 48338700
Alignment:
Q  236 tatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||| |||||||||    
T  48338785 tatgtcacctagaccaatactcatagaaactcaatggaaacttttataaaatgacatattttttct-attgttaagtttcttctttg 48338700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 363 - 515
Target Start/End: Complemental strand, 15724198 - 15724046
Alignment:
Q  363 ataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaat 462  Q
    ||||||||||||||||||||||||||||   |||| |||||| |||||||  | | ||||| |||| |||||||||||| |||||||||    |||||||    
T  15724198 ataaaatcttagtcttttgcatttcttaaaaaataggattacattttgtccatgtttttaacttgg-tctatgttgttggaaacattgtaaaatgaaaat 15724100  T
Q  463 gaaattgaaatatgggatgaaatttaaaacattgctg-aaattatgttgtgttt 515  Q
     |||||| |||||  |||||||||||||||||||||| ||| ||||||||||||    
T  15724099 aaaattgtaatatttgatgaaatttaaaacattgctgaaaaatatgttgtgttt 15724046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 194 - 321
Target Start/End: Complemental strand, 20986883 - 20986757
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| |||| |||||| ||||| |||||| | |||| |||| | |||||||||||||| |||||||||  ||||||| ||||||||||| |    
T  20986883 aaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcacttggaccaatactcatataaactcaatagaaactttaataaaatgacata 20986784  T
Q  294 ttttttctctttgttaagtatcttcttt 321  Q
    ||||||||| ||||||||| ||||||||    
T  20986783 ttttttctc-ttgttaagtttcttcttt 20986757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 13715211 - 13715093
Alignment:
Q  180 gtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttt 279  Q
    |||||||||||||||||||||| |||| |||||||||   ||||| |||||| | |||||||||||| |||||||||||||  || | |||| |||||||    
T  13715211 gtttttattttaccaaccaaaccaaaccgcaacataaataaaacactaattaaatatatgtcacatataccaatactcatattaaataaatggaaacttt 13715112  T
Q  280 tataaaatgacaaattttt 298  Q
    |||||||| ||| ||||||    
T  13715111 tataaaataacatattttt 13715093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 322
Target Start/End: Original strand, 41312209 - 41312398
Alignment:
Q  132 tatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaatta 231  Q
    ||||||||| | ||| ||| ||||||||||| || | ||  |||| | ||||| ||||||  || ||||| |||| ||||||||||| |||| |||||||    
T  41312209 tatttggatcacttttttactcaaccgtatggttcgatttggtttacggttttcattttagaaatcaaaccaaaccgcaacataagaaaaactttaatta 41312308  T
Q  232 gacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
     |  ||| |||| ||||||| ||||||||||||||||||  ||||||||||| ||||||| |||||||||  ||||||| | |||||||||    
T  41312309 aatctatatcacctagaccagtactcatagaaactcaatagaaacttttatagaatgacatattttttct-attgttaaatttcttctttg 41312398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 41260593 - 41260465
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaa-aacttttataaaatgacaa 292  Q
    |||||||| |||||||||||||||| ||||| |||||| || |||||||  || |||||||||||||||||||| |||||    |||||||||||||||     
T  41260593 aaccaaaccaaactgcaacataagaaaaacactaattaaacttatgtcatctaaaccaatactcatagaaactccatgaattttttttataaaatgacat 41260494  T
Q  293 attttttctctttgttaagtatcttctttg 322  Q
    |||||||||| |||| |||| |||||||||    
T  41260493 attttttctc-ttgtaaagtttcttctttg 41260465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 526
Target Start/End: Complemental strand, 21069542 - 21069199
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| || | |||||| ||||| |||||| | ||||||||| || |||||||||| || ||||| |||||||||||| ||||||||||| |    
T  21069542 aaccaaaccaaaccgcgatataagaaaaacactaattaaatatatgtcacttacaccaatactcgtataaacttaatgaaaactttaataaaatgacata 21069443  T
Q  294 ttttttctct-ttgttaagtatcttctttg-nnnnnnnctca---------ttaaattctatttgaacttttagagaaagat-aaaatcttagtcttttg 381  Q
    | |||| ||| ||||||||| |||||||||         |||         |||  | ||| ||||||| |||||||| ||| ||||  |||||||||||    
T  21069442 tgttttttctcttgttaagtttcttctttgctttttgtttcaaaaatgtatttatgtactacttgaactcttagagaatgataaaaaatttagtcttttg 21069343  T
Q  382 catttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatg 481  Q
    ||||||||||  |||||||||||||||||||   || |||||||| |||||| || ||||   ||| |||||| ||||||| |||||| ||| | ||||     
T  21069342 catttcttacataatatgattactttttgtccacat-tttaattt-ggtctacgtagttggggacactgttggatgaaaataaaattgtaatgttggatt 21069245  T
Q  482 aaattt-aaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||| ||||||||| ||||| ||||| |||||| ||||||||||    
T  21069244 aaatttaaaaacattgttgaaaatatgtagtgttttagctttttaa 21069199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 321
Target Start/End: Complemental strand, 14867218 - 14867124
Alignment:
Q  226 taattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    |||||| |||||| |||| |||||||||||||||||||||| ||| ||||||| |||||||||||| ||| |||||| ||||||||| ||||||||    
T  14867218 taattaaacatatatcacctagaccaatactcatagaaacttaatcaaaacttctataaaatgacatattatttctc-ttgttaagtttcttcttt 14867124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 32222912 - 32223037
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagac-atatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaa 292  Q
    |||||||| |||| ||||||||| | ||||| |||||| |  ||||||||| || ||||||| ||||| |||||||||| |||||||||||||||||||     
T  32222912 aaccaaaccaaaccgcaacataataaaaacactaattaaaatatatgtcacctataccaatattcatataaactcaatgtaaacttttataaaatgacat 32223011  T
Q  293 attttttctctttgttaagtatcttcttt 321  Q
    ||||||||   ||||||||| ||||||||    
T  32223012 attttttc---ttgttaagtttcttcttt 32223037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 49641338 - 49641220
Alignment:
Q  173 gtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatga 272  Q
    |||||| |||||||||||||||||||||| ||||  | |||||||| ||| |  ||||| |  |||||||| ||||| ||||||||||||||||| |||     
T  49641338 gtttgcggtttttattttaccaaccaaaccaaaccacgacataagaaaaataccaattaaatttatgtcacctagactaatactcatagaaactccatgg 49641239  T
Q  273 aaacttttataaaatgaca 291  Q
    ||| |||||||||||||||    
T  49641238 aaatttttataaaatgaca 49641220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 18319200 - 18319289
Alignment:
Q  209 caacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttt 298  Q
    |||||||||| |||||||||||| ||||||||||  |||||||||||  |||||||||||||| ||| |||||| |||||||| ||||||    
T  18319200 caacataagaaaaacattaattaaacatatgtcatctagaccaatacaaatagaaactcaatggaaatttttatgaaatgacatattttt 18319289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 18396789 - 18396700
Alignment:
Q  209 caacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttt 298  Q
    |||||||||| |||||||||||| ||||||||||  |||||||||||  |||||||||||||| ||| |||||| |||||||| ||||||    
T  18396789 caacataagaaaaacattaattaaacatatgtcatctagaccaatacaaatagaaactcaatggaaatttttatgaaatgacatattttt 18396700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 418 - 526
Target Start/End: Complemental strand, 29233000 - 29232892
Alignment:
Q  418 ctttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttca 517  Q
    |||||| || |||||| || |||| |||||||||||| ||||||| |||||| ||| | |||||||||||||||||||| ||||| |||||||| ||| |    
T  29233000 ctttaaatttggtctacgtagttggaaacattgttggatgaaaataaaattgtaatgttggatgaaatttaaaacattgttgaaaatatgttgtttttta 29232901  T
Q  518 gctttttaa 526  Q
    ||| |||||    
T  29232900 gctgtttaa 29232892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 8484997 - 8484816
Alignment:
Q  345 ttgaacttttagagaaagat-aaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||||| |||||||| ||| ||||| ||||||||||||||||||||   |||||||||||||||||||  | | |||||||| |||||| ||  |||      
T  8484997 ttgaactcttagagaatgattaaaattttagtcttttgcatttcttataaaatatgattactttttgtccatgt-tttaattt-ggtctacgtatttgag 8484900  T
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatg-ttgtgtttcagctttttaa 526  Q
    || |||||||| || |||| |||||| ||| | |||| ||| ||||||||||||||||| |||| |||||||| | ||||||||    
T  8484899 aatattgttggatggaaataaaattgtaatgttggataaaagttaaaacattgctgaaaatatgtttgtgttttaactttttaa 8484816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 18536310 - 18536384
Alignment:
Q  245 tagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctt 320  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  18536310 tagaccaatactcatataaactaaatggaaacttttataaaatgacatattttttctc-ttgttaagtttcttctt 18536384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 305
Target Start/End: Original strand, 54273439 - 54273633
Alignment:
Q  111 aaactgcatttggttcaaatgtatttggataattttctt-attcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgc 209  Q
    |||| |||||||||||  ||||||| |||| ||||| || | ||||||| |||||| ||||  |||||| |||||||||||| ||||| ||| |||| ||    
T  54273439 aaaccgcatttggttcggatgtattcggatcattttttttactcaaccgcatgattcggtttggtttgcggtttttattttagcaaccgaaccaaaccgc 54273538  T
Q  210 aacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
    ||||||||| ||||| ||| || || ||  ||||  || | | |||||| ||||| ||||||| || ||||||| ||||||| |||||||||||||    
T  54273539 aacataagagaaacactaactaaacttagttcac-cagcctagtactcagagaaattcaatgataaattttatagaatgacatattttttctcttt 54273633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 23449488 - 23449586
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaac 206  Q
    ||||||||||||||| ||   ||||||| |||| ||||| ||| ||||||| ||| ||||||||||||||||||||| |||||||||||| ||| ||||    
T  23449488 aaaaaactgcatttgatttggatgtattcggatcatttttttactcaaccgcatggtttggttcagtttgcagttttgattttaccaaccgaaccaaac 23449586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 321
Target Start/End: Original strand, 36106070 - 36106196
Alignment:
Q  195 accaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaat 294  Q
    ||||||| |||| |||||||| || ||||  |||||| |  |||||||| ||||||||||||||||||| ||||||  |||||||||||||| | || ||    
T  36106070 accaaaccaaaccgcaacataggaaaaactctaattaaatctatgtcacctagaccaatactcatagaatctcaattgaaacttttataaaacggcatat 36106169  T
Q  295 tttttctctttgttaagtatcttcttt 321  Q
    |||||   |||||||||| ||||||||    
T  36106170 ttttttcttttgttaagtttcttcttt 36106196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 496
Target Start/End: Complemental strand, 45226700 - 45226549
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgtt 440  Q
    |||||||||| ||||||||| ||||||||||||  ||||||||||||||||  ||||  ||||||||||||     | |||||||||    |||||  ||    
T  45226700 ctatttgaacctttagagaatgataaaatcttatccttttgcatttcttacaaaataaaattactttttgttcacgtttttaatttg----tatgtaatt 45226605  T
Q  441 gtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattg 496  Q
    | |||||||||||  |||||||||||||| ||| |  |||||||||||||||||||    
T  45226604 gaaaacattgttgtatgaaaatgaaattgtaatgtttgatgaaatttaaaacattg 45226549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 320
Target Start/End: Complemental strand, 51907535 - 51907410
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    ||||||| |||||  |||||||||| || |||| |||| ||||||||||| |||| ||| |||| |   |||||||| |||||||||||||||||||| |    
T  51907535 aaccaaattaaaccacaacataagaaaatcatttattaaacatatgtcacctagaacaaaactcgtgagaactcaataaaaacttttataaaatgacaca 51907436  T
Q  294 ttttttctctttgttaagtatcttctt 320  Q
    ||||||| | ||||||||| |||||||    
T  51907435 ttttttcgc-ttgttaagtttcttctt 51907410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 515
Target Start/End: Complemental strand, 6102209 - 6102042
Alignment:
Q  347 gaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaac 446  Q
    ||||||||| |||| | |||||||||||| ||||||||||| |||  |||| |||||||| |||||   || ||| |||| | ||||||| ||||  ||     
T  6102209 gaacttttaaagaatgttaaaatcttagttttttgcatttcatacaaaataggattacttattgtccacattttttatttag-tctatgtggttgggaat 6102111  T
Q  447 attgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||| |   |||||||||| ||| | |||||||||||||||||| | ||||| ||||||||||||    
T  6102110 attgttggatattaatgaaattgtaatgttggatgaaatttaaaacatcgttgaaaatatgttgtgttt 6102042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 23625416 - 23625516
Alignment:
Q  106 gtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaa 205  Q
    |||||||| |||||| |||||| ||||| | |||| ||||| ||||||||||||||  |||||||  |||||| ||||| |||||||||||||||| |||    
T  23625416 gtaaaaaattgcattcggttcagatgtactcggatcatttttttattcaaccgtatagtttggtttggtttgcggttttgattttaccaaccaaaccaaa 23625515  T
Q  206 c 206  Q
    |    
T  23625516 c 23625516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 468
Target Start/End: Original strand, 3666828 - 3666950
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||||||||| |||| |||||||||||||| ||||||| |||| |  ||||||||||||||||||||    | |||||||| |||||||||||||   |    
T  3666828 ttgaacttttaaagaatgataaaatcttagtgttttgcacttctcatagaatatgattactttttgtccacctttttaattt-ggtctatgttgttaaga 3666926  T
Q  445 acattgttggttgaaaatgaaatt 468  Q
    || ||||| | |||||||||||||    
T  3666927 actttgtttgatgaaaatgaaatt 3666950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 1564661 - 1564769
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| ||||||||| |||||| ||||| |||||| | |||| |||  |||||||||||||||| ||| |||| ||||||||| |||||||||| |     
T  1564661 aaccaaaccaaactgcaatataagaaaaacaataattaaatatatatcatctagaccaatactcatataaattcaa-gaaaactttaataaaatgac-at 1564758  T
Q  294 ttttttctctt 304  Q
    |||||||||||    
T  1564759 ttttttctctt 1564769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 291
Target Start/End: Complemental strand, 8485262 - 8485065
Alignment:
Q  104 ctgtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttacc---------- 193  Q
    ||||||||||||||||||| |||  ||||||| | || ||||  ||| ||||||| ||| |||||| | |||||| ||||| ||||||||              
T  8485262 ctgtaaaaaactgcatttgattcggatgtattcgaatcatttatttactcaaccgcatggtttggtccggtttgcggttttgattttaccaaccgaacta 8485163  T
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||||||| |||| |||| |||||| ||||| |||| | | |||| ||   |||||||||||||||||||| |||||| ||||||| |||||||||||    
T  8485162 aaccaaaccaaaccgcaatataagaaaaacactaatcaaatatatatcctctagaccaatactcatagaaattcaatgtaaactttaataaaatgaca 8485065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 48602110 - 48602203
Alignment:
Q  196 ccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatga 289  Q
    |||||| ||||  |||||||| | |||||||||||| |||||||| || |||||||||||||| | |||||||||  ||| |||||||||||||    
T  48602110 ccaaaccaaaccacaacataaaaaaaacattaattaaacatatgttacctagaccaatactcaaataaactcaatagaaaattttataaaatga 48602203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 3999334 - 3999246
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaac 196  Q
    ||||||| |||||||||| | ||||||||| || | ||||||| ||||||  ||| |||||||| |||||| |||||||||||||||||    
T  3999334 aaaaaaccgcatttggttaagatgtatttgaatcactttcttactcaaccacatggtttggttcggtttgcggtttttattttaccaac 3999246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 441
Target Start/End: Complemental strand, 4689004 - 4688909
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttg 441  Q
    ||||||||||  | || |||||||| ||| ||||||||||||||||  |||||||||||||||||||||  || |||||||| ||| ||||||||||    
T  4689004 ttgaactttttaataatgataaaattttaatcttttgcatttcttatagaatatgattactttttgtctacatttttaattt-ggtatatgttgttg 4688909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 364 - 526
Target Start/End: Original strand, 23120023 - 23120186
Alignment:
Q  364 taaaatctta-gtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaat 462  Q
    |||||||||| |||||||||||||| ||   ||||  ||||| |||||||  | | ||||| |||| |||||||||||| |||||||||    |||||||    
T  23120023 taaaatcttaagtcttttgcatttcatagaaaatagaattacgttttgtccatgtttttaacttgg-tctatgttgttggaaacattgtaaaatgaaaat 23120121  T
Q  463 gaaattgaaatatgggatgaaatttaaaacattgctg-aaattatgttgtgtttcagctttttaa 526  Q
     |||||| |||||  |||||| ||||||||||||||| ||| |||||||||||| | ||||||||    
T  23120122 aaaattgtaatatttgatgaagtttaaaacattgctgaaaaatatgttgtgttttaactttttaa 23120186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 526
Target Start/End: Complemental strand, 45983686 - 45983527
Alignment:
Q  367 aatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaa 466  Q
    ||||||| ||||||||||||||||   |||| |||||  |||||||  | | ||||| |||| |||||||||||| |||||||||    ||||||| |||    
T  45983686 aatcttaatcttttgcatttcttagaaaataggattatgttttgtccatgtttttaacttgg-tctatgttgttggaaacattgtaaaatgaaaataaaa 45983588  T
Q  467 ttgaaatatgggatgaaatttaaaacattgctg-aaattatgttgtgtttcagctttttaa 526  Q
    ||  |||||  |||||||||||||| ||||||| ||| |||||||||||| | ||||||||    
T  45983587 ttttaatatttgatgaaatttaaaatattgctgaaaaatatgttgtgttttaactttttaa 45983527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 48685257 - 48685130
Alignment:
Q  174 tttgcagtttttattttaccaaccaaactaaactgcaacataagataaaca--ttaattagacatatgtcacatagaccaatactcatagaaactcaatg 271  Q
    ||||| |||||||||||||||||| ||  |||| ||||||||| | ||| |  || |||| || |||  ||  ||||| ||||||||||||||||||| |    
T  48685257 tttgcggtttttattttaccaaccgaatcaaaccgcaacataaaaaaaaaacgtttattaaacctataacatctagactaatactcatagaaactcaacg 48685158  T
Q  272 aaaacttttataaaatgacaaatttttt 299  Q
    | |||||||||||||||||| |||||||    
T  48685157 ataacttttataaaatgacatatttttt 48685130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 395
Target Start/End: Original strand, 54273785 - 54273833
Alignment:
Q  347 gaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaa 395  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  54273785 gaacttttagagaatgataaaatcttaggcttttgcatttcttaccgaa 54273833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 283
Target Start/End: Original strand, 54997341 - 54997481
Alignment:
Q  143 ttttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtca 242  Q
    |||| |||||||||| |||| |||| || |||||||| ||||||||||||||| | ||| || | | | ||||||| |||||||||||| || ||||||     
T  54997341 tttttttattcaaccatatggtttgattaagtttgcaatttttattttaccaatcgaaccaacccgtagcataagagaaacattaattaaacttatgtcg 54997440  T
Q  243 catagaccaatactcatagaaactcaatgaaaacttttata 283  Q
    | | |  ||||  ||||||||||||||||| ||| ||||||    
T  54997441 ccttgctcaatcttcatagaaactcaatgagaacgtttata 54997481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 320
Target Start/End: Complemental strand, 6102327 - 6102246
Alignment:
Q  237 atgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctt 320  Q
    ||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||| | |||||||||  |||||||| |||||||    
T  6102327 atgtcacctagatcaatactcataaaaattcaatgaaaacttttataaaatgac-atttttttctc-gtgttaagtttcttctt 6102246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 29701063 - 29701020
Alignment:
Q  248 accaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  29701063 accaatactcatagaagctcaatgaaaacttttataaaatgaca 29701020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 444 - 526
Target Start/End: Original strand, 23625756 - 23625838
Alignment:
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||| ||||||| |||||  ||| | |||| ||||||||||||||| ||||| |||||||||||| | ||||||||    
T  23625756 aacattgttggatgaaaataaaattataatgttggattaaatttaaaacattgttgaaaatatgttgtgttttaactttttaa 23625838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 27743524 - 27743344
Alignment:
Q  345 ttgaacttttagagaaagat-aaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc----tttatctttaatttgggtctatgttgt 439  Q
    ||||||| |||||||| ||| ||||| ||| ||||||| |||||||||  |||| ||||||||||||||    ||||| ||||      |||||  | ||    
T  27743524 ttgaactcttagagaatgattaaaattttaatcttttgtatttcttacaaaataggattactttttgtccgcgtttatattta------gtctacctagt 27743431  T
Q  440 tgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||  ||||||||||| ||||||| |||||| ||| | ||||||||||| |||||||| ||||| |||| | ||||| ||||||||||    
T  27743430 tgggaacattgttggctgaaaataaaattgtaatgttggatgaaattttaaacattgttgaaaatatgctttgttttagctttttaa 27743344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 1564560 - 1564648
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaac 196  Q
    ||||||| |||||||||||  ||||||| |||||||| | ||| | ||||| ||| |||||||| |||||| ||||| |||||||||||    
T  1564560 aaaaaaccgcatttggttcggatgtattgggataattcttttagttaaccgcatggtttggttcggtttgcggttttgattttaccaac 1564648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 7763762 - 7763806
Alignment:
Q  258 atagaaactcaatgaaaacttttataaaatgacaaattttttctc 302  Q
    ||||||||||||||||||||||||||||||||||  |||||||||    
T  7763762 atagaaactcaatgaaaacttttataaaatgacattttttttctc 7763806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 441
Target Start/End: Original strand, 7784321 - 7784396
Alignment:
Q  365 aaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttg 441  Q
    ||||||||||||| || ||||||||||  |||||||||||||||||||  | | |||||||| ||||||||||||||    
T  7784321 aaaatcttagtctattacatttcttacaaaatatgattactttttgtccatgtttttaattt-ggtctatgttgttg 7784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 15724413 - 15724278
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttacc-----aaccaaact 202  Q
    ||||||| |||||||||||  ||||| | | || ||||||||  ||||||| ||| |||||||  ||||||| |||||||||||||     ||||||||     
T  15724413 aaaaaaccgcatttggttcggatgtaatcgtatcattttcttgctcaaccgcatggtttggtttggtttgcaatttttattttaccaaccgaaccaaacc 15724314  T
Q  203 aaactgcaacataagataaacattaattagacatat 238  Q
    |||| ||||||||||| |||  ||||||| ||||||    
T  15724313 aaaccgcaacataagaaaaatgttaattaaacatat 15724278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 45464585 - 45464542
Alignment:
Q  248 accaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    ||||||||||||||||| |||||||||||||| |||||||||||    
T  45464585 accaatactcatagaaattcaatgaaaactttaataaaatgaca 45464542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 305
Target Start/End: Complemental strand, 50686909 - 50686814
Alignment:
Q  210 aacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
    |||||| || ||||||||||   ||||||| |||| || ||| |||||||| ||||||||||| |||||||||| ||| |||  ||||||||||||    
T  50686909 aacatatgagaaacattaatctaacatatgccacaaagtccagtactcatataaactcaatgagaacttttatagaatcacattttttttctcttt 50686814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 515
Target Start/End: Original strand, 19753360 - 19753430
Alignment:
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||| | ||||||| |||| | ||| | |||||||||||||||||||||||||| ||| ||||||||    
T  19753360 acattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaatatattgtgttt 19753430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 515
Target Start/End: Complemental strand, 19786446 - 19786376
Alignment:
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||| | ||||||| |||| | ||| | |||||||||||||||||||||||||| ||| ||||||||    
T  19786446 acattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaatatattgtgttt 19786376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 23119809 - 23119907
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaac 206  Q
    ||||||| ||||||||||   ||||| |  ||| ||||||||  ||||||| |||||||||||| ||||||  |||| |||||||||||| ||||||||    
T  23119809 aaaaaaccgcatttggttaggatgtaatcagatcattttcttgctcaaccgcatgatttggttcggtttgcgattttcattttaccaaccgaactaaac 23119907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 42199114 - 42199060
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatg 399  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||  |||||||    
T  42199114 ttgaacttttagagaataataaaattttagtcttttgcatttcttatagaatatg 42199060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 193
Target Start/End: Complemental strand, 45226966 - 45226836
Alignment:
Q  64 ctaaatagaaaaactgtaaactgaactaacctaact-aaagctgtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatg 162  Q
    ||||||||||||| || ||||| ||| |||| || | ||| | | ||||||||||||||| |||| |||||||   || ||||  ||| |||||| ||||    
T  45226966 ctaaatagaaaaattgcaaactaaaccaacccaaattaaaaccgcaaaaaactgcatttgattcagatgtattcatatcatttctttactcaaccatatg 45226867  T
Q  163 atttggttcagtttgcagtttttattttacc 193  Q
    |||||||| |||||||  |||||||||||||    
T  45226866 atttggtttagtttgcgatttttattttacc 45226836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 7783766 - 7783883
Alignment:
Q  174 tttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaa 273  Q
    |||||||| || |||||| ||| ||||| |||| | || |||||| ||||||| |||| || |||| ||| |||  ||||||  | | |||||| |||||    
T  7783766 tttgcagtgttaattttatcaatcaaaccaaaccgtaatataagaaaaacatttattaaacctatgccacctaggtcaataccgacacaaactcgatgaa 7783865  T
Q  274 aacttttataaaatgaca 291  Q
    ||||||||||||||||||    
T  7783866 aacttttataaaatgaca 7783883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 1920231 - 1920279
Alignment:
Q  237 atgtcacatagaccaatactcatagaaactcaatgaaaacttttataaa 285  Q
    ||||||| ||| | |||||||||| ||||||||||||||||||||||||    
T  1920231 atgtcacctaggcaaatactcataaaaactcaatgaaaacttttataaa 1920279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 5122021 - 5122090
Alignment:
Q  233 acatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    ||||| ||||| |||| |||||||||||  ||||| ||| ||| ||||||||||||||| ||||||||||||    
T  5122021 acataagtcacctagatcaatactcata--aactcgatgtaaaattttataaaatgacatattttttctctt 5122090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 299
Target Start/End: Original strand, 11031215 - 11031351
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaa 263  Q
    ||||||||||||||| ||||| |||||| ||||  ||| ||||||||||||||||  |   ||||||  || |||||| | || ||||  ||||| | ||    
T  11031215 tttggttcagtttgcggttttcattttatcaactgaaccaaactgcaacataagaagagtgttaattgcacctatgtcccctaaaccagcactcacataa 11031314  T
Q  264 actcaatgaaaacttttat-aaaatgacaaatttttt 299  Q
    ||| ||| ||||||||||| ||||||||| |||||||    
T  11031315 acttaataaaaacttttataaaaatgacatatttttt 11031351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 17845371 - 17845280
Alignment:
Q  174 tttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaact 266  Q
    ||||| |||||||||||| |||||||| ||||| |||| |||||| |||  |||||| ||  ||| ||||||| ||||||||||||| |||||    
T  17845371 tttgcggtttttattttatcaaccaaattaaaccgcaatataagaaaaatgttaatt-gaactatctcacataaaccaatactcataaaaact 17845280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 40494734 - 40494670
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattacttttt 409  Q
    ||||||||| |||||| || ||||||||| | || |||||||||||  |||||||||||||||||    
T  40494734 ttgaactttaagagaatgacaaaatcttaattttgtgcatttcttatagaatatgattacttttt 40494670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 478 - 526
Target Start/End: Complemental strand, 45464386 - 45464338
Alignment:
Q  478 gatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||||||||||||| ||| |||||| ||||| ||||||||||    
T  45464386 gatgaaatttaaaacattgctaaaaatatgttatgttttagctttttaa 45464338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 484
Target Start/End: Original strand, 48653629 - 48653747
Alignment:
Q  365 aaaatcttagtcttttgcatttcttaccgaatatgattacttttt-gtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatg 463  Q
    ||||||||||||||||| |||||| ||  |||| ||||||||||| |||    | |||||||||| ||||||| |||| |||||||||||| |||||||     
T  48653629 aaaatcttagtcttttgtatttctaacaaaataagattacttttttgtccacgtttttaatttgg-tctatgtagttg-aaacattgttggatgaaaata 48653726  T
Q  464 aaattgaaatatgggatgaaa 484  Q
    |||||| ||| | ||||||||    
T  48653727 aaattgtaatgttggatgaaa 48653747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 1920336 - 1920402
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||||||||||||||  |||||||||||  ||||| ||||||||||||  || ||||||||||||||    
T  1920336 ttgaacttttagagaataataaaatctta-acttttacatttcttaccgtctaggattactttttgtc 1920402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 10777887 - 10778002
Alignment:
Q  116 gcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacata 215  Q
    ||||||| |||| ||||||| ||||||| || ||| ||||||| ||| |    ||| | |||| |||||||||||| ||||| ||| ||||  |||||||    
T  10777887 gcatttgattcagatgtattcggataatatttttactcaaccgcatggtacaattcggcttgcggtttttattttagcaaccgaaccaaaccacaacata 10777986  T
Q  216 agataaacattaatta 231  Q
    ||||||||| ||||||    
T  10777987 agataaacactaatta 10778002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 293
Target Start/End: Complemental strand, 40494895 - 40494797
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||  ||||| |||||||||| |||   || ||| | ||||||||| ||||||||||||| |||||  ||||| | ||||||||||||||||||||    
T  40494895 aaccaaaacaaactacaacataagaaaaatgctagttaaaaatatgtcacttagaccaatactcttagaacttcaat-ataacttttataaaatgacaaa 40494797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 511
Target Start/End: Complemental strand, 53934971 - 53934807
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    |||||||||||||  | |||||||||||| |||||||| | |||||   |||||||||||||||| ||   || ||||  || ||||||||| ||||  |    
T  53934971 ttgaacttttagatgatgataaaatcttaatcttttgcctatcttataaaatatgattactttttatccacattttta--tttggtctatgtagttgaga 53934874  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgt 511  Q
    | |||||||| ||| ||||||||||     |  ||||||||||||||||||| | ||| ||||||||    
T  53934873 atattgttggatgataatgaaattgttccgttagatgaaatttaaaacattggtcaaaatatgttgt 53934807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 45464740 - 45464642
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaac 206  Q
    |||||||||||||||||||| || ||||||||| | ||| ||| |||| |  ||| ||||||||| ||| | ||||| |||||| ||||| ||| ||||    
T  45464740 aaaaaactgcatttggttcagatatatttggatcacttttttactcaatcacatggtttggttcaatttacggttttgattttatcaaccgaaccaaac 45464642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 486
Target Start/End: Original strand, 5122140 - 5122280
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||||||||| | || ||||||| ||||||||||||||| | ||||  ||||  |||||||||||||    | |||||||| ||| ||| |||||| ||    
T  5122140 ttgaacttttatataatgataaaaccttagtcttttgcatcttttacaaaatagaattactttttgtccacgtttttaattt-ggtttatattgttggaa 5122238  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatt 486  Q
    |||| || |  |||||||||||||| ||| |  |||||||||    
T  5122239 acatcgtagaatgaaaatgaaattgtaatgtttgatgaaatt 5122280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 410
Target Start/End: Original strand, 7764209 - 7764254
Alignment:
Q  365 aaaatcttagtcttttgcatttcttaccgaatatgattactttttg 410  Q
    |||||||||||||||| |||||||||   |||||||||||||||||    
T  7764209 aaaatcttagtcttttacatttcttataaaatatgattactttttg 7764254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 9058623 - 9058556
Alignment:
Q  253 tactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||||| ||| ||||||| ||||||||| || ||||||| |||||||| ||||||||| |||||||||    
T  9058623 tactcataaaaagtcaatgagaacttttat-aagtgacaaagtttttctc-ttgttaagtttcttctttg 9058556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 15986092 - 15986177
Alignment:
Q  116 gcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaac 201  Q
    ||||||| |||  ||||||| |||| | ||| ||||||||||| ||| ||||||||||||||| ||||  ||||| | ||||||||    
T  15986092 gcatttgattcggatgtattcggatcaattttttattcaaccgcatggtttggttcagtttgcggtttcgattttgcaaaccaaac 15986177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 508
Target Start/End: Complemental strand, 20986649 - 20986560
Alignment:
Q  419 tttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgt 508  Q
    ||||| || |||||| || ||||  ||||| ||||| || |||| |||||  ||| | |||||||||||||||||||||||||| |||||    
T  20986649 tttaaatttggtctacgtagttgggaacatcgttggatggaaataaaattataatgttggatgaaatttaaaacattgctgaaaatatgt 20986560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 409
Target Start/End: Complemental strand, 28148069 - 28148024
Alignment:
Q  364 taaaatcttagtcttttgcatttcttaccgaatatgattacttttt 409  Q
    |||||| ||||||||||| |||||||||  ||||||||||||||||    
T  28148069 taaaattttagtcttttgaatttcttacaaaatatgattacttttt 28148024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 386
Target Start/End: Original strand, 48602269 - 48602310
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcattt 386  Q
    ||||||||||||| || |||||||||||||| ||||||||||    
T  48602269 ttgaacttttagataatgataaaatcttagttttttgcattt 48602310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 298
Target Start/End: Original strand, 48653565 - 48653598
Alignment:
Q  265 ctcaatgaaaacttttataaaatgacaaattttt 298  Q
    ||||||||||||||||||||||||||| ||||||    
T  48653565 ctcaatgaaaacttttataaaatgacatattttt 48653598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 386
Target Start/End: Complemental strand, 49641156 - 49641115
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcattt 386  Q
    ||||||||||||| || ||||||||||||||||||| |||||    
T  49641156 ttgaacttttagataatgataaaatcttagtcttttacattt 49641115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 4642997 - 4642945
Alignment:
Q  143 ttttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaa 195  Q
    |||| ||| ||||||| ||| |||||||||||||| |||||| ||||||||||    
T  4642997 tttttttactcaaccgcatggtttggttcagtttgtagttttgattttaccaa 4642945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 15724273 - 15724225
Alignment:
Q  256 tcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||||||||||||||| ||||||||||||||| ||| | ||||| ||||    
T  15724273 tcatagaaactcaatggaaacttttataaaattacatactttttatctt 15724225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 25686024 - 25686131
Alignment:
Q  143 ttttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaac-----tgcaacataagataaacattaattagacata 237  Q
    |||| ||| ||||||  ||| |||||||  |||||| ||||||||||||| |||||||| ||||     |||||||||||| ||||| |||||| |||||    
T  25686024 tttttttactcaaccacatggtttggtttggtttgcggtttttattttac-aaccaaaccaaaccaagttgcaacataagaaaaacactaattaaacata 25686122  T
Q  238 tgtcacata 246  Q
    || ||||||    
T  25686123 tgccacata 25686131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 53935128 - 53935020
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca-a 292  Q
    |||||||  ||| |||||||||||| ||| || ||||| ||||||||||| |  ||||||||||  | ||  ||||||||||||||||| ||||||||      
T  53935128 aaccaaatcaaattgcaacataaga-aaatatgaattaaacatatgtcacgtgaaccaatactcgaaaaa--tcaatgaaaacttttatgaaatgacatt 53935032  T
Q  293 attttttctctt 304  Q
    ||||||||||||    
T  53935031 attttttctctt 53935020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 7e-44; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 116 - 322
Target Start/End: Original strand, 15320111 - 15320316
Alignment:
Q  116 gcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacata 215  Q
    ||||||||||   |||||||  ||||||||| ||| ||||||  ||| |||||||  |||||| ||||||||||||||| |  ||| |||| ||||||||    
T  15320111 gcatttggttaggatgtattcagataatttttttactcaaccacatggtttggtttggtttgcggtttttattttaccatctgaaccaaaccgcaacata 15320210  T
Q  216 agataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatc 315  Q
    ||| |||||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||| || |||||||||| ||| ||||| ||    
T  15320211 agaaaaacattaattaaacatatgtcacctagacccatacttatagaaactcaatgaaaacttttataaaatggcatattttttctc-ttgataagtttc 15320309  T
Q  316 ttctttg 322  Q
    |||||||    
T  15320310 ttctttg 15320316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 106 - 299
Target Start/End: Original strand, 12041102 - 12041295
Alignment:
Q  106 gtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaa 205  Q
    ||||||||| ||||||||||   ||||||| |||| | ||| ||| ||||||| ||  |||||||  |||||| ||||| |||||||||||||||| |||    
T  12041102 gtaaaaaaccgcatttggtttggatgtattcggatcacttttttactcaaccgcatagtttggtttggtttgcggttttcattttaccaaccaaaccaaa 12041201  T
Q  206 ctgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttttt 299  Q
    | ||||||||||| |||| ||||||| |  |||||||  ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  12041202 ccgcaacataagaaaaactttaattaaatctatgtcatctagaccattactcatagaaactcaatgaaaacttttataaaacgacaaatttttt 12041295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 44085811 - 44085631
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||| |||||||||| |||||||||| ||||||||| |||||||||  |||| |||||| |||||||| |   ||||| |||| |||||||||||| ||    
T  44085811 ttgaaattttagagaatgataaaatctcagtcttttgtatttcttacaaaataggattacgttttgtctatgcttttaaattgg-tctatgttgttgaaa 44085713  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||    |||||||||||||  |||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  44085712 acattgtaaaatgaaaatgaaattataatatttgatgaaatttaaaacattgctgaaaatatgttgtgtttcggctttttaa 44085631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 13194386 - 13194259
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| ||||  |||||||||| |||| ||||||| | ||||  ||| |||||||||||||||||||| |||||| ||||||||||||||||||| |    
T  13194386 aaccaaaccaaaccacaacataagaaaaactttaattaaatatat--cacctagaccaatactcatagaaaatcaatggaaacttttataaaatgacata 13194289  T
Q  294 ttttttctct-ttgttaagtatcttctttg 322  Q
    |||||||||| ||||||||| |||||||||    
T  13194288 ttttttctctcttgttaagtttcttctttg 13194259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 152 - 303
Target Start/End: Original strand, 10242307 - 10242458
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagacca 251  Q
    ||||||| ||| |||||||  || ||| |||||||||||||||||||||| |||| ||||||||||| ||| |||||| | | | ||||||  || | ||    
T  10242307 tcaaccgcatgttttggtttggtctgcggtttttattttaccaaccaaaccaaacagcaacataagaaaaatattaatcaaaaacatgtcagttaaatca 10242406  T
Q  252 atactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct 303  Q
     ||||||||||||||||||  ||||||||||||||||| | |||||||||||    
T  10242407 gtactcatagaaactcaattgaaacttttataaaatgatatattttttctct 10242458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 152 - 322
Target Start/End: Original strand, 27301049 - 27301218
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagacca 251  Q
    ||||||| ||| |||||||  |||||| ||||| ||||||| |||||||| |||| ||||||||||| ||| |||||||| |   ||||||| |||| ||    
T  27301049 tcaaccgcatggtttggtttggtttgcggttttcattttacaaaccaaaccaaacagcaacataagaaaaatattaattaaattcatgtcacctagatca 27301148  T
Q  252 atactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||||||||||||| ||| ||||| ||| ||||| ||| ||||| |||| ||||||||  |||||||||    
T  27301149 atactcatagaaactccatggaaactattaaaaaattacatattttctctc-ttgttaagcttcttctttg 27301218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 345 - 495
Target Start/End: Original strand, 30514700 - 30514849
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||| | |||||| |||| ||||||||    | ||||| ||  ||||||||||| | ||    
T  30514700 ttgaacttttagagaatgataaaatcttaatcttttgtatttcttgcagaatattattagtttttgtccacgtttttaagtt-agtctatgttgtgggaa 30514798  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacatt 495  Q
    |||||||||| || ||||||||||| ||| | | |||||||||||||||||    
T  30514799 acattgttggatggaaatgaaattgtaatgttgaatgaaatttaaaacatt 30514849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 22014428 - 22014317
Alignment:
Q  209 caacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgtt 308  Q
    |||||||||| |||||||||||| |  |||||||  |||| |||||||||||||| ||||||| ||||||||||||||||||| | |||||||| |||||    
T  22014428 caacataagaaaaacattaattaaatttatgtcatctagatcaatactcatagaatctcaatggaaacttttataaaatgacata-tttttctc-ttgtt 22014331  T
Q  309 aagtatcttctttg 322  Q
    |||| |||||||||    
T  22014330 aagtttcttctttg 22014317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 341 - 412
Target Start/End: Original strand, 11377415 - 11377486
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  11377415 ctatttgaacttttagagaatgataaaatcttagtcttttgtatttcttacagaataggattattttttgtc 11377486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 41166638 - 41166511
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| ||||  |||||||| | || || |||||| |  |||||||| |||||||||| ||||||||||||||||||   |||||||||||||||      
T  41166638 aaccaaaccaaaccacaacataataaaagcactaattaaatttatgtcacctagaccaatattcatagaaactcaatgaatttttttataaaatgacatg 41166539  T
Q  294 ttttttctctttgttaagtatcttctttg 322  Q
    ||||||||| ||||||||| |||||||||    
T  41166538 ttttttctc-ttgttaagtttcttctttg 41166511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 44085973 - 44085866
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| ||||||||||| |||  ||||||| | |||| |||| ||||||||||||| | |||| |||||  ||||||||||||||||||| |    
T  44085973 aaccaaaccaaaccgcaacataagaaaaatgttaattaaaaatatctcacctagaccaatactcgtggaaattcaattgaaacttttataaaatgacata 44085874  T
Q  294 ttttttct 301  Q
    ||||||||    
T  44085873 ttttttct 44085866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 27898778 - 27898712
Alignment:
Q  233 acatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttttt 299  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  27898778 acataagtcacctagatcaatactcatagaaactcaatgaaaacttttataaaattacatatttttt 27898712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 194 - 285
Target Start/End: Complemental strand, 1331475 - 1331385
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaa 285  Q
    |||||||| |||| ||||||||||| ||||| |||||| |  ||||| |||||||| ||||||||||| ||||||||| |||||||||||||    
T  1331475 aaccaaaccaaaccgcaacataagaaaaacactaattaaatctatgttacatagacaaatactcatag-aactcaatggaaacttttataaa 1331385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 129 - 322
Target Start/End: Original strand, 11050934 - 11051132
Alignment:
Q  129 atgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaa-----ccaaactaaactgcaacataagataaa- 222  Q
    ||||||| | || ||||| ||| ||||| ||| |||||||||  |||||  ||||||||||||| ||     |||||| ||||||  |||||||| |||     
T  11050934 atgtattcgaatgatttttttactcaactgtaggatttggtttggtttgtggtttttattttactaattgaaccaaaccaaactgtgacataagaaaaaa 11051033  T
Q  223 cattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    || |||||| |  |||||||| ||||||||||||  || ||||||||| ||||||||||| ||||||||  ||||||||| | ||||||| |||||||||    
T  11051034 cactaattaaatctatgtcacttagaccaatacttttaaaaactcaataaaaacttttatgaaatgacatgttttttctc-tcgttaagtttcttctttg 11051132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 237 - 304
Target Start/End: Original strand, 36500270 - 36500337
Alignment:
Q  237 atgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||||||||| || |||| |||||||    
T  36500270 atgtcacctagactaatactaatagaaactcaatgaaaacttttataaaatggcatatttgttctctt 36500337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 12841826 - 12841716
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| | || ||||||||||| |||  ||||||| |||||| |||| |||||||||||| ||| | | |||||| ||||| ||||||||||||| |    
T  12841826 aaccaaaccacaccgcaacataagaaaaatgttaattaaacatatctcacgtagaccaatacttatatatattcaatggaaactgttataaaatgacata 12841727  T
Q  294 ttttttctctt 304  Q
    | |||||||||    
T  12841726 tattttctctt 12841716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 31719720 - 31719789
Alignment:
Q  235 atatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||||| || |||||||||||| ||||||||||| || |||||||| |||||||||| ||||||||||||    
T  31719720 atatgttacctagaccaatacttatagaaactcagtggaaacttttgtaaaatgacatattttttctctt 31719789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 1537027 - 1536964
Alignment:
Q  236 tatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttttt 299  Q
    |||||||| ||||| ||||||| ||| |||||||| |||||||||||||||||||| |||||||    
T  1537027 tatgtcacctagacgaatactcgtaggaactcaataaaaacttttataaaatgacatatttttt 1536964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 11678321 - 11678141
Alignment:
Q  345 ttgaacttttagagaaagata-aaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||||| |||||||| |||| |||  ||||||||||| |||||||||  |||||||||||||||||||    |  |||| || | |||| || ||||      
T  11678321 ttgaactcttagagaatgatagaaaatttagtcttttgtatttcttacaaaatatgattactttttgtccgcgt--ttaaatttgctctacgtagttggg 11678224  T
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
     |||||||||| ||||||| |||||| |||   ||||||||||||||| |||| ||||| |||||| | ||| ||||||||||    
T  11678223 tacattgttggatgaaaataaaattgtaatgctggatgaaatttaaaatattgttgaaaatatgttcttttttagctttttaa 11678141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 11695799 - 11695619
Alignment:
Q  345 ttgaacttttagagaaagata-aaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||||| |||||||| |||| |||  ||||||||||| |||||||||  |||||||||||||||||||    |  |||| || | |||| || ||||      
T  11695799 ttgaactcttagagaatgatagaaaatttagtcttttgtatttcttacaaaatatgattactttttgtccgcgt--ttaaatttgctctacgtagttggg 11695702  T
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
     |||||||||| ||||||| |||||| |||   ||||||||||||||| |||| ||||| |||||| | ||| ||||||||||    
T  11695701 tacattgttggatgaaaataaaattgtaatgctggatgaaatttaaaatattgttgaaaatatgttcttttttagctttttaa 11695619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 28790977 - 28790930
Alignment:
Q  153 caaccgtatgatttggttcagtttgcagtttttattttaccaaccaaa 200  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  28790977 caaccgtatgatttggttcggtttgcggtttttattttaccaaccaaa 28790930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 20496856 - 20496774
Alignment:
Q  209 caacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||||||| | ||||| |||||| || ||||||||  ||| |||||||||||||||||||| | ||||| |||||||||||||    
T  20496856 caacataacagaaacaataattaaacttatgtcactcagatcaatactcatagaaactcaacggaaactattataaaatgaca 20496774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 17763186 - 17763120
Alignment:
Q  236 tatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||||| | ||||||||||||||||||||||| |  |||||||||| ||||||||| ||||||||||||    
T  17763186 tatgtcgcttagaccaatactcatagaaactcta--aaaacttttacaaaatgacatattttttctctt 17763120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 1331317 - 1331250
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||||||||| ||||  |||||||||||||||||| ||||||||||  ||||  |||||||||||||    
T  1331317 ttgaacttttaaagaataataaaatcttagtcttttacatttcttacataatagaattactttttgtc 1331250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 492
Target Start/End: Original strand, 15320345 - 15320500
Alignment:
Q  341 ctatttgaactttt-agagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatc----tttaatttgggtctatg 435  Q
    ||| |||||||||| || ||| | |||||||||||||||||| |||||||||  |||||||||||||||| | ||| ||    ||||| || ||| ||||    
T  15320345 ctacttgaactttttagtgaatgttaaaatcttagtcttttgtatttcttacaaaatatgattacttttt-tttttttcacgttttaaatttggtgtatg 15320443  T
Q  436 ttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaac 492  Q
    | |||| |||  || ||  ||||||||||||||| ||| | ||||||||||||||||    
T  15320444 tagttggaaatttttttaattgaaaatgaaattgtaatgttggatgaaatttaaaac 15320500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 12884857 - 12884775
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaac 276  Q
    |||||||| |||| |||| ||| || ||||| |||||| | |||| |||| |||||||||||| |||||||||||||| ||||    
T  12884857 aaccaaaccaaaccgcaatatatgaaaaacactaattaaatatatatcacctagaccaatacttatagaaactcaatggaaac 12884775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 299
Target Start/End: Complemental strand, 29172166 - 29172064
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||||||||||||| |||||| ||||| |||||| | ||||  || |||||| |||| | |||||||||||||||||| ||| |||| |||||  |    
T  29172166 aaccaaactaaactgcaatataaga-aaacaataattaaatatat--catatagactaataattatagaaactcaatgaaaattttaataatatgactta 29172070  T
Q  294 tttttt 299  Q
    ||||||    
T  29172069 tttttt 29172064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 43452575 - 43452483
Alignment:
Q  224 attaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttc 318  Q
    |||||||| |||||||||||  ||||||||| | |||||||||||||| ||| |||||| ||| |||| ||||||||| |||| ||||| |||||    
T  43452575 attaattaaacatatgtcaccaagaccaatatttatagaaactcaatgcaaatttttatgaaa-gacatattttttct-tttgataagtttcttc 43452483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 266
Target Start/End: Original strand, 30759183 - 30759320
Alignment:
Q  129 atgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaa 228  Q
    |||||||| ||| | ||| ||| ||||||| ||| ||||||||  ||| || |||||| |||||||||  |||  ||| ||||||||||| |||  ||||    
T  30759183 atgtatttagatcacttttttactcaaccgcatggtttggttcgatttacaatttttactttaccaacagaaccgaaccgcaacataagaaaaatgttaa 30759282  T
Q  229 ttagacatatgtcacatagaccaatactcatagaaact 266  Q
    ||  || ||||||||||| |||||||||| || |||||    
T  30759283 ttgaacttatgtcacataaaccaatactcgtataaact 30759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 496
Target Start/End: Original strand, 5862525 - 5862577
Alignment:
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattg 496  Q
    ||||||||||| ||||||| |||||| ||| | ||||||||||||||||||||    
T  5862525 aacattgttggatgaaaataaaattgtaatgttggatgaaatttaaaacattg 5862577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 12884712 - 12884676
Alignment:
Q  479 atgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||||||||||||||||||| ||||||||||||    
T  12884712 atgaaatttaaaacattgctgaaaatatgttgtgttt 12884676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 502
Target Start/End: Original strand, 21480649 - 21480705
Alignment:
Q  446 cattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaa 502  Q
    ||||||||  |||||||||||||||||| |  ||||||||||||||||||| |||||    
T  21480649 cattgttgcatgaaaatgaaattgaaatgtttgatgaaatttaaaacattgttgaaa 21480705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 26316642 - 26316554
Alignment:
Q  203 aaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||||||||||||||| ||| |||||||| || ||||||||  | || |||| ||||| ||| |||| || |||||||||| |||||||    
T  26316642 aaactgcaacataagagaaatattaattaaacttatgtcactcaaactaatattcatataaattcaacgagaacttttatagaatgaca 26316554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 27962261 - 27962336
Alignment:
Q  175 ttgcagtttttatttta-----ccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacata 246  Q
    |||||||||||||||||     | ||||||||||||||||||||||||| |||||||||||| |  |||||||||||    
T  27962261 ttgcagtttttattttatcaaccaaaccaaactaaactgcaacataaga-aaacattaattaaatctatgtcacata 27962336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 32646859 - 32646795
Alignment:
Q  167 ggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaatta 231  Q
    |||||| ||||| |||||||||||| ||||  ||| |||| ||||||||||||||||| ||||||    
T  32646859 ggttcaatttgcggtttttattttaacaactgaaccaaaccgcaacataagataaacaataatta 32646795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 299
Target Start/End: Original strand, 5862318 - 5862361
Alignment:
Q  256 tcatagaaactcaatgaaaacttttataaaatgacaaatttttt 299  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  5862318 tcataggaactcaatgaaaactttaataaaatgacatatttttt 5862361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 7162273 - 7162332
Alignment:
Q  181 tttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgt 240  Q
    ||||||||||||| | || ||||||||||||||||||| ||||  |||||| ||||||||    
T  7162273 tttttattttaccgatcagactaaactgcaacataagagaaacgctaattaaacatatgt 7162332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 425
Target Start/End: Original strand, 21734278 - 21734341
Alignment:
Q  362 gataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatt 425  Q
    |||||||| ||| |||||| |||||||||| |||||||||||| |||||||  ||| |||||||    
T  21734278 gataaaatattattcttttacatttcttacagaatatgattaccttttgtccatatttttaatt 21734341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 22014281 - 22014218
Alignment:
Q  348 aacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgt 411  Q
    |||||||| ||||  ||||||||||||||||||  |||||||||  ||||| ||||||||||||    
T  22014281 aacttttaaagaataataaaatcttagtcttttaaatttcttacataatataattactttttgt 22014218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 36964308 - 36964241
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    |||||||||| ||||| |||||||||||||||||||  | |||||||  |||||||||| ||| ||||    
T  36964308 ttgaactttttgagaatgataaaatcttagtcttttatacttcttacataatatgattaatttctgtc 36964241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 526
Target Start/End: Complemental strand, 41461304 - 41461221
Alignment:
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaa-tttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||| ||| ||||||| |||||| ||| | |||||||| ||||||| ||| | |||| |||||||||||| ||||||||||    
T  41461304 aacattggtggatgaaaataaaattgtaatgttggatgaaaatttaaaatattacggaaaatatgttgtgttttagctttttaa 41461221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 526
Target Start/End: Original strand, 6946407 - 6946485
Alignment:
Q  448 ttgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||| |||||||||||||  ||| | ||||||||| |||||||||| || || || ||||||||| | ||||||||    
T  6946407 ttgttgggtgaaaatgaaattttaatgttggatgaaatataaaacattgttggaaataagttgtgttttacctttttaa 6946485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 526
Target Start/End: Original strand, 24725658 - 24725735
Alignment:
Q  448 ttgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||| ||||||||||||| || | | ||||||||| ||||||||||||| || |||||||| ||| | ||||||||    
T  24725658 ttgttgggtgaaaatgaaatttaa-tgttggatgaaatataaaacattgctggaaatatgttgtcttttaactttttaa 24725735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 526
Target Start/End: Original strand, 27301349 - 27301419
Alignment:
Q  456 tgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||||||||| ||||||  |||||||| |||||||||  |||| ||| |||||||| | ||||||||    
T  27301349 tgaaaatgaaattgtaatatgaaatgaaattaaaaacattgtcgaaaatattttgtgttttacctttttaa 27301419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 30761179 - 30761261
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacata 246  Q
    ||||||||||||||| ||||||| |||||||||  ||| |||| ||||||||||| |||   |||||  || |||||||||||    
T  30761179 tttggttcagtttgcggtttttactttaccaacagaaccaaaccgcaacataagaaaaatgataattgaacctatgtcacata 30761261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 454
Target Start/End: Original strand, 44741840 - 44741949
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttag-tcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||| |||||||||| ||||||||||||| | |||||||||| |||  | ||||||||||||| ||||  | | |||||||| ||| ||| |||||||     
T  44741840 ttgaatttttagagaatgataaaatcttagtttttttgcattttttataggatatgattactttatgtccatgtttttaattt-ggtttatattgttgtg 44741938  T
Q  444 aacattgttgg 454  Q
    ||||| |||||    
T  44741939 aacatcgttgg 44741949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 11678417 - 11678377
Alignment:
Q  258 atagaaactcaatgaaaacttttataaaatgacaaattttt 298  Q
    |||||||||||||| ||||||| ||||||||||| ||||||    
T  11678417 atagaaactcaatgcaaactttaataaaatgacatattttt 11678377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 11695895 - 11695855
Alignment:
Q  258 atagaaactcaatgaaaacttttataaaatgacaaattttt 298  Q
    |||||||||||||| ||||||| ||||||||||| ||||||    
T  11695895 atagaaactcaatgcaaactttaataaaatgacatattttt 11695855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 1e-42; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 108 - 322
Target Start/End: Original strand, 7169593 - 7169808
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtat-gatttggttcagtttgcagtttttattttaccaaccaaactaaac 206  Q
    ||||||| ||| |||||||  ||||||| |||| ||||| ||| ||||||| || | |||||||| |||||||||||| |||||||||||| ||| ||||    
T  7169593 aaaaaaccgcaattggttcggatgtattcggatcatttttttaatcaaccgcattggtttggttcggtttgcagttttgattttaccaaccgaaccaaac 7169692  T
Q  207 tgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaat-tttttctcttt 305  Q
    ||||| |||||| ||||| |||||| | |||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| |     
T  7169693 tgcaatataagaaaaacactaattaaatatatatcatatagaccaatactcatagaaattcaatgaaaactttaataaaatgacatatatttttctc-tc 7169791  T
Q  306 gttaagtatcttctttg 322  Q
    ||||||| |||||||||    
T  7169792 gttaagtttcttctttg 7169808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 4577605 - 4577448
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaa 263  Q
    |||||||| |||||||||||||||||||  ||||||||||||| ||||||||||| ||||  |||||| || ||  |||  |||||||||||||||||||    
T  4577605 tttggttcggtttgcagtttttattttattaaccaaactaaaccgcaacataagaaaaacgctaattaaacctaattcaggtagaccaatactcatagaa 4577506  T
Q  264 actcaatgaaaacttttataaaatgacaaatt-ttttctctttgttaagtatcttcttt 321  Q
    | ||||||||||||||||||||| |||| ||| ||||||| ||||||| | ||||||||    
T  4577505 attcaatgaaaacttttataaaacgacatattattttctc-ttgttaattttcttcttt 4577448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 152 - 322
Target Start/End: Original strand, 12108137 - 12108305
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagacca 251  Q
    |||||| |||| |||| ||  |||||| ||||| |||||| ||||||||| |||| ||||||||| | |||||  ||||| |  ||||| || |||||||    
T  12108137 tcaaccttatggtttgatttggtttgcggttttcattttatcaaccaaaccaaaccgcaacataataaaaacacaaattaaatttatgtaacctagacca 12108236  T
Q  252 atactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| |||||||||    
T  12108237 atactcatagaaactcaatgaaaa-ttttataaaatgacatattttttctc-ttgttaagtttcttctttg 12108305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 19134615 - 19134829
Alignment:
Q  111 aaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc-----aaactaaa 205  Q
    |||||||||||||||   ||||| | |||| | ||| ||  ||||||||||| |||||||  |||||||||||| ||||||||||||     |||| |||    
T  19134615 aaactgcatttggtttggatgtactaggattactttttttctcaaccgtatggtttggtttggtttgcagttttcattttaccaaccgaaccaaaccaaa 19134714  T
Q  206 ctgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
    | ||||||||||| ||||| |||||| |  |||||||| ||||  |||||||||||||||| |||| |||||||||| |||||||| |||||||||| ||    
T  19134715 ccgcaacataagaaaaacactaattaaatctatgtcacctagataaatactcatagaaacttaatggaaacttttat-aaatgacatattttttctc-tt 19134812  T
Q  306 gttaagtatcttctttg 322  Q
    ||||||| |||||||||    
T  19134813 gttaagtttcttctttg 19134829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 345 - 526
Target Start/End: Original strand, 13532034 - 13532214
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||| ||||| |||| |||||||||||| |||||||||||||||||  |||| ||||||  ||||||  |   ||||| || ||||||| |||||| ||    
T  13532034 ttgaaattttatagaatgataaaatcttaatcttttgcatttcttacaaaataggattacgatttgtccatgattttaactt-ggtctattttgttggaa 13532132  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||    |||||||||||||| |||||  ||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  13532133 acattgtaaaatgaaaatgaaattgtaatatttgatgaaatttaaaacattgctgaaaatttgttgtgtttcggctttttaa 13532214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 30753083 - 30752964
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaa 263  Q
    ||||||||||||||| |||||||||||||||||| ||| |||| ||||||||||| ||||||||| || |  ||| ||||||| ||||||||||||||||    
T  30753083 tttggttcagtttgcggtttttattttaccaaccgaaccaaaccgcaacataagaaaaacattaactaaatctatatcacataaaccaatactcatagaa 30752984  T
Q  264 actcaatgaaaacttttata 283  Q
    ||  |||| |||||||||||    
T  30752983 acataatggaaacttttata 30752964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 322
Target Start/End: Complemental strand, 29049089 - 29048903
Alignment:
Q  129 atgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaa 228  Q
    |||||||||||| ||||| ||| ||||||| ||| |||||||  |||||| ||||| ||||||||| ||||||      |||| ||| || |||||||||    
T  29049089 atgtatttggatcatttttttactcaaccgcatggtttggtttggtttgcggttttgattttaccagccaaacc-----gcaatataggaaaaacattaa 29048995  T
Q  229 ttagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    ||| | |||| |||  |||||||||||||||| |||||||||||||||||| |||||||||| | |||||||||  |||||||| |||||||||    
T  29048994 ttaaatatatatcatttagaccaatactcataaaaactcaatgaaaactttaataaaatgac-atttttttctc-atgttaagtttcttctttg 29048903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 142 - 290
Target Start/End: Original strand, 13531814 - 13531967
Alignment:
Q  142 attttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact-----gcaacataagataaacattaattagacat 236  Q
    ||||||||  ||||||| ||| |||||||  ||||||  |||| |||||||||||||||| ||||      ||||||||||| |||  ||||||| ||||    
T  13531814 attttcttgctcaaccgcatggtttggtttggtttgcgattttcattttaccaaccaaaccaaaccaaaccgcaacataagaaaaatgttaattaaacat 13531913  T
Q  237 atgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgac 290  Q
    || |||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  13531914 atctcacctagaccaatactcatagaaattcaatggaaacttttataaaatgac 13531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 362 - 526
Target Start/End: Complemental strand, 20500867 - 20500704
Alignment:
Q  362 gataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaa 461  Q
    |||||||||||| |||||||||||||||||  ||||   |||| |||||||  | | ||||| || |||||||||||||  |||||||||    ||||||    
T  20500867 gataaaatcttaatcttttgcatttcttacaaaataaacttacgttttgtccatgtttttaactt-ggtctatgttgttagaaacattgtaaaatgaaaa 20500769  T
Q  462 tgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||| |||||  |||||||||| |||||||||||||| |||||||||||| || |||||||    
T  20500768 tgaaattgtaatatttgatgaaatttgaaacattgctgaaaatatgttgtgttttagatttttaa 20500704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 116 - 322
Target Start/End: Complemental strand, 9686615 - 9686405
Alignment:
Q  116 gcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc-----aaactaaactgca 210  Q
    ||||||| |||  ||||||| | || ||||| ||| ||||||| ||| |||| ||| | |||| ||||| ||||||||||||     |||| ||||||||    
T  9686615 gcatttgattcggatgtattcgaatcatttttttactcaaccgcatggtttgattcggattgcggttttgattttaccaaccgaaccaaaccaaactgca 9686516  T
Q  211 acataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaa 310  Q
    |  ||||| ||||| |||||| | |||| |||  |||| ||||||||||||||| |||||||||||||| ||||||| | | |||||||||| |||||||    
T  9686515 atgtaagaaaaacactaattaaatatatatcatctagatcaatactcatagaaattcaatgaaaactttaataaaataaaatattttttctc-ttgttaa 9686417  T
Q  311 gtatcttctttg 322  Q
    || |||||||||    
T  9686416 gtttcttctttg 9686405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 891945 - 892066
Alignment:
Q  197 caaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattt 296  Q
    ||||| |||| |||| |||||| |||| ||||||| |  |||||||| || ||||||||| |||||||||||||| |||||||||||||||||||  |||    
T  891945 caaacgaaaccgcaaaataagaaaaactttaattaaatctatgtcacctataccaatacttatagaaactcaatggaaacttttataaaatgacatgttt 892044  T
Q  297 tttctctttgttaagtatcttct 319  Q
    |||||| ||||||||| ||||||    
T  892045 tttctc-ttgttaagtttcttct 892066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 32190324 - 32190408
Alignment:
Q  236 tatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    |||||||| ||||| |||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  32190324 tatgtcacctagactaatattcatagaaactcaatggaaacttttataaaatgacatattttttctc-ttgttaagtttcttcttt 32190408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 108 - 322
Target Start/End: Complemental strand, 22414380 - 22414165
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    ||||||| |||||||||||  ||||||||||||||  || ||| ||||| | ||| ||||||||  ||||  ||||| ||||||| |||| ||| ||||     
T  22414380 aaaaaaccgcatttggttcggatgtatttggataaactttttactcaactgcatggtttggttcgatttgtggttttcattttacgaaccgaaccaaacc 22414281  T
Q  208 gcaacataagataaacattaatt-agacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca-aattttttctcttt 305  Q
    |||| |||||| ||||| ||||  | | |||| |||  |||||||||||||| | ||| |||||| ||||||| ||||||||||| | ||||||||| ||    
T  22414280 gcaatataagaaaaacactaatccaaatatatatcatctagaccaatactcacataaattcaatggaaactttaataaaatgacatatttttttctc-tt 22414182  T
Q  306 gttaagtatcttctttg 322  Q
    ||||||| |||||||||    
T  22414181 gttaagtttcttctttg 22414165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 419 - 526
Target Start/End: Original strand, 24644786 - 24644893
Alignment:
Q  419 tttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcag 518  Q
    ||||| || |||||| || ||||  ||||||||||| ||||||| |||||| ||| | |||||||||||||||||||| ||||| |||||||||||| ||    
T  24644786 tttaaatttggtctacgtagttgagaacattgttggatgaaaataaaattgtaatgttggatgaaatttaaaacattgttgaaaatatgttgtgttttag 24644885  T
Q  519 ctttttaa 526  Q
     |||||||    
T  24644886 ttttttaa 24644893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 16971410 - 16971480
Alignment:
Q  250 caatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    |||||||||||||||| ||||| ||||||| ||||||||||| ||||||||| |||||||||| ||||||||    
T  16971410 caatactcatagaaacacaatggaaactttaataaaatgacatattttttct-tttgttaagtttcttcttt 16971480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 526
Target Start/End: Complemental strand, 6400126 - 6399967
Alignment:
Q  364 taaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatg 463  Q
    |||||| ||||||||||| |||||||||  |||| ||||||||||||||    | |||||||||| |||| || |||| || ||||||| | |||||||     
T  6400126 taaaattttagtcttttgtatttcttacaaaataagattactttttgtccacgt-tttaatttgg-tctacgtagttggaa-cattgttagatgaaaatt 6400030  T
Q  464 aaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    || ||| ||| | ||||||||||||||||||| || ||| |||||||||||| || |||||||    
T  6400029 aagttgtaatgttggatgaaatttaaaacattactaaaaatatgttgtgttttagatttttaa 6399967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 444 - 526
Target Start/End: Original strand, 7169939 - 7170021
Alignment:
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||| || |||| |||||| ||| | |||||||||||||||||||||| ||| |||||||||||| | ||||||||    
T  7169939 aacattgttggatggaaataaaattgtaatgttggatgaaatttaaaacattgctaaaaatatgttgtgttttaactttttaa 7170021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 13092471 - 13092354
Alignment:
Q  203 aaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctc 302  Q
    |||| |||| |||||| ||||| |||||| | |||| | || | |||||||||||||||||||||||||||||  || ||||||||||| | ||||||||    
T  13092471 aaaccgcaatataagaaaaacactaattaaatatattttacttggaccaatactcatagaaactcaatgaaaatgttaataaaatgacataatttttctc 13092372  T
Q  303 tttgttaagtatcttcttt 321  Q
     ||||||||| || |||||    
T  13092371 -ttgttaagtttcctcttt 13092354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 428 - 502
Target Start/End: Complemental strand, 22414045 - 22413971
Alignment:
Q  428 ggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaa 502  Q
    ||||||||| ||||  ||||||||||| ||| |||||||||| ||| | ||||||||||||||||||||||||||    
T  22414045 ggtctatgtagttgggaacattgttggatgagaatgaaattgtaatgttggatgaaatttaaaacattgctgaaa 22413971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 445 - 526
Target Start/End: Complemental strand, 11417294 - 11417213
Alignment:
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||| | ||||||| |||| | ||| | |||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  11417294 acattgttcgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaatatgttgtgttttatctttttaa 11417213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 14564940 - 14564813
Alignment:
Q  164 tttggttcagtttgcagtttttatttta-----ccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactca 258  Q
    ||||||| ||||||||||||||||| ||     | |||||||| ||| |||||||||||| ||||| |||||| | ||||||  || ||||||| |||||    
T  14564940 tttggtttagtttgcagtttttattatacgaaccgaaccaaaccaaattgcaacataagaaaaacactaattaaatatatgtatca-agaccaa-actca 14564843  T
Q  259 tagaaactcaatgaaaacttttataaaatg 288  Q
    || |||||||||||||||||||| ||||||    
T  14564842 taaaaactcaatgaaaacttttaaaaaatg 14564813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 4563314 - 4563242
Alignment:
Q  227 aattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttttt 299  Q
    ||||| || |||||||| || ||||||||||||||||||||||| ||||||||||||||| | || |||||||    
T  4563314 aattaaacctatgtcacctacaccaatactcatagaaactcaataaaaacttttataaaacggcatatttttt 4563242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 291
Target Start/End: Complemental strand, 6400341 - 6400213
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaa-cattaattagacatatgtcacatagaccaatactcataga 262  Q
    ||||||||||  |||||||| ||||||||||||  ||| ||||  ||| ||||| |||| || |||||| | |||| |||  |||||||||||||||| |    
T  6400341 tttggttcagcgtgcagtttgtattttaccaacggaaccaaacctcaatataagctaaaacactaattaaatatatatcatctagaccaatactcatata 6400242  T
Q  263 aactcaatgaaaacttttataaaatgaca 291  Q
    || |||||| ||||||| |||||||||||    
T  6400241 aattcaatggaaactttaataaaatgaca 6400213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 8064915 - 8064845
Alignment:
Q  250 caatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    ||||||||||||||||||||||||||||||||| |||||||| || |||||| |||||||||| | |||||||    
T  8064915 caatactcatagaaactcaatgaaaacttttat-aaatgacatatattttct-tttgttaagttttttctttg 8064845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 19134863 - 19134931
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtct 413  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||  ||||  ||||||||||||||    
T  19134863 ttgaacttttagagaataataaaatcttagtcttttacatttcttacataataccattactttttgtct 19134931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 24644607 - 24644663
Alignment:
Q  247 gaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct 303  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||    
T  24644607 gaccaatactcatagaacctcaatgaaaactttaataaaatgacatatttttactct 24644663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 288
Target Start/End: Complemental strand, 6267529 - 6267393
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagacca 251  Q
    ||||||| ||| |||||||  |||||| ||||||||||||  |||||||| |||| ||||||||||| ||||||||| || || || |||||| |  | |    
T  6267529 tcaaccgcatggtttggtttggtttgcggtttttattttaaaaaccaaaccaaaccgcaacataagagaaacattaactaaacttaggtcaca-aaccta 6267431  T
Q  252 atactcatagaaactcaatga-aaacttttataaaatg 288  Q
     |||||||||||| ||||||| ||| ||||||| ||||    
T  6267430 gtactcatagaaattcaatgagaaatttttatagaatg 6267393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 419 - 526
Target Start/End: Complemental strand, 9686297 - 9686194
Alignment:
Q  419 tttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcag 518  Q
    |||||||||| |||| ||||||   ||||||||||| ||||||| |||||| ||| |   |||||||||||||||||| ||||| || ||||||||| ||    
T  9686297 tttaatttgg-tctacgttgttaggaacattgttggatgaaaataaaattgtaatgt---atgaaatttaaaacattgttgaaaataagttgtgttttag 9686202  T
Q  519 ctttttaa 526  Q
    ||||||||    
T  9686201 ctttttaa 9686194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 428
Target Start/End: Complemental strand, 17306687 - 17306602
Alignment:
Q  343 atttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgg 428  Q
    |||||| |||||| |||| ||| ||||||||||||||| ||||||||||  ||||  |||||||||||||  ||| ||||||||||    
T  17306687 atttgaccttttaaagaatgatgaaatcttagtcttttacatttcttacataatagaattactttttgtccatatttttaatttgg 17306602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 13858965 - 13859068
Alignment:
Q  163 atttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcataga 262  Q
    ||||||||| |||| |||||||||||||||||||| ||| |||| |||| |||||| |||   |||||  || |||||||||||  | | ||||||||||    
T  13858965 atttggttcggtttacagtttttattttaccaaccgaaccaaaccgcaagataagaaaaatgctaattcaacctatgtcacataatcaagtactcataga 13859064  T
Q  263 aact 266  Q
    ||||    
T  13859065 aact 13859068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 14564752 - 14564701
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttacc 392  Q
    ||||||||||||||| |||| ||| ||||||||||||||| |||||||||||    
T  14564752 ctatttgaacttttaaagaatgatgaaatcttagtcttttacatttcttacc 14564701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 411
Target Start/End: Original strand, 14940344 - 14940398
Alignment:
Q  357 agaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgt 411  Q
    ||||||||||||||||||| |||| ||||||||||  ||||| ||||||||||||    
T  14940344 agaaagataaaatcttagtgttttacatttcttacataatataattactttttgt 14940398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 15837203 - 15837325
Alignment:
Q  109 aaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactg 208  Q
    ||||||||||||||||||  ||| |||||||| || || ||  | ||||  ||| || ||||  |||||  |||||||||||| ||||| ||| |||| |    
T  15837203 aaaaactgcatttggttcggatgaatttggatcatatttttccttaaccacatggttcggtttggtttgtggtttttattttagcaaccgaaccaaaccg 15837302  T
Q  209 caacataagataaacattaatta 231  Q
    |||||||||| ||||||||||||    
T  15837303 caacataagaaaaacattaatta 15837325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 515
Target Start/End: Original strand, 16971585 - 16971671
Alignment:
Q  429 gtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    ||||| || |||| |||||| ||||| ||||||| |||||| | | | |||| ||||||||||||||| ||||| ||||||||||||    
T  16971585 gtctacgtagttggaaacatcgttgggtgaaaataaaattgtattgttggataaaatttaaaacattgttgaaaatatgttgtgttt 16971671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 30752888 - 30752828
Alignment:
Q  351 ttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgt 411  Q
    |||||||||| |||||||||| |||||||| ||||||||||| ||||  | ||||||||||    
T  30752888 ttttagagaatgataaaatctcagtcttttacatttcttacctaataaaaatactttttgt 30752828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 20501043 - 20500937
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| ||||||||| | |||  ||||||| |||||| || | || || |||||||||||||| |||| ||||||||||||  ||| ||| |    
T  20501043 aaccaaaccaaaccgcaacataaaaaaaatgttaattaaacatatctcgcctacac-aatactcatagaaattcaaagaaaacttttattgaatcacata 20500945  T
Q  294 ttttttct 301  Q
    ||||||||    
T  20500944 ttttttct 20500937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 892102 - 892148
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttac 391  Q
    |||||||||||||||| |||||||||||| ||||||  |||||||||    
T  892102 ttgaacttttagagaatgataaaatcttaatcttttatatttcttac 892148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 17306781 - 17306747
Alignment:
Q  251 aatactcatagaaactcaatgaaaacttttataaa 285  Q
    |||||||||||||||| ||||||||||||||||||    
T  17306781 aatactcatagaaacttaatgaaaacttttataaa 17306747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 28633264 - 28633200
Alignment:
Q  348 aacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    |||||||||| || |||||||||||||||||||  |||| ||||  ||||  |||||||||||||    
T  28633264 aacttttagaaaatgataaaatcttagtcttttatattttttacataatagaattactttttgtc 28633200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 31944980 - 31945056
Alignment:
Q  129 atgtatttggataattttctt-attcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaa 204  Q
    ||||||| |||||||||| || | ||||||| ||||||||||| ||||||  ||||| |||| |||| |||||||||    
T  31944980 atgtattcggataattttttttactcaaccgcatgatttggttaagtttgtggttttgatttcaccatccaaactaa 31945056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 377
Target Start/End: Original strand, 32190438 - 32190474
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtct 377  Q
    ||| |||||||||||||||| ||||||||||||||||    
T  32190438 ctacttgaacttttagagaatgataaaatcttagtct 32190474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 48643355 - 48643160
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    |||||| ||||||||||||| ||||| |||||| ||||||||  ||||||  ||  |||||||  |||||||||||  |||||||||||  ||| ||||     
T  48643355 aaaaaattgcatttggttcagatgtaattggatcattttcttgctcaaccacatagtttggtttggtttgcagtttacattttaccaactgaaccaaacc 48643256  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    ||||||||||| |||  ||||||| |||||| |||| || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  48643255 gcaacataagaaaaatgttaattaaacatatctcacctataccaatactcatagaaactcaatgaaaac-tttataaaatgacatattttttctctt 48643160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 351 - 526
Target Start/End: Complemental strand, 48643105 - 48642931
Alignment:
Q  351 ttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattg 450  Q
    |||||||||| |||||||||||||||||||| |||||||||  ||||||||||| |||||||  | | ||||| |||| |||||||||||| ||||||||    
T  48643105 ttttagagaatgataaaatcttagtcttttgtatttcttacaaaatatgattacgttttgtccatgtttttaacttgg-tctatgttgttggaaacattg 48643007  T
Q  451 ttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |    |||||||||||||| |||||  |||||||||||||||||||||| || |||| ||||||| ||||||||||    
T  48643006 taaaatgaaaatgaaattgtaatatttgatgaaatttaaaacattgctgtaaatatggtgtgtttaagctttttaa 48642931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 111 - 321
Target Start/End: Original strand, 47646277 - 47646486
Alignment:
Q  111 aaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgca 210  Q
    |||| ||||||| ||  ||||||||||||| | ||| ||| |||||| ||| ||||||||| |||||| ||||||||||||| |||| ||| || | |||    
T  47646277 aaaccgcatttgatttgaatgtatttggatcacttttttactcaaccatattatttggttcggtttgcggtttttattttactaaccgaaccaatccgca 47646376  T
Q  211 acataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaa 310  Q
    |||||||| ||||||| |||  |  || ||||| ||||||||||||||||||||||| ||| ||| ||| ||||||||||| |||||||||| |||||||    
T  47646377 acataagaaaaacattgattgaatctaagtcacctagaccaatactcatagaaactcgatggaaattttaataaaatgacatattttttctc-ttgttaa 47646475  T
Q  311 gtatcttcttt 321  Q
    || ||||||||    
T  47646476 gtttcttcttt 47646486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 194 - 321
Target Start/End: Complemental strand, 27456811 - 27456685
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| ||||||||||| ||||| |||||| |  |||||| | |||||||||||||||||||||||||||||||||||| |||||||||| |    
T  27456811 aaccaaaccaaaccgcaacataagaaaaacactaattaaatctatgtctcctagaccaatactcatagaaactcaatgaaaacttttgtaaaatgacata 27456712  T
Q  294 ttttttctctttgttaagtatcttcttt 321  Q
    ||||||||| ||||||||| ||||||||    
T  27456711 ttttttctc-ttgttaagtttcttcttt 27456685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 108 - 321
Target Start/End: Original strand, 29211131 - 29211340
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    ||||||| ||||||||||   || |||| |||| | ||| ||| ||||||| ||| |||||||  ||||||||||||  ||||||||||||||| || |     
T  29211131 aaaaaaccgcatttggtttggatatattcggatcacttttttactcaaccgcatggtttggtttggtttgcagttttacttttaccaaccaaaccaatc- 29211229  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgt 307  Q
    || |||||||  ||||| |||||| |  |||||||| |||||||||| |||||||||||||||||||||||||||||||||  | ||| |||||| ||||    
T  29211230 gcgacataaggaaaacactaattaaatctatgtcacctagaccaatattcatagaaactcaatgaaaacttttataaaatg--atattgtttctc-ttgt 29211326  T
Q  308 taagtatcttcttt 321  Q
    ||||| ||||||||    
T  29211327 taagtttcttcttt 29211340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 108 - 291
Target Start/End: Original strand, 26208798 - 26208984
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaa-- 205  Q
    ||||||| ||||||||||  |||||||| |||||| |||  || ||||||| ||| ||||||||||||||  | ||||||||||||||||||||||||      
T  26208798 aaaaaaccgcatttggtttgaatgtattcggataaattt--tactcaaccgcatggtttggttcagtttgtggattttattttaccaaccaaactaaacc 26208895  T
Q  206 ---ctgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
       | ||||| ||||| ||||| || ||| | ||||||||  || ||||||||||||||||| |||| |||||||||||||||||||||    
T  26208896 aagccgcaacgtaagaaaaacactagttaaatatatgtcatctaaaccaatactcatagaaaatcaacgaaaacttttataaaatgaca 26208984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 180 - 321
Target Start/End: Complemental strand, 43202912 - 43202772
Alignment:
Q  180 gtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttt 279  Q
    |||||||||||||||||||||| ||||  |||||||| | ||||| |||||| |  |||||||  ||||||||||||| || ||||||||||||||||||    
T  43202912 gtttttattttaccaaccaaaccaaaccacaacataatacaaacactaattaaatctatgtcatctagaccaatactcgtataaactcaatgaaaacttt 43202813  T
Q  280 tataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    |||| ||| ||| |||||||||| ||||||||| ||||||||    
T  43202812 tatataataacatattttttctc-ttgttaagtttcttcttt 43202772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 6879696 - 6879822
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| ||||| |||| ||||| ||| | |||||| |||||| |||| ||||| ||||||||||||| ||||||||||||||| ||||||||||| |    
T  6879696 aaccaaaccaaactacaacttaagaaaaatactaattaaacatatatcacctagactaatactcatagaagctcaatgaaaactttaataaaatgacata 6879795  T
Q  294 ttttttctctttgttaagtatcttcttt 321  Q
    ||||||||| ||||||||| ||||||||    
T  6879796 ttttttctc-ttgttaagtttcttcttt 6879822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 347 - 526
Target Start/End: Complemental strand, 30855417 - 30855239
Alignment:
Q  347 gaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaac 446  Q
    |||||||||||||| |||||||||||| | |||||||||||| ||  |||||||||| |||||||||  || |||||||| |||||||||||||| ||||    
T  30855417 gaacttttagagaatgataaaatcttaatgttttgcatttctcacaaaatatgattattttttgtctgcatttttaattt-ggtctatgttgttggaaac 30855319  T
Q  447 attgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||    | ||| | |||||  ||| |  ||| ||||||||||||||||||||| ||||||||||| ||| |||||||    
T  30855318 attgtaaaataaaatttaaattctaatgtttgatcaaatttaaaacattgctgaaaatatgttgtgttccagttttttaa 30855239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 345 - 515
Target Start/End: Complemental strand, 37375651 - 37375482
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||| |||||||||| || |||||||||||||||||||||||| ||  ||||  ||||  |||||||  | | ||||| || |||||||||||||| ||    
T  37375651 ttgaaattttagagaatgagaaaatcttagtcttttgcatttctaacaaaatagaattatattttgtccatgtttttaactt-ggtctatgttgttggaa 37375553  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||    |||||||||||||| |||||  ||||||||||||||||||| ||||| ||||||||||||    
T  37375552 acattgtaaaatgaaaatgaaattgtaatatttgatgaaatttaaaacattgttgaaaatatgttgtgttt 37375482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 108 - 303
Target Start/End: Complemental strand, 30855672 - 30855470
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    ||||||||||| |||||||  ||||| |   || ||||||||||||||||  ||| |||||||  |||||| ||||| |||||||||||||||| |||||    
T  30855672 aaaaaactgcacttggttcggatgtaatcaaatcattttcttattcaaccacatggtttggtttggtttgcggttttcattttaccaaccaaaccaaact 30855573  T
Q  208 -------gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttc 300  Q
           | ||||||||| ||| ||| |||| ||||||||||| || ||||||||||||| |||||| | |||||  |||||||||||||| ||||||||    
T  30855572 aaagcgcgtaacataagaaaaatattgattaaacatatgtcacctacaccaatactcataaaaactctacgaaaatatttataaaatgacatattttttc 30855473  T
Q  301 tct 303  Q
    |||    
T  30855472 tct 30855470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 116 - 322
Target Start/End: Complemental strand, 1813046 - 1812836
Alignment:
Q  116 gcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaact-----aaactgca 210  Q
    |||||||||||  || |||| |||| ||| | ||| ||||||| ||  ||||||||||||||| ||||| ||||||||||||||||      |||| |||    
T  1813046 gcatttggttcggatatattcggatcattattttactcaaccgcatagtttggttcagtttgcggttttgattttaccaaccaaacggaaccaaaccgca 1812947  T
Q  211 acataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaa 310  Q
    | |||| | ||||| |||||| | |||| | |  |||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||| ||||| |    
T  1812946 atataaaaaaaacactaattaaatatatattatctagaccaatactcatagaaattcaatgaaaattttaataaaatgacatattttttctc-ttgttga 1812848  T
Q  311 gtatcttctttg 322  Q
    || |||||||||    
T  1812847 gtttcttctttg 1812836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 115 - 526
Target Start/End: Original strand, 11833982 - 11834403
Alignment:
Q  115 tgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaa-ccaaactaaactgcaaca 213  Q
    ||||||||||||  |||||||   || || || ||| ||||| | |||||||||||| |||||  ||||| |||||||||| |||||| |||| |||| |    
T  11833982 tgcatttggttcggatgtattcatatcatgtttttactcaactgcatgatttggttcggtttgtggttttgattttaccaaaccaaaccaaaccgcaata 11834081  T
Q  214 taagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca-aattttttctctttgttaagt 312  Q
    ||||| ||| |||||||| | |||| |||  | |||||||||||||||||| |||||| ||||||| |||| ||||||   ||||||||| ||| |||||    
T  11834082 taagaaaaatattaattaaatatatatcatcttgaccaatactcatagaaattcaatggaaactttaataatatgacatctttttttctc-ttgctaagt 11834180  T
Q  313 atcttctttg-nnnnnnnctca---------ttaaattctatttgaacttttagagaaaga-taaaatcttagtcttttgcatttcttaccgaatatgat 401  Q
     |||||||||         |||         |||  | ||| ||||||| ||| |||| || |||||| ||||||||||| |||||||||  ||||||||    
T  11834181 ttcttctttgttttttctatcaaaaatatatttatgtgctacttgaactcttaaagaatgattaaaattttagtcttttgtatttcttacaaaatatgat 11834280  T
Q  402 tactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaa 501  Q
    |||||||||||   || |||||||| |||||| ||  |||  ||||||||||| ||||||| ||| || ||| | |||| ||||||||||||||| ||||    
T  11834281 tactttttgtccagat-tttaattt-ggtctacgtaattgggaacattgttggatgaaaataaaactgtaatgttggataaaatttaaaacattgttgaa 11834378  T
Q  502 attatgttgtgtttcagctttttaa 526  Q
    | |||||||||||| ||||||||||    
T  11834379 aatatgttgtgttttagctttttaa 11834403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 236 - 440
Target Start/End: Complemental strand, 2734767 - 2734567
Alignment:
Q  236 tatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct-ttgttaagtatcttctttgnnnnnnnctcat 334  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||| |||| ||          |  |    
T  2734767 tatgtcatctagaccaatactcatagaaactcaatgaatacttttataaaatgacatatttttt-tctcttgttaagtttctttttaaaaaatatat--t 2734671  T
Q  335 taaattctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctat 434  Q
    ||  | ||| |||||||||||||||| ||||||||||||||||||| ||||||||||  |||| ||||||||||| ||  ||| |||||||| |||||||    
T  2734670 tacgtgctaattgaacttttagagaatgataaaatcttagtcttttacatttcttacataataagattactttttatccatat-tttaattt-ggtctat 2734573  T
Q  435 gttgtt 440  Q
    ||||||    
T  2734572 gttgtt 2734567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 363 - 526
Target Start/End: Original strand, 8118057 - 8118220
Alignment:
Q  363 ataaaatcttagtcttttgcatttcttaccgaatatgattacttttt-gtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaa 461  Q
    ||||||||||| ||||||| |||||||||  |||||||||||||||| ||   | | ||||| |||| |||||||||||| ||||||| |    ||||||    
T  8118057 ataaaatcttaatcttttgtatttcttacaaaatatgattacttttttgttcatgtttttaacttgg-tctatgttgttggaaacattataaaatgaaaa 8118155  T
Q  462 tgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    | |||||| |||    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8118156 ttaaattgtaatgcttgatgaaatttaaaacattgctgaaaatatgttgtgtttcagctttttaa 8118220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 345 - 522
Target Start/End: Complemental strand, 22298855 - 22298679
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||||| || || || ||| |||| ||||||||||| |||||||| | |||| |||||||||||||  | |  ||| | || ||||||||| ||||  |    
T  22298855 ttgaactcttcgataatgattaaattttagtcttttgtatttcttatcaaataggattactttttgt--tcacgttttaatttggtctatgtagttggga 22298758  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgc-tgaaattatgttgtgtttcagcttt 522  Q
    |||||||||| ||||||| |||||| ||| | ||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  22298757 acattgttggatgaaaataaaattgtaatgttggatgaaatttaaaacattgcttgaaaatatgttgtgttttagcttt 22298679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 23033170 - 23033038
Alignment:
Q  187 ttttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaa 286  Q
    |||||| |||||||| |||| ||||||||||| |||| ||||||| ||||||| ||| |||| |||||||||||||||||||| | ||||| ||| ||||    
T  23033170 ttttacgaaccaaaccaaaccgcaacataagaaaaactttaattaaacatatgacac-tagatcaatactcatagaaactcaacggaaactcttacaaaa 23033072  T
Q  287 tgacaaattttttctctttgttaagtatcttcttt 321  Q
    ||| | |||||||||| ||||||||| | ||||||    
T  23033071 tgaaatattttttctc-ttgttaagttttttcttt 23033038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 322
Target Start/End: Original strand, 524467 - 524594
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| ||||||||| | |||   |||||| |  |||||||| ||||||| ||||||||||||||||||| ||||||||||||||| ||| |    
T  524467 aaccaaaccaaaccgcaacataaaaaaaattctaattaaatctatgtcacctagaccagtactcatagaaactcaatggaaacttttataaaataacata 524566  T
Q  294 ttttttctctttgttaagtatcttctttg 322  Q
    ||||||||  ||||||||| |||||||||    
T  524567 ttttttct-attgttaagtttcttctttg 524594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 322
Target Start/End: Original strand, 23410785 - 23410944
Alignment:
Q  162 gatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatag 261  Q
    |||||||||  |||| | |||||||||||||||||| |||||||| ||||||||||| ||| |||| ||| |  ||| |||   |  | |||||||||||    
T  23410785 gatttggttaggtttacggtttttattttaccaaccgaactaaaccgcaacataagagaaatattagttaaatttatctcatccaacctaatactcatag 23410884  T
Q  262 aaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    ||||||||| | ||||| |||||||||| | |||||||||| ||||||||| |||||||||    
T  23410885 aaactcaataagaacttctataaaatgaaatattttttctc-ttgttaagtttcttctttg 23410944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 7697727 - 7697649
Alignment:
Q  242 acatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||  ||||||||| ||||||||    
T  7697727 acatagaccaatactcatagaaactcaatgaaaactttaataaaaagacatattttttct-attgttaagtttcttcttt 7697649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 16535386 - 16535457
Alignment:
Q  233 acatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    ||||||||||| |||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||    
T  16535386 acatatgtcacctagaccaatacttatagaaactcaatggaaacttttttaaaatgacatattttttctctt 16535457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 16630276 - 16630205
Alignment:
Q  233 acatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    ||||||||||| |||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||    
T  16630276 acatatgtcacctagaccaatacttatagaaactcaatggaaacttttttaaaatgacatattttttctctt 16630205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 304
Target Start/End: Complemental strand, 20335123 - 20334966
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaa-----ctgcaacataagataaacattaattagacatatgtcacata 246  Q
    ||||||||||| |||||||| ||||||  |||| | ||||| |||||||| |||     |  ||| |||||| ||||| |||||| |  ||| |||| ||    
T  20335123 tcaaccgtatggtttggttcggtttgccattttgactttacgaaccaaaccaaatcaaaccacaatataagaaaaacactaattaaatgtatatcaccta 20335024  T
Q  247 gaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||    
T  20335023 gaccaatactcatagaaattcaatgaaaactttaataaattgacatattttttctctt 20334966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 27100114 - 27100328
Alignment:
Q  111 aaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact--- 207  Q
    |||| ||||||| ||||||||||||  ||| | ||| ||| ||||||||||| |||||||  |||||| ||||| |||||||||||||||| ||||        
T  27100114 aaaccgcatttgattcaaatgtattcagatcacttttttactcaaccgtatggtttggtttggtttgcggttttgattttaccaaccaaaccaaaccaaa 27100213  T
Q  208 --gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
      |||| |||||| ||||| |  ||| | |||| |||| || ||||||||| ||| ||| |||||||||||||| ||||||||||   |||||| |  ||    
T  27100214 ccgcaatataagaaaaacactctttaaatatatatcacttataccaatacttatataaattcaatgaaaactttaataaaatgac--ttttttttttctt 27100311  T
Q  306 gttaagtatcttctttg 322  Q
    ||||||| |||||||||    
T  27100312 gttaagtttcttctttg 27100328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 322
Target Start/End: Complemental strand, 27178189 - 27177975
Alignment:
Q  111 aaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact--- 207  Q
    |||| ||||||| ||||||||||||  ||| | ||| ||| ||||||||||| |||||||  |||||| ||||| |||||||||||||||| ||||        
T  27178189 aaaccgcatttgattcaaatgtattcagatcacttttttactcaaccgtatggtttggtttggtttgcggttttgattttaccaaccaaaccaaaccaaa 27178090  T
Q  208 --gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
      |||| |||||| ||||| |  ||| | |||| |||| || ||||||||| ||| ||| |||||||||||||| ||||||||||   |||||| |  ||    
T  27178089 ccgcaatataagaaaaacactctttaaatatatatcacttataccaatacttatataaattcaatgaaaactttaataaaatgac--ttttttttttctt 27177992  T
Q  306 gttaagtatcttctttg 322  Q
    ||||||| |||||||||    
T  27177991 gttaagtttcttctttg 27177975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 35495891 - 35495763
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca-a 292  Q
    |||||||| |||| |||| |||||| ||||| |||||| ||||||||||| |||| |||||||  ||||| ||||||| ||||||||||||||  ||| |    
T  35495891 aaccaaaccaaaccgcaatataagaaaaacactaattaaacatatgtcacctagatcaatacttttagaatctcaatggaaacttttataaaacaacata 35495792  T
Q  293 attttttctctttgttaagtatcttctttg 322  Q
     ||||||||| ||||||||| |||||||||    
T  35495791 tttttttctc-ttgttaagtttcttctttg 35495763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 40849342 - 40849213
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| |||||||||||  |||  |||||| |  |||||||   |||||||||||||||||||||||||| |||||||||||||| |||| |    
T  40849342 aaccaaaccaaaccgcaacataagaacaactctaattaaatctatgtcatcgagaccaatactcatagaaactcaatggaaacttttataaaacgacata 40849243  T
Q  294 ttttttctct-ttgttaagtatcttctttg 322  Q
    |||||| ||| ||||||||| |||| ||||    
T  40849242 ttttttttctgttgttaagtttcttttttg 40849213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 198 - 305
Target Start/End: Original strand, 38879489 - 38879596
Alignment:
Q  198 aaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttt 297  Q
    |||| |||||| ||||||||| ||||| |||||| | ||||||||   ||||||| ||||||||||||| |  | ||||||||||||||||||| |||||    
T  38879489 aaaccaaactgtaacataagaaaaacactaattaaaaatatgtcatccagaccaacactcatagaaacttaccggaaacttttataaaatgacatatttt 38879588  T
Q  298 ttctcttt 305  Q
    ||||||||    
T  38879589 ttctcttt 38879596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 502
Target Start/End: Original strand, 16535507 - 16535663
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    |||||||||||| ||||| |||||||||||||||||| ||||| |||  ||||||||||| |||| | ||    ||||| || |||||| || |||| ||    
T  16535507 ttgaacttttagtgaaagttaaaatcttagtcttttgtatttcatacaaaatatgattacatttt-ttttacgttttaaatttggtctacgtagttggaa 16535605  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaa 502  Q
    |  || ||  ||||||||||||||| ||| | |||||||||||||||||||| |||||    
T  16535606 atttttttaattgaaaatgaaattgtaattttggatgaaatttaaaacattgttgaaa 16535663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 502
Target Start/End: Complemental strand, 16630155 - 16629999
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    |||||||||||| ||||| |||||||||||||||||| ||||| |||  ||||||||||| |||| | ||    ||||| || |||||| || |||| ||    
T  16630155 ttgaacttttagtgaaagttaaaatcttagtcttttgtatttcatacaaaatatgattacatttt-ttttacgttttaaatttggtctacgtagttggaa 16630057  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaa 502  Q
    |  || ||  ||||||||||||||| ||| | |||||||||||||||||||| |||||    
T  16630056 atttttttaattgaaaatgaaattgtaattttggatgaaatttaaaacattgttgaaa 16629999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 321
Target Start/End: Complemental strand, 25007763 - 25007618
Alignment:
Q  174 tttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaa 273  Q
    ||||| |||||  ||||||| ||||||| ||||||||| |||||| |||||||||||  | |||| |||  ||| |||||||||||||||| | ||||||    
T  25007763 tttgcggttttggttttacctaccaaaccaaactgcaatataagaaaaacattaatt--aaatatatcatctaggccaatactcatagaaattaaatgaa 25007666  T
Q  274 aacttttataaaatgaca-aattttttctctttgttaagtatcttcttt 321  Q
    || ||| |||||||||||   ||||||||| ||||||||| ||||||||    
T  25007665 aattttaataaaatgacatttttttttctc-ttgttaagtttcttcttt 25007618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 46147693 - 46147567
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| ||||||||||| ||||| |||||| |  ||||| |||||||| |||||||||| |||||| ||| |||||||||| |||||||| |    
T  46147693 aaccaaaccaaaccgcaacataagaaaaacactaattaaatctatgttacatagacaaatactcataaaaactcgatggaaacttttat-aaatgacata 46147595  T
Q  294 ttttttctctttgttaagtatcttctttg 322  Q
     ||||| |  ||||||||| |||||||||    
T  46147594 cttttt-tgcttgttaagtttcttctttg 46147567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 341 - 412
Target Start/End: Complemental strand, 23675705 - 23675634
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||| ||||  |||| ||||||||||||||    
T  23675705 ctatttgaacttttagagaatgataaaatcttaatcttttacatttattacataataggattactttttgtc 23675634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 118 - 287
Target Start/End: Original strand, 31011278 - 31011457
Alignment:
Q  118 atttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact-----gcaac 212  Q
    |||||||||  |||||||  |||  |||||||| |||||||  || |||||| | |||||  |||||||||||||||||||||| ||||      |||||    
T  31011278 atttggttcggatgtattcagatcgttttcttactcaaccgcgtggtttggtgcggtttgaggtttttattttaccaaccaaacgaaaccaaaccgcaac 31011377  T
Q  213 ataagataaacattaattagacatatgtcacatagaccaatactcatag-----aaactcaatgaaaacttttataaaat 287  Q
    |||||| ||||| |||||| |||||||||   |||||||||| ||||||     |||||||||| |||||||||||||||    
T  31011378 ataagaaaaacactaattaaacatatgtcgtctagaccaatattcatagaaactaaactcaatggaaacttttataaaat 31011457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 526
Target Start/End: Original strand, 10338586 - 10338746
Alignment:
Q  364 taaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatg 463  Q
    |||||| ||||||||||| || ||||||  |||||||||||||||||||    | |||||||| | |||| || ||||  ||||||||||| || ||||     
T  10338586 taaaattttagtcttttgtatctcttacaaaatatgattactttttgtccacgt-tttaattttg-tctaagtagttgggaacattgttggatggaaata 10338683  T
Q  464 aaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||  ||||| |||||||||| ||||||||| || || |||||||||||  ||||||||||    
T  10338684 aaattctaatattggatgaaattgaaaacattgttggaaatatgttgtgttatagctttttaa 10338746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 236 - 318
Target Start/End: Complemental strand, 11399563 - 11399482
Alignment:
Q  236 tatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttc 318  Q
    |||||||| |||||||||| || |||||| |||||| ||||||||||||||||||| ||||| |||| ||||||||| |||||    
T  11399563 tatgtcacctagaccaataatcttagaaattcaatggaaacttttataaaatgacatattttgtctc-ttgttaagtttcttc 11399482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 456 - 526
Target Start/End: Original strand, 30079453 - 30079523
Alignment:
Q  456 tgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||||||||| |||||  ||| ||||||||||||||||||||| ||| |||||||| ||||||||||    
T  30079453 tgaaaatgaaattgtaatatttgataaaatttaaaacattgctgaaaatatattgtgttttagctttttaa 30079523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 469
Target Start/End: Complemental strand, 32237984 - 32237867
Alignment:
Q  351 ttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattg 450  Q
    |||||||||| ||||||| |||| ||||||||| || ||||  ||||||||||| |||||||    | |||||||| |||||||||| ||  ||||||||    
T  32237984 ttttagagaatgataaaagcttaatcttttgcaatttttacataatatgattacattttgtccacgtttttaattt-ggtctatgttattagaaacattg 32237886  T
Q  451 ttggttgaaaatgaaattg 469  Q
    |||| ||||||||||||||    
T  32237885 ttggatgaaaatgaaattg 32237867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 526
Target Start/End: Original strand, 6879856 - 6880035
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||||  ||||  |||| ||||||      | |||||||||| | ||| ||||||  |    
T  6879856 ttgaatttttagagaatgataaaatcttagtcttt-gcatttcttacaaaataaaattattttttgcacacgtttttaatttggtt-tattttgttggga 6879953  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    | |||||| | |||||||  ||||  ||| | |||||||||||||||||||| ||||| |||||||||||| | ||||||||    
T  6879954 atattgttagatgaaaatttaattttaatgttggatgaaatttaaaacattgttgaaaatatgttgtgttttaactttttaa 6880035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 36550945 - 36550821
Alignment:
Q  197 caaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattt 296  Q
    |||| |||| || ||||||||| |||| ||||||  || |||||| | |||| ||||| |||||||| ||||||  ||| ||||||||||||||| ||||    
T  36550945 caaattaaattgtaacataagaaaaacgttaattgaacttatgtcgcttagatcaatattcatagaagctcaattgaaatttttataaaatgacatattt 36550846  T
Q  297 tttctctttgttaagtatcttctttg 322  Q
    |||||| ||||||||  |||||||||    
T  36550845 tttctc-ttgttaagcttcttctttg 36550821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 289
Target Start/End: Original strand, 8117881 - 8117976
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatga 289  Q
    |||||||  |||| ||||||||||| |||| ||||||| | || | |||| || ||||||||||||| |||||||||| ||||| |||||||||||    
T  8117881 aaccaaatcaaaccgcaacataagaaaaacgttaattaaaaatgtatcacctaaaccaatactcatataaactcaatggaaactcttataaaatga 8117976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 8568148 - 8568267
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca-a 292  Q
    |||||||| |||| |||| |||||| ||||| |||||| | |||| |||   |||||||| |||||||||| |||||| ||||||| ||||||||||| |    
T  8568148 aaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcatcaagaccaatgctcatagaaattcaatggaaactttaataaaatgacata 8568247  T
Q  293 attttttctctttgttaagt 312  Q
    ||||||| |  |||||||||    
T  8568248 atttttttttcttgttaagt 8568267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 515
Target Start/End: Complemental strand, 20334809 - 20334738
Alignment:
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    ||||||||||| | ||||| |||||| ||| | |||| ||||||||||||||||||||||||||||| ||||    
T  20334809 aacattgttggataaaaataaaattgtaatgttggatcaaatttaaaacattgctgaaattatgttgggttt 20334738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 285
Target Start/End: Complemental strand, 29628697 - 29628606
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaa 285  Q
    |||||||| |||| ||||||||||| ||||| |||||| |  |||||||| || || || ||| |||||||||||||| |||||||||||||    
T  29628697 aaccaaaccaaaccgcaacataagaaaaacactaattaaagctatgtcacctacacaaacactgatagaaactcaatggaaacttttataaa 29628606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 33435403 - 33435339
Alignment:
Q  256 tcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    ||||||||||||||||  ||||||||||||||||||  ||||||||| ||||||||| ||||||||    
T  33435403 tcatagaaactcaatgtgaacttttataaaatgacatgttttttctc-ttgttaagtttcttcttt 33435339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 412
Target Start/End: Complemental strand, 49012379 - 49012306
Alignment:
Q  339 ttctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||||||||||||||  |||| |||||||||||  |||||||||||||||||  ||||  |||||||||||||    
T  49012379 ttctatttgaacttttcaagaatgataaaatcttgttcttttgcatttcttacaaaatagaattactttttgtc 49012306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 22298958 - 22298888
Alignment:
Q  250 caatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    ||||||||||||||| |||||||||||||| | |||||||| ||||||||||| ||||||||| |||| ||||    
T  22298958 caatactcatagaaattcaatgaaaactttaacaaaatgac-aattttttctc-ttgttaagtttcttttttg 22298888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 321
Target Start/End: Complemental strand, 26956413 - 26956200
Alignment:
Q  106 gtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaa 205  Q
    ||||||||| | |||||||| | ||||||| | || | ||| ||| |||||||  || ||||| || |||||  |||||||||||||||||| ||  |||    
T  26956413 gtaaaaaaccgtatttggtttagatgtattcgaatcacttttttactcaaccgcgtggtttggatcggtttgt-gtttttattttaccaaccgaatcaaa 26956315  T
Q  206 ctgcaacataagataaa-cattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |  ||| |||||| ||| || |||||| | ||||||||  ||  ||||||||| |||||||| |||| |||||||||| |||||||| || |||| | ||    
T  26956314 ccacaatataagaaaaaacactaattaaatatatgtcagctacgccaatactcgtagaaacttaatgtaaacttttat-aaatgacatatatttt-tttt 26956217  T
Q  305 tgttaagtatcttcttt 321  Q
    |||||||| ||||||||    
T  26956216 tgttaagtttcttcttt 26956200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 305
Target Start/End: Original strand, 1032556 - 1032651
Alignment:
Q  210 aacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
    ||||||||| ||| |||| ||| || ||||||||  |  || |||||||||||||||||||||||||||||||  |||||||  |||||| |||||    
T  1032556 aacataagagaaatattatttaaacttatgtcacccaacccgatactcatagaaactcaatgaaaacttttatggaatgacatgttttttttcttt 1032651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 22701099 - 22701161
Alignment:
Q  348 aacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgt 411  Q
    |||||||||||||  ||||||||||| ||||||||||||||||   ||||||||||||||||||    
T  22701099 aacttttagagaataataaaatcttattcttttgcatttctta-aaaatatgattactttttgt 22701161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 411
Target Start/End: Complemental strand, 23729676 - 23729629
Alignment:
Q  364 taaaatcttagtcttttgcatttcttaccgaatatgattactttttgt 411  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||    
T  23729676 taaaatcttagtcttttgtatttcttacaaaatatgattactttttgt 23729629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 46147534 - 46147467
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||  ||||  |||||||||||||    
T  46147534 ttgaacttttagacaataataaaatcttagtcttttacatttcttacataatagaattactttttgtc 46147467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 515
Target Start/End: Original strand, 35819930 - 35820000
Alignment:
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||| | ||||||| |||| | ||| | |||||||||||||||||||||||||| ||| ||||||||    
T  35819930 acattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaatatattgtgttt 35820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 21237428 - 21237492
Alignment:
Q  252 atactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatctt 317  Q
    ||||||||||||| |||||| ||||||||||||||||||| || ||| || |||||||||| ||||    
T  21237428 atactcatagaaattcaatggaaacttttataaaatgacatatatttcct-tttgttaagtttctt 21237492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 10337996 - 10338135
Alignment:
Q  70 agaaaaactgtaaactgaactaa-cctaactaaagctgtaaaaaactgcatttggttcaaatgtatttggataattttcttat--tcaaccgtatgattt 166  Q
    |||||||||| |||| ||||||| || ||| ||| ||| |||||||  ||||||||||  ||||||| |||| ||||| || |  ||||||| ||| |||    
T  10337996 agaaaaactgcaaaccgaactaatccaaaccaaaactgcaaaaaacaacatttggttcggatgtattcggatcatttttttttgctcaaccgcatggttt 10338095  T
Q  167 ggttcagtttgcagtttttattttaccaaccaaactaaac 206  Q
    |||||  ||||  ||||| |||||||||||| ||||||||    
T  10338096 ggttcgatttgtggttttgattttaccaaccgaactaaac 10338135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 502
Target Start/End: Complemental strand, 23729587 - 23729543
Alignment:
Q  458 aaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaa 502  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||    
T  23729587 aaaatgaaattgtaatattggatgaaatttaaaacattgttgaaa 23729543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 26524694 - 26524762
Alignment:
Q  344 tttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||| |||||| |||| ||| |||||||| |||||| ||||||||||  ||||| |||||||||||||    
T  26524694 tttgatcttttaaagaacgatgaaatcttaatcttttacatttcttacataatataattactttttgtc 26524762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 30079341 - 30079381
Alignment:
Q  351 ttttagagaaagataaaatcttagtcttttgcatttcttac 391  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  30079341 ttttagagaaagataaaatcttagccttttccatttcttac 30079381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 34751215 - 34751155
Alignment:
Q  447 attgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatg 507  Q
    |||||||| ||||||| |||||| ||| | | |||||||||||||||||||||||| ||||    
T  34751215 attgttggatgaaaataaaattgtaatgttgtatgaaatttaaaacattgctgaaaatatg 34751155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 7685704 - 7685799
Alignment:
Q  142 attttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacata 237  Q
    ||||||||| |||| | |||| |||| |||  ||| ||| |||||||||| ||||| |||| | | ||||||||||| |||||||||||| |||||    
T  7685704 attttcttactcaatcctatggtttgattcgatttacaggttttattttatcaaccgaactgacccgcaacataagaaaaacattaattaaacata 7685799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 17493148 - 17493214
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    |||||||||||||||| |||||||||| |  ||||| ||||||||||||  || ||||||||||||||    
T  17493148 ttgaacttttagagaatgataaaatctca-acttttacatttcttaccgtctaggattactttttgtc 17493214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 17560066 - 17560000
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    |||||||||||||||| |||||||||| |  ||||| ||||||||||||  || ||||||||||||||    
T  17560066 ttgaacttttagagaatgataaaatctca-acttttacatttcttaccgtctaggattactttttgtc 17560000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 23675838 - 23675771
Alignment:
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaa 275  Q
    |||| |||||| ||||| |||||| |  |||||||| || || |||||||||||||||||||||||||    
T  23675838 gcaatataagaaaaacactaattaaatttatgtcacctaaactaatactcatagaaactcaatgaaaa 23675771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 498
Target Start/End: Original strand, 23706888 - 23707038
Alignment:
Q  348 aacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattacttttt-gtctttatctttaatttgggtctatgttgttgtaaac 446  Q
    ||||||||||||| ||||||||| || | |||||||||||||| |||| |   ||| ||||| ||||   | ||| |||||  ||||| ||| || ||||    
T  23706888 aacttttagagaatgataaaatcataattttttgcatttcttatcgaagagagttaattttttgtctacgttttttatttga-tctatattgatgaaaac 23706986  T
Q  447 attgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgct 498  Q
    |||| ||| ||||||| |||||| ||||| ||||||||||| |||| |||||    
T  23706987 attgatggatgaaaattaaattgtaatattggatgaaatttgaaacgttgct 23707038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 27214848 - 27214917
Alignment:
Q  251 aatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||||||||||| |||||| |||||||||| |||||||| || || ||| |||||||||| |||||||||    
T  27214848 aatactcatagaaattcaatggaaacttttat-aaatgacatatattatct-tttgttaagtttcttctttg 27214917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 526
Target Start/End: Original strand, 31287625 - 31287704
Alignment:
Q  447 attgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||| |||||||  ||||| ||| | |||| ||||||||||| ||||||||| ||||||||| || | ||||||||    
T  31287625 attgttggatgaaaatacaattgtaatgttggataaaatttaaaacgttgctgaaaatatgttgtggtttaactttttaa 31287704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 38903309 - 38903223
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgt--cacatagaccaatactcatagaaactcaatgaaaactt 278  Q
    |||||||  |||| ||||||||||| ||||| |||||| |||||| |  ||| ||||  ||||||| ||||||||||||||||||||    
T  38903309 aaccaaatcaaaccgcaacataagaaaaacaataattaaacatatatgccacctagataaatactcgtagaaactcaatgaaaactt 38903223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 49012682 - 49012611
Alignment:
Q  220 aaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||||||||||| | ||||||||||||||  | ||| || ||||||||||||||   |||||||||||||||    
T  49012682 aaacattaattaaatatatgtcacatagattattacacaaagaaactcaatgaatttttttataaaatgaca 49012611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 515
Target Start/End: Complemental strand, 7697481 - 7697443
Alignment:
Q  477 ggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  7697481 ggatgaaatttataacattgctgaaaatatgttgtgttt 7697443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 497
Target Start/End: Complemental strand, 16359411 - 16359334
Alignment:
Q  419 tttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgc 497  Q
    |||||||||| ||||||||| ||  || |||||||| |||||||||||||  ||| | |||| ||||||||||||||||    
T  16359411 tttaatttgg-tctatgttgatgggaatattgttggatgaaaatgaaattataatgttggataaaatttaaaacattgc 16359334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 291
Target Start/End: Original strand, 22700943 - 22701036
Alignment:
Q  197 caaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    ||||| |||||||||||||| | ||||| |||||| | |||||| ||||| | |||||||| |||||| | ||| |||||| |||||||| ||||    
T  22700943 caaaccaaactgcaacataa-aaaaacaataattaaatatatgttacataaatcaatactcgtagaaaataaataaaaactgttataaaaggaca 22701036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 266
Target Start/End: Complemental strand, 47484286 - 47484185
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaa 263  Q
    ||||||||  ||||| |||||||||||||||||  ||  |||| |||| |||||| |||   |||||| || ||||||||||| ||||||||||||| ||    
T  47484286 tttggttctttttgcggtttttattttaccaactgaatcaaaccgcaatataaga-aaatgctaattaaacctatgtcacataaaccaatactcatataa 47484188  T
Q  264 act 266  Q
    |||    
T  47484187 act 47484185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 412
Target Start/End: Original strand, 21237546 - 21237599
Alignment:
Q  359 aaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    |||||| ||||||||||||||| ||||||||||  || || |||||||||||||    
T  21237546 aaagatgaaatcttagtcttttacatttcttacataacataattactttttgtc 21237599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 27214948 - 27215013
Alignment:
Q  343 atttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttt 408  Q
    ||||||||||||| |||| ||  | ||||||||||||| ||||||||||  ||||| |||||||||    
T  27214948 atttgaacttttaaagaatgaagatatcttagtcttttacatttcttacataatataattactttt 27215013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 31287301 - 31287378
Alignment:
Q  129 atgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaac 206  Q
    |||||||  ||| ||||| ||| ||||||| ||| |||||||| |||||| ||||| |||||||||||| ||| ||||    
T  31287301 atgtattcagatcatttttttactcaaccgcatggtttggttcggtttgcggttttaattttaccaaccgaaccaaac 31287378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 32296754 - 32296811
Alignment:
Q  203 aaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcata 260  Q
    |||| ||||| ||||| |||||||||||| ||||||||||| |||| ||||| |||||    
T  32296754 aaaccgcaacttaagaaaaacattaattaaacatatgtcacctagatcaatattcata 32296811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 410
Target Start/End: Original strand, 8568316 - 8568380
Alignment:
Q  347 gaacttttagagaaagat-aaaatcttagtcttttgcatttcttaccgaatatgattactttttg 410  Q
    |||||||||||||| ||| ||||| | ||||||||| |||||||||  |||| ||||||||||||    
T  8568316 gaacttttagagaatgattaaaatttcagtcttttgtatttcttacaaaataagattactttttg 8568380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 391
Target Start/End: Complemental strand, 11399452 - 11399400
Alignment:
Q  339 ttctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttac 391  Q
    ||||| |||||||||||||||| |||||||||| ||| |||| ||||| ||||    
T  11399452 ttctacttgaacttttagagaatgataaaatctaagtattttacatttgttac 11399400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 17493043 - 17493091
Alignment:
Q  237 atgtcacatagaccaatactcatagaaactcaatgaaaacttttataaa 285  Q
    ||||||| ||| | |||||||||| |||||||||| |||||||||||||    
T  17493043 atgtcacctaggcaaatactcataaaaactcaatggaaacttttataaa 17493091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 17560171 - 17560123
Alignment:
Q  237 atgtcacatagaccaatactcatagaaactcaatgaaaacttttataaa 285  Q
    ||||||| ||| | |||||||||| |||||||||| |||||||||||||    
T  17560171 atgtcacctaggcaaatactcataaaaactcaatggaaacttttataaa 17560123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 30079190 - 30079254
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactca 258  Q
    |||||||| |||| ||||||||||| |||  ||||||| | |||| |||| ||||||||||||||    
T  30079190 aaccaaaccaaaccgcaacataagaaaaatgttaattaaatatatctcacctagaccaatactca 30079254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 454
Target Start/End: Complemental strand, 33434438 - 33434327
Alignment:
Q  342 tatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttg 441  Q
    ||||| || ||||| |||| ||||||||| || |||||||||||| ||||  ||||  |||| |||||||   | | |||||||| ||||||||| ||||    
T  33434438 tatttaaaattttatagaatgataaaatcatactcttttgcatttgttacaaaatagaattattttttgtgcatgtttttaattt-ggtctatgtagttg 33434340  T
Q  442 taaacattgttgg 454  Q
     ||||||||||||    
T  33434339 aaaacattgttgg 33434327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 4e-39; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 180 - 322
Target Start/End: Complemental strand, 9330896 - 9330755
Alignment:
Q  180 gtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttt 279  Q
    |||| |||||| |||||||||  |||  ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  9330896 gtttatattttcccaaccaaatcaaatcgcaacataagaaaaacattaattaaacatatgtcacctagaccaatactcatagaaactcaatgaaaacttt 9330797  T
Q  280 tataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||||||| | ||||||||| |||||||||| | |||||||    
T  9330796 tataaaatgatatattttttct-tttgttaagtttgttctttg 9330755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 106 - 322
Target Start/End: Original strand, 26344559 - 26344774
Alignment:
Q  106 gtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaa 205  Q
    ||||||||| |||||||||||  ||||||| |||| | ||| ||| ||||||| ||| |||||||| |||||||||||| |||||||||||| ||| |||    
T  26344559 gtaaaaaaccgcatttggttcggatgtattcggatcaattttttactcaaccgcatggtttggttcggtttgcagttttgattttaccaaccgaaccaaa 26344658  T
Q  206 ctgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
    | |||| |||||| | ||| |||||  | |||| ||   | |||||||||||||||||||| ||||| |||||| ||||||||||| |||||||||| ||    
T  26344659 ccgcaatataagaaatacactaattgaatatatatcgtttggaccaatactcatagaaactaaatgagaactttaataaaatgacatattttttctc-tt 26344757  T
Q  306 gttaagtatcttctttg 322  Q
    ||||||| |||||||||    
T  26344758 gttaagtttcttctttg 26344774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 108 - 300
Target Start/End: Complemental strand, 35375743 - 35375545
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc-----aaact 202  Q
    |||||||  |||||||||| ||||||||  ||| ||||| ||| ||||||| ||| ||| |||  |||||| ||||||||||||||||||     ||||     
T  35375743 aaaaaaccacatttggttcgaatgtattcagatcatttttttactcaaccgcatggttttgtttggtttgcggtttttattttaccaacctaaccaaacc 35375644  T
Q  203 aaactgc-aacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttc 300  Q
    ||||||| ||||||||| |||||||||||| ||||||| ||  | |||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  35375643 aaactgccaacataagaaaaacattaattaaacatatgccatcttgaccaatacttatagaaactcaatggaaacttttataaaatgacatattttttc 35375545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 164 - 322
Target Start/End: Original strand, 35979844 - 35980000
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaa 263  Q
    |||||||  |||||| |||||  ||||||||||||||| |||| ||||||||||| ||||| |||||| |  |||||||| ||||| |||||||||||||    
T  35979844 tttggtttggtttgcggttttctttttaccaaccaaaccaaaccgcaacataagaaaaacactaattaaatctatgtcacctagacaaatactcatagaa 35979943  T
Q  264 actcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||||| |||||||||| |||||||| |||||||||| ||||||||| |||||||||    
T  35979944 actcaatggaaacttttat-aaatgacatattttttctc-ttgttaagtttcttctttg 35980000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 131 - 299
Target Start/End: Original strand, 21685088 - 21685256
Alignment:
Q  131 gtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaatt 230  Q
    |||||||||| ||||| ||| ||||  | ||| ||||||   |||||||||||||||||||||||| | || ||||  || ||||||| |||||||||||    
T  21685088 gtatttggatcatttttttactcaaatgcatggtttggtattgtttgcagtttttattttaccaactagaccaaaccacaccataagaaaaacattaatt 21685187  T
Q  231 agacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttttt 299  Q
    | ||||||||||| |||||||||||| |||||||||||||  | ||||||||||||||||| |||||||    
T  21685188 aaacatatgtcacctagaccaatacttatagaaactcaatagacacttttataaaatgacatatttttt 21685256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 104 - 291
Target Start/End: Original strand, 34721261 - 34721448
Alignment:
Q  104 ctgtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaacta 203  Q
    |||||||||||| ||||| |||   |||||||||||| | ||| ||||||||| | ||| ||| ||||||||||| ||||||||||||||| ||||||||    
T  34721261 ctgtaaaaaactacatttagtttggatgtatttggatcacttttttattcaactgcatggtttagttcagtttgcggtttttattttaccagccaaacta 34721360  T
Q  204 aactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    | ||||||||||||| ||||||||| || |  |||||||| || ||||| ||||||||||||  || | | ||||||||| |||||||    
T  34721361 atctgcaacataagaaaaacattaactaaatttatgtcacctaaaccaacactcatagaaacataagggagacttttatacaatgaca 34721448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 109 - 303
Target Start/End: Complemental strand, 50471665 - 50471473
Alignment:
Q  109 aaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactg 208  Q
    ||||| || |||||||||||||||||| |||| ||||   || ||||| | ||| |||||||| |||||| ||||| |||||| |||| ||||||||| |    
T  50471665 aaaaattgtatttggttcaaatgtattcggatcatttc--tactcaactgcatggtttggttcggtttgcggttttgattttatcaactaaactaaaccg 50471568  T
Q  209 caacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct 303  Q
    ||| |||||| |||||  || || | |||| |||| |||||||||||||||||||||||||||  |||||| ||||||||||| |||||||||||    
T  50471567 caatataagaaaaacacgaaataaatatatatcacctagaccaatactcatagaaactcaatggtaactttaataaaatgacacattttttctct 50471473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 163 - 291
Target Start/End: Complemental strand, 25507391 - 25507263
Alignment:
Q  163 atttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcataga 262  Q
    ||||||||  |||||| |||||||||||||||||||||| ||||  |||||||||| ||| | |||||| | ||||||| ||||  |||||| |||||||    
T  25507391 atttggtttggtttgcggtttttattttaccaaccaaaccaaaccacaacataagaaaaaaactaattaaatatatgtctcataatccaatattcataga 25507292  T
Q  263 aactcaatgaaaacttttataaaatgaca 291  Q
    |||||||||||||||||||||||||||||    
T  25507291 aactcaatgaaaacttttataaaatgaca 25507263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 154 - 322
Target Start/End: Original strand, 40094730 - 40094892
Alignment:
Q  154 aaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaat 253  Q
    ||||| |||||||||||| |||||| ||||| |||||||||||||||| |     ||| |||||| ||||| |||||| | |||| |||| |  ||||||    
T  40094730 aaccgcatgatttggttcggtttgcggttttcattttaccaaccaaacca-----caatataagaaaaacactaattaaatatatatcacttgaaccaat 40094824  T
Q  254 actcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||| |||||||||    
T  40094825 actcatagaaactcaatgaaaactttaataaaatgacatattatttctc-ttgttaagtttcttctttg 40094892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 322
Target Start/End: Complemental strand, 6248603 - 6248430
Alignment:
Q  153 caaccgtatgatttggttcagtttgcagtttttattttaccaacc-----aaactaaactgcaacataagataaacattaattagacatatgtcacatag 247  Q
    |||||| ||| |||||||| |||||| ||||| ||||||||||||     |||| |||| |||| |||||| ||||| |||||| | |||| |||| |||    
T  6248603 caaccgcatggtttggttcggtttgcggttttgattttaccaaccgaaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcacttag 6248504  T
Q  248 accaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| ||| ||||||||| |||||||||    
T  6248503 accaatactcatagaaattcaatggaaactttaataaaatgacatatttttcctc-ttgttaagtttcttctttg 6248430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 18834175 - 18834270
Alignment:
Q  209 caacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||||||||| ||||| |||||| | ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||    
T  18834175 caacataagaaaaacactaattaaatatatgtcacctagaccaatactaataaaaactcaatgaaaacttttataaaatgacatattttttctctt 18834270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 116 - 304
Target Start/End: Complemental strand, 44056305 - 44056107
Alignment:
Q  116 gcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaac----------caaactaaa 205  Q
    ||||||||||  |||||| | || | ||||||||| ||||||| ||| |||||||  |||||| ||||| |||||||||||          ||||| |||    
T  44056305 gcatttggtttgaatgtaatcgggtcattttcttactcaaccgcatggtttggttatgtttgcggttttcattttaccaactgaaccaaaccaaaccaaa 44056206  T
Q  206 ctgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    ||||||||||||| ||| ||| |||| ||||||||||| |||||||||||||||| ||||||||||||   ||||||||||||| | ||||||||||||    
T  44056205 ctgcaacataagaaaaatattgattaaacatatgtcacttagaccaatactcatataaactcaatgaatttttttataaaatgatatattttttctctt 44056107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 345 - 526
Target Start/End: Original strand, 32910129 - 32910303
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||| |||||||||| || |||||||||||||||||||||||||||  |||| |||||  |||||||  | | ||||| || |||||||||||||| ||    
T  32910129 ttgaaattttagagaatgagaaaatcttagtcttttgcatttcttacaaaataggattatgttttgtccatgtttttaactt-ggtctatgttgttggaa 32910227  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||      |||||||||||| |||||   |||||||||||||||||| ||||| |||||||||||| | ||||||||    
T  32910228 acattgt------aaaatgaaattgtaatatttaatgaaatttaaaacattgttgaaaatatgttgtgtttaaactttttaa 32910303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 322
Target Start/End: Original strand, 6693702 - 6693827
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| |||| |||||| ||||| |||||| | |||| |||| | ||||||||||||||||||||||||||||||||| ||||||||||  |    
T  6693702 aaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcacttggaccaatactcatagaaactcaatgaaaactttaataaaatgac--a 6693799  T
Q  294 ttttttctctttgttaagtatcttctttg 322  Q
    ||||||||| ||||||||| |||||||||    
T  6693800 ttttttctc-ttgttaagtttcttctttg 6693827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 108 - 291
Target Start/End: Complemental strand, 3937329 - 3937147
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    |||||||||||| |||||   |||||||||||||||||| |||  |||||  ||| |||||||| |||||| ||||| |||||| ||||||||| |||||    
T  3937329 aaaaaactgcatctggtttggatgtatttggataatttttttacccaaccacatggtttggttcggtttgcggttttgattttagcaaccaaaccaaact 3937230  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||| |||| | ||||| |||||| |  ||| |||  || ||||||||||||||||| ||||| |||||||| || ||||||||    
T  3937229 gcaatataa-aaaaacactaattaaatgtatatcatttataccaatactcatagaaattcaataaaaactttaattaaatgaca 3937147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 108 - 322
Target Start/End: Original strand, 25559525 - 25559745
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaa-- 205  Q
    |||||||||||||||||||  || |||| |||| ||||| ||| ||||||||||| |||||||| |||||  ||||| |||||||||||||||| |||      
T  25559525 aaaaaactgcatttggttcggatatattcggatcatttttttactcaaccgtatggtttggttcggtttgtggttttgattttaccaaccaaaccaaatc 25559624  T
Q  206 ---ctgcaacataagataaacattaattagacatatgtcacatagaccaatactc--atagaaactcaatgaaaacttttataaaatgacaaattttttc 300  Q
       | |||| |||||| ||||| |||||| | |||| |||  || ||||||||||  ||||||||||||||  || ||  ||||||||||| ||||| ||    
T  25559625 aaaccgcaatataagaaaaacaataattaaatatatatcatttataccaatactcgtatagaaactcaatgggaatttgaataaaatgacatattttatc 25559724  T
Q  301 tctttgttaagtatcttctttg 322  Q
    | |||||||||| |||||||||    
T  25559725 t-tttgttaagtttcttctttg 25559745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 108 - 277
Target Start/End: Original strand, 9961752 - 9961921
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    ||||||| ||||||||||   ||||||| |||| | ||| ||| ||||||| |||||||||||   ||||| ||||| ||||||| |||||| | ||||     
T  9961752 aaaaaaccgcatttggtttggatgtattcggatcacttttttactcaaccgcatgatttggtttgatttgctgttttcattttacgaaccaagccaaacc 9961851  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaact 277  Q
    ||| ||||| | ||| |||||||| |  |||||||| ||||||||||||||||||||||||||| |||||    
T  9961852 gcatcataaaaaaaaaattaattaaatttatgtcacctagaccaatactcatagaaactcaatggaaact 9961921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 9249705 - 9249815
Alignment:
Q  209 caacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgtt 308  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||||||   ||||  || ||||||||||||||||||||| |||||||||| |||||    
T  9249705 caacataagaaaaacattaattaaacatatgtcacctagaccaatactcaattaaacataa-gaaaacttttataaaatgacatattttttctc-ttgtt 9249802  T
Q  309 aagtatcttcttt 321  Q
    |||| ||||||||    
T  9249803 aagtttcttcttt 9249815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 10847039 - 10847253
Alignment:
Q  111 aaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttacca-----accaaactaaa 205  Q
    |||| ||||||||||   ||||||| | |||| ||| ||| ||||||| ||||||||||| | ||||  |||||||||||||||     ||||||| |||    
T  10847039 aaaccgcatttggtttggatgtattcgaataacttt-ttactcaaccgcatgatttggtttaatttgtggtttttattttaccagcccaaccaaaccaaa 10847137  T
Q  206 ctgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
    | ||||||||||| ||||| || |||   |||||||| |||||| |||||| |||| |||||||||  |||||||||||||||| || | |||||| |||    
T  10847138 ccgcaacataagaaaaacaatacttaattatatgtcatatagacaaatactaatagcaactcaatgggaacttttataaaatgataagtattttct-ttt 10847236  T
Q  306 gttaagtatcttctttg 322  Q
    ||||||| |||||||||    
T  10847237 gttaagtttcttctttg 10847253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 18310450 - 18310323
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| ||||||| ||| | ||| |||||| ||||||||||  || ||||||||| ||||||| ||||||||||||||||||||||||||      
T  18310450 aaccaaaccaaaccgcaacattagaaatacactaattaaacatatgtcatttaaaccaatacttatagaaattcaatgaaaacttttataaaatgacatg 18310351  T
Q  294 ttttttctctttgttaagtatcttctttg 322  Q
    ||||||||| ||| ||||| |||||||||    
T  18310350 ttttttctc-ttgataagtttcttctttg 18310323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 322
Target Start/End: Original strand, 36203048 - 36203175
Alignment:
Q  195 accaaactaaactgcaacataagataaacattaattagaca-tatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    ||||||| |||| ||||||||| | ||||| |||||| |   |||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| |    
T  36203048 accaaaccaaaccgcaacataataaaaacactaattaaaatctatgtcacctagaccaatactaatagaaactcaatggaaacttttataaaatgacata 36203147  T
Q  294 ttttttctctttgttaagtatcttctttg 322  Q
    ||| ||||| ||||||||| |||||||||    
T  36203148 tttgttctc-ttgttaagtttcttctttg 36203175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 164 - 322
Target Start/End: Original strand, 23474680 - 23474829
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaa 263  Q
    ||||||||  ||||| |||||||||||||||||||||| |||| ||||||||||| ||||          |||||||| | |||||||||||||||||||    
T  23474680 tttggttcgatttgcggtttttattttaccaaccaaaccaaaccgcaacataagaaaaact---------catatgtcgcctagaccaatactcatagaa 23474770  T
Q  264 actcaatgaaaac-ttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    | |||||| |||| ||||||||||||||| |||||||||| ||||||| | |||||||||    
T  23474771 attcaatggaaactttttataaaatgacatattttttctc-ttgttaattttcttctttg 23474829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 106 - 322
Target Start/End: Original strand, 27507013 - 27507238
Alignment:
Q  106 gtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttacc----------aa 195  Q
    ||||||||| |||||||||||  ||||||| |||| ||||| ||| ||||||| ||| |||||||| |||||| ||||| ||||||||          ||    
T  27507013 gtaaaaaaccgcatttggttcggatgtattcggatcatttttttactcaaccgcatgctttggttcggtttgcggttttgattttaccaactgaaccaaa 27507112  T
Q  196 ccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatt 295  Q
    |||||| |||| |||| |||||| ||||| |||||| | |||| |||  |||| | ||||||||||||| |||||  |||||||  ||||||||||  ||    
T  27507113 ccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcatctagatcgatactcatagaaattcaattgaaactttagtaaaatgacatttt 27507212  T
Q  296 ttttctctttgttaagtatcttctttg 322  Q
    ||||||| ||||||||| |||||||||    
T  27507213 ttttctc-ttgttaagtctcttctttg 27507238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 35992197 - 35992322
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| ||||||||||||||||  |||| |||||| |  |||||||| ||||| |||||||| ||||||| |||| |||||||||| |||||||| |    
T  35992197 aaccaaaccaaactgcaacataagaagaacactaattaaatctatgtcacctagacaaatactcaaagaaacttaatggaaacttttat-aaatgacata 35992295  T
Q  294 ttttttctctttgttaagtatcttcttt 321  Q
    ||||||||| ||||||||| ||||||||    
T  35992296 ttttttctc-ttgttaagtttcttcttt 35992322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 346 - 526
Target Start/End: Original strand, 26344808 - 26344987
Alignment:
Q  346 tgaacttttagagaaagataaaatc-ttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    |||||| |||||||| |||||||   ||||||||||| |||||||||  |||| ||||||||||||||   |  ||||| || ||| || || ||||  |    
T  26344808 tgaactcttagagaatgataaaaaaattagtcttttgtatttcttacaaaataggattactttttgtcc--acgtttaaatttggtatacgtagttggga 26344905  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||| |||| ||||||| |||||| ||| | |||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  26344906 acattattggatgaaaataaaattgtaatgttggatgaaatttaaaacattgctgaaaatatgttgtgttttaactttttaa 26344987  T

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Target: chr1; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 108 - 287
Target Start/End: Original strand, 26063715 - 26063904
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttctt-attcaaccgtatgatttggttcagtttgcagtttttattttaccaacc--------- 197  Q
    ||||||||||||||| ||   |||||| ||||||||||| || | | ||||  ||| |||||||| ||||| |||||| ||||||||||||             
T  26063715 aaaaaactgcatttgatttggatgtatatggataattttttttactaaaccacatggtttggttcggtttggagttttgattttaccaaccgaaccaaac 26063814  T
Q  198 aaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaat 287  Q
    |||| |||| |||| |||||| |||||||||||| | |||| |||| |||| |||||||||||||||||||||||||||||| |||||||    
T  26063815 aaaccaaaccgcaatataagaaaaacattaattaaatatatatcacctagagcaatactcatagaaactcaatgaaaactttaataaaat 26063904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 8269129 - 8269002
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||  |||| |||||| |||| |||||||||||| | |||| |||  |||||||||| | ||| |||||||||| ||||||||||||||||||| |    
T  8269129 aaccaaataaaaccgcaacacaagaaaaacattaattaaatatatatcatctagaccaatatttatataaactcaatggaaacttttataaaatgacata 8269030  T
Q  294 ttttttctctttgttaagtatcttctttg 322  Q
    | |||||| |||||||||| |||||||||    
T  8269029 tattttct-tttgttaagtttcttctttg 8269002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 299
Target Start/End: Complemental strand, 24630501 - 24630329
Alignment:
Q  128 aatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacatta 227  Q
    ||||||||||||| | ||| ||| ||||||| ||| ||||||||||||||| |||||||||| | ||||  ||| ||| ||||||||||||  |   |||    
T  24630501 aatgtatttggatcacttttttactcaaccgcatggtttggttcagtttgcggtttttatttcatcaactgaaccaaattgcaacataagaagagtgtta 24630402  T
Q  228 attagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttat-aaaatgacaaatttttt 299  Q
    |||  || |||||||| || |||| |||||| ||||||| ||| ||||||||||| ||||||||| |||||||    
T  24630401 attgaacctatgtcacctaaaccagtactcaaagaaacttaatcaaaacttttataaaaatgacatatttttt 24630329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 299
Target Start/End: Original strand, 16537385 - 16537526
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagacca 251  Q
    ||||||| |||||||||||  |||||| ||||||||||||||||||||||      ||| ||||| | ||||| |||||| |||||||  |  |||||||    
T  16537385 tcaaccgcatgatttggtttggtttgcggtttttattttaccaaccaaacc-----gcaccataaaa-aaacactaattaaacatatgcaatgtagacca 16537478  T
Q  252 atactcatagaaactcaatgaaaacttttataaaatgacaaatttttt 299  Q
    |||||| |||||| ||||||||||||||| |||||||||| |||||||    
T  16537479 atactcgtagaaagtcaatgaaaacttttgtaaaatgacatatttttt 16537526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 304
Target Start/End: Original strand, 25865576 - 25865707
Alignment:
Q  173 gtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatga 272  Q
    ||||||| ||||||||||| ||||| |||||||| ||||||||| | ||||| |||||| || ||| || ||||  |||||||||||||| |||  ||||    
T  25865576 gtttgcaatttttattttatcaaccgaactaaaccgcaacataaaaaaaacactaattaaacttatttcccataatccaatactcatagatacttgatga 25865675  T
Q  273 aaacttttataaaatgacaaattttttctctt 304  Q
     ||||||||| ||||||||  |||||||||||    
T  25865676 gaacttttatcaaatgacatgttttttctctt 25865707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 322
Target Start/End: Original strand, 52380331 - 52380460
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgt--cacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||||||||||||  ||| |||||| ||||| |||||| | |||| |  ||| |||||||||||| ||||||| ||||| |||||||| |||||||||||    
T  52380331 aaccaaactaaaccccaatataagaaaaacactaattaaatatatatatcacctagaccaatacttatagaaattcaataaaaactttaataaaatgaca 52380430  T
Q  292 aattttttctctttgttaagtatcttctttg 322  Q
     |||||||||| ||||||||| |||||||||    
T  52380431 tattttttctc-ttgttaagtttcttctttg 52380460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 17989514 - 17989432
Alignment:
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgac 290  Q
    ||||||||||| |||| ||||||| |  |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  17989514 gcaacataagaaaaactttaattaaatctatgtcacctagaccaatacacatagaaactcaatggaaacttttataaaatgac 17989432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 8165143 - 8165240
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||||||| |||| ||||||||| | |||  ||||||| ||||||||||| |||| ||||||||||| |||||||||||||  |||||||||||||||    
T  8165143 aaccaaaccaaaccgcaacataataaaaatgttaattaaacatatgtcacctagatcaatactcatataaactcaatgaaattttttataaaatgaca 8165240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 526
Target Start/End: Original strand, 8165302 - 8165481
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||||| ||||| || ||||||||||||||||||| |||||||||   ||||||| |||||||| ||    | ||||| |||| |||||||||||| ||    
T  8165302 ttgaactcttagataatgataaaatcttagtctttt-catttcttaaaaaatatgaatactttttttccaggtttttaacttgg-tctatgttgttggaa 8165399  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||    ||||||| |||||| ||| |  |||||||||||||||||| |  ||| || ||||||||||||||||||||    
T  8165400 acattgtaaaatgaaaattaaattgtaatgtttgatgaaatttaaaacattacgaaaaataggttgtgtttcagctttttaa 8165481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 11072971 - 11073067
Alignment:
Q  195 accaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    ||||||| |||| ||||||||||| |||  |||| || |||||| |||| || ||||||||| ||||||||||||| ||||||||||||||||||||    
T  11072971 accaaaccaaaccgcaacataagaaaaatgttaaataaacatatctcacctaaaccaatacttatagaaactcaataaaaacttttataaaatgaca 11073067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 163 - 271
Target Start/End: Original strand, 31451342 - 31451450
Alignment:
Q  163 atttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcataga 262  Q
    ||||||||||||||||  ||||||||||| ||||||||| |||| ||||||||| | ||||||||| || || || ||||| || | ||||||||||| |    
T  31451342 atttggttcagtttgcgatttttattttaacaaccaaaccaaaccgcaacataaaaaaaacattaactaaacctacgtcacctacagcaatactcataaa 31451441  T
Q  263 aactcaatg 271  Q
    |||||||||    
T  31451442 aactcaatg 31451450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 419 - 526
Target Start/End: Complemental strand, 34914381 - 34914275
Alignment:
Q  419 tttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcag 518  Q
    |||||||||| ||||||| ||||  ||||||||||| ||||||| |||||| ||  |  ||||||||||||||||||||||||| |||||||||||| ||    
T  34914381 tttaatttgg-tctatgtagttgggaacattgttggatgaaaataaaattgtaaggtcagatgaaatttaaaacattgctgaaaatatgttgtgttttag 34914283  T
Q  519 ctttttaa 526  Q
     |||||||    
T  34914282 gtttttaa 34914275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 526
Target Start/End: Complemental strand, 41751456 - 41751291
Alignment:
Q  357 agaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatcttta-atttgggtctatgttgttgtaaacattgttggt 455  Q
    |||| |||||| ||||| |||||||||||||||||  ||||  |||||||||||||  ||| |||  ||||||     |||||||| ||||||||||||     
T  41751456 agaatgataaagtcttaatcttttgcatttcttactaaataaaattactttttgtccatattttttgatttgg-----tgttgttgaaaacattgttgga 41751362  T
Q  456 tgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||||||||| ||| |  ||||||||| | ||||||| ||||| || ||||||||| ||| ||||||    
T  41751361 tgaaaatgaaattgtaatgtcagatgaaattcataacattgttgaaaataagttgtgttttagcattttaa 41751291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 50951521 - 50951700
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    ||||||||||||||||||  |||| ||| | || |||||  |||||||||| ||| |||||||| ||| || ||||||||||||| |||||||  ||||     
T  50951521 aaaaaactgcatttggtttgaatgcattcgaattatttt--tattcaaccgcatggtttggttcggttggcggtttttattttactaaccaaatcaaacc 50951618  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatga 289  Q
     |||||||| |  |||  |||||  || ||  ||||  |||||||||||||||||||||||||  || ||||||||||||||    
T  50951619 acaacataataacaacgctaattgaacctaactcaccaagaccaatactcatagaaactcaattgaagcttttataaaatga 50951700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 6248397 - 6248224
Alignment:
Q  345 ttgaacttttagagaaagataaaatctt-agtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||||||||||||||||||||||  || ||||||||  |||||||||  |||||||||||||||||| |  | |||       |||||| || |||       
T  6248397 ttgaacttttagagaaagataaaaaatttagtcttttctatttcttacaaaatatgattactttttgtgt--acctt-------ggtctacgtagttcag 6248307  T
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||| | ||||||| |||||| ||| | |||| ||||||||||||||||||||| ||| |||||||| ||||||||||    
T  6248306 aacattgtttgatgaaaataaaattgtaatgttggattaaatttaaaacattgctgaaaatatattgtgttttagctttttaa 6248224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 347 - 496
Target Start/End: Original strand, 39167028 - 39167176
Alignment:
Q  347 gaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaac 446  Q
    |||||||||||||| |  |||||| | || ||||||||||||||||||  ||| |||||||| |||  | | |||||||||| | ||||||  |||||||    
T  39167028 gaacttttagagaatgtaaaaatcctcgtattttgcatttcttaccgatgatggttacttttggtccatgtttttaatttggtt-tatgttaatgtaaac 39167126  T
Q  447 attgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattg 496  Q
    |||| ||  ||||||| |||||| ||| | ||||||||||||||||||||    
T  39167127 attgatgaatgaaaataaaattgtaatgttggatgaaatttaaaacattg 39167176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 285
Target Start/End: Complemental strand, 382634 - 382448
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaac- 206  Q
    ||||||||||||||||||  ||| ||| ||||| ||||| ||||| ||  | ||| |||||||| |||||| ||||||||||||||| |||||| |||      
T  382634 aaaaaactgcatttggtttgaatttatctggatcatttt-ttatttaattgcatggtttggttcggtttgcggtttttattttaccagccaaaccaaatc 382536  T
Q  207 ---------tgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaa 285  Q
             |||||||||||| ||||| |||||| |  |||||||| |||||||||  ||||| ||||||||||||||| ||||||||    
T  382535 aatccaacttgcaacataagaaaaacactaattaaatctatgtcacttagaccaatgatcataaaaactcaatgaaaacatttataaa 382448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 32937053 - 32937133
Alignment:
Q  198 aaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaactt 278  Q
    |||| |||| ||||||||||| |||||||||||| |||| |||||| |||||||||||||||| ||||||||  |||||||    
T  32937053 aaacaaaaccgcaacataagaaaaacattaattaaacatgtgtcacctagaccaatactcatataaactcaacaaaaactt 32937133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 419 - 526
Target Start/End: Complemental strand, 12973819 - 12973712
Alignment:
Q  419 tttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcag 518  Q
    ||||| || |||||| |||||||  ||||||||||  ||||||| |||||| ||| | |||||||||||||||||||||| ||| ||||||| |||| |     
T  12973819 tttaaatttggtctacgttgttgggaacattgttgaatgaaaataaaattgtaatgttggatgaaatttaaaacattgctaaaaatatgttgcgttttaa 12973720  T
Q  519 ctttttaa 526  Q
    ||||||||    
T  12973719 ctttttaa 12973712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 197 - 304
Target Start/End: Original strand, 32909972 - 32910079
Alignment:
Q  197 caaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattt 296  Q
    ||||| |||| ||||||||||| |||  ||||||| | |||| |||| |||| ||||| ||||||||||| ||||||||||||||||||| |||  |||     
T  32909972 caaaccaaaccgcaacataagaaaaatgttaattaaatatatctcacctagatcaataatcatagaaacttaatgaaaacttttataaaacgacgcattc 32910071  T
Q  297 tttctctt 304  Q
    ||||||||    
T  32910072 tttctctt 32910079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 16063386 - 16063288
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaac 206  Q
    |||||||  |||||| || | ||||||| | |||||||| ||| ||||||| ||||||||||||||||||| ||||| |||||||||||| ||| ||||    
T  16063386 aaaaaaccacatttgatttagatgtattcgaataatttttttactcaaccgcatgatttggttcagtttgcggttttgattttaccaacccaaccaaac 16063288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 299
Target Start/End: Original strand, 39157809 - 39158014
Alignment:
Q  105 tgtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaa 204  Q
    |||||||||| |||||||||||  |||||||||||| | ||||||| ||||| ||||  ||| |||  |||||  |||||||||||| ||||| ||| ||    
T  39157809 tgtaaaaaaccgcatttggttcggatgtatttggatcactttcttactcaactgtatagtttagtttggtttgtggtttttattttatcaaccgaaccaa 39157908  T
Q  205 act----------gcaacataagataaacattaattagacatatgtcacatagacc-aatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    ||           ||||||||||||||||| |||||| |||| |||||| || ||| || ||||| | |  |||||||| |||||||||||||||||| |    
T  39157909 accaaatcaaaccgcaacataagataaacactaattaaacatttgtcacctaaaccaaacactcacatagcctcaatgataacttttataaaatgacata 39158008  T
Q  294 tttttt 299  Q
    ||||||    
T  39158009 tttttt 39158014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 444 - 526
Target Start/End: Original strand, 40095268 - 40095350
Alignment:
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||| ||||||| |||||| ||| | | |||||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  40095268 aacattgttggatgaaaataaaattgtaatgttgaatgaaatttaaaacattgttgaaaatatgttgcgttttagctttttaa 40095350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 526
Target Start/End: Original strand, 52380489 - 52380672
Alignment:
Q  341 ctatttgaacttttagagaaagataaaa-tcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgt 439  Q
    ||||||||||| ||||||||  |||||| | ||||||||||| |||||||||  | ||||||||||||||||     | |||||||| |||||| |||||    
T  52380489 ctatttgaactcttagagaatcataaaacttttagtcttttgtatttcttacaaactatgattactttttgtgcgcgt-tttaattt-ggtctacgttgt 52380586  T
Q  440 tgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |   | ||||||||| |||| || |||||| ||| | ||||||||||||||| ||||| |||| |||||| ||||| ||||||||||    
T  52380587 tcggatcattgttggatgaagataaaattgtaatgttggatgaaatttaaaa-attgcggaaaatatgttttgttttagctttttaa 52380672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 266
Target Start/End: Complemental strand, 52829312 - 52829210
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaa 263  Q
    ||||||||  ||||||||||||||||||| |||| ||| |||| ||||||||||| |||  | || || |  ||||||||||| ||||||||||||||||    
T  52829312 tttggttcgatttgcagtttttattttactaaccgaaccaaaccgcaacataagaaaaatgtcaactataactatgtcacataaaccaatactcatagaa 52829213  T
Q  264 act 266  Q
    |||    
T  52829212 act 52829210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 13056166 - 13056239
Alignment:
Q  226 taattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttttt 299  Q
    |||||| || |||||||| ||||| |||||||||||||||||| ||| |||||||||| ||||||| |||||||    
T  13056166 taattaaacttatgtcacctagactaatactcatagaaactcagtgataacttttatagaatgacatatttttt 13056239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 322
Target Start/End: Original strand, 15881716 - 15881920
Alignment:
Q  116 gcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacata 215  Q
    ||||||||||||||||||||||||| || || ||| |||||   ||| ||||||||   |||  |||||||| || |||||  ||  |||| ||||||||    
T  15881716 gcatttggttcaaatgtatttggatcatatttttactcaactacatggtttggttcgaattgtggtttttatatttccaacttaatcaaaccgcaacata 15881815  T
Q  216 agataaacattaattagacatatgtcacatagaccaatactcatagaaactcaa-tgaaaacttttataaaatgacaaattttttctctttgttaagtat 314  Q
    ||| ||||| |||||| | |||| |||| || | |||||||||| |||| |||| || ||||||||||||||||||   |||||| |  ||||||||| |    
T  15881816 agaaaaacactaattaaatatat-tcacctacatcaatactcattgaaagtcaattggaaacttttataaaatgac--ttttttttttcttgttaagttt 15881912  T
Q  315 cttctttg 322  Q
    ||||||||    
T  15881913 cttctttg 15881920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 10847282 - 10847380
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgtt 440  Q
    ||||||||||||||  | || ||||||||||||||||||| ||||||||||  ||||  |||||||||||||   || |||||||| |||||||||||||    
T  10847282 ctatttgaacttttcaaaaatgataaaatcttagtcttttacatttcttacgtaatagaattactttttgtccacatttttaattt-ggtctatgttgtt 10847380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 17652069 - 17652002
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||  | ||| |||||||||||||    
T  17652069 ttgaacttttagagaataataaaatcttagtcttttacatttcttacatagtataattactttttgtc 17652002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 351 - 477
Target Start/End: Original strand, 11073135 - 11073260
Alignment:
Q  351 ttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattg 450  Q
    |||||||||| ||||| ||||||||||||||||||||||||  |||| |||| | |||||||  | | || || || |||||||||||||| ||||||||    
T  11073135 ttttagagaatgataacatcttagtcttttgcatttcttacaaaataggatttcgttttgtccatgttttgaactt-ggtctatgttgttggaaacattg 11073233  T
Q  451 ttggttgaaaatgaaattgaaatatgg 477  Q
    |     ||||||||||||| |||||||    
T  11073234 taaaaagaaaatgaaattgtaatatgg 11073260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 441
Target Start/End: Complemental strand, 382378 - 382282
Alignment:
Q  344 tttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttg 441  Q
    ||||||||| || |||| |||||||| |||||| ||| |||||||||| | ||||||||||||||||||   || ||||| || ||||||||||||||    
T  382378 tttgaacttatacagaacgataaaattttagtcatttacatttcttacagtatatgattactttttgtccgcatttttaa-ttcggtctatgttgttg 382282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 496
Target Start/End: Complemental strand, 11537101 - 11536969
Alignment:
Q  363 ataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaat 462  Q
    |||||||||||   |||||||||||||||  |||| |||||| ||||||    || |||||||||| |||  || ||||||||||||||||| || ||||    
T  11537101 ataaaatcttaactttttgcatttcttacgaaataggattacattttgttaacatttttaatttgg-tctgcgtagttgtaaacattgttggatgtaaat 11537003  T
Q  463 gaaattgaaatatgggatgaaatttaaaacattg 496  Q
    ||||||| ||| |   ||||||||||||||||||    
T  11537002 gaaattgtaatgttaaatgaaatttaaaacattg 11536969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 502
Target Start/End: Complemental strand, 25507201 - 25507046
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    |||||||||||||  | |||||||| ||| |||||||||||||||||  |||||||||||||||| ||    | ||| ||||  || |||||||||   |    
T  25507201 ttgaacttttagacgatgataaaatattaatcttttgcatttcttacaaaatatgattactttttatc-cactttttcattt-agtttatgttgtttaga 25507104  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaa 502  Q
    || ||||||| ||||||| |||||| ||| | |||| ||||||||||||||| |||||    
T  25507103 actttgttggatgaaaataaaattgtaatgttggataaaatttaaaacattgttgaaa 25507046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 438 - 515
Target Start/End: Complemental strand, 27350871 - 27350794
Alignment:
Q  438 gttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||| ||| |||||||| ||||||| |||||| ||| | ||||||||||||||||| | |||||| ||||||||||||    
T  27350871 gttgaaaatattgttggatgaaaataaaattgtaatgttggatgaaatttaaaacagtactgaaaatatgttgtgttt 27350794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 36782025 - 36782093
Alignment:
Q  250 caatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct-ttgttaagtatctt 317  Q
    ||||||| |||||||||||||| ||||||| ||||||| ||| ||||||||||| ||||||||| ||||    
T  36782025 caatacttatagaaactcaatggaaactttaataaaattacatattttttctctcttgttaagtttctt 36782093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 515
Target Start/End: Complemental strand, 3935685 - 3935614
Alignment:
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    ||||||||||| || |||| |||||| ||| | |||||||||||||||||||| ||| | ||||||||||||    
T  3935685 aacattgttggatggaaataaaattgtaatgttggatgaaatttaaaacattgatgagaatatgttgtgttt 3935614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 15881994 - 15882049
Alignment:
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctg 499  Q
    ||||||||||| | |||||||||||| |||||  ||||||||||||||||||||||    
T  15881994 aacattgttggataaaaatgaaattgtaatatttgatgaaatttaaaacattgctg 15882049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 35992356 - 35992423
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||  ||||  ||||| |||||||    
T  35992356 ttgaacttttagagaataataaaatcttagtcttttacatttcttacataatagaattacgttttgtc 35992423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 41751704 - 41751576
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||  |||| ||||||||| | || ||||||||| || ||| ||||||||  |||| |||||||||||||||  |||||||||||| ||| |||      
T  41751704 aaccaaatcaaacagcaacataaaa-aatcattaattaaacctatttcacatagttcaatgctcatagaaactcaaaaaaaacttttatagaataacatt 41751606  T
Q  294 ttttttctct-ttgttaagtatcttctttg 322  Q
    |||||| ||| ||||||| | |||||||||    
T  41751605 ttttttttctcttgttaattttcttctttg 41751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 45949159 - 45949239
Alignment:
Q  224 attaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
    |||||| | |||||||||||||||||||||||||||| ||| |||||| ||| ||||| ||| ||||   ||||||||||||    
T  45949159 attaatcaaacatatgtcacatagaccaatactcataaaaattcaatggaaa-ttttacaaactgactttttttttctcttt 45949239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 11537323 - 11537256
Alignment:
Q  198 aaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaact 266  Q
    ||||||| | ||||||||||| ||||| |||||| ||||||||||| |||| ||||||||||| |||||    
T  11537323 aaactaagccgcaacataaga-aaacactaattaaacatatgtcacttagaacaatactcataaaaact 11537256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 12974019 - 12973924
Alignment:
Q  226 taattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||| | |||| |||| | ||| ||||||||||||| |  |||| ||||||| ||||||||||| |||||| || |||||||||| |||||||||    
T  12974019 taattaaatatatatcacttggactaatactcatagaatcctaatggaaactttaataaaatgacatatttttcct-tttgttaagtttcttctttg 12973924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 526
Target Start/End: Complemental strand, 16063104 - 16062999
Alignment:
Q  419 tttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcag 518  Q
    |||||||||| |||| || ||||  ||||||||||| || |||| | |||| ||| | ||||||||| |||||||||||| ||| ||||| |||||| ||    
T  16063104 tttaatttgg-tctacgtagttgagaacattgttggatggaaataatattgtaatgttggatgaaatgtaaaacattgct-aaaatatgtcgtgttttag 16063007  T
Q  519 ctttttaa 526  Q
    ||||||||    
T  16063006 ctttttaa 16062999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 526
Target Start/End: Original strand, 36782204 - 36782310
Alignment:
Q  419 tttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcag 518  Q
    ||||| || ||||||||| ||||  ||||||||||  | ||||| |||||| ||| | ||||||||||| |||||||||||||| |||| | ||||| |     
T  36782204 tttaaatttggtctatgtagttgggaacattgttgaataaaaataaaattgtaatgttggatgaaattt-aaacattgctgaaaatatgctctgttttaa 36782302  T
Q  519 ctttttaa 526  Q
    ||||||||    
T  36782303 ctttttaa 36782310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 39358250 - 39358358
Alignment:
Q  212 cataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaag 311  Q
    ||||||| |||| ||||||| ||| || |||| ||| |||||||||||||||| || |||  ||| ||| || |||||||   |||||||||||||||||    
T  39358250 cataagagaaacgttaattacacaaatatcacttagtccaatactcatagaaattcgatg--aacgtttgtagaatgacatcatttttctctttgttaag 39358347  T
Q  312 tatcttctttg 322  Q
    | |||| ||||    
T  39358348 tttcttttttg 39358358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 426
Target Start/End: Complemental strand, 52829126 - 52829051
Alignment:
Q  351 ttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaattt 426  Q
    ||||| |||| |||||||||||||| |||| ||||||||||  ||||| ||||||||| |||  ||| ||||||||    
T  52829126 ttttatagaatgataaaatcttagtattttacatttcttacataatataattacttttcgtccatatttttaattt 52829051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 526
Target Start/End: Original strand, 6694265 - 6694307
Alignment:
Q  484 atttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||||||||||| |||||||||||| | ||||||||    
T  6694265 atttaaaacattgctgaaaatatgttgtgttttaactttttaa 6694307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 526
Target Start/End: Complemental strand, 17989278 - 17989200
Alignment:
Q  448 ttgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||| ||||||||||||   ||||||  ||||||||  |||||||| ||||| |||||||||||| | ||||||||    
T  17989278 ttgttgggtgaaaatgaaatactaatatgaaatgaaattataaacattgttgaaaatatgttgtgttttacctttttaa 17989200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 35375490 - 35375424
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgt 411  Q
    |||||||||||| ||| | |||||| |||| |||||| ||||||||   ||||||||||||||||||    
T  35375490 ttgaacttttagtgaatgttaaaatattagacttttgtatttcttataaaatatgattactttttgt 35375424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 494
Target Start/End: Original strand, 39158085 - 39158214
Alignment:
Q  364 taaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatg 463  Q
    |||||||||||| ||| | ||||||| |  |||| ||| ||||||| ||  | | |||||||||| | ||||||||||  ||||||||| | ||||||||    
T  39158085 taaaatcttagtatttagaatttctttcgaaataggataactttttatccatctttttaatttggtt-tatgttgttgggaacattgttagatgaaaatg 39158183  T
Q  464 aaattgaaatatgggatgaaatttaaaacat 494  Q
    |||||| ||| | | |||| |||||||||||    
T  39158184 aaattgtaatgttgaatgacatttaaaacat 39158214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 44056057 - 44055876
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||||||||||| || |||||||| | |||||||||||||| |||   |||| ||||||||||| ||    | ||||| ||  ||||||||||||| ||    
T  44056057 ttgaacttttagaaaatgataaaatttaagtcttttgcatttattagaaaataagattactttttttccacgtttttaactt-agtctatgttgttggaa 44055959  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatg-aaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||    ||||||| |||||| | | |  || | ||||||||||||||| ||||| |||| ||| ||||| ||||||||    
T  44055958 acattgtaaaatgaaaattaaattgtattgtttgaagaaaatttaaaacattgttgaaaatatgatgtatttcaactttttaa 44055876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 50311197 - 50311139
Alignment:
Q  173 gtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaatta 231  Q
    |||||| |||||||||||| ||||| ||| |||||||||||||| | ||||| ||||||    
T  50311197 gtttgcggtttttattttagcaaccgaaccaaactgcaacataaaagaaacactaatta 50311139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 8268973 - 8268924
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtcttttgcatttctta 390  Q
    |||| |||||||||| |||| ||  |||||||||||||||||||||||||    
T  8268973 ctatatgaacttttaaagaatgaagaaatcttagtcttttgcatttctta 8268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 411
Target Start/End: Complemental strand, 18310244 - 18310199
Alignment:
Q  366 aaatcttagtcttttgcatttcttaccgaatatgattactttttgt 411  Q
    |||||||||||||||  |||||||||  ||||||||||||||||||    
T  18310244 aaatcttagtcttttatatttcttacaaaatatgattactttttgt 18310199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 19051445 - 19051377
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtctttt-gcatttcttaccgaatatgattactttttgtc 412  Q
    ||||| ||| |||||| ||| |||||||||| |||| |||||||||||  |||| ||||||||||||||    
T  19051445 ttgaattttcagagaatgatgaaatcttagtttttttgcatttcttacataataagattactttttgtc 19051377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 341 - 526
Target Start/End: Complemental strand, 40436765 - 40436582
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgtt 440  Q
    |||||| || |||||||||| ||||||||||||||||||| |||||||||   ||||||||||| |||||||  | | ||||| || |||||||||||||    
T  40436765 ctatttaaaattttagagaatgataaaatcttagtctttttcatttcttataaaatatgattacattttgtccatgtttttaactt-ggtctatgttgtt 40436667  T
Q  441 gtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    | |||||||||    |||||||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  40436666 gaaaacattgtaaaatgaaaatgaaattgtaatatttgatgaaatttaaaacattgctgaaa-tatgttgtgtttcagttttttaa 40436582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 108 - 302
Target Start/End: Original strand, 12659773 - 12659976
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc---------- 197  Q
    ||||||| |||||||||||  ||||||| ||||  |||||||| ||||||| ||| ||||||||||||||| |||| |||||||||||||              
T  12659773 aaaaaaccgcatttggttcggatgtattcggatcgttttcttactcaaccgcatggtttggttcagtttgcggtttctattttaccaaccgaaccaaacc 12659872  T
Q  198 aaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttt 297  Q
    |||| ||||  ||||||| || |||||||||||| |||||||||||||| | |||||||||||||||||||||| |||||| |||||||||||| |||||    
T  12659873 aaaccaaaccacaacataggaaaaacattaattaaacatatgtcacataaatcaatactcatagaaactcaatg-aaacttctataaaatgacatatttt 12659971  T
Q  298 ttctc 302  Q
    |||||    
T  12659972 ttctc 12659976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 304
Target Start/End: Complemental strand, 27675033 - 27674893
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaa 263  Q
    |||||||  |||||| ||||  |||||||||||||||| |||| ||||||||||| |||  || |||| ||||||||| | |||||||||||||||||||    
T  27675033 tttggtttggtttgcggtttaaattttaccaaccaaaccaaaccgcaacataagaaaaatgttcattaaacatatgtcccctagaccaatactcatagaa 27674934  T
Q  264 actcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    ||||| || ||||||||||||||||||| ||||||||||||    
T  27674933 actcattggaaacttttataaaatgacatattttttctctt 27674893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 1271617 - 1271490
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| |||| |||||| ||||| |||||| | |||  |||| ||||||||||||||||||||||||||| ||||||| ||||||||| | |    
T  1271617 aaccaaaccaaaccgcaatataagaaaaacactaattaaatatacatcacttagaccaatactcatagaaactcaatggaaactttaataaaatgatata 1271518  T
Q  294 ttttttctctttgttaagtatcttctttg 322  Q
    ||||||||| ||||||||| |||||||||    
T  1271517 ttttttctc-ttgttaagtttcttctttg 1271490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 164 - 301
Target Start/End: Original strand, 12193029 - 12193168
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaa--actaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatag 261  Q
    |||||||| |||||| ||||| |||||||||||| |  ||||||| |||| ||||||  ||||||||||| | |||| |||| |||||||||||||||||    
T  12193029 tttggttcggtttgcggttttgattttaccaaccgatcactaaaccgcaatataagaagaacattaattaaatatatatcacctagaccaatactcatag 12193128  T
Q  262 aaactcaatgaaaacttttataaaatgacaaattttttct 301  Q
    ||| |||||| ||||||| |||||||||||  ||||||||    
T  12193129 aaattcaatggaaactttaataaaatgacattttttttct 12193168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 164 - 301
Target Start/End: Original strand, 12437457 - 12437596
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaa--actaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatag 261  Q
    |||||||| |||||| ||||| |||||||||||| |  ||||||| |||| ||||||  ||||||||||| | |||| |||| |||||||||||||||||    
T  12437457 tttggttcggtttgcggttttgattttaccaaccgatcactaaaccgcaatataagaagaacattaattaaatatatatcacctagaccaatactcatag 12437556  T
Q  262 aaactcaatgaaaacttttataaaatgacaaattttttct 301  Q
    ||| |||||| ||||||| |||||||||||  ||||||||    
T  12437557 aaattcaatggaaactttaataaaatgacattttttttct 12437596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 13325837 - 13325657
Alignment:
Q  143 ttttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtca 242  Q
    |||| ||| ||||||| ||| |||||||| |||||| ||||| |||||| ||||||||| |||| |||| |||||| ||||| |||||| | |||| | |    
T  13325837 tttttttactcaaccgcatggtttggttcggtttgcggttttgattttatcaaccaaaccaaaccgcaatataagaaaaacaataattaaatatatatta 13325738  T
Q  243 cat--agaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
     ||  ||||||||||||||||||| |||||| | | ||| |||||||||| ||||||||||| || |||||| |||||||||    
T  13325737 tatctagaccaatactcatagaaattcaatggagattttaataaaatgac-aattttttctcctttttaagtttcttctttg 13325657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 266
Target Start/End: Complemental strand, 4785799 - 4785641
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    |||||| ||||||||||||| |||||||||||| | ||| ||| ||||||| ||| |||||||| |||||||||||| ||||||| |||||||  ||||     
T  4785799 aaaaaattgcatttggttcagatgtatttggatcaattttttactcaaccgcatggtttggttcggtttgcagttttgattttacaaaccaaatcaaacc 4785700  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaact 266  Q
    | ||  ||||| ||||| |||||| | |||| |||| | || |||||| ||||||||||    
T  4785699 gtaatgtaagaaaaacactaattaaatatatatcacctggatcaatacccatagaaact 4785641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 172 - 301
Target Start/End: Complemental strand, 40436943 - 40436814
Alignment:
Q  172 agtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatg 271  Q
    ||||||| ||||| |||||||||||||||| ||| |||||||||||| |    ||||||| ||| || |||  ||||| |||||| ||||||||||||||    
T  40436943 agtttgcggttttcattttaccaaccaaaccaaattgcaacataagaaattttttaattaaacaaatctcatctagacaaatacttatagaaactcaatg 40436844  T
Q  272 aaaacttttataaaatgacaaattttttct 301  Q
     ||| ||||||||||||||| |||||||||    
T  40436843 gaaatttttataaaatgacatattttttct 40436814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 28441905 - 28441826
Alignment:
Q  242 acatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||| |||||||||    
T  28441905 acatagatcaatactcataaaaactcaatgaaaacttttataaaatgacatattctttct-tttgttaagtttcttctttg 28441826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 526
Target Start/End: Original strand, 9012460 - 9012774
Alignment:
Q  220 aaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttct 319  Q
    ||||| |||||| |||||||| || || ||||||||||| |  ||||||||| ||||||||||||||||||| || ||||||| ||||||||| ||||||    
T  9012460 aaacactaattaaacatatgttacctaaaccaatactcaaatgaactcaatggaaacttttataaaatgacatatattttctc-ttgttaagtttcttct 9012558  T
Q  320 ttgnnnnnnnc-tca---------ttaaattctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattacttttt 409  Q
    |||       | |||         |||  | ||| || ||||||||||||| |||||||||||||  |||||||||||||||  |||| |||||||||||    
T  9012559 ttgctattaacttcaaagatgtatttatgtgctacttaaacttttagagaatgataaaatcttagctttttgcatttcttacaaaataagattacttttt 9012658  T
Q  410 gtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgtt 509  Q
    |||    | ||||| || | | ||||| ||||  ||||||||||| | ||||| |||||| ||| |  ||||||||||||||||||  ||||| ||| ||    
T  9012659 gtcaacgtttttaa-ttagatatatgtagttgccaacattgttggataaaaataaaattgtaatgttcgatgaaatttaaaacattattgaaaatatttt 9012757  T
Q  510 gtgtttcagctttttaa 526  Q
    |||||| || |||||||    
T  9012758 gtgttttagttttttaa 9012774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 287
Target Start/End: Original strand, 3155623 - 3155716
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaat 287  Q
    |||||||| |||| ||||||||| | ||||| |||||| | |||| | |||||||  |||||||||||||||||||||||||||||||||||||    
T  3155623 aaccaaaccaaaccgcaacataaaaaaaacactaattaaatatatataacatagataaatactcatagaaactcaatgaaaacttttataaaat 3155716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 345 - 511
Target Start/End: Complemental strand, 13325624 - 13325459
Alignment:
Q  345 ttgaacttttagagaaagat-aaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||||| |||||||| ||| ||||| |||||||||||||||||||||  |||||||||||||||||  || |  ||| | || ||||||  | ||||      
T  13325624 ttgaactcttagagaatgattaaaattttagtcttttgcatttcttacaaaatatgattactttttg--ttcacgttttaatttggtctacttagttgag 13325527  T
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgt 511  Q
    ||||||||| | || |||| |||||| ||| | |||||||||||||||||| ||||||| ||||||||    
T  13325526 aacattgttagatggaaataaaattgtaatgttggatgaaatttaaaacatcgctgaaaatatgttgt 13325459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 28802031 - 28801927
Alignment:
Q  220 aaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttc-tct-ttgttaagtatctt 317  Q
    ||||| |||||| ||||||||||| |||| ||||||| |||||||||||||| ||| |||||||||||||||  ||||||| ||| || |||||||||||    
T  28802031 aaacactaattaaacatatgtcacctagatcaatacttatagaaactcaatgtaaatttttataaaatgacattttttttcttctgtttttaagtatctt 28801932  T
Q  318 ctttg 322  Q
    |||||    
T  28801931 ctttg 28801927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 12073863 - 12073929
Alignment:
Q  238 tgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||||| |||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||    
T  12073863 tgtcacctagaccaatactcataaaaacttaatgaaaacttttacaaaatgacatattttttctctt 12073929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 26774839 - 26774928
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc 197  Q
    |||||||||||||||| ||  |||||||   ||  |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  26774839 aaaaaactgcatttggatcggatgtattcatatcgttttcttactcaaccgcatggtttggttcagtttgcagtttttattttaccaacc 26774928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 203 - 296
Target Start/End: Complemental strand, 30943035 - 30942942
Alignment:
Q  203 aaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattt 296  Q
    |||| |||| |||| | ||||| |||||| ||||||||||| ||||  |||| | |||||||||||||||||||||||||||||||||| ||||    
T  30943035 aaaccgcaatataaaaaaaacactaattaaacatatgtcacctagaataatatttatagaaactcaatgaaaacttttataaaatgacatattt 30942942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 526
Target Start/End: Original strand, 12193248 - 12193401
Alignment:
Q  371 ttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattga 470  Q
    ||||||||||| |||||||||  |||||||||||||||| |     | |||||||||| |||| ||||||   ||||||||| | |||||||  ||| |     
T  12193248 ttagtcttttgtatttcttacaaaatatgattactttttatgcacgt-tttaatttgg-tctacgttgtttagaacattgttcgatgaaaatataatggt 12193345  T
Q  471 aatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||| | |||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  12193346 aatgttggataaaatttaaaacattgctgaaaatatgttgtgttttagctttttaa 12193401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 526
Target Start/End: Original strand, 12437676 - 12437829
Alignment:
Q  371 ttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattga 470  Q
    ||||||||||| |||||||||  |||||||||||||||| |     | |||||||||| |||| ||||||   ||||||||| | |||||||  ||| |     
T  12437676 ttagtcttttgtatttcttacaaaatatgattactttttatgcacgt-tttaatttgg-tctacgttgtttagaacattgttcgatgaaaatataatggt 12437773  T
Q  471 aatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||| | |||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  12437774 aatgttggataaaatttaaaacattgctgaaaatatgttgtgttttagctttttaa 12437829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 28072643 - 28072778
Alignment:
Q  109 aaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactg 208  Q
    ||||||||||||||||||  | |||||| ||   | || ||| ||||||| ||| |||||||  |||||| |||||||||||| ||||  ||| |||| |    
T  28072643 aaaaactgcatttggttcggaagtatttagaacttatttttactcaaccgcatgttttggtttggtttgcggtttttattttagcaactgaaccaaacag 28072742  T
Q  209 caacataagataaacattaattagacatatgtcaca 244  Q
    ||||||||||||||||||||||| |  |||||||||    
T  28072743 caacataagataaacattaattaaatttatgtcaca 28072778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 143 - 304
Target Start/End: Complemental strand, 41346446 - 41346284
Alignment:
Q  143 ttttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacat---aagataaacattaattagacatatg 239  Q
    |||| ||| ||||||||||| ||| |||  |||||||||||||  |||| ||||| ||| |||| |||||||   || | ||||| | |||| |||| ||    
T  41346446 tttttttaatcaaccgtatggttttgtttggtttgcagttttt--tttaacaaccgaaccaaaccgcaacatgaaaaaaaaaacactgattaaacatgtg 41346349  T
Q  240 tcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||   |||||||||||||||||||||||||| || ||||||||| ||||||  |||||||||||    
T  41346348 tcatcaagaccaatactcatagaaactcaatggaagcttttataacatgacatgttttttctctt 41346284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 15452311 - 15452392
Alignment:
Q  240 tcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||| ||||||||||||||||||||||||||| | |||||||| |||||||| ||||||| || ||||||| | |||||||||    
T  15452311 tcacgtagaccaatactcatagaaactcaatggagacttttattaaatgacatattttttttc-ttgttaaatttcttctttg 15452392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 445 - 526
Target Start/End: Complemental strand, 33566178 - 33566097
Alignment:
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||| ||||| ||||||| |||||  ||| | ||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  33566178 acatagttggatgaaaataaaattataatgttggatgaaatttaaaacattactgaaaatatgttgtgttttagctttttaa 33566097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 44024628 - 44024549
Alignment:
Q  226 taattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctcttt 305  Q
    |||||| | |||| |||||||||| |||||||||| ||| |||||| ||||||| | ||||||||| |||||||||||||    
T  44024628 taattaaatatatatcacatagactaatactcatataaattcaatggaaactttaacaaaatgacatattttttctcttt 44024549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 44337187 - 44337105
Alignment:
Q  239 gtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttttt-ctctttgttaagtatcttcttt 321  Q
    ||||| |||||  |||||| |||||||||||| ||||||||||||||||||||| |||||| ||| ||||||||| ||||||||    
T  44337187 gtcacctagacagatactcgtagaaactcaatcaaaacttttataaaatgacaatttttttactc-ttgttaagtttcttcttt 44337105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 12070921 - 12070989
Alignment:
Q  236 tatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||||||| |||||||||||||||||||||| ||| || ||||||| |||||| || || |||||||||    
T  12070921 tatgtcacctagaccaatactcatagaaacttaattaatacttttacaaaatggcatatattttctctt 12070989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 22810806 - 22810894
Alignment:
Q  213 ataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttct 301  Q
    |||||| ||||| |||||| | |||| |||  ||||||||||||||||||||||||| | ||| ||| |||||||||||  ||||||||    
T  22810806 ataagaaaaacactaattaaatatatatcatctagaccaatactcatagaaactcaacggaaattttaataaaatgacattttttttct 22810894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 28441793 - 28441729
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattacttttt 409  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||   |||| |||||||||||    
T  28441793 ttgaacttttagataatgataaaattttagtcttttgcatttcttaaaaaatacgattacttttt 28441729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 11219389 - 11219314
Alignment:
Q  245 tagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctt 320  Q
    |||| |||||||| || ||| |||||||||||||| ||||||||||| |||||||   |||||||||| |||||||    
T  11219389 tagatcaatactcttataaattcaatgaaaactttaataaaatgacatatttttttcttttgttaagtttcttctt 11219314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 515
Target Start/End: Complemental strand, 11017204 - 11017166
Alignment:
Q  477 ggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  11017204 ggatgaaatttaaaacattgctgaaaatatgttgtgttt 11017166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 11219545 - 11219447
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaac 206  Q
    ||||||| |||||||||||  ||||||| |||| ||||| ||| |||| |  ||| |||||||| |||||| ||||| |||||||||||| ||| ||||    
T  11219545 aaaaaacagcatttggttcggatgtattcggatcatttttttactcaatcacatggtttggttcggtttgcggttttgattttaccaaccgaaccaaac 11219447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 24681705 - 24681814
Alignment:
Q  213 ataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca-aattttttctctttgttaag 311  Q
    |||||| ||||| |||||| | |||| |||  |||| ||||| | ||| |||||||||| ||||||| ||||||||||| | ||||||||| ||||||||    
T  24681705 ataagaaaaacactaattaaatatatatcatctagatcaataattataaaaactcaatggaaactttaataaaatgacatatttttttctc-ttgttaag 24681803  T
Q  312 tatcttctttg 322  Q
    | |||||||||    
T  24681804 tttcttctttg 24681814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 515
Target Start/End: Original strand, 36340604 - 36340674
Alignment:
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||| | ||||||| |||| | ||| | |||||||||||||||||||||||||| ||| ||||||||    
T  36340604 acattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaatatattgtgttt 36340674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 412
Target Start/End: Original strand, 12073970 - 12074043
Alignment:
Q  339 ttctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||| ||||||||| |||||| ||||||||||||||||||  ||||||||||  |||   |||||||||||||    
T  12073970 ttctacttgaactttaagagaatgataaaatcttagtctttcacatttcttacaaaatgaaattactttttgtc 12074043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 11219279 - 11219095
Alignment:
Q  345 ttgaacttttagagaaagat-aaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||||| |||||||| ||| ||||| |||||||| || |||||||||  |||| |||||||||||||||   | |||||||||| |||  || ||||      
T  11219279 ttgaactcttagagaatgattaaaattttagtcttgtgtatttcttacaaaataggattactttttgtctacgt-tttaatttgg-tctgcgtagttgag 11219182  T
Q  444 aacattgttggttgaaaatga---aattgaaatatgggatgaaatttaaaacattgctg-aaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||  || |||| |   ||||  ||| | ||||||||||||||||||||||| ||| ||||||| |||| ||||||||||    
T  11219181 aacattgttgtatggaaataataaaattttaatgttggatgaaatttaaaacattgctgaaaaatatgttgcgttttagctttttaa 11219095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 18754978 - 18755049
Alignment:
Q  249 ccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    |||||| |||||||||||||||  ||||||||||||||||  |  ||||||||| ||||||||| ||||||||    
T  18754978 ccaatattcatagaaactcaatagaaacttttataaaatggaattttttttctc-ttgttaagtttcttcttt 18755049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 31477849 - 31477901
Alignment:
Q  252 atactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||||||||||||||||||| ||||||||| ||||| ||| | ||||||||||    
T  31477849 atactcatagaaactcaatggaaacttttacaaaattacatactttttctctt 31477901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 383
Target Start/End: Complemental strand, 28801894 - 28801856
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgca 383  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  28801894 ttgaacttttagagaatgataaaaccttagtcttttgca 28801856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 526
Target Start/End: Original strand, 37162541 - 37162587
Alignment:
Q  480 tgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||||||||||||||| ||| |||||||| | ||||||||    
T  37162541 tgaaatttaaaacattgctgaaaatatattgtgttttaactttttaa 37162587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Original strand, 29914356 - 29914401
Alignment:
Q  347 gaacttttagagaaagataaaatcttagtcttttgcatttcttacc 392  Q
    |||||||||||||| |||||||| |||||| |||| ||||||||||    
T  29914356 gaacttttagagaatgataaaattttagtcatttgtatttcttacc 29914401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 45366928 - 45366807
Alignment:
Q  110 aaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgc 209  Q
    ||||| |||||||||||  ||||||| || | ||||| ||| |||||   ||  |||||||| |||||   ||||||||||| |||||||||||||| ||    
T  45366928 aaaaccgcatttggttcggatgtattcgggtcatttttttactcaacaacatagtttggttcggtttgtgatttttattttaacaaccaaactaaaccgc 45366829  T
Q  210 aacataagataaacattaatta 231  Q
      ||||||| ||||| ||||||    
T  45366828 ggcataagagaaacactaatta 45366807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 412
Target Start/End: Complemental strand, 1271438 - 1271398
Alignment:
Q  372 tagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    |||||||||| |||||||||  |||||||||||||||||||    
T  1271438 tagtcttttgtatttcttacaaaatatgattactttttgtc 1271398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 3129267 - 3129347
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaa 274  Q
    |||||||| |||| | || |||||| |||||||||||| |  |||| ||| |||||||||||| ||| ||| |||||||||    
T  3129267 aaccaaaccaaaccgtaatataagaaaaacattaattaaatctatgccacctagaccaatactaatataaattcaatgaaa 3129347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 526
Target Start/End: Original strand, 18755197 - 18755265
Alignment:
Q  458 aaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||||||| ||| |  |||||||||||||| |||  ||||| |||||||||||| | ||||||||    
T  18755197 aaaatgaaattgtaatgtttgatgaaatttaaaatatttttgaaaatatgttgtgttttaactttttaa 18755265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 31477674 - 31477814
Alignment:
Q  67 aatagaaaaactgtaaactgaactaacctaa-ctaaagctgtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatt 165  Q
    ||||||||||| | ||| | |||||||| || ||||| | | ||||||| |||||||||||   |||| | |||| ||||||||  ||||||  ||| ||    
T  31477674 aatagaaaaacggcaaattaaactaacccaaactaaaaccgcaaaaaaccgcatttggttcgggtgtaatcggatcattttcttgctcaaccacatggtt 31477773  T
Q  166 tggttcagtttgcagtttttattttaccaaccaaactaaac 206  Q
    |||||  |||||| ||||| |||||||||||| ||| ||||    
T  31477774 tggtttggtttgcggttttcattttaccaaccgaaccaaac 31477814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 387
Target Start/End: Original strand, 32063900 - 32063940
Alignment:
Q  347 gaacttttagagaaagataaaatcttagtcttttgcatttc 387  Q
    ||||||||| |||| ||||||||||||||||||| ||||||    
T  32063900 gaacttttaaagaatgataaaatcttagtcttttacatttc 32063940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 108 - 321
Target Start/End: Complemental strand, 23418538 - 23418326
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    ||||||||| |||||||||  || |||| |||| ||||| ||| |||||||  || |||||||| |||||  |||||||||||||| ||| ||| ||||     
T  23418538 aaaaaactgtatttggttcggatatattcggatcattttattactcaaccgcgtggtttggttcggtttgaggtttttattttaccgaccgaaccaaacc 23418439  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgt 307  Q
    ||||||||||| ||||||||||||   ||||||||| |||||||| ||||||||||||  |||| |||||| |||||| ||||| |||||||||| ||||    
T  23418438 gcaacataagaaaaacattaattaatgatatgtcacctagaccaacactcatagaaacaaaatgcaaacttctataaactgacatattttttctc-ttgt 23418340  T
Q  308 taagtatcttcttt 321  Q
    ||||| ||||||||    
T  23418339 taagtttcttcttt 23418326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 194 - 321
Target Start/End: Complemental strand, 22553841 - 22553715
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| ||||||||||| ||||| |||||| |||||| |||| |||| ||||||||||||||||||||| ||||||| |||||||||||| |    
T  22553841 aaccaaaccaaaccgcaacataagaaaaacactaattaaacatatctcacctagatcaatactcatagaaactcaattaaaacttctataaaatgacata 22553742  T
Q  294 ttttttctctttgttaagtatcttcttt 321  Q
    ||||||||| ||||||||| ||||||||    
T  22553741 ttttttctc-ttgttaagtttcttcttt 22553715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 4414799 - 4414609
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaac---------ca 198  Q
    |||||| ||||||||||||| |||||||   || ||||| ||| ||||||||||| |||| ||  |||||  ||||||||||||| |||         ||    
T  4414799 aaaaaattgcatttggttcagatgtattcatatcatttttttactcaaccgtatggtttgatttggtttgttgtttttattttacgaactgaacaaacca 4414700  T
Q  199 aactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatga 289  Q
    ||| ||||| |||||||||| |||||||||||| |||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  4414699 aaccaaactacaacataagaaaaacattaattaaacatatgtcatataaaccaatacttatagaaactcaatgaaaacttttataaaatga 4414609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 38147595 - 38147485
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| ||||  |||||||||| ||||| |||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | |    
T  38147595 aaccaaaccaaaccccaacataagaaaaacactaattaaacatgtgtcacatagaccaatattcatagaaactcaatgaaaacttttataaaatgatata 38147496  T
Q  294 ttttttctctt 304  Q
    |||||||||||    
T  38147495 ttttttctctt 38147485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 11402921 - 11402742
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||| |||| ||||| ||||||||||||||||||| | ||||||||  ||||||||||  |||||||  | | ||||| |||| |||||||||||| ||    
T  11402921 ttgaaatttttgagaatgataaaatcttagtcttttacttttcttacaaaatatgattatgttttgtccatgtttttaacttgg-tctatgttgttggaa 11402823  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
     ||||||    |||||||||||||| |||||  |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  11402822 -cattgtaaaatgaaaatgaaattgtaatatttgatggaatttaaaacattgctgaaaatatgttgtgtttcagctttttaa 11402742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 107 - 321
Target Start/End: Original strand, 42920546 - 42920763
Alignment:
Q  107 taaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaac----caaact 202  Q
    |||||||  ||||||| ||  |||||||||| || | ||| | | |||| || ||| |||||||  |||||| ||||||||||||| | |    |||||     
T  42920546 taaaaaatcgcatttgatttgaatgtatttgaatcactttttgactcaagcgcatggtttggtttggtttgcggtttttattttacgatcgaatcaaacc 42920645  T
Q  203 aaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctc 302  Q
    |||||||||||||||| |||| ||||||| | ||||||||  |||| || |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  42920646 aaactgcaacataagaaaaactttaattaaatatatgtcatctagatcactactcatagaaactcaattaaaacttttataaaatgacatattttttctc 42920745  T
Q  303 tttgttaagtatcttcttt 321  Q
     ||||||||| ||||||||    
T  42920746 -ttgttaagtttcttcttt 42920763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 14652782 - 14652604
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||| |||||||||| |||||||||||| ||||||| |||||||||  |||| |||||| | |||||  | | ||||| |||| |||||||||||  ||    
T  14652782 ttgaaattttagagaatgataaaatcttaatcttttgaatttcttacaaaataggattacatattgtccatgtttttaagttgg-tctatgttgttcgaa 14652684  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagcttttt 524  Q
    |||||||    ||||||| |||||| |||||  ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  14652683 acattgtaaaatgaaaataaaattgtaatatttgatgaaatttaaaacattgctgaaaatatgttgtgtttaagcttttt 14652604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 143 - 291
Target Start/End: Complemental strand, 35727504 - 35727358
Alignment:
Q  143 ttttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtca 242  Q
    |||||||| ||||||  ||||||||||||||||||| |||||| ||||| ||||||||  |||| |||||||| || |||||  ||||| ||||  ||||    
T  35727504 ttttcttactcaaccacatgatttggttcagtttgcggtttttgttttatcaaccaaatcaaaccgcaacatacgaaaaacacaaattaaacat--gtca 35727407  T
Q  243 catagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||| ||||||| ||||||||||||||||  ||||||||||||||||||    
T  35727406 catataccaatattcatagaaactcaatggtaacttttataaaatgaca 35727358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 11403095 - 11402971
Alignment:
Q  180 gtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttt 279  Q
    |||||||||||||||||| ||| |||| ||||||||||| |||  ||||||| |||||| |||| |||||| ||||||||| ||| |||||| ||||||     
T  11403095 gtttttattttaccaaccgaaccaaaccgcaacataagaaaaatgttaattaaacatatctcacctagaccgatactcatataaattcaatggaaacttg 11402996  T
Q  280 tataaaatgacaaattttttctctt 304  Q
    |||||||||||| ||||||||||||    
T  11402995 tataaaatgacatattttttctctt 11402971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 106 - 321
Target Start/End: Original strand, 2802493 - 2802709
Alignment:
Q  106 gtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaa 205  Q
    |||||||||  ||||| |||  |||||||| |||| | ||| ||| | ||||| ||| |||| |||||||||  |||||||||||||||||||||  |||    
T  2802493 gtaaaaaacaacattttgtttgaatgtattcggatcacttttttacttaaccgcatggtttgtttcagtttgtggtttttattttaccaaccaaatcaaa 2802592  T
Q  206 ctgcaacataagataaacattaattagacatat--gtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct 303  Q
    |  |||||||||| ||||| |||||  || |||  ||||  |||||||||||||||| |||||||| ||||||||| ||||||||||  ||||||||||     
T  2802593 ccacaacataagaaaaacactaatttaacctataagtcatctagaccaatactcataaaaactcaacgaaaactttgataaaatgacgtattttttctc- 2802691  T
Q  304 ttgttaagtatcttcttt 321  Q
    ||||||| | ||||||||    
T  2802692 ttgttaaatttcttcttt 2802709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 142 - 312
Target Start/End: Original strand, 8541865 - 8542044
Alignment:
Q  142 attttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaac----------caaactaaactgcaacataagataaacattaatta 231  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||||| | ||||          ||||  |||||||||||||||| ||| ||||||||    
T  8541865 attttctaattcaaccgcatgatttggttcagtttgcggtttttatttcatcaactgaaccaaatcaaatgaaactgcaacataaga-aaatattaatta 8541963  T
Q  232 gacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct-ttgttaagt 312  Q
     |||||||  ||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||| |||||||||    
T  8541964 aacatatgctacatagatcaagactcatagaaactcaatgaaaac-tttataaaatgacatattttttttctcttgttaagt 8542044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 41805397 - 41805549
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaaca-taagataaacattaattagacatatgtcacatagaccaatactcataga 262  Q
    |||||||  |||||| |||||||||||| |||||||||      |||||| ||||| | ||||||||||  |||||||||| |||||||||||| |||||    
T  41805397 tttggtttggtttgcggtttttattttatcaaccaaacc-----gcaacaataagaaagacattaattaagcatatgtcacctagaccaatacttataga 41805491  T
Q  263 aactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    ||||||||| ||||||||||||||||||| |||||||||| ||| ||||| ||||||||    
T  41805492 aactcaatggaaacttttataaaatgacacattttttctc-ttgataagtttcttcttt 41805549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 6633783 - 6633680
Alignment:
Q  198 aaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttt 297  Q
    |||| |||| |||| |||||| |||| ||||||| |  |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6633783 aaaccaaaccgcaatataagaaaaactttaattaaatctatgtcacgtggaccaatactcatagaaactcaatgaaaacttttataaaatgacatatttt 6633684  T
Q  298 ttct 301  Q
    ||||    
T  6633683 ttct 6633680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 412
Target Start/End: Original strand, 34111368 - 34111595
Alignment:
Q  181 tttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaactttt 280  Q
    ||||||||||||||||||||| |||| ||||||||||| ||| |||||||| |||||| |||| || || |||||||||  |||||||||| | ||||||    
T  34111368 tttttattttaccaaccaaaccaaaccgcaacataaga-aaaaattaattaaacatatatcacctaaactaatactcat-taaactcaatggacactttt 34111465  T
Q  281 ataaaatgacaaattttttctctttgttaagtatcttctttgnnnnnnnctcattaaa--ttctatttgaacttttagagaaagataaaatcttagtctt 378  Q
    |||||||||| | |||||||   ||||||||| |||||||||        |    |||  |  || |||||||||||||||| ||||||||||| |||||    
T  34111466 ataaaatgac-atttttttc---ttgttaagtttcttctttgctttttatttcaaaaatgtaatacttgaacttttagagaaggataaaatctttgtctt 34111561  T
Q  379 ttgcatttcttaccgaatatgattactttttgtc 412  Q
    || ||||||||||  |||||||||||||||||||    
T  34111562 ttacatttcttacataatatgattactttttgtc 34111595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 36568039 - 36567859
Alignment:
Q  345 ttgaacttttagagaaagataaaatctt-agtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||||| |||||||| |||||||| || ||||||||| |||||||||  ||||||||||||||| ||||   |  |||| || |||||| || ||||      
T  36568039 ttgaactcttagagaatgataaaatatttagtcttttgtatttcttacaaaatatgattacttttggtctgcgt--ttaaatttggtctacgtagttggg 36567942  T
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||| ||||||| |||||| ||||  | |||||||||| || |||||||||| |||||||||||| ||||||||||    
T  36567941 aacattgttggatgaaaataaaattgtaataatgtatgaaatttagaaaattgctgaaaatatgttgtgttttagctttttaa 36567859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 345 - 526
Target Start/End: Original strand, 34881079 - 34881259
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatg-ttgttgta 443  Q
    ||||| |||||||||| |||||||||||||| |||||||||||||||  |||| ||||||||||||||   || |||||||| | | |||| ||||||      
T  34881079 ttgaatttttagagaatgataaaatcttagttttttgcatttcttacaaaatacgattactttttgtccacatttttaattt-gttatatgtttgttggg 34881177  T
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||| ||||| ||||||| |||||  ||| | |||||||||||||||||||| ||||| || ||||||||| || |||||||    
T  34881178 aacatcgttggatgaaaataaaattttaatgttggatgaaatttaaaacattgttgaaa-tacgttgtgttttagatttttaa 34881259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 322
Target Start/End: Original strand, 28224355 - 28224587
Alignment:
Q  96 aactaaagctgtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttacc-- 193  Q
    ||||||| ||| ||||||||| |||||||||| ||||||| |||| ||||| ||| ||||| | ||  |||||||  |||||| ||||| ||||||||      
T  28224355 aactaaaactgcaaaaaactgtatttggttcagatgtattcggatcatttttttactcaactgcatagtttggtttggtttgcggttttgattttaccaa 28224454  T
Q  194 ---aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaa-tgaaaacttttataaaatga 289  Q
       |||||||| ||||||||| |||||| || || |||||| | |||| |||  |||| ||||| ||||||||| |||| | |||| ||| |||||||||    
T  28224455 ccgaaccaaaccaaactgcaatataagaaaaccactaattaaatatatatcatctagatcaataatcatagaaattcaattcaaaattttaataaaatga 28224554  T
Q  290 caaattttttctctttgttaagtatcttctttg 322  Q
    || |||||||   |||||||||| |||||||||    
T  28224555 catatttttttcttttgttaagtttcttctttg 28224587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 197 - 300
Target Start/End: Complemental strand, 18432570 - 18432467
Alignment:
Q  197 caaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattt 296  Q
    ||||| |||| ||||||||| | ||||||||||||    |||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  18432570 caaaccaaaccgcaacataaaaaaaacattaattaagtctatgtcacctataccaatactcatagaaaatcaatgaaaacttttataaaatgacatattt 18432471  T
Q  297 tttc 300  Q
    ||||    
T  18432470 tttc 18432467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 108 - 291
Target Start/End: Complemental strand, 33793206 - 33793023
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    ||||||| |||||||||||  |||||||  ||| ||||| ||| |||||||| || |||| ||  |||||| ||||| |||||| ||||||||| |||||    
T  33793206 aaaaaaccgcatttggttcggatgtattcagatcatttttttactcaaccgtgtggtttgatttggtttgcggttttgattttatcaaccaaaccaaact 33793107  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||| |||||| ||||| |||||| | |||| | |  ||||| ||| || ||||||| |||||||||| ||| |||||||||||    
T  33793106 gcaatataagaaaaacactaattaaatatatattatttagactaatgcttatagaaattcaatgaaaattttaataaaatgaca 33793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 443 - 526
Target Start/End: Complemental strand, 41455100 - 41455017
Alignment:
Q  443 aaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||||||| ||||||| |||||||||| | |||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  41455100 aaacattgttggatgaaaataaaattgaaatgttggatgaaatttaaaacattgatgaaaatatgttgtgttttagctttttaa 41455017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 321
Target Start/End: Original strand, 2796332 - 2796548
Alignment:
Q  106 gtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaa 205  Q
    |||||||||  ||||| |||  |||||||| |||| | ||| ||| | ||||| ||| |||| |||||||||  |||||||||||||||||||||  |||    
T  2796332 gtaaaaaacaacattttgtttgaatgtattcggatcacttttttacttaaccgcatggtttgtttcagtttgtggtttttattttaccaaccaaatcaaa 2796431  T
Q  206 ctgcaacataagataaacattaattagac--atatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct 303  Q
    |  |||||||||| ||||| |||||  ||  ||| ||||  ||||| |||||||||| |||||||| | ||||||| ||||||||||  ||||||||||     
T  2796432 ccacaacataagaaaaacactaatttaacctataagtcatctagactaatactcataaaaactcaacggaaactttgataaaatgacgtattttttctc- 2796530  T
Q  304 ttgttaagtatcttcttt 321  Q
    ||||||| | ||||||||    
T  2796531 ttgttaaatttcttcttt 2796548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 180 - 321
Target Start/End: Complemental strand, 39053054 - 39052914
Alignment:
Q  180 gtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttt 279  Q
    |||| ||||||||||||||||| ||||  ||| |||| ||||||| |  ||| ||||||||||  || ||||||||||||||||||||| ||||||||||    
T  39053054 gtttatattttaccaaccaaaccaaacaacaatataaaataaacaatccttatacatatgtcatttaaaccaatactcatagaaactcagtgaaaacttt 39052955  T
Q  280 tataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    |||||||| | | |||| ||||| ||||||| | ||||||||    
T  39052954 tataaaattatatatttgttctc-ttgttaaatttcttcttt 39052914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 40692980 - 40692857
Alignment:
Q  142 attttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtc 241  Q
    ||||| ||| |||||| |||| ||||||| ||||| | |||||||||||||||||||||| |||| || |||||||| ||||| |||||| |||||||||    
T  40692980 atttttttactcaaccttatggtttggtttagtttacggtttttattttaccaaccaaaccaaaccgc-acataagaaaaacactaattaaacatatgtc 40692882  T
Q  242 acatagaccaatactcatagaaact 266  Q
    || ||||| |||||| || ||||||    
T  40692881 acctagacaaatacttatggaaact 40692857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 41455343 - 41455247
Alignment:
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||| |||||| ||||| |||||| | |||| |||| | ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  41455343 gcaatataagaaaaacactaattaaatatatatcacttggaccaatactcatagaaactcaatggaaactttaataaaatgacatattttttctctt 41455247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 2423292 - 2423183
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| ||||||||||| |||||||||||| |  |||||||| ||||| |||||||||| |||||||||  |||||||||| |||||||| |    
T  2423292 aaccaaaccaaaccgcaacataagaaaaacattaattaaatctatgtcacctagacaaatactcataaaaactcaatagaaacttttat-aaatgacata 2423194  T
Q  294 ttttttctctt 304  Q
    | |||||||||    
T  2423193 tattttctctt 2423183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 129 - 298
Target Start/End: Complemental strand, 19402792 - 19402614
Alignment:
Q  129 atgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaact---------aaactgcaacataagat 219  Q
    ||||||||||| |||||| ||| ||||||| | | |||||||  |||||| |||||||||||||||||||||||         |||| |||| ||||||     
T  19402792 atgtatttggacaatttttttactcaaccgcacggtttggttatgtttgcggtttttattttaccaaccaaactaaacacaccaaaccgcaatataagag 19402693  T
Q  220 aaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttt 298  Q
    ||| |||||||| || ||||||||  |  |||||||||||||||||||||||| || |||||||  |||||| ||||||    
T  19402692 aaatattaattaaacttatgtcactcaacccaatactcatagaaactcaatgagaatttttataggatgacatattttt 19402614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 312
Target Start/End: Complemental strand, 2589522 - 2589362
Alignment:
Q  155 accgtatgatttggttcagtttgcagtttttattttaccaaccaaact-----aaactgcaacataagataaacattaattagacatatgtcacatagac 249  Q
    |||| ||| |||||||| |||| |||||||||||||||||||  |||      |||| ||||||||||| ||||| |||||| | ||||||||  ||  |    
T  2589522 accgcatggtttggttcggtttccagtttttattttaccaactgaaccgaatcaaaccgcaacataagaaaaacactaattaaatatatgtcatctacgc 2589423  T
Q  250 caatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagt 312  Q
    ||||||||||||||||| |||| |||||||||| |||||||| || |||||| ||||||||||    
T  2589422 caatactcatagaaactaaatggaaacttttat-aaatgacatatattttct-tttgttaagt 2589362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 25495414 - 25495234
Alignment:
Q  345 ttgaacttttagagaaagat-aaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||||| |||||||| ||| ||||| ||||||||||| |||||||||  |||| ||||||||||||||    | |||||||||| |||| || |||       
T  25495414 ttgaactcttagagaatgattaaaattttagtcttttgtatttcttacaaaataagattactttttgtccacgt-tttaatttgg-tctacgtagttcgg 25495317  T
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||| ||||||| |||||  ||| |  ||||| ||||||||||||| ||||| |||||||||||| | ||||||||    
T  25495316 aacattgttggatgaaaataaaattataatgtttgatgatatttaaaacattgttgaaaatatgttgtgttttacctttttaa 25495234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 194 - 298
Target Start/End: Original strand, 34880919 - 34881023
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttat-aaaatgacaa 292  Q
    |||||||  |||| ||||||||||| |||||||||||| | ||||| ||| || ||||||||||||| |||||||||| |||||||||| |||||||||     
T  34880919 aaccaaatcaaaccgcaacataagaaaaacattaattaaatatatgccacttaaaccaatactcata-aaactcaatggaaacttttataaaaatgacat 34881017  T
Q  293 attttt 298  Q
    ||||||    
T  34881018 attttt 34881023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 39730737 - 39730641
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    ||||||||  ||||||||||||||| |||  | ||||| |||||| |||| |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  39730737 aaccaaaccgaactgcaacataagaaaaatgt-aattaaacatatctcacctagaccaatacttataaaaactcaatgaaaagttttataaaatgaca 39730641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 496
Target Start/End: Original strand, 40331241 - 40331390
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    |||||||||||||||| |||||||||||||||||||||||||||||   |||| ||||| ||||| ||   || ||| |||| |||| ||||||||  ||    
T  40331241 ttgaacttttagagaatgataaaatcttagtcttttgcatttcttaaaaaataagattattttttatccacattttttattt-ggtc-atgttgttagaa 40331338  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattg 496  Q
    | ||| |||| |||||||||||||  || || ||| | ||||||||||||||    
T  40331339 atattattggatgaaaatgaaattataacattggaaggaatttaaaacattg 40331390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 40692780 - 40692714
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgt 411  Q
    |||||||||||| ||| | |||||||||||||||||| |||||||||  ||||||||||||||||||    
T  40692780 ttgaacttttagtgaatgttaaaatcttagtcttttgtatttcttacaaaatatgattactttttgt 40692714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 319
Target Start/End: Complemental strand, 25495673 - 25495450
Alignment:
Q  106 gtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc-------- 197  Q
    ||||||||| ||||||| |||| || ||||  ||| ||||| ||| ||||||| ||| ||||||||| ||||| ||||| ||||||||||||            
T  25495673 gtaaaaaaccgcatttgattcagatatattcagatcatttttttactcaaccgcatggtttggttca-tttgcggttttaattttaccaaccgaaccaaa 25495575  T
Q  198 --aaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatt 295  Q
      ||||||||| |||| |||||| ||| | |||||| | || | |||  |||||||||||||||| ||  |||||| ||||||| |||||||||||  ||    
T  25495574 ccaaactaaaccgcaatataagaaaaaaactaattaaatatgtatcatctagaccaatactcatataagttcaatggaaactttaataaaatgacatttt 25495475  T
Q  296 ttttctct-ttgttaagtatcttct 319  Q
    |||| ||| ||||||||| ||||||    
T  25495474 ttttttctcttgttaagtttcttct 25495450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 496
Target Start/End: Original strand, 31075440 - 31075516
Alignment:
Q  419 tttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattg 496  Q
    |||||||||| ||||||||||||  ||||||||| | ||||||| |||||| ||||| ||||||||||||||||||||    
T  31075440 tttaatttgg-tctatgttgttgggaacattgttagatgaaaataaaattgtaatattggatgaaatttaaaacattg 31075516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 320
Target Start/End: Complemental strand, 36568145 - 36568073
Alignment:
Q  247 gaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctt 320  Q
    |||||||||||||| |||||||||| ||||||| ||| ||||||| |||||||||| ||||||||| |||||||    
T  36568145 gaccaatactcataaaaactcaatggaaactttgatacaatgacatattttttctc-ttgttaagtgtcttctt 36568073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 441
Target Start/End: Original strand, 7487075 - 7487170
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttg 441  Q
    ||||||||||||| || |||||||||||| |||| | |||||||||  ||||||||||| |||||||||   | |||||||| ||||||||||||||    
T  7487075 ttgaacttttagaaaatgataaaatcttaatcttatacatttcttagagaatatgattaatttttgtctacgtttttaattt-ggtctatgttgttg 7487170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 291
Target Start/End: Original strand, 5175152 - 5175326
Alignment:
Q  116 gcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacata 215  Q
    |||||||||||  |||||||||||| ||||| ||| ||||||   || |||||||  |||||  ||||| |||||||||||||||| |||| |||| |||    
T  5175152 gcatttggttcggatgtatttggatcatttttttactcaaccacgtggtttggtttggtttgt-gttttgattttaccaaccaaaccaaaccgcaatata 5175250  T
Q  216 agataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    | | ||||| | |||| | |||| | | |||||| ||| || ||| ||| |||||||||| ||| |||||||||||    
T  5175251 aaaaaaacactgattaaatatatattatatagactaatgcttataaaaattcaatgaaaattttaataaaatgaca 5175326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 496
Target Start/End: Complemental strand, 12264196 - 12264051
Alignment:
Q  350 cttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattacttttt-gtctttatctttaatttgggtctatgttgttgtaaacat 448  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||| |   ||| ||||| |||  | |  ||||||| ||| ||||||| ||  |||||    
T  12264196 cttttagagaatgataaaatcttagtcgtatgcatttcttaccgaa-agagttattttttggtccatgttcttaattt-ggtatatgttgatgagaacat 12264099  T
Q  449 tgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattg 496  Q
    |||||| |||||||||||||| ||| | ||||||||||| ||||||||    
T  12264098 tgttggatgaaaatgaaattgtaattttggatgaaatttgaaacattg 12264051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 10090662 - 10090586
Alignment:
Q  245 tagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||||||||||| ||||| |||| ||||||||| |||||||||||  ||||||||| ||||| ||| |||||||||    
T  10090662 tagaccaatactcagagaaattcaaagaaaactttaataaaatgacatcttttttctc-ttgttgagtttcttctttg 10090586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 266
Target Start/End: Complemental strand, 26690345 - 26690209
Alignment:
Q  129 atgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaa 228  Q
    |||||||| ||| | ||| ||| ||||||| ||| |||||||||||||||||||||||||| || | | || | ||||  |||||||||| |||  ||||    
T  26690345 atgtatttagatcacttttttactcaaccgcatggtttggttcagtttgcagtttttatttaacaatcgaaccaaaaca-caacataagaaaaatgttaa 26690247  T
Q  229 ttagacatatgtcacatagaccaatactcatagaaact 266  Q
    ||  || |||||||||||   |||||||||||||||||    
T  26690246 ttgaacctatgtcacataactcaatactcatagaaact 26690209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 266
Target Start/End: Complemental strand, 26960077 - 26959941
Alignment:
Q  129 atgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaa 228  Q
    |||||||| ||| | ||| ||| ||||||| ||| |||||||||||||||||||||||||| || | | || | ||||  |||||||||| |||  ||||    
T  26960077 atgtatttagatcacttttttactcaaccgcatggtttggttcagtttgcagtttttatttaacaatcgaaccaaaaca-caacataagaaaaatgttaa 26959979  T
Q  229 ttagacatatgtcacatagaccaatactcatagaaact 266  Q
    ||  || |||||||||||   |||||||||||||||||    
T  26959978 ttgaacctatgtcacataactcaatactcatagaaact 26959941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 34087877 - 34087817
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaaca 224  Q
    |||||||| |||||||||||| |||||||||||||||| |||| |||| |||||| |||||    
T  34087877 tttggttcggtttgcagttttgattttaccaaccaaaccaaaccgcaatataagaaaaaca 34087817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 526
Target Start/End: Complemental strand, 6595292 - 6595130
Alignment:
Q  364 taaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatg 463  Q
    ||||||| |||||||||||||||||||   |||| |||||| |||| ||  | | ||||  |||| |||| ||||||| |||||||||    |||||||     
T  6595292 taaaatcctagtcttttgcatttcttagaaaataggattacgttttttcgatgtttttaccttgg-tctacgttgttggaaacattgtaaaatgaaaata 6595194  T
Q  464 aaattgaaatatgggatgaaatttaaaacattgctg-aaattatgttgtgtttcagctttttaa 526  Q
    |||||| |||||   ||||||||||||||||| ||| ||| |||||||||||| | ||||||||    
T  6595193 aaattgtaatatttaatgaaatttaaaacattactgaaaaatatgttgtgttttaactttttaa 6595130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 18432413 - 18432346
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    |||||||||||||||| |||||| ||||||||||||  |||||||||  ||||  |||||||||||||    
T  18432413 ttgaacttttagagaatgataaagtcttagtcttttatatttcttacataatagaattactttttgtc 18432346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 412
Target Start/End: Original strand, 38176235 - 38176306
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||||||| ||||| ||||||||||||| ||| |||||| ||||| ||||  |||| ||||||||||||||    
T  38176235 ctatttgaaattttatagaaagataaaatattactcttttacattttttacataataggattactttttgtc 38176306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 412
Target Start/End: Original strand, 38203459 - 38203530
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||||||| ||||| ||||||||||||| ||| |||||| ||||| ||||  |||| ||||||||||||||    
T  38203459 ctatttgaaattttatagaaagataaaatattactcttttacattttttacataataggattactttttgtc 38203530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 515
Target Start/End: Original strand, 17131934 - 17132004
Alignment:
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||| | ||||||| |||| | ||| | |||||||||||||||||||||||||| ||| ||||||||    
T  17131934 acattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaatatattgtgttt 17132004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 481 - 526
Target Start/End: Complemental strand, 33792861 - 33792816
Alignment:
Q  481 gaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||    
T  33792861 gaaatttaaaacattgctgaaaatatgttgtgttttacctttttaa 33792816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 15216549 - 15216668
Alignment:
Q  111 aaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgca 210  Q
    ||||||||||||||||  ||||||| |||| ||||| ||| |||||| | || || ||||| |||||| | |||||| ||| || |||||| |||  |||    
T  15216549 aaactgcatttggttcggatgtattcggatcatttttttactcaaccatgtggttcggttcggtttgc-ggttttatgttagcagccaaacaaaatcgca 15216647  T
Q  211 acataagataaacattaatta 231  Q
    |||||||| ||||| ||||||    
T  15216648 acataagagaaacactaatta 15216668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 23623486 - 23623410
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaat 270  Q
    |||||||| |||| ||||||||||| |    ||||||| | | ||||||| ||||||||||||||||||||||||||    
T  23623486 aaccaaaccaaaccgcaacataagaaattttttaattaaatacatgtcacctagaccaatactcatagaaactcaat 23623410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 1681725 - 1681662
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacata 215  Q
    ||||||||||| |||| || |||||||||||||||||||| ||||  ||| |||| ||||||||    
T  1681725 tcaaccgtatggtttgatttagtttgcagtttttattttagcaactgaaccaaaccgcaacata 1681662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 2423144 - 2423077
Alignment:
Q  342 tatttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattacttttt 409  Q
    ||||| |||||||||||||  ||||||||||||| || | ||||||||||  ||||| ||||||||||    
T  2423144 tatttaaacttttagagaataataaaatcttagttttctacatttcttacataatataattacttttt 2423077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 14652888 - 14652845
Alignment:
Q  247 gaccaatactcatagaaactcaatgaaaacttttataaaatgac 290  Q
    ||||||| || |||||||| ||||||||||||||||||||||||    
T  14652888 gaccaatgcttatagaaacgcaatgaaaacttttataaaatgac 14652845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 1681437 - 1681395
Alignment:
Q  348 aacttttagagaaagataaaatcttagtcttttgcatttctta 390  Q
    ||||||||||||| |||||||||||||  ||||||||||||||    
T  1681437 aacttttagagaatgataaaatcttagagttttgcatttctta 1681395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 27571817 - 27571863
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttac 391  Q
    ||||||||||||||||  ||||||||||| |||||| ||||||||||    
T  27571817 ttgaacttttagagaataataaaatcttaatcttttacatttcttac 27571863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 515
Target Start/End: Original strand, 32244230 - 32244300
Alignment:
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||| | ||||||| |||| | ||| | ||||||||||||||||||| |||||| ||| ||||||||    
T  32244230 acattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattcctgaaaatatattgtgttt 32244300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 526
Target Start/End: Complemental strand, 34969547 - 34969477
Alignment:
Q  456 tgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||||||||  |||||  |||||||||||||| |||| || || |||||||||||| || |||||||    
T  34969547 tgaaaatgaaattttaatatttgatgaaatttaaaagattgttggaagtatgttgtgttttagttttttaa 34969477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 469
Target Start/End: Complemental strand, 10090550 - 10090431
Alignment:
Q  348 aacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaaca 447  Q
    |||| |||||||| |||  ||| ||||||||||| |||||||||  |||| ||||||||||||||   || |||||||| |||||| || ||||  ||||    
T  10090550 aactcttagagaatgatttaattttagtcttttgtatttcttacaaaataggattactttttgtccaaat-tttaattt-ggtctacgtagttgggaaca 10090453  T
Q  448 ttgttggttgaaaatgaaattg 469  Q
    || |||| ||||||| ||||||    
T  10090452 ttattggatgaaaataaaattg 10090431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 18845843 - 18845774
Alignment:
Q  343 atttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||||||||||| ||||  || ||||||||||||||| ||||||||||  ||||  |||||||| ||||    
T  18845843 atttgaacttttaaagaattatgaaatcttagtcttttacatttcttacaaaatagaattactttatgtc 18845774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 32721020 - 32721132
Alignment:
Q  210 aacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaa-aacttttataaaatgacaaattttttctctttgtt 308  Q
    ||||||||  ||||| |||||| || ||||| || |||||||||||||| | ||| ||||||||    ||||||||||||||| || ||||||| |||||    
T  32721020 aacataagtaaaacactaattaaacctatgttacctagaccaatactcaaataaattcaatgaattttttttataaaatgacatatattttctc-ttgtt 32721118  T
Q  309 aagtatcttctttg 322  Q
    |||| | |||||||    
T  32721119 aagtttattctttg 32721132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 33901511 - 33901592
Alignment:
Q  116 gcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc 197  Q
    |||||||||||  ||||||| | || ||||| | |||||||||  || |||| |||| ||||| ||||||||||||||||||    
T  33901511 gcatttggttcggatgtattcgaattattttttaattcaaccgcgtggtttgattcaatttgcggtttttattttaccaacc 33901592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 469
Target Start/End: Original strand, 40109374 - 40109502
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatctt-agtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgt 439  Q
    ||||||||||||| | |||| ||||||||||| | |||||||||| ||||||  |||||||||||  |||||   ||| ||||| || | | ||||| ||    
T  40109374 ctatttgaactttcatagaatgataaaatcttaaatcttttgcatctcttacaaaatatgattaccctttgttcatat-tttaaatttgatttatgtagt 40109472  T
Q  440 tgtaaacattgttggttgaaaatgaaattg 469  Q
    || ||||||||||||  || ||||||||||    
T  40109473 tggaaacattgttggaagataatgaaattg 40109502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 691254 - 691306
Alignment:
Q  252 atactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||| ||||||||||||||| ||||||||||||||| ||| |  |||||||||    
T  691254 atacacatagaaactcaatggaaacttttataaaattacataccttttctctt 691306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 6595371 - 6595319
Alignment:
Q  252 atactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||||||||||| ||||||  ||||||||||||||| ||| | ||||||||||    
T  6595371 atactcatagaatctcaatagaaacttttataaaattacatactttttctctt 6595319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 12378752 - 12378808
Alignment:
Q  266 tcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||| |||||||||||||||||||  ||||||   |||||||||| |||||||||    
T  12378752 tcaatggaaacttttataaaatgacatttttttttcttttgttaagtttcttctttg 12378808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 12378844 - 12378908
Alignment:
Q  348 aacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    |||||||| |||| |||||||||||||| |||| ||||||||||  ||||  |||| ||||||||    
T  12378844 aacttttaaagaatgataaaatcttagtattttacatttcttacaaaatagaattaatttttgtc 12378908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 44651532 - 44651336
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    ||||||| |||||| |||   ||||| | |||| ||||||||  ||||||| ||| |||||||   ||||  ||||| |||||||||||| ||| ||||     
T  44651532 aaaaaaccgcattttgtttggatgtaatcggatcattttcttgctcaaccgcatggtttggtttgatttgtggttttcattttaccaaccgaaccaaacc 44651433  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    ||||||||||| |||  ||||||| |||||| |||| |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  44651432 gcaacataagaaaaatgttaattaaacatatctcacttagaccaatactcatagaaattcaatggaaacttttataaaatgacatattttttctctt 44651336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 44651286 - 44651107
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||| |||||||||| || |||||||||||||||||||||||||||  |||| |||||| |||||||  ||| |||| ||  ||| |||||||||| ||    
T  44651286 ttgaaattttagagaatgaaaaaatcttagtcttttgcatttcttacaaaataagattacgttttgtccatatttttactt--ggtatatgttgttgaaa 44651189  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||     ||||||||||| | |||||  ||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  44651188 acattgtaaaacgaaaatgaaatcgtaatatttgatgaaatttaaaacattgctgaaaatatgctgtgtttcaactttttaa 44651107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 348 - 525
Target Start/End: Complemental strand, 37045632 - 37045458
Alignment:
Q  348 aacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaaca 447  Q
    ||||||||||||| || || |||| |||||||||||||||||||  |||| ||||||||||||||    | |||||||||| | |||||||||| |||||    
T  37045632 aacttttagagaatgagaacatctcagtcttttgcatttcttacaaaataagattactttttgtccgcgtttttaatttggtt-tatgttgttggaaaca 37045534  T
Q  448 ttgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagcttttta 525  Q
    ||||    |||||||||||||| ||| |  ||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  37045533 ttgtaa--tgaaaatgaaattgtaatgtttgatgaaatttaaaacattgttgaaaatatattgtgtttcagcttttta 37045458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 51660600 - 51660726
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| ||||||||||| |||||| || |  ||| || |||| |||||||||||| |||||||||||||||||||||||||||||||||| |    
T  51660600 aaccaaaccaaaccgcaacataagaaaaacatcaactgaacacatttcacctagaccaatacttatagaaactcaatgaaaacttttataaaatgacata 51660699  T
Q  294 ttttttctctttgttaagtatcttcttt 321  Q
    ||||||||| ||| ||||| ||||||||    
T  51660700 ttttttctc-ttgataagtttcttcttt 51660726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 67 - 300
Target Start/End: Original strand, 17144204 - 17144437
Alignment:
Q  67 aatagaaaaactgtaaactgaactaacctaa-ctaaagctgtaaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatt 165  Q
    ||||||||||| ||||||||||| |||| || |  || | | ||||||| ||||||| |||  ||||||| ||||   ||| ||| |||||| |||| ||    
T  17144204 aatagaaaaaccgtaaactgaaccaacccaaaccgaaaccgcaaaaaaccgcatttgattcggatgtattcggatcccttttttactcaaccatatggtt 17144303  T
Q  166 tggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaac 265  Q
    |||||  |||||| |||||||||||| ||||||||| |||||||||| ||| | |||||||||||| |||||||| || |||| ||||| | | | |||     
T  17144304 tggtttggtttgcggtttttattttatcaaccaaaccaaactgcaacttaa-aaaaacattaattaaacatatgttacctagatcaataataaaaaaaat 17144402  T
Q  266 tcaatgaaaacttttataaaatgacaaattttttc 300  Q
    |||||| ||||||||||||||| ||| ||||||||    
T  17144403 tcaatggaaacttttataaaataacatattttttc 17144437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 8557280 - 8557460
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    ||||||| |||||||||||  ||||| | |||| ||||||||  ||||||| ||| |||||||  |||||   |||| |||||||||||||||| ||||     
T  8557280 aaaaaacagcatttggttcggatgtaataggatcattttcttgctcaaccgcatggtttggtttggtttgtgattttcattttaccaaccaaaccaaacc 8557379  T
Q  208 gcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatga 289  Q
    ||||||||||| |||  || |||| |||||| |||| |||||||||||| |||||||||||||| ||||  |||||||||||    
T  8557380 gcaacataagaaaaatgttgattaaacatatctcacctagaccaatactgatagaaactcaatggaaac-cttataaaatga 8557460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 2831988 - 2832111
Alignment:
Q  198 aaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttt 297  Q
    |||| |||||| |||||||||||||| ||||| | |  |||||||| | |||||||||||||| |||||||||| |||||||||||||||||||  ||||    
T  2831988 aaaccaaactgtaacataagataaactttaatgaaatttatgtcacctggaccaatactcataaaaactcaatgtaaacttttataaaatgacatttttt 2832087  T
Q  298 ttctctttgttaagtatcttctttg 322  Q
    ||||| ||||||||| |||||||||    
T  2832088 ttctc-ttgttaagtttcttctttg 2832111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 360 - 526
Target Start/End: Original strand, 8557723 - 8557888
Alignment:
Q  360 aagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaa 459  Q
    ||||| ||||||||||||||||||||||||||  |||| |||||  ||||||   | | ||||| |||| | ||||| |||| |||||||||    ||||    
T  8557723 aagattaaatcttagtcttttgcatttcttactaaataggattatgttttgtgcatgtttttaacttggtt-tatgtggttggaaacattgtaaaatgaa 8557821  T
Q  460 aatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||||||||| |||||  |||||||||||||||||||| |||| |||||||||||| ||||||||||    
T  8557822 aatgaaattgtaatatttgatgaaatttaaaacattgcagaaaatatgttgtgtttaagctttttaa 8557888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 152 - 317
Target Start/End: Complemental strand, 26758760 - 26758591
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact-----gcaacataagataaacattaattagacatatgtcacata 246  Q
    ||||||| |||||||||||| |||||| ||||| |||||||||||||||| ||||      |||| |||||| ||||| |||| | | |||| |||| |     
T  26758760 tcaaccgcatgatttggttcggtttgcggttttgattttaccaaccaaaccaaaccaaaccgcaatataagaaaaacactaataaaatatatatcacttg 26758661  T
Q  247 gaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatctt 317  Q
     |||||||| ||||||||||||||||||||||| || |||||||| |||||||||| ||||||||| ||||    
T  26758660 aaccaatacccatagaaactcaatgaaaactttaatcaaatgacatattttttctc-ttgttaagtttctt 26758591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 152 - 322
Target Start/End: Complemental strand, 45629713 - 45629549
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagacca 251  Q
    ||||||| ||| ||||||||  |||||||||||||||||||||||||||| |     ||| |||||| ||||| |||||| | |||| |||| | |||||    
T  45629713 tcaaccgcatggtttggttcgatttgcagtttttattttaccaaccaaacca-----caatataagaaaaacactaattaaatatatatcacttggacca 45629619  T
Q  252 atactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    ||||||||||||  |||| | ||||||| ||||||||||| ||||||| | |||||||||| |||||||||    
T  45629618 atactcatagaatttcaacggaaactttaataaaatgacatattttttat-tttgttaagtttcttctttg 45629549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 108 - 322
Target Start/End: Complemental strand, 8355908 - 8355685
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc---------- 197  Q
    |||||| |||||||||||  ||||||||| ||| ||||| ||| ||||||  ||| ||| |||| |||||||||||| |||||| |||||              
T  8355908 aaaaaaatgcatttggtttgaatgtatttagattatttttttactcaaccacatggtttagttcggtttgcagttttgattttatcaaccgaatcaaacc 8355809  T
Q  198 aaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttt 297  Q
    |||| |||| |||| ||||| |||||| |||||| | |||  |||  |||||||||||||||||||| | |||||||||||| |||||||||||  ||||    
T  8355808 aaaccaaaccgcaatataag-taaacactaattaaatatacatcatctagaccaatactcatagaaatttaatgaaaactttaataaaatgacatttttt 8355710  T
Q  298 ttctctttgttaagtatcttctttg 322  Q
    ||||||| ||||||| |||||||||    
T  8355709 ttctcttagttaagtttcttctttg 8355685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 37045779 - 37045676
Alignment:
Q  210 aacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct-ttgtt 308  Q
    ||||||||| |||  ||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||    
T  37045779 aacataagaaaaatgttaattaaacatatgtcatcaagaccaatactcatagaaactcaatgaaaacttttataaaatgtcatattttttttctcttgtt 37045680  T
Q  309 aagt 312  Q
    ||||    
T  37045679 aagt 37045676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 42362818 - 42362926
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| |||| ||||||||||| ||| ||| |||| |||||| |||| ||||||||||||| || |||||||||| ||||||||||||||||||  |    
T  42362818 aaccaaaccaaaccgcaacataagacaaatatttattaaacatatttcacctagaccaatactcttataaactcaatggaaacttttataaaatgac--a 42362915  T
Q  294 ttttttctctt 304  Q
    |||||||||||    
T  42362916 ttttttctctt 42362926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 50578757 - 50578935
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||  |||| |||||| |||||||  | | ||| | |   |||||| |||| | ||    
T  50578757 ttgaaattttagagaatgataaaatcttagtcttttgcatttcttacaaaataggattacgttttgtccatgtttttta-tgcagtctatattgtcgaaa 50578855  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagcttttt 524  Q
    |||||||    |||||| ||||||| |||||  ||||||||||||||||||||||||| || ||||||||| | ||||||    
T  50578856 acattgtaaaatgaaaacgaaattgtaatatttgatgaaatttaaaacattgctgaaaataagttgtgtttaatcttttt 50578935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 304
Target Start/End: Complemental strand, 21563104 - 21562925
Alignment:
Q  128 aatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaac-----caaactaaactgcaacataagataaa 222  Q
    ||||||||  ||| ||||| ||| ||||| ||| |  ||||||| ||||||| ||||||||||| ||||     ||||| |||| |||| |||||| |||    
T  21563104 aatgtattcagatcatttttttactcaactgtaaggattggttcggtttgcattttttattttagcaactgaaacaaaccaaaccgcaatataagaaaaa 21563005  T
Q  223 cattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    ||||||||| ||||  ||||| |||||| |||||||||||||||| ||| ||| |||||| |||||||| ||||||||||||    
T  21563004 cattaattaaacat--gtcacctagaccgatactcatagaaactcgatgtaaatttttatgaaatgacatattttttctctt 21562925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 345 - 526
Target Start/End: Original strand, 25919011 - 25919191
Alignment:
Q  345 ttgaacttttagagaaagataaaa-tcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||||| |||||||| ||||||| | ||||||||||| |||| ||||  | | |||||||||||||||   || |||||||||| |||  || ||||      
T  25919011 ttgaactcttagagaatgataaaaattttagtcttttgtatttattacaaagtttgattactttttgtccacat-tttaatttgg-tctgcgtagttgag 25919108  T
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||| ||||||| |||||||||| | || ||||||||||||||||  ||||| |||||||||||| ||||||||||    
T  25919109 aacattgttggatgaaaataaaattgaaatgttgggtgaaatttaaaacattagtgaaaatatgttgtgttttagctttttaa 25919191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 194 - 410
Target Start/End: Original strand, 22472663 - 22472888
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    ||||||||||||| ||||||||||| ||||| ||||||   |||| |||| || || |||||||||||||||||||||||||  | ||| |||||||| |    
T  22472663 aaccaaactaaaccgcaacataagaaaaacactaattaactatatatcacctaaactaatactcatagaaactcaatgaaaatatctatcaaatgacata 22472762  T
Q  294 ttttttctctttgttaagtatcttctttg-nnnnnnnctca---------ttaaattctatttgaacttttagagaaagataaaatcttagtcttttgca 383  Q
    ||||||||| ||||||||| |||| ||||         |||         |||  ||||| ||||||||||||| || |||||||||||||| |||||||    
T  22472763 ttttttctc-ttgttaagtttcttatttgtcttttatttcaaaaatgtatttatgttctacttgaacttttagaaaatgataaaatcttagtattttgca 22472861  T
Q  384 tttcttaccgaatatgattactttttg 410  Q
    ||||||||  |||||||||||||||||    
T  22472862 tttcttacataatatgattactttttg 22472888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 349 - 526
Target Start/End: Original strand, 42362980 - 42363156
Alignment:
Q  349 acttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacat 448  Q
    |||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||||||    | ||||| || ||||||||| |||| || |||    
T  42362980 acttttagagaatgataaaatcttagtattttgcatttcttacaaaatatgattactttttgtccacgtttttaactt-ggtctatgtcgttggaatcat 42363078  T
Q  449 tgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||    ||||||| |||||| ||| |  ||||||||| ||||||||||  ||| |||||||  |||| |||||||||    
T  42363079 tgtaaaatgaaaattaaattgtaatgtttgatgaaattgaaaacattgcgaaaaatatgttgcttttcggctttttaa 42363156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 524
Target Start/End: Complemental strand, 4280607 - 4280430
Alignment:
Q  349 acttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacat 448  Q
    ||||||||| || |||||||||||||||| |||||||| ||||  |||||||||| ||||||||  | | || ||||||| ||||||| |||| |||||     
T  4280607 acttttagaaaatgataaaatcttagtctgttgcatttattacaaaatatgattattttttgtccatgttttaaatttgg-tctatgtagttggaaacaa 4280509  T
Q  449 tgttggt---tgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagcttttt 524  Q
    | |||     ||| |||||||||| ||| | |||||||||||||||||||||||||| ||||| |||||| || |||||    
T  4280508 tattgtccaatgataatgaaattgtaatgttggatgaaatttaaaacattgctgaaaatatgtagtgttttagtttttt 4280430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 321
Target Start/End: Complemental strand, 20846976 - 20846832
Alignment:
Q  174 tttgcagtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaa 273  Q
    ||||||||||| ||||||| ||||||  | ||| ||||||||||| |||| ||||||| |  ||| |||| ||||| |||||||||| || |||||  ||    
T  20846976 tttgcagttttcattttacgaaccaa--ttaaccgcaacataagaaaaactttaattacatctatatcacctagactaatactcatataagctcaacaaa 20846879  T
Q  274 aacttttataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    |||||||||||||||||| |||||||||| |||| |||| ||||||||    
T  20846878 aacttttataaaatgacatattttttctc-ttgtaaagtttcttcttt 20846832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 318
Target Start/End: Original strand, 22255801 - 22256019
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc---------a 198  Q
    ||||||| |||||| ||||||||||||||| || ||||| ||| |||| || ||  |||||||| |||||| ||||| |||||| |||||         |    
T  22255801 aaaaaaccgcatttagttcaaatgtatttgaatcatttttttactcaatcgcatagtttggttcggtttgcggttttgattttatcaaccgaccaaacca 22255900  T
Q  199 aactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttt 298  Q
    ||| |||| || | |||||| ||||| |||||| | |||| |||| |||||||||||||||| ||| |||||| ||||||| ||||||||  | ||||||    
T  22255901 aaccaaaccgcgatataagaaaaacactaattaaatatatatcacgtagaccaatactcatataaattcaatggaaactttaataaaatgttatattttt 22256000  T
Q  299 tctctttgttaagtatcttc 318  Q
    |||| ||||||||| |||||    
T  22256001 tctc-ttgttaagtttcttc 22256019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 322
Target Start/End: Complemental strand, 48169191 - 48169029
Alignment:
Q  164 tttggttcagtttgcagtttttattttaccaaccaaactaaact-----gcaacataagataaacattaattagacatatgtcacatagaccaatactca 258  Q
    |||||||| |||||| ||||| |||||||||||||||| ||||      |||| |||||| ||| | |||| | | |||| |||| ||||||||||||||    
T  48169191 tttggttcggtttgcggttttcattttaccaaccaaaccaaaccaaacagcaatataagaaaaatactaataaaatatatatcacttagaccaatactca 48169092  T
Q  259 tagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
     ||||||| |||||||||||| ||||||||||| ||||||||| | || ||||| |||||||||    
T  48169091 aagaaacttaatgaaaactttaataaaatgacatattttttct-tctgctaagtttcttctttg 48169029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 322
Target Start/End: Complemental strand, 4280828 - 4280644
Alignment:
Q  152 tcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaa----------actgcaacataagataaacattaattagacatatgtc 241  Q
    ||||||| ||| |||||||| |||||| |||||||||||||||||| ||| ||          || ||| ||||||| ||||||| |||| |||||||||    
T  4280828 tcaaccgcatggtttggttcggtttgcggtttttattttaccaaccgaacaaagtcaagtcaaaccgcagcataagaaaaacattgattaaacatatgtc 4280729  T
Q  242 acatagac-----caatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    || |||||     || || ||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| | |||||||    
T  4280728 acctagactagaccactaatcatagaaactcaatgaaaacttctataaaatgacatattttttctc-ttgttaagtttattctttg 4280644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 109 - 299
Target Start/End: Original strand, 50578501 - 50578702
Alignment:
Q  109 aaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaa----------cca 198  Q
    |||||| ||||||||||   ||||| | |||| ||||||||  |||||||||||||||||||  |||||| ||||| ||||||||||          |||    
T  50578501 aaaaaccgcatttggtttggatgtaatcggatcattttcttgctcaaccgtatgatttggtttggtttgcggttttcattttaccaattgaaccgaacca 50578600  T
Q  199 aactaaactgcaacataagataaacattaattagacatatgtcacata-gaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttt 297  Q
    ||| |||| ||||||||||| |||  ||| ||| | |||| |||| || ||||||||||||||||||||||||| ||  ||||||||||||||| |||||    
T  50578601 aaccaaaccgcaacataagaaaaatgttagttaaatatatctcacctaagaccaatactcatagaaactcaatggaagtttttataaaatgacatatttt 50578700  T
Q  298 tt 299  Q
    ||    
T  50578701 tt 50578702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 490
Target Start/End: Complemental strand, 4763845 - 4763709
Alignment:
Q  353 ttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgtt 452  Q
    |||||||| |||||||||||||| |||||||||||| |  ||||| |||||||||||| |  ||| ||||| || ||| |||||||||| |||||| |||    
T  4763845 ttagagaatgataaaatcttagtattttgcatttctaatggaataagattactttttgcccatatttttaaatt-ggtttatgttgttggaaacatggtt 4763747  T
Q  453 ggttgaaaatgaaattgaaatatgggatgaaatttaaa 490  Q
       | |||||||||||| ||||| ||||||||||||||    
T  4763746 aaataaaaatgaaattgtaatattggatgaaatttaaa 4763709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 299
Target Start/End: Complemental strand, 52632706 - 52632509
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaact 207  Q
    ||||||||||||||||||   |||||||   || | ||| ||| ||||| | ||| |||||||  |||||| |||||||||||||||||||||| ||||     
T  52632706 aaaaaactgcatttggtttggatgtattcatatcacttttttactcaactgcatggtttggtttggtttgcggtttttattttaccaaccaaaccaaacc 52632607  T
Q  208 -----gcaacataagataaacattaattagac-atatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaatttttt 299  Q
         ||||||||| | || || |||||| |  |||||| ||||| ||||||||||||| |||||||| | ||||||||||||||||||| |||||||    
T  52632606 aaaccgcaacataataaaagcactaattaaaatatatgtgacatataccaatactcatacaaactcaacggaaacttttataaaatgacatatttttt 52632509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 55467241 - 55467365
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaa 293  Q
    |||||||| ||||  ||| |||||| ||||| ||| || | |||| |||| |  |||||||||||||||||||||||||||||||| |||||||||||      
T  55467241 aaccaaaccaaacctcaatataagaaaaacactaactaaatatatatcacttgaaccaatactcatagaaactcaatgaaaactttaataaaatgacatg 55467340  T
Q  294 ttttttctctttgttaagtatcttct 319  Q
    |||||||| |||||||||| ||||||    
T  55467341 ttttttct-tttgttaagtttcttct 55467365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 516
Target Start/End: Original strand, 5640486 - 5640654
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||  |||| |||||| |||||||  | |  |||| || ||| ||| ||||||  |    
T  5640486 ttgaaattttagagaatgataaaatcttagtcttttgcatttcttacaaaataggattacattttgtccatgttattaactt-ggtatatattgttg-ga 5640583  T
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttc 516  Q
    |||||||    || ||||||||||| |||||  ||||||||||||||||||| ||||| |||| ||||||||    
T  5640584 acattgtaaaatg-aaatgaaattgtaatatttgatgaaatttaaaacattgttgaaaatatggtgtgtttc 5640654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 26758552 - 26758372
Alignment:
Q  345 ttgaacttttagagaaagataa-aatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgta 443  Q
    ||||||| ||| |||| ||||| ||| ||||||||||| |||| ||||| |||||||||||||||| ||    |  |||| ||  |||||  | ||||      
T  26758552 ttgaactcttacagaatgataacaattttagtcttttgtatttattaccaaatatgattactttttatccgcgt--ttaaatttagtctacatagttggg 26758455  T
Q  444 aacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||| ||||||| |||||| ||| | |  ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  26758454 aacattgttggatgaaaataaaattgtaattttgagtgaaatttaaaacattgctgaaaatatgttgtgttttagctttttaa 26758372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 507
Target Start/End: Original strand, 55467395 - 55467561
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatc--ttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttg 438  Q
    ||| ||||||| |||||||| |||||||    ||||||||||| |||||||||  |||||||||||||||||||      ||||| || |||||| || |    
T  55467395 ctacttgaactcttagagaatgataaaaaaaattagtcttttgtatttcttacaaaatatgattactttttgtc--cgcgtttaaatttggtctacgtag 55467492  T
Q  439 ttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatg 507  Q
    |||  ||||||||||| ||||||| ||||||  || | |||||||||||||||||||||||||| ||||    
T  55467493 ttgcgaacattgttggatgaaaataaaattgttatgttggatgaaatttaaaacattgctgaaaatatg 55467561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 116 - 322
Target Start/End: Original strand, 45914727 - 45914929
Alignment:
Q  116 gcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgcaacata 215  Q
    |||||||||||  ||||||| |||| | | | ||| ||||||| ||| |||||||  |||||| ||||| ||||||| ||||||||      |||| |||    
T  45914727 gcatttggttcggatgtattcggatcaatattttactcaaccgcatggtttggtttggtttgcggttttgattttactaaccaaacc-----gcaatata 45914821  T
Q  216 agataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct-ttgttaagtat 314  Q
    ||| ||| | |||||| | |||| |||  | |||||||||||| |||  ||||||||||||||| ||||||||||| ||||||| ||| ||||||||| |    
T  45914822 agaaaaatactaattaaatatatatcatttggaccaatactcaaagaggctcaatgaaaactttaataaaatgacatattttttttctcttgttaagttt 45914921  T
Q  315 cttctttg 322  Q
    ||| ||||    
T  45914922 cttgtttg 45914929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 524
Target Start/End: Original strand, 2566085 - 2566269
Alignment:
Q  339 ttctatttgaacttttagagaaagataaa-atcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgtt 437  Q
    ||||| ||||||| |||||||| ||| || || ||||||||||| ||||||| |  |||| |||||||||||| |  | | |||||||||| ||||  |     
T  2566085 ttctacttgaactcttagagaatgattaatattttagtcttttgtatttctttcaaaataggattactttttgcccatgt-tttaatttgg-tctacata 2566182  T
Q  438 gttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagcttttt 524  Q
    |||   ||||||||||| ||||||| |||||| ||| |  ||||||||||||||||| | ||||| |||||||||||| ||||||||    
T  2566183 gtttggaacattgttggatgaaaataaaattgtaatgttagatgaaatttaaaacatggttgaaaatatgttgtgttttagcttttt 2566269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 515
Target Start/End: Complemental strand, 21562866 - 21562710
Alignment:
Q  357 agaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggtt 456  Q
    |||| |||||||||||| || ||||||||||| |   |||||||||||||||||||   || ||| |||| ||||||||| |||| |||||||||||| |    
T  21562866 agaatgataaaatcttattcatttgcatttctaataaaatatgattactttttgtccacattttttattt-ggtctatgtagttgaaaacattgttgggt 21562768  T
Q  457 gaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    || ||| ||||||  | || ||||| ||||||||| ||||  |||| ||||||||||||    
T  21562767 gataattaaattgtgacattggatg-aatttaaaagattggcgaaaatatgttgtgttt 21562710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 526
Target Start/End: Complemental strand, 27054402 - 27054222
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaa 444  Q
    ||||||| |||| ||| ||| |||| ||| ||||||| |||||||||  |||||||||||||||||||  ||| |||||||| ||| ||| | ||||  |    
T  27054402 ttgaactcttagtgaatgattaaattttactcttttgtatttcttacaaaatatgattactttttgtccatat-tttaattt-ggtttatatagttggga 27054305  T
Q  445 acattgttggttg-aaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    | |||||||| || ||||| |||||| |||   |||||| |||||||| ||||| |||| |||||||||||| | ||||||||    
T  27054304 atattgttggatgcaaaataaaattgcaattatggatgagatttaaaaaattgcagaaaatatgttgtgttttaactttttaa 27054222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 266
Target Start/End: Complemental strand, 4670141 - 4669984
Alignment:
Q  109 aaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactg 208  Q
    ||||| ||||||| ||||| |||||||  ||| ||||||||| || || | ||| |||| ||   ||||| ||||||||||||  |||||||  |||| |    
T  4670141 aaaaaatgcatttagttcagatgtattaagattattttcttactccactgcatggtttgttttgatttgcggtttttattttattaaccaaatcaaaccg 4670042  T
Q  209 caacataagataaacattaattagacatatgtcacatagaccaatactcatagaaact 266  Q
    |||||||||| ||||| |||||| || |||||||| || || |||||||||| |||||    
T  4670041 caacataagaaaaacaataattaaacttatgtcacttaaactaatactcatataaact 4669984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 526
Target Start/End: Original strand, 38651765 - 38651928
Alignment:
Q  364 taaaatcttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatg 463  Q
    |||||||||||||||||| ||||||||   |||| |||||| |||||||  | |  |||| || |||||||||||||| |||||||||    | |||||     
T  38651765 taaaatcttagtcttttgtatttcttagaaaataggattacattttgtccatgttgttaactt-ggtctatgttgttggaaacattgtaaaataaaaata 38651863  T
Q  464 aaattgaaatatgggatgaaatttaaaacattgct--gaaattatgttgtgtttcagctttttaa 526  Q
    |||||| |||||  |||||||||||||||||||||   ||| |||||||||||| | ||||||||    
T  38651864 aaattgtaatatttgatgaaatttaaaacattgctagaaaaatatgttgtgttttaactttttaa 38651928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 291
Target Start/End: Original strand, 46252948 - 46253147
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc---------- 197  Q
    ||||||| ||||||| |||  |||||||  ||| | ||| ||||||||||||||| |||||||| |||||| ||||| ||||||| ||||              
T  46252948 aaaaaaccgcatttgattcggatgtattcagatcaattttttattcaaccgtatggtttggttcggtttgcggttttaattttactaaccgaagcaaacc 46253047  T
Q  198 aaactaaactgcaacataagataaacattaattagacatatgt------cacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||| |||| |||| |||||| ||||| |||||| | |||| |      ||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  46253048 aaaccaaaccgcaatataagaaaaacactaattaaatatatatatatatcacttggaccaatactcatagaaactcaatgaaaactttaataaaatgaca 46253147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 38651686 - 38651738
Alignment:
Q  252 atactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctt 304  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  38651686 atactcatagaaactcaatggaaacttttataaaattacatattttttctctt 38651738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 526
Target Start/End: Complemental strand, 45629425 - 45629337
Alignment:
Q  438 gttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    |||| |||||||||||| ||||||| |||||| ||| | | ||||||||||||| |||||||||| |||||| ||||| | ||||||||    
T  45629425 gttgaaaacattgttggatgaaaataaaattgtaatgttgtatgaaatttaaaatattgctgaaaatatgttatgttttacctttttaa 45629337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 455 - 526
Target Start/End: Complemental strand, 25466020 - 25465949
Alignment:
Q  455 ttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||||||||||||| ||| |  ||||||||||||||||||| ||||| |||||||||||| ||| ||||||    
T  25466020 ttgaaaatgaaattgtaatgtttgatgaaatttaaaacattgttgaaaatatgttgtgttttagccttttaa 25465949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 25918905 - 25918956
Alignment:
Q  247 gaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttt 298  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  25918905 gaccaatacttatagaaactcaatggaaactttaataaaatgacaaattttt 25918956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 54122819 - 54122697
Alignment:
Q  180 gtttttattttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttt 279  Q
    ||||| ||||||| |||||||| |||| |||| |||||| ||||  |||||| | | |||| || ||||  |||| |||||||||||||||| |||||||    
T  54122819 gttttgattttactaaccaaaccaaaccgcaatataagaaaaacgctaattaaatacatgt-acctagaataatattcatagaaactcaatggaaacttt 54122721  T
Q  280 tataaaatgacaaattttttctct 303  Q
     |||| |||||| |||||||||||    
T  54122720 aataatatgacatattttttctct 54122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 34635607 - 34635668
Alignment:
Q  348 aacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttg 410  Q
    ||||||||||||| |||||||| |||||||||||||||||||| |||||| | ||||||||||    
T  34635607 aacttttagagaatgataaaatattagtcttttgcatttcttatcgaata-ggttactttttg 34635668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 10481218 - 10481315
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||||||| |||| ||||||||||| ||||  |||||| ||||||| ||| |||| ||||||| ||||||||| |||| ||| || ||||||| ||||    
T  10481218 aaccaaaccaaaccgcaacataagaaaaactgtaattaaacatatgccacctagatcaatacttatagaaacttaatggaaatttgtataaaaagaca 10481315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 25399508 - 25399435
Alignment:
Q  189 ttaccaaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcataga 262  Q
    |||||||| |||| ||||  ||||||||| ||||||||||||| ||||||||||  ||||||||||||| ||||    
T  25399508 ttaccaacaaaaccaaacctcaacataagttaaacattaattaaacatatgtcatctagaccaatactcgtaga 25399435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 20846799 - 20846731
Alignment:
Q  344 tttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||||||||||||||| |||||||||||| ||||||  |||||||||  ||||| |||||||| ||||    
T  20846799 tttgaacttttagagaatgataaaatcttaatcttttatatttcttacataatataattactttgtgtc 20846731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 36330313 - 36330397
Alignment:
Q  235 atatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctc-tttgttaagtatcttc 318  Q
    ||||||||| ||||||||||  || |||||||||||||||||||||||||| | ||  ||||||| || |||||||||| |||||    
T  36330313 atatgtcacctagaccaataaccaaagaaactcaatgaaaacttttataaagtaacgtattttttttcttttgttaagtttcttc 36330397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 38681690 - 38681602
Alignment:
Q  203 aaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca 291  Q
    |||| ||||||||||| ||||| |||||| |  |||| ||  ||||| ||||||| || ||| ||||||||||||||||||||||||||    
T  38681690 aaaccgcaacataagaaaaacactaattaaatctatgccatctagactaatactcgtaaaaattcaatgaaaacttttataaaatgaca 38681602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 25858762 - 25858632
Alignment:
Q  111 aaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaactaaactgca 210  Q
    |||| ||||||||||  |||||||| ||   ||||| |||||||||||  || ||| ||| | ||| |||||||||||||||||||  | | ||| ||||    
T  25858762 aaaccgcatttggtttgaatgtattagggccatttt-ttattcaaccgcgtggttttgttaaatttacagtttttattttaccaacggagccaaattgca 25858664  T
Q  211 acataagataaacattaattagacatatgtca 242  Q
    || ||||| |||||||||||| ||||||||||    
T  25858663 acctaagagaaacattaattaaacatatgtca 25858632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 36330434 - 36330501
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||| |||||||||| |||| |||||||||||||| ||||||||||  ||||  |||||||||||||    
T  36330434 ttgaatttttagagaatgatacaatcttagtctttttcatttcttacataatagaattactttttgtc 36330501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 4669055 - 4668990
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttg 410  Q
    |||||||||||||||| |||||||| ||||| |||| ||||||| ||  |||| ||||||||||||    
T  4669055 ttgaacttttagagaatgataaaatattagtattttacatttctaacgtaataagattactttttg 4668990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 347 - 392
Target Start/End: Complemental strand, 21238359 - 21238314
Alignment:
Q  347 gaacttttagagaaagataaaatcttagtcttttgcatttcttacc 392  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||    
T  21238359 gaacttttagagaatgataaaattttagtcatttgcatttcttacc 21238314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 345 - 441
Target Start/End: Complemental strand, 44662260 - 44662162
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaa---tatgattactttttgtctttatctttaatttgggtctatgttgttg 441  Q
    ||||||||||| |||| |||||||||||||||||| |||||| ||||  ||   ||  ||||||||||||| || | |||||||| ||||||||||||||    
T  44662260 ttgaacttttaaagaatgataaaatcttagtctttggcatttattacaaaatagtagtattactttttgtccttgtttttaattt-ggtctatgttgttg 44662162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 51661875 - 51661964
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaacc 197  Q
    ||||||| ||||||| |||  ||||||| |||| | ||| ||||||||||| ||| |||||||  |||||| |||||| |||||||||||    
T  51661875 aaaaaaccgcatttgattcggatgtattcggatcacttttttattcaaccgcatggtttggtttggtttgcggtttttgttttaccaacc 51661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 299
Target Start/End: Original strand, 5640325 - 5640429
Alignment:
Q  195 accaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaat 294  Q
    ||||||| |||||||||||||||| |||  ||||||| |||||| |||| || ||| ||||| |||||| ||||| | ||  |||||| |||||| | ||    
T  5640325 accaaaccaaactgcaacataagaaaaatgttaattaaacatatctcacctaaaccgatacttatagaacctcaacggaattttttatgaaatgatatat 5640424  T
Q  295 ttttt 299  Q
    |||||    
T  5640425 ttttt 5640429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 523
Target Start/End: Original strand, 5671872 - 5671936
Alignment:
Q  459 aaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttt 523  Q
    ||||||||||| |||||  |||||||||||||||| || ||||| |||| ||||||||| |||||    
T  5671872 aaatgaaattgtaatatttgatgaaatttaaaacaatgttgaaaatatggtgtgtttcaactttt 5671936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 523
Target Start/End: Original strand, 5681369 - 5681433
Alignment:
Q  459 aaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgtttcagctttt 523  Q
    ||||||||||| |||||  |||||||||||||||| || ||||| |||| ||||||||| |||||    
T  5681369 aaatgaaattgtaatatttgatgaaatttaaaacaatgttgaaaatatggtgtgtttcaactttt 5681433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 496
Target Start/End: Original strand, 30739469 - 30739537
Alignment:
Q  428 ggtctatgttgttgtaaacattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattg 496  Q
    ||||||||||| || |||||||||||| |||||||||||||| ||| |  ||| |||||| ||||||||    
T  30739469 ggtctatgttgatggaaacattgttggatgaaaatgaaattgtaatgtcagatcaaatttcaaacattg 30739537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 510
Target Start/End: Original strand, 45914992 - 45915129
Alignment:
Q  371 ttagtcttttgcatttcttaccgaatatgattactttttgtctttatctttaatttgggtctatgttgttgtaaacattgttggttgaaaatgaaattga 470  Q
    ||||||||||  ||||||||   |||||||||||||||| | ||  |  |||| || |||||| || ||||  |||| |||| | ||||||| ||||||     
T  45914992 ttagtcttttttatttcttaaaaaatatgattactttttattttcgt--ttaaatttggtctacgtagttgagaacactgtttgatgaaaataaaattgt 45915089  T
Q  471 aatatgggatgaaatttaaaacattgctgaaattatgttg 510  Q
    ||| | |||||||||||||||||||| ||||| |||||||    
T  45915090 aatgttggatgaaatttaaaacattgttgaaaatatgttg 45915129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 55467140 - 55467224
Alignment:
Q  108 aaaaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttac 192  Q
    ||||||| ||||||||||   |||||||  ||| | ||| ||| ||||||||||| |||||||| |||||||||||| |||||||    
T  55467140 aaaaaaccgcatttggtttggatgtattcagatcaattttttactcaaccgtatggtttggttcggtttgcagttttgattttac 55467224  T

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Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 2565825 - 2565896
Alignment:
Q  129 atgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaa 200  Q
    ||||||| |||| ||||| ||| ||||| | ||| |||||||| |||||| ||||| |||||||||||||||    
T  2565825 atgtattcggattatttttttactcaactggatggtttggttcggtttgcggttttgattttaccaaccaaa 2565896  T

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Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 34185402 - 34185493
Alignment:
Q  110 aaaactgcatttggttcaaatgtatttggataattttcttattcaaccgtatgatttggttcagtttgcagtttttattttaccaaccaaac 201  Q
    |||||||||||||||||  ||| |||  ||| ||||| | | ||||||| ||| || ||||  ||||||| |||||||||||||||||||||    
T  34185402 aaaactgcatttggttcggatgcattcagatcattttttgactcaaccgcatggttcggtttggtttgcactttttattttaccaaccaaac 34185493  T

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Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 411
Target Start/End: Original strand, 51660895 - 51660942
Alignment:
Q  364 taaaatcttagtcttttgcatttcttaccgaatatgattactttttgt 411  Q
    |||| ||||||| ||||| ||||||||| |||||||||||||||||||    
T  51660895 taaagtcttagtattttgtatttcttacagaatatgattactttttgt 51660942  T

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Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 52632349 - 52632282
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttgtc 412  Q
    ||||| |||||||||| |||||||||||||| |||| ||||||||||  || || |||| ||||||||    
T  52632349 ttgaagttttagagaatgataaaatcttagtattttacatttcttacataacattattaatttttgtc 52632282  T

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Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 32073070 - 32073120
Alignment:
Q  253 tactcatagaaactcaatgaaaacttttataaaatgacaaattttttctct 303  Q
    |||||||||||| |||||||||  ||||||| ||||||| |||||||||||    
T  32073070 tactcatagaaattcaatgaaattttttatagaatgacatattttttctct 32073120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 17144488 - 17144537
Alignment:
Q  341 ctatttgaacttttagagaaagataaaatcttagtcttttgcatttctta 390  Q
    ||||||||||||||| | |   ||||||||||||||||||||||||||||    
T  17144488 ctatttgaacttttaaatatttataaaatcttagtcttttgcatttctta 17144537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 22257391 - 22257435
Alignment:
Q  482 aaatttaaaacattgctgaaattatgttgtgtttcagctttttaa 526  Q
    ||||| ||||||||||||||| ||||||| |||| ||||||||||    
T  22257391 aaattaaaaacattgctgaaaatatgttgcgttttagctttttaa 22257435  T

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Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 512
Target Start/End: Complemental strand, 52632251 - 52632195
Alignment:
Q  456 tgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtg 512  Q
    ||||||||||| || ||| ||| |||||||| ||||||||||| ||| |||||||||    
T  52632251 tgaaaatgaaaatgtaatttggaatgaaattaaaaacattgctaaaaatatgttgtg 52632195  T

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Target: scaffold0664 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 210 - 321
Target Start/End: Complemental strand, 6449 - 6339
Alignment:
Q  210 aacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgtta 309  Q
    ||||||||| ||||| |||||| ||||||||||| || ||||||||||||||||||| ||||||||||| ||||| |||||| |||||||||| ||||||    
T  6449 aacataagaaaaacactaattaaacatatgtcacctaaaccaatactcatagaaacttaatgaaaacttctataacatgacatattttttctc-ttgtta 6351  T
Q  310 agtatcttcttt 321  Q
    ||| ||||||||    
T  6350 agtttcttcttt 6339  T

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Target: scaffold0001 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 428114 - 428004
Alignment:
Q  209 caacataagataaacattaattagacatatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgtt 308  Q
    |||||| ||| ||| | |||||| |||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||    
T  428114 caacatcagaaaaataataattaaacatatgtcacataaaccaatactcattaaaactcaatgaaaacttttataaaatgacatattttttctc-ttgtt 428016  T
Q  309 aagtatcttctt 320  Q
    |||| |||||||    
T  428015 aagtttcttctt 428004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 304
Target Start/End: Original strand, 405807 - 405875
Alignment:
Q  237 atgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgaca-aattttttctctt 304  Q
    |||||||||| ||  ||||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  405807 atgtcacataaactcatactcatagaaattcaatggaaacttttataaaatgatacaattttttctctt 405875  T

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Target: scaffold0204 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 236 - 322
Target Start/End: Complemental strand, 26307 - 26222
Alignment:
Q  236 tatgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttctttg 322  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||| |||||||||    
T  26307 tatgtcacctagaccaatactcatagaaactcaatggaaacttttataaaatgacatattttttct-attgttaagtttcttctttg 26222  T

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Target: scaffold0204; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 15008 - 14898
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacat-atgtcacatagaccaatactcatagaaactcaatgaaaacttttataaaatgacaa 292  Q
    |||||||| |||| ||||||||| | ||||| |||||| |  | ||||||| |||||||||||||||| ||| |||| | |||||||||||||| || |     
T  15008 aaccaaaccaaaccgcaacataataaaaacaataattaaaatttatgtcacctagaccaatactcatacaaa-tcaacggaaacttttataaaaagatat 14910  T
Q  293 attttttctctt 304  Q
    ||||||||||||    
T  14909 attttttctctt 14898  T

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Target: scaffold0688 (Bit Score: 49; Significance: 9e-19; HSPs: 6)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 194 - 321
Target Start/End: Complemental strand, 1662 - 1531
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaact-----caatgaaaacttttataaaatg 288  Q
    |||||||| ||||  |||||||||| ||||| |||||| ||||||||    |||||||||| |||||||||||     ||||||||||||||||||||||    
T  1662 aaccaaaccaaaccacaacataagaaaaacactaattaaacatatgttgtctagaccaatattcatagaaactaaactcaatgaaaacttttataaaatg 1563  T
Q  289 acaaattttttctctttgttaagtatcttcttt 321  Q
    ||| |||||||||| ||||||||| || |||||    
T  1562 acatattttttctc-ttgttaagtttcctcttt 1531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 8158 - 8100
Alignment:
Q  262 aaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||| || |||||    
T  8158 aaactcaatgaaaacttttataaaatgacatattttttctc-ttgttaagtttcctcttt 8100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 321
Target Start/End: Complemental strand, 3255 - 3125
Alignment:
Q  194 aaccaaactaaactgcaacataagataaacattaattagacatatgtcacatagaccaatactcatagaaact-----caatgaaaacttttataaaatg 288  Q
    |||||||| ||||  |||||||||| ||||| |||||| |||||| |    || ||||||| |||||||||||     ||||||||||||||||||||||    
T  3255 aaccaaaccaaaccacaacataagaaaaacactaattaaacatatattgtctaaaccaatattcatagaaactaaactcaatgaaaacttttataaaatg 3156  T
Q  289 acaaattttttctctttgttaagtatcttcttt 321  Q
    ||| | |||||||| ||||||||| ||||||||    
T  3155 acata-tttttctc-ttgttaagtttcttcttt 3125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 4849 - 4792
Alignment:
Q  262 aaactcaatgaaaacttttataaaatgacaaattttttctctttgttaagtatcttcttt 321  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||    
T  4849 aaactcaatgaaaacttttataaaatgacata-tttttctc-ttgttaagtttcttcttt 4792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 1501 - 1437
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttg 410  Q
    ||||||||||||| || ||||||||||||||  ||||||||| |||| ||||| ||||| ||||||    
T  1501 ttgaacttttagacaatgataaaatcttagt-atttgcattttttacagaataagattattttttg 1437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 8070 - 8006
Alignment:
Q  345 ttgaacttttagagaaagataaaatcttagtcttttgcatttcttaccgaatatgattactttttg 410  Q
    ||||||||||||| || ||||||||||||||  ||||||||| |||| ||||| ||||| ||||||    
T  8070 ttgaacttttagacaatgataaaatcttagt-atttgcattttttacagaataagattattttttg 8006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 515
Target Start/End: Complemental strand, 62638 - 62568
Alignment:
Q  445 acattgttggttgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaattatgttgtgttt 515  Q
    |||||||| | ||||||| |||| | ||| | |||||||||||||||||||||||||| ||| ||||||||    
T  62638 acattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaatatattgtgttt 62568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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