View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18227_high_20 (Length: 374)
Name: NF18227_high_20
Description: NF18227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18227_high_20 |
 | |
|
| [»] scaffold0057 (1 HSPs) |
| | |
|
| [»] scaffold0006 (1 HSPs) |
| | |
|
| [»] scaffold0251 (1 HSPs) |
| | |
|
| [»] scaffold0189 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 5376890 - 5377095
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5376890 |
tagttgataagtaaactagagttagtagtttggttagaagttagttagagttagttactcaaactaatctcttatatataggaacactattgtactcatt |
5376989 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| |||||| || |
|
|
| T |
5376990 |
caatatcttttatcaatctattcatttctacaatgagtttctatgagtatctcccacatgagtactcttatgcttgctatcttgcttacatctatgactt |
5377089 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
5377090 |
ttctcc |
5377095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 5378745 - 5378950
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5378745 |
tagttgataagtaaactagagttagtagtttggttagaagttagttagagttagttactcaaactaatctcttatatataggaacactattgtactcatt |
5378844 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| |||||| || |
|
|
| T |
5378845 |
caatatcttttatcaatctattcatttctacaatgagtttctatgagtatctcccacatgagtactcttatgcttgctatcttgcttacatctatgactt |
5378944 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
5378945 |
ttctcc |
5378950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 155 - 351
Target Start/End: Complemental strand, 1088871 - 1088676
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||| ||||| || ||| || ||||||||||||||||| ||||||| |||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
1088871 |
tagttgataagtaaattagagttagtagctttgttagaagttagttagagttagttagtcaaactaatctct-atatataggaacactattgtactcatt |
1088773 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttc-taagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatga |
351 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
1088772 |
catcatcttttatcaatctattca-ttctataatgagtttcttttgagtatctcccatatgagtactcttatgtttgctatcttgcttacatctatga |
1088676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 155 - 360
Target Start/End: Complemental strand, 19645518 - 19645314
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
|||||||||||||||||| || || ||| |||||||||| ||||| ||| ||||||||||||||||||| | ||||||| ||||||||||||||||||| |
|
|
| T |
19645518 |
tagttgataagtaaactaaagttagtagcttggttagaaattagtcagaggtagttactcaaactaatctct-atatataagaacactattgtactcatt |
19645420 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||| ||||| ||||||||||| ||||| |||||| || |
|
|
| T |
19645419 |
cattatcttttatcaatctatttatttctacaatgaatttctttgagtatctccctcatgagtactcttatacttgctatcttggttacatctatgactt |
19645320 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
19645319 |
ttctcc |
19645314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 15868405 - 15868514
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
15868405 |
tagttgataggtaaactagagttaatagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcatt |
15868503 |
T |
|
| Q |
255 |
catcatctttt |
265 |
Q |
| |
|
||| ||||||| |
|
|
| T |
15868504 |
cattatctttt |
15868514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 15149263 - 15149116
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaac--actattgtact-- |
250 |
Q |
| |
|
||||||||||||||||||| | | ||| |||||||||||||||||||| ||||||||||||| |||| || ||||||||||||| ||| ||||||| |
|
|
| T |
15149263 |
tagttgataagtaaactagggtcagtagcttggttagaagttagttagagttagttactcaaattaat-ttctatatataggaacgtactgttgtactgt |
15149165 |
T |
|
| Q |
251 |
---cattcatcatcttttatcaatctattcatttctacaatgagtttct |
296 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15149164 |
actcattcattatcttttatcaatctattcatttctacaatgagtttct |
15149116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 330
Target Start/End: Original strand, 9415095 - 9415255
Alignment:
| Q |
169 |
actagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcattcatcatctttt-at |
267 |
Q |
| |
|
||||||| || ||| |||||||||||||||||||| ||||||| | ||||||||| | |||||||| |||||||||||||||| | ||||||||| || |
|
|
| T |
9415095 |
actagagttagtagcttggttagaagttagttagagttagttagtgaaactaatc-tctatatataagaacactattgtactctctagtcatcttttaat |
9415193 |
T |
|
| Q |
268 |
c-aatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttg |
330 |
Q |
| |
|
| |||||| ||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
9415194 |
caaatcta-tca-ttctacaatgagtttctatgagtatctcccacatgagtactcttatgtttg |
9415255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 15866593 - 15866702
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||| ||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||||| |
|
|
| T |
15866593 |
tagttgataggtaaactagagttaatagcttgggtagaagttagttagagttagttactcaaactaatc-tctatatttaggaacactattgtactcatt |
15866691 |
T |
|
| Q |
255 |
catcatctttt |
265 |
Q |
| |
|
||| ||||||| |
|
|
| T |
15866692 |
cattatctttt |
15866702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 33866112 - 33866221
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
33866112 |
tagttgataggtaaactagagttagtagcttggttagaagttagttagagttagttactcagactaatc-tctatatataggaacactattgtactcatt |
33866210 |
T |
|
| Q |
255 |
catcatctttt |
265 |
Q |
| |
|
|| ||||||| |
|
|
| T |
33866211 |
cactatctttt |
33866221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 8915570 - 8915681
Alignment:
| Q |
245 |
tgtactcattcatcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttaca |
344 |
Q |
| |
|
|||||||||| | |||||||||| |||||||||||||||| ||| |||||||| |||||||| ||||| |||||| |||||| ||||| ||||||||||| |
|
|
| T |
8915570 |
tgtactcatttagcatcttttattaatctattcatttctataataagtttctatgagtatcttccacacgagtactcttatgcttgctctcttgcttaca |
8915669 |
T |
|
| Q |
345 |
gctatgattttt |
356 |
Q |
| |
|
||||||||||| |
|
|
| T |
8915670 |
tctatgattttt |
8915681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 33869259 - 33869368
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||| |||| |
|
|
| T |
33869259 |
tagttgataggtaaactagagttagtagcttggttagaagttagttagagttagttacttaaactaatc-tctatatataggaacactattgtacgcatt |
33869357 |
T |
|
| Q |
255 |
catcatctttt |
265 |
Q |
| |
|
|| ||||||| |
|
|
| T |
33869358 |
cactatctttt |
33869368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 20985923 - 20985830
Alignment:
| Q |
259 |
atcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgat |
352 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||| || ||||||| |||||||||||| |||||| |||| | |||| ||||| ||||||| |
|
|
| T |
20985923 |
atcttttatcaatctattcatttctataatgaatttttataagtatctaccacatgagtactcttatgcttgcaaacttgattacatctatgat |
20985830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 24544757 - 24544818
Alignment:
| Q |
281 |
tctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgctta |
342 |
Q |
| |
|
||||| ||||||||||| ||||||||||| ||||||||| |||||| ||||| ||||||||| |
|
|
| T |
24544757 |
tctactatgagtttctatgagtatctccctcatgagtactcttatgcttgctttcttgctta |
24544818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 162; Significance: 2e-86; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 155 - 360
Target Start/End: Complemental strand, 17403001 - 17402796
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17403001 |
tagttgataagtaaactagagttagtagtttggttagaagttagttagagttagttactcaaactaatctcttatatataggaacactattgtactcatt |
17402902 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| |||||| || |
|
|
| T |
17402901 |
caatatcttttatcaatctattcatttctacaatgagtttctatgagtatctcccacatgagtactcttatgcttgctatcttgcttacatctatgactt |
17402802 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
17402801 |
ttctcc |
17402796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 186 - 360
Target Start/End: Original strand, 1140045 - 1140218
Alignment:
| Q |
186 |
ggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcattcatcatcttttatcaatctattcatttctac |
285 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1140045 |
ggttagaagttagttagagttagttactcaaactaatctct-atatataggaacactattgtactcattcatcatcttttatcaatctattcatttctac |
1140143 |
T |
|
| Q |
286 |
aatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgatttttctcc |
360 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||| |||||| ||||||||||||||||| |||||| |||||||| |
|
|
| T |
1140144 |
aatgagttactttgagtatctccctcatgagtactcttatgcttgctatcttgcttacatctatgacttttctcc |
1140218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 6789633 - 6789837
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
|||| ||||||| |||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||||| |
|
|
| T |
6789633 |
tagtggataagtgaactagagttagtagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaatactattgtactcatt |
6789731 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatc-ttgcttacagctatgatt |
353 |
Q |
| |
|
|| ||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||| |||||||| ||||||||| |||||| | |
|
|
| T |
6789732 |
cactatcttttttcaatctattca-ttctacaatgagtttctatgagtatctcccacatgagtactcttatgcttgctatctttgcttacatctatgact |
6789830 |
T |
|
| Q |
354 |
tttctcc |
360 |
Q |
| |
|
| ||||| |
|
|
| T |
6789831 |
tctctcc |
6789837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 9032822 - 9032763
Alignment:
| Q |
256 |
atcatcttttatc-aatctattcatttctacaatgagtttctaagagtatctcccacatga |
315 |
Q |
| |
|
||||||||||||| ||||||||| || |||| ||||||||||| | ||||||||||||||| |
|
|
| T |
9032822 |
atcatcttttatccaatctattcctt-ctactatgagtttctatgggtatctcccacatga |
9032763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 151; Significance: 8e-80; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 155 - 360
Target Start/End: Complemental strand, 20046715 - 20046509
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
20046715 |
tagttgataagtaaactagagttagtagtttggttagaagttagttagagttagttactcaaactaatctcttatatataggaacactattgtactcatt |
20046616 |
T |
|
| Q |
255 |
catcatc-ttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgatt |
353 |
Q |
| |
|
|| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| |||||| | |
|
|
| T |
20046615 |
caatatctttttatcaatctattcatttctacaatgagtttctatgagtatctcccacatgagtactcttatgcttgctatctcgcttacatctatgact |
20046516 |
T |
|
| Q |
354 |
tttctcc |
360 |
Q |
| |
|
||||||| |
|
|
| T |
20046515 |
tttctcc |
20046509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 44963176 - 44963380
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||| | || ||| |||||||||||||||||||| ||||||||||||| |||||| | ||||||||||||||||||||||||||| |
|
|
| T |
44963176 |
tagttgataagtaaactagggttagtagcttggttagaagttagttagagttagttactcaaattaatctct-atatataggaacactattgtactcatt |
44963274 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||| |||||| |||||||||| |||||| |||||| || |
|
|
| T |
44963275 |
catcatcttttatcaatctattcatttctacaatgaatttctttgagtatctccctcatgaatactcttatgcttgctatcttacttacatctatgactt |
44963374 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
44963375 |
ttctcc |
44963380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 4895597 - 4895801
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
4895597 |
tagttgataagtaaactagagttagtagtttggttagaagttagttagagttatttactcaaactaatc-tctatatataggaacactattgtactcatt |
4895695 |
T |
|
| Q |
255 |
catcatctttt-atcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgatt |
353 |
Q |
| |
|
||||||||||| |||||| |||||| ||| | ||| | |||| |||||||||||| |||||||| |||||||||||| ||||||||||| ||||||| |
|
|
| T |
4895696 |
catcatcttttaatcaatatattca-ttccaatatggatctctatgagtatctcccagatgagtactcttatgtttgctctcttgcttacatctatgatc |
4895794 |
T |
|
| Q |
354 |
tttctcc |
360 |
Q |
| |
|
||||||| |
|
|
| T |
4895795 |
tttctcc |
4895801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 155 - 360
Target Start/End: Complemental strand, 28124806 - 28124601
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
28124806 |
tagttgataagtaaactagagttagtagtttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcatt |
28124708 |
T |
|
| Q |
255 |
catcatctttt-atc-aatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgat |
352 |
Q |
| |
|
||||||||||| ||| ||| | |||| ||| | ||| | |||| ||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||| |
|
|
| T |
28124707 |
catcatcttttaatcaaatattttca-ttccaatatggatctctatgagtatctcccacatgagtactcttatgcttgctctcttgcttacatctatgat |
28124609 |
T |
|
| Q |
353 |
ttttctcc |
360 |
Q |
| |
|
||||||| |
|
|
| T |
28124608 |
ctttctcc |
28124601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 155 - 360
Target Start/End: Complemental strand, 28126633 - 28126428
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
28126633 |
tagttgataagtaaactagagttagtagtttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcatt |
28126535 |
T |
|
| Q |
255 |
catcatctttt-atc-aatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgat |
352 |
Q |
| |
|
||||||||||| ||| ||| | |||| ||| | ||| | |||| ||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||| |
|
|
| T |
28126534 |
catcatcttttaatcaaatattttca-ttccaatatggatctctatgagtatctcccacatgagtactcttatgcttgctctcttgcttacatctatgat |
28126436 |
T |
|
| Q |
353 |
ttttctcc |
360 |
Q |
| |
|
||||||| |
|
|
| T |
28126435 |
ctttctcc |
28126428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 241 - 360
Target Start/End: Complemental strand, 28014406 - 28014287
Alignment:
| Q |
241 |
ctattgtactcattcatcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||| ||||||||||||| |
|
|
| T |
28014406 |
ctattgtactcattattcatcttttatcaatctattcatttctacaatgagtttctatgagtatctcccacatgagcactcttatgcttgctatcttgct |
28014307 |
T |
|
| Q |
341 |
tacagctatgatttttctcc |
360 |
Q |
| |
|
|||| ||||||| ||||||| |
|
|
| T |
28014306 |
tacatctatgatctttctcc |
28014287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 37405668 - 37405559
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| |||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
37405668 |
tagttgatagataaactagagttagtagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcatt |
37405570 |
T |
|
| Q |
255 |
catcatctttt |
265 |
Q |
| |
|
|| ||||||| |
|
|
| T |
37405569 |
cactatctttt |
37405559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 25471904 - 25471784
Alignment:
| Q |
241 |
ctattgtactcattcatcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| || |||||||||||| |||||||||||| ||| || |||||| |||||||||| || |
|
|
| T |
25471904 |
ctattgtactcattattcatcttttatcaatctattcatttatataatgagtttctattagtatctcccacgtgaataatcttatgcttgctatctttct |
25471805 |
T |
|
| Q |
341 |
tacagctatgatttttctcct |
361 |
Q |
| |
|
|||| ||||||| |||||||| |
|
|
| T |
25471804 |
tacatctatgatctttctcct |
25471784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 357
Target Start/End: Original strand, 8405628 - 8405721
Alignment:
| Q |
264 |
ttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgatttttc |
357 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| || |||||||| ||||| ||| |||||| ||||||| ||||||||| |||||| |||| |
|
|
| T |
8405628 |
ttatcaatctagtcatttctacaatgagtttctacgattatctcccccatgaatactcttatgcttgctattttgcttacatatatgatctttc |
8405721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 4880288 - 4880343
Alignment:
| Q |
228 |
atatataggaacactattgtactcattcatcatcttttatcaatct-attcatttc |
282 |
Q |
| |
|
||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4880288 |
atatatatgaacaccattatactcattcatcatcttttatcaatctaattcatttc |
4880343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 138; Significance: 5e-72; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 30224243 - 30224447
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
30224243 |
tagttgataagtaaactagagttagtagcttggttagaagttagttagaggtagttactcaaactaatctct-atatataggaacactattgtactcatt |
30224341 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| |||||| ||||||||||||||||| |||||| || |
|
|
| T |
30224342 |
cattatcttttatcaatctattcatttctacaatgagttactttgagtatctccctcatgagtactcttatgcttgctatcttgcttacatctatgactt |
30224441 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
30224442 |
ttctcc |
30224447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 161 - 360
Target Start/End: Original strand, 25249025 - 25249223
Alignment:
| Q |
161 |
ataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcattcatcat |
260 |
Q |
| |
|
||||||||||||||| || ||| |||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||| || |
|
|
| T |
25249025 |
ataagtaaactagagttagtagcttggttagaagttagttaaaggtagttactcaaactaatctct-atatataggaacactattgtactcattcatgat |
25249123 |
T |
|
| Q |
261 |
cttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgatttttctcc |
360 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||| |
|
|
| T |
25249124 |
cttttatcaatctattcatttctacaatgagttactttgagtatctccctcatgagtacccttatgcttgctatcttgcttacatatatgacttttctcc |
25249223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 5567439 - 5567643
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| |||||||||| || ||| || |||||||||||||| || |||||||||||||||||||| | ||||||||||| ||||||||||||||| |
|
|
| T |
5567439 |
tagttgatagctaaactagagttagtagcttagttagaagttagttggagttagttactcaaactaatctct-atatataggaaaactattgtactcatt |
5567537 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| |||||| ||||||||||||||||| |||||| || |
|
|
| T |
5567538 |
catcatcttttatcaatctattcatttctacaatgagttactttgagtatctccctcatgagtactcttatgcttgctatcttgcttacatctatgactt |
5567637 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
5567638 |
ttctcc |
5567643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 155 - 361
Target Start/End: Original strand, 6428753 - 6428959
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || || || |||| |||||||||||| ||||||||||||||||||| | ||||||||||||||||||||| ||||| |
|
|
| T |
6428753 |
tagttgataagtaaactagagttagtaccttagttaaaagttagttagaggtagttactcaaactaatctct-atatataggaacactattgtaatcatt |
6428851 |
T |
|
| Q |
255 |
catcatctttta-tcaa-tctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgat |
352 |
Q |
| |
|
|||||||||||| |||| |||||||| | ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| |||||| |||||| |
|
|
| T |
6428852 |
catcatcttttaatcaaatctattcact-ctacaatgagtttctttgagtatctctcacatgagtactcttatgtttgctatcttacttacatctatgac |
6428950 |
T |
|
| Q |
353 |
ttttctcct |
361 |
Q |
| |
|
|| |||||| |
|
|
| T |
6428951 |
ttctctcct |
6428959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 340
Target Start/End: Complemental strand, 3379332 - 3379149
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| |||||||||| || |||||| ||||||||||||||||| ||||||||||||||||||| | ||||| ||||| ||||||||||||||| |
|
|
| T |
3379332 |
tagttgatagttaaactagagttagtagtttagttagaagttagttagagttagttactcaaactaatc-tctatattaaggaaaactattgtactcatt |
3379234 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|||||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||| |||| ||||| ||||||| |
|
|
| T |
3379233 |
catcattttttatcaatctattca-ttctataatgagtttctatgagtatctcccacatgagtacttttatacttgctttcttgct |
3379149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 155 - 360
Target Start/End: Complemental strand, 3375641 - 3375448
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||| | || ||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| ||||||||| |||| |
|
|
| T |
3375641 |
tagttgataagtaaactagggttagtagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaactctattgtacccatt |
3375543 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||||||| |||||| |||||| | |
|
|
| T |
3375542 |
cattatctttt-tcaatctattcatttctacaat----------gagtatctcccacatgagtactcttttgcttgctatcttacttacatctatgacct |
3375454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 155 - 340
Target Start/End: Complemental strand, 31032217 - 31032038
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||| | || ||| ||||||||||||||| | |||||||||||||||||||| | ||||||||||||| || | ||||||| |
|
|
| T |
31032217 |
tagttgataagtaaactagggttagtagcttggttagaagttag----agttagttactcaaactaatctct-atatataggaacattactacactcatt |
31032123 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
||| |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
31032122 |
catgatcttttatcaatctattcatt-ctataatgagtttctatgagtatctcccacatgagtactcttatgcttgctttcttgct |
31032038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 36536035 - 36535924
Alignment:
| Q |
170 |
ctagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcattcatcatcttttatca |
269 |
Q |
| |
|
|||||| || ||| |||||||||||||||||||| |||||||||||||||||||| | |||||||| || ||| |||||||||||||||||||||||||| |
|
|
| T |
36536035 |
ctagagttagtagcttggttagaagttagttagagttagttactcaaactaatctct-atatatagcaatactgttgtactcattcatcatcttttatca |
36535937 |
T |
|
| Q |
270 |
atctattcatttc |
282 |
Q |
| |
|
||||||||||||| |
|
|
| T |
36535936 |
atctattcatttc |
36535924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 340
Target Start/End: Original strand, 14939625 - 14939711
Alignment:
| Q |
253 |
ttcatcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||||||| |||||||| | |||||||||| | |||| ||||| ||||||| |
|
|
| T |
14939625 |
ttcatcatcttttatcaatctattcatt-ctataatgagtttctacgagtatcttctacatgagtactcatatgcttgctttcttgct |
14939711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 19473649 - 19473728
Alignment:
| Q |
260 |
tcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
19473649 |
tcttctatcaatctattcatt-ctataatgagtttctatgagtatctcccacatgagtactcttattcttgctttcttgct |
19473728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 19544574 - 19544653
Alignment:
| Q |
260 |
tcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
19544574 |
tcttctatcaatctattcatt-ctataatgagtttctatgagtatctcccacatgagtactcttattcttgctttcttgct |
19544653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 19588122 - 19588043
Alignment:
| Q |
260 |
tcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
19588122 |
tcttctatcaatctattcatt-ctataatgagtttctatgagtatctcccacatgagtactcttattcttgctttcttgct |
19588043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 36535922 - 36535865
Alignment:
| Q |
303 |
atctcccacatgagtacccttatgtttgctatcttgcttacagctatgatttttctcc |
360 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||| |||||| ||||||| |
|
|
| T |
36535922 |
atctcccacatgagtactcttatgcttgctatcttgcttacatctatgacctttctcc |
36535865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 14935590 - 14935646
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagtta |
211 |
Q |
| |
|
||||||||| ||||||||||| || || |||||||||||||||||||||||||||| |
|
|
| T |
14935590 |
tagttgataggtaaactagagttagtaacttggttagaagttagttagaattagtta |
14935646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 138; Significance: 5e-72; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 7040374 - 7040578
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
7040374 |
tagttgataagtaaactagagttagtagcttggttagaagttagttagaggtagttactcaaactaatctct-atatataggaacactattgtactcatt |
7040472 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| |||||| ||||||||||||||||| |||||| || |
|
|
| T |
7040473 |
cattatcttttatcaatctattcatttctacaatgagttactttgagtatctccctcatgagtactcttatgcttgctatcttgcttacatctatgactt |
7040572 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
7040573 |
ttctcc |
7040578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 155 - 360
Target Start/End: Complemental strand, 23564893 - 23564689
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
23564893 |
tagttgataagtaaactagagttagtagcttggttagaagttagttagaggtagttactcaaactaatctct-atatataggaacactattgtactcatt |
23564795 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| |||||| ||||||| ||||||||| |||||| || |
|
|
| T |
23564794 |
cattatcttttatcaatctattcatttctacaatgagttactttgagtatctccctcatgagtactcttatgcttgctattttgcttacatctatgactt |
23564695 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
23564694 |
ttctcc |
23564689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 18656121 - 18656325
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| |||||||||| || ||| || ||||||||||||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||| |
|
|
| T |
18656121 |
tagttgatagctaaactagagttagtagcttagttagaagttagttagagttagttactcaaactaatctct-atatataggaaaactattgtactcatt |
18656219 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| |||||| ||||||||||||||||| |||||| || |
|
|
| T |
18656220 |
catcatcttttatcaatctattcatttctacaatgagttactttgagtatctccctcatgagtactcttatgcttgctatcttgcttacatctatgactt |
18656319 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
18656320 |
ttctcc |
18656325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 52520614 - 52520819
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
52520614 |
tagttgataagtaaactagagttagtagtttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcatt |
52520712 |
T |
|
| Q |
255 |
catcatctttt-atc-aatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgat |
352 |
Q |
| |
|
||||||||||| ||| ||| | |||||||| | ||| | |||| ||||||||||||||||||||| |||||| ||||| |||| |||||| ||||||| |
|
|
| T |
52520713 |
catcatcttttaatcaaatattttcatttc-aatatggatctctatgagtatctcccacatgagtactcttatgcttgctctctttcttacatctatgat |
52520811 |
T |
|
| Q |
353 |
ttttctcc |
360 |
Q |
| |
|
||||||| |
|
|
| T |
52520812 |
ctttctcc |
52520819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 52518772 - 52518977
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||| | |
|
|
| T |
52518772 |
tagttgataagtaaactagagttagtagtttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactgttgtactcaat |
52518870 |
T |
|
| Q |
255 |
catcatctttt-atc-aatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgat |
352 |
Q |
| |
|
||||||||||| ||| ||| | |||| ||| | ||| | |||| ||||||||||||||||||| | |||||| ||||| ||||||||||| ||||||| |
|
|
| T |
52518871 |
catcatcttttaatcaaatattttca-ttccaatatggatctctatgagtatctcccacatgagttctcttatgcttgctctcttgcttacatctatgat |
52518969 |
T |
|
| Q |
353 |
ttttctcc |
360 |
Q |
| |
|
||||||| |
|
|
| T |
52518970 |
ctttctcc |
52518977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 168 - 332
Target Start/End: Original strand, 54296454 - 54296617
Alignment:
| Q |
168 |
aactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcattcatcatctttt-a |
266 |
Q |
| |
|
|||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
54296454 |
aactagagttagtagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcattcatgatcttttaa |
54296552 |
T |
|
| Q |
267 |
tcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgct |
332 |
Q |
| |
|
|||||| |||||||| || |||||||||||| ||||||||||| ||| ||||| |||||| ||||| |
|
|
| T |
54296553 |
tcaatcaattcattt-tataatgagtttctatgagtatctccctcatcagtactcttatgcttgct |
54296617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 23566567 - 23566449
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
|||||||||||||||||||| || ||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
23566567 |
tagttgataagtaaactagacttagtagcttggttagaagttagttagaggtagttactcaaactaatc-tctatatataggaacactattgtactcatt |
23566469 |
T |
|
| Q |
255 |
catcatcttttatcaatcta |
274 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
23566468 |
cattatcttttatcaatcta |
23566449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 23985787 - 23985946
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||| ||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
23985787 |
tagttgataggtaaactagagttagtagcttggttagaagttagttagagttagttattcaaactaatc-tctatatataggaacactattgtactcatt |
23985885 |
T |
|
| Q |
255 |
catcatcttttatc-aatctattcatttctacaatgagtttctaagagtatctcccacatga |
315 |
Q |
| |
|
|| ||||||||||| |||||||| | |||| | |||||| |||| | |||||||||||||| |
|
|
| T |
23985886 |
caccatcttttatcaaatctattga-ttctcctatgagtctctatggttatctcccacatga |
23985946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 3529365 - 3529251
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| |||||||| || || ||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
3529365 |
tagttgataggtaaactaaagttagtagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcatt |
3529267 |
T |
|
| Q |
255 |
catcatcttttatcaa |
270 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
3529266 |
cattatcttttatcaa |
3529251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 155 - 340
Target Start/End: Complemental strand, 52545319 - 52545137
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| ||||||||||| || ||| ||||||||||||| |||||| |||||||| ||| |||| || | ||||||||||||||| |||| ||||| |
|
|
| T |
52545319 |
tagttgataggtaaactagagttagtagcttggttagaagttggttagagttagttacacaa-ctaaactct-atatataggaacactcatgta-tcatt |
52545223 |
T |
|
| Q |
255 |
c-atcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|| |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||| | ||| ||||||| |
|
|
| T |
52545222 |
ttattatcttttatcaatctattcatt-ctataatgagtttctatgagtatctcccacatgagtactcttatgctcgctttcttgct |
52545137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 56074766 - 56074680
Alignment:
| Q |
254 |
tcatcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|||||||||||||||| |||||||||||||| || ||||||||| ||||||||||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
56074766 |
tcatcatcttttatcattctattcatttctataacgagtttctatgagtatctcccacatgagtactcttatgcttgctttcttgct |
56074680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 299 - 364
Target Start/End: Complemental strand, 23566444 - 23566379
Alignment:
| Q |
299 |
gagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgatttttctcctatg |
364 |
Q |
| |
|
||||||||||| |||| |||| |||||| ||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
23566444 |
gagtatctccctcatgggtactcttatgcttgctatcttgcttacatctatgacttttctcctatg |
23566379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 18395776 - 18395691
Alignment:
| Q |
241 |
ctattgtactcattcatcatcttttatca-atctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatg |
326 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||| | ||| |||||| | || ||||||||||||||||| ||| |||||| |
|
|
| T |
18395776 |
ctattgtactcattcactatcttttatcatatctattca-ctatactatgagtctatatgagtatctcccacatgaatactcttatg |
18395691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 138; Significance: 5e-72; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 29758133 - 29758337
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
29758133 |
tagttgataagtaaactagagttagtagcttggttagaagttagttagaggtagttactcaaactaatctct-atatataggaacactattgtactcatt |
29758231 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| |||||| ||||||||||||||||| |||||| || |
|
|
| T |
29758232 |
cattatcttttatcaatctattcatttctacaatgagttactttgagtatctccctcatgagtactcttatgcttgctatcttgcttacatctatgactt |
29758331 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
29758332 |
ttctcc |
29758337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 231 - 319
Target Start/End: Complemental strand, 8759207 - 8759119
Alignment:
| Q |
231 |
tataggaacactattgtactcattcatcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtac |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
8759207 |
tataggaacactattgtactcattcatcatcttttatcaatctgttcatttctacaatgagtttctttgagtatctccctcatgagtac |
8759119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 241 - 340
Target Start/End: Complemental strand, 18612174 - 18612074
Alignment:
| Q |
241 |
ctattgtactcattcatcat-cttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgc |
339 |
Q |
| |
|
|||||||||||| |||| || |||||||||||||||||||||||| ||||||||| | | |||||||||||||||||| |||||| ||||| |||||| |
|
|
| T |
18612174 |
ctattgtactcaatcattatacttttatcaatctattcatttctataatgagtttttgtaaatatctcccacatgagtactcttatgcttgctttcttgc |
18612075 |
T |
|
| Q |
340 |
t |
340 |
Q |
| |
|
| |
|
|
| T |
18612074 |
t |
18612074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 20516103 - 20516061
Alignment:
| Q |
214 |
caaactaatcttttatatataggaacactattgtactcattcat |
257 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
20516103 |
caaactaat-ttttatatataagaacactattgtactcattcat |
20516061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 17148710 - 17148670
Alignment:
| Q |
292 |
tttctaagagtatctcccacatgagtacccttatgtttgct |
332 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
17148710 |
tttctatgagtatctcccacatgagtactgttatgtttgct |
17148670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 155 - 360
Target Start/End: Original strand, 17449324 - 17449527
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||| | || ||| || ||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
17449324 |
tagttgataagtaaactagggttagtagcttcgttagaagttagttagagttagttactcaaactaatctct-atatataggaacactattgtactcatt |
17449422 |
T |
|
| Q |
255 |
catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgattt |
354 |
Q |
| |
|
||| ||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| ||| || ||||||||||||||||| |||||| | |
|
|
| T |
17449423 |
cattatctttt-tcaatctattcatgtctacaatgagattctatgagtatctcccacatgagtactcttttgcttgctatcttgcttacatctatgacct |
17449521 |
T |
|
| Q |
355 |
ttctcc |
360 |
Q |
| |
|
|||||| |
|
|
| T |
17449522 |
ttctcc |
17449527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 155 - 360
Target Start/End: Complemental strand, 16808797 - 16808592
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| |
|
|
| T |
16808797 |
tagttgataagtaaactagagttagtagtttggttagaagttagttagagttagttactcaaactaatc-tctatatatatgaacactattgtactcatt |
16808699 |
T |
|
| Q |
255 |
catcatctttt-atc-aatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgat |
352 |
Q |
| |
|
||||||||||| ||| ||| | |||| ||| | ||| | |||| |||||||||| |||||||||| |||||| ||||| ||||||||||| ||||||| |
|
|
| T |
16808698 |
catcatcttttaatcaaatattttca-ttccaatatggatctctatgagtatctccgacatgagtactcttatgcttgctctcttgcttacatctatgat |
16808600 |
T |
|
| Q |
353 |
ttttctcc |
360 |
Q |
| |
|
||||||| |
|
|
| T |
16808599 |
ctttctcc |
16808592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 9312042 - 9312151
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
9312042 |
tagttgataggtaaactagagttagtagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcatt |
9312140 |
T |
|
| Q |
255 |
catcatctttt |
265 |
Q |
| |
|
||| ||||||| |
|
|
| T |
9312141 |
cattatctttt |
9312151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 3282814 - 3282923
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
3282814 |
tagttgataggtaaactagagttagtagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcatt |
3282912 |
T |
|
| Q |
255 |
catcatctttt |
265 |
Q |
| |
|
|| ||||||| |
|
|
| T |
3282913 |
cactatctttt |
3282923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 3284515 - 3284624
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
3284515 |
tagttgataggtaaactagagttagtagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcatt |
3284613 |
T |
|
| Q |
255 |
catcatctttt |
265 |
Q |
| |
|
|| ||||||| |
|
|
| T |
3284614 |
cactatctttt |
3284624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 9310425 - 9310534
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||||| |||| | |||||||||||||||||||||||||||| |
|
|
| T |
9310425 |
tagttgataagtaaactagagttagtagcttggttagaagttagttagagttagttactcaaattaat-atctatatataggaacactattgtactcatt |
9310523 |
T |
|
| Q |
255 |
catcatctttt |
265 |
Q |
| |
|
||| ||||||| |
|
|
| T |
9310524 |
cattatctttt |
9310534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 188 - 349
Target Start/End: Original strand, 48941646 - 48941810
Alignment:
| Q |
188 |
ttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcattcatcatctttt-atc-aatctattcatttc--t |
283 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||| | |||| ||| |||||||||||||||||||| ||||||| ||| |||||||||||||| | |
|
|
| T |
48941646 |
ttagaagttagttagagttggttactcaaactaatc-tctatacatataaacactattgtactcattcagtatcttttaatcaaatctattcatttctat |
48941744 |
T |
|
| Q |
284 |
acaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctat |
349 |
Q |
| |
|
| ||||||||| || ||||||||| ||||||| ||| ||||| ||||| ||||||||||| |||| |
|
|
| T |
48941745 |
ataatgagtttatatgagtatctctcacatgaatactcttatacttgctctcttgcttacatctat |
48941810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 5924932 - 5924828
Alignment:
| Q |
227 |
tatatataggaacactattgtactcattcatcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatg |
326 |
Q |
| |
|
|||||||| ||||||| |||| | |||||||||||||||||||||||||| ||||| |||||||||||| |||||||||| | |||| ||| |||||| |
|
|
| T |
5924932 |
tatatataagaacactcgtgtattatttcatcatcttttatcaatctattca-ttctataatgagtttctatgagtatctcctatatgaatactcttatg |
5924834 |
T |
|
| Q |
327 |
tttgct |
332 |
Q |
| |
|
||||| |
|
|
| T |
5924833 |
cttgct |
5924828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 37664773 - 37664704
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatct |
224 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
37664773 |
tagttgataggtaaactagagttagtagcttggttagaagttagttagagttagttattcaaactaatct |
37664704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 37674495 - 37674426
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatct |
224 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
37674495 |
tagttgataggtaaactagagttagtagcttggttagaagttagttagagttagttattcaaactaatct |
37674426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 37702199 - 37702268
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatct |
224 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
37702199 |
tagttgataggtaaactagagttagtagcttggttagaaattagttagagttagttattcaaactaatct |
37702268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 902090 - 902147
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttac |
212 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| |||||||| |
|
|
| T |
902090 |
tagttgataggtaaactagagttagtagcttggttagaagttagttagagttagttac |
902147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 5924992 - 5924946
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagtta |
201 |
Q |
| |
|
||||||||| ||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
5924992 |
tagttgataggtaaattagagttagtagtttggttagaagttagtta |
5924946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 9487458 - 9487535
Alignment:
| Q |
260 |
tcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
||||||||||||||||||| ||||||||||| | ||| ||||||||| ||||||| || |||||| ||||| ||||||| |
|
|
| T |
9487458 |
tcttttatcaatctattca-ttctacaatgaatctct--gagtatctctcacatgaataatcttatgcttgctttcttgct |
9487535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 48940689 - 48940726
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttaga |
192 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
48940689 |
tagttgataagtaaactagagttagtagtttggttaga |
48940726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 165 - 340
Target Start/End: Original strand, 58809 - 58982
Alignment:
| Q |
165 |
gtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcattcatcatcttt |
264 |
Q |
| |
|
||||||||||| || ||| |||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
58809 |
gtaaactagagttagtagcttggttagaagttagttagagttagttactcaaactaatctct-atatataggaacactattgtactcattcatcatcttt |
58907 |
T |
|
| Q |
265 |
tatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||| ||||||||||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
58908 |
tatcaatctattca-ttctataatgagtttctatgagtatctcccacatgagtactcttatgcttgctttcttgct |
58982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 155 - 340
Target Start/End: Original strand, 39158 - 39341
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||||||||||||||| || ||| |||||||||||||||||| | |||||||| ||| |||| || | ||||||||||||||| |||| ||||| |
|
|
| T |
39158 |
tagttgataagtaaactagagttagtagcttggttagaagttagttaaagttagttacacaa-ctaaactct-atatataggaacactcatgta-tcatt |
39254 |
T |
|
| Q |
255 |
-catcatcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgct |
340 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| |||| |||||| ||||||| |
|
|
| T |
39255 |
tcatcatcttttatcaatctattcatttctataatgagtttttatgagtatctcccacatgagtactcttaattttgctttcttgct |
39341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0251 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0251
Description:
Target: scaffold0251; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 158 - 265
Target Start/End: Original strand, 6242 - 6348
Alignment:
| Q |
158 |
ttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcattcat |
257 |
Q |
| |
|
|||||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
6242 |
ttgataggtaaactagagttagtagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattgtactcattcac |
6340 |
T |
|
| Q |
258 |
catctttt |
265 |
Q |
| |
|
||||||| |
|
|
| T |
6341 |
tatctttt |
6348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 39787277 - 39787177
Alignment:
| Q |
155 |
tagttgataagtaaactagagctactagtttggttagaagttagttagaattagttactcaaactaatcttttatatataggaacactattgtactcatt |
254 |
Q |
| |
|
||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||| |||||||| |
|
|
| T |
39787277 |
tagttgataggtaaactagagttagtagcttggttagaagttagttagagttagttactcaaactaatc-tctatatataggaacactattttactcatt |
39787179 |
T |
|
| Q |
255 |
ca |
256 |
Q |
| |
|
|| |
|
|
| T |
39787178 |
ca |
39787177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 193 - 316
Target Start/End: Complemental strand, 25076296 - 25076173
Alignment:
| Q |
193 |
agttagttagaattagttactcaaactaatcttttatatataggaaca-ctattgtactcattcatcatcttttatcaatctattcatttctacaatgag |
291 |
Q |
| |
|
||||||||||| | ||| | || ||||||||| | | ||||||||||| | ||||||||| ||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
25076296 |
agttagttagagtaagtcattccaactaatctct-agatataggaacaacaattgtactctttcatcatcttttatcaatatattcatttctataatgag |
25076198 |
T |
|
| Q |
292 |
tttctaagagtatctcccacatgag |
316 |
Q |
| |
|
|||||| || |||||| | |||||| |
|
|
| T |
25076197 |
tttctatgaatatctctctcatgag |
25076173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 193 - 316
Target Start/End: Complemental strand, 25134265 - 25134142
Alignment:
| Q |
193 |
agttagttagaattagttactcaaactaatcttttatatataggaaca-ctattgtactcattcatcatcttttatcaatctattcatttctacaatgag |
291 |
Q |
| |
|
||||||||||| | ||| | || ||||||||| | | ||||||||||| | ||||||||| ||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
25134265 |
agttagttagagtaagtcattccaactaatctct-agatataggaacaacaattgtactctttcatcatcttttatcaatatattcatttctataatgag |
25134167 |
T |
|
| Q |
292 |
tttctaagagtatctcccacatgag |
316 |
Q |
| |
|
|||||| || |||||| | |||||| |
|
|
| T |
25134166 |
tttctatgaatatctctctcatgag |
25134142 |
T |
|
Back To:
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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 20013030 - 20012959
Alignment:
| Q |
266 |
atcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttg |
338 |
Q |
| |
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||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| |||||| ||||| ||||| |
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|
| T |
20013030 |
atcaatcaattcatt-ctataatgagtttctatgagtatctcccacatgagtactcttatgcttgctttcttg |
20012959 |
T |
|
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Target: scaffold0189 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0189
Description:
Target: scaffold0189; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 19063 - 19162
Alignment:
| Q |
260 |
tcttttatcaatctattcatttctacaatgagtttctaagagtatctcccacatgagtacccttatgtttgctatcttgcttacagctatgatttttctc |
359 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||| ||| ||||||||||||||||| | |||| || |||||||||||||| |||||||||||||| |
|
|
| T |
19063 |
tcttttatcaatctattcatt-ctataatgagtttctatgagcatctcccacatgagtactcctatgctttctatcttgcttacatctatgatttttctc |
19161 |
T |
|
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