View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18227_high_25 (Length: 313)

Name: NF18227_high_25
Description: NF18227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18227_high_25
NF18227_high_25
[»] chr4 (10 HSPs)
chr4 (124-220)||(17326594-17326690)
chr4 (124-220)||(17321045-17321141)
chr4 (128-220)||(16574232-16574324)
chr4 (128-204)||(34660643-34660719)
chr4 (128-220)||(44705407-44705499)
chr4 (265-297)||(17281596-17281628)
chr4 (265-297)||(17370098-17370130)
chr4 (265-297)||(17371847-17371879)
chr4 (265-297)||(40198599-40198631)
chr4 (265-297)||(45618310-45618342)
[»] chr1 (18 HSPs)
chr1 (124-220)||(17977419-17977515)
chr1 (124-220)||(17976866-17976962)
chr1 (124-220)||(27815544-27815640)
chr1 (124-220)||(27816580-27816676)
chr1 (128-220)||(13074224-13074315)
chr1 (132-220)||(48857052-48857140)
chr1 (265-297)||(17976786-17976818)
chr1 (265-297)||(20722497-20722529)
chr1 (265-297)||(9774890-9774922)
chr1 (265-297)||(17977561-17977593)
chr1 (265-297)||(26863885-26863917)
chr1 (265-297)||(27264218-27264250)
chr1 (265-297)||(27815466-27815498)
chr1 (265-297)||(27816722-27816754)
chr1 (265-297)||(34934749-34934781)
chr1 (265-297)||(35721126-35721158)
chr1 (265-297)||(37395658-37395690)
chr1 (265-297)||(46075052-46075084)
[»] chr2 (7 HSPs)
chr2 (125-220)||(20245166-20245261)
chr2 (128-220)||(25283136-25283228)
chr2 (128-220)||(29794178-29794270)
chr2 (265-297)||(25979253-25979285)
chr2 (265-297)||(8809622-8809654)
chr2 (265-297)||(20245307-20245339)
chr2 (265-297)||(36837780-36837812)
[»] chr3 (7 HSPs)
chr3 (124-220)||(47433673-47433767)
chr3 (128-204)||(976899-976975)
chr3 (128-204)||(20488483-20488559)
chr3 (128-185)||(4707336-4707393)
chr3 (265-297)||(11914835-11914867)
chr3 (265-297)||(39820606-39820638)
chr3 (265-297)||(47433811-47433843)
[»] chr7 (8 HSPs)
chr7 (124-220)||(43869772-43869868)
chr7 (128-191)||(28462492-28462555)
chr7 (265-297)||(31848146-31848178)
chr7 (265-297)||(17066450-17066482)
chr7 (265-297)||(32197911-32197943)
chr7 (265-297)||(32544776-32544808)
chr7 (265-297)||(41693670-41693702)
chr7 (265-297)||(43869914-43869946)
[»] chr6 (5 HSPs)
chr6 (128-220)||(33131856-33131948)
chr6 (128-220)||(25439750-25439842)
chr6 (265-297)||(20897499-20897531)
chr6 (265-297)||(21953231-21953263)
chr6 (265-297)||(34998143-34998175)
[»] scaffold0002 (1 HSPs)
scaffold0002 (128-297)||(345762-345931)
[»] chr8 (12 HSPs)
chr8 (124-220)||(1377038-1377134)
chr8 (124-220)||(1385415-1385511)
chr8 (130-205)||(296986-297061)
chr8 (265-297)||(22272272-22272304)
chr8 (128-220)||(30123254-30123346)
chr8 (265-297)||(38658506-38658538)
chr8 (265-296)||(4182648-4182679)
chr8 (134-220)||(28875315-28875401)
chr8 (265-297)||(10717146-10717178)
chr8 (265-297)||(10718450-10718482)
chr8 (265-297)||(22534724-22534756)
chr8 (265-297)||(34904511-34904543)
[»] chr5 (4 HSPs)
chr5 (129-203)||(27098232-27098306)
chr5 (265-298)||(4565417-4565450)
chr5 (265-297)||(3936603-3936635)
chr5 (265-297)||(3954077-3954109)
[»] scaffold0599 (1 HSPs)
scaffold0599 (265-297)||(6586-6618)
[»] scaffold0517 (1 HSPs)
scaffold0517 (265-297)||(11524-11556)
[»] scaffold0001 (1 HSPs)
scaffold0001 (265-297)||(119618-119650)


Alignment Details
Target: chr4 (Bit Score: 93; Significance: 3e-45; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 17326594 - 17326690
Alignment:
Q  124 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17326594 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggccaaggaccttttt 17326690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 17321141 - 17321045
Alignment:
Q  124 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  17321141 gacatggctgccacatgtgcaaaatggaacagttagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggccaaggatcttttt 17321045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 16574232 - 16574324
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||||||| |||  |||| |||||| ||||||| ||||||||||  |||||||||  ||||||||||||   ||||||||||||    
T  16574232 tggctgccacatgtgcacaattaaacaatcagcaagtgacacctatgcaaaaagaagacacataagcaagaaagtgggcctaaggaccttttt 16574324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 34660643 - 34660719
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtgg 204  Q
    ||||||||||||| ||| |||  ||||||||||| ||||||||||||||||||| | |||||||  ||| |||||||    
T  34660643 tggctgccacatgagcataattaaacagtcagcaagtgacacatatgcaaaaataatacacataagcaaaaaagtgg 34660719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 44705499 - 44705407
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||||||| |||  ||||||||||| |||| || |||| |||||| |||||||||  |||||||| |||   ||||||||||||    
T  44705499 tggctgccacatgtgcataattaaacagtcagcaagtgatacctatgtaaaaataagacacataagcaagaaagcgggtctaaggaccttttt 44705407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 17281628 - 17281596
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||| ||||||||||||||||||    
T  17281628 accagggaccaaaatccaaattcgctatatttg 17281596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 17370130 - 17370098
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||| ||||||||||||||||||    
T  17370130 accagggaccaaaatccaaattcgctatatttg 17370098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 17371847 - 17371879
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||||| ||||||||    
T  17371847 accagggaccaaaacccaaattcgttatatttg 17371879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 40198631 - 40198599
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  40198631 accagggaccaaaacccaaactcgctatatttg 40198599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 45618342 - 45618310
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  45618342 accagggaccaaaacccaaactcgctatatttg 45618310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 7e-43; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 17977419 - 17977515
Alignment:
Q  124 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17977419 gacatggctgccacatgtgcaaaatgaaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggccaaggaccttttt 17977515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 17976962 - 17976866
Alignment:
Q  124 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  17976962 gacatggctgccacttgtgcaaaatgaaacagtcagcaggtgacacatatgcaaaaatcagacacatagataagaaagtggggccaaggaccttttt 17976866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 27815640 - 27815544
Alignment:
Q  124 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    |||||||||||||||| |||||| | |||||||||||| ||||||| || ||||||||| ||||||||| |||||||||||||  ||||||||||||    
T  27815640 gacatggctgccacatatgcaaatttgaacagtcagcacgtgacacgtaagcaaaaatctgacacataggcaagaaagtggggcgaaggaccttttt 27815544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 27816580 - 27816676
Alignment:
Q  124 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    |||||||||||||||| |||||| | |||||||||||| ||||||| || ||||||||| ||||||||| |||||||||||||  ||||||||||||    
T  27816580 gacatggctgccacatatgcaaatttgaacagtcagcacgtgacacgtaagcaaaaatctgacacataggcaagaaagtggggcgaaggaccttttt 27816676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 13074315 - 13074224
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||||||| |||  ||||||||||| ||||||| ||||||||||| ||||||||| | |||||||||||   ||||||||||||    
T  13074315 tggctgccacatgtgcacaattaaacagtcagcaagtgacacctatgcaaaaataagacacata-aaaagaaagtgggcctaaggaccttttt 13074224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 48857052 - 48857140
Alignment:
Q  132 tgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||| |||  ||||||||||| ||||||| ||||||||||| ||| |||||  ||||||||||||   ||||||||||||    
T  48857052 tgccacatgtgcacaattaaacagtcagcaagtgacacctatgcaaaaataagatacataagcaagaaagtgggcctaaggaccttttt 48857140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 17976818 - 17976786
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||||||||||||||    
T  17976818 accagggaccaaaacccaaattcgctatatttg 17976786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 20722529 - 20722497
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||||||||||||||    
T  20722529 accagggaccaaaacccaaattcgctatatttg 20722497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 9774890 - 9774922
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  9774890 accagggaccaaaacccaaactcgctatatttg 9774922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 17977561 - 17977593
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||| ||||||||||||||||||||||||||||    
T  17977561 accaaggaccaaaacccaaattcgctatatttg 17977593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 26863917 - 26863885
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    ||||||||||||||| |||||||||||||||||    
T  26863917 accagggaccaaaactcaaattcgctatatttg 26863885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 27264218 - 27264250
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  27264218 accagggaccaaaacccaaactcgctatatttg 27264250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 27815498 - 27815466
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||| ||||||||||    
T  27815498 accagggaccaaaacccaaattggctatatttg 27815466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 27816722 - 27816754
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||| ||||||||||    
T  27816722 accagggaccaaaacccaaattggctatatttg 27816754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 34934749 - 34934781
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||| ||||||||||||||||||||||||||||    
T  34934749 accaaggaccaaaacccaaattcgctatatttg 34934781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 35721158 - 35721126
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||||| ||||||||    
T  35721158 accagggaccaaaacccaaattcgttatatttg 35721126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 37395690 - 37395658
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    ||||||||||||||||||||| |||||||||||    
T  37395690 accagggaccaaaacccaaatacgctatatttg 37395658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 46075052 - 46075084
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  46075052 accagggaccaaaacccaaactcgctatatttg 46075084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 20245166 - 20245261
Alignment:
Q  125 acatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20245166 acatggctgccacatgagcaaaattgaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggccaaggaccttttt 20245261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 25283136 - 25283228
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||||||| |||  ||||||||||| ||||||| ||||||||||| |||||||||  ||||||||||||   ||||||||||||    
T  25283136 tggctgccacatgtgcacaattaaacagtcagcaagtgacacctatgcaaaaataagacacataagcaagaaagtgggcctaaggaccttttt 25283228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 29794178 - 29794270
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||||||| |||  ||||||||||| ||||||  ||||||||||| |||||||||  ||||||||||||   ||||||||||||    
T  29794178 tggctgccacatgtgcacaattaaacagtcagcaagtgacagctatgcaaaaataagacacataagcaagaaagtgggtctaaggaccttttt 29794270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 25979253 - 25979285
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||||||||||||||    
T  25979253 accagggaccaaaacccaaattcgctatatttg 25979285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 8809654 - 8809622
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||||| ||||||||    
T  8809654 accagggaccaaaacccaaattcgttatatttg 8809622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 20245307 - 20245339
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    ||||||||| |||||||||||||||||||||||    
T  20245307 accagggactaaaacccaaattcgctatatttg 20245339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 36837780 - 36837812
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  36837780 accagggaccaaaacccaaactcgctatatttg 36837812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 47433673 - 47433767
Alignment:
Q  124 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  47433673 gacatggctgccacatgagcaaaattgaacagtcaacaggtgacacgtatgcaaaaatcagacac--agacaagaaagtgggatcaaggaccttttt 47433767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 976975 - 976899
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtgg 204  Q
    |||||||| |||||||| |||  ||||||||||| ||||||| ||||||||||| |||||||||  |||||||||||    
T  976975 tggctgccgcatgtgcacaattaaacagtcagcaagtgacacctatgcaaaaataagacacataagcaagaaagtgg 976899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 20488559 - 20488483
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtgg 204  Q
    ||||||||||||||||| |||  |||| |||||| ||||||| |||||||||||||||||||||  ||| |||||||    
T  20488559 tggctgccacatgtgcacaattaaacaatcagcatgtgacacctatgcaaaaatcagacacataagcaataaagtgg 20488483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 4707336 - 4707393
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcaga 185  Q
    ||||||||||||||||| |||  |||||| |||| ||||||  |||||||||||||||    
T  4707336 tggctgccacatgtgcacaattaaacagttagcaagtgacatctatgcaaaaatcaga 4707393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 11914835 - 11914867
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||| ||||||||||||||||||||||||||    
T  11914835 accaggcaccaaaacccaaattcgctatatttg 11914867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 39820606 - 39820638
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  39820606 accagggaccaaaacccaaactcgctatatttg 39820638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 47433811 - 47433843
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    ||||||||||||||| |||||||||||||||||    
T  47433811 accagggaccaaaactcaaattcgctatatttg 47433843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 43869772 - 43869868
Alignment:
Q  124 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    |||||||||||||||| |||||| | |||||||||||| ||||||| || |||||| || ||||||||| |||||||||||||  ||||||||||||    
T  43869772 gacatggctgccacatatgcaaatttgaacagtcagcacgtgacacgtaagcaaaattctgacacataggcaagaaagtggggcgaaggaccttttt 43869868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 28462492 - 28462555
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacata 191  Q
    ||||||||||||||||| | |  ||||||||||| ||||||| ||||||||||| |||||||||    
T  28462492 tggctgccacatgtgcacagttaaacagtcagcaagtgacacctatgcaaaaataagacacata 28462555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 31848146 - 31848178
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||||||||||||||    
T  31848146 accagggaccaaaacccaaattcgctatatttg 31848178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 17066482 - 17066450
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  17066482 accagggaccaaaacccaaactcgctatatttg 17066450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 32197911 - 32197943
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||| ||||||||||||||||||||||||||||    
T  32197911 accaaggaccaaaacccaaattcgctatatttg 32197943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 32544776 - 32544808
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||| ||||||||||||||||||||||||||||    
T  32544776 accaaggaccaaaacccaaattcgctatatttg 32544808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 41693702 - 41693670
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    ||||||||||||||||||||||||| |||||||    
T  41693702 accagggaccaaaacccaaattcgccatatttg 41693670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 43869914 - 43869946
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||| ||||||||||    
T  43869914 accagggaccaaaacccaaattggctatatttg 43869946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 33131948 - 33131856
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||||||| |||  ||||||||||| ||||||| ||| ||||||| |||||||||  ||||||||||||   ||||||||||||    
T  33131948 tggctgccacatgtgcacaattaaacagtcagcaagtgacacttatacaaaaataagacacataagcaagaaagtgggcctaaggaccttttt 33131856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 25439842 - 25439750
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||||||||| |||  ||||||||||| ||||||| ||||||||||| ||||| |||  |||||||| |||   ||||||||||||    
T  25439842 tggctgccacatgtgcacaattaaacagtcagcaagtgacacctatgcaaaaataagacatataagcaagaaagcgggtctaaggaccttttt 25439750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 20897499 - 20897531
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    ||||||||||||||||||||||| |||||||||    
T  20897499 accagggaccaaaacccaaattcactatatttg 20897531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 21953263 - 21953231
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||| ||||||||||||||||||    
T  21953263 accagggaccaaaatccaaattcgctatatttg 21953231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 34998143 - 34998175
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  34998143 accagggaccaaaacccaaactcgctatatttg 34998175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 297
Target Start/End: Original strand, 345762 - 345931
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggacctttttnnnnnnn 227  Q
    ||||||||||||||||| |||  ||||||||||| |||||| || ||||||||| ||| |||||  |||||||||| |   ||||||||||||           
T  345762 tggctgccacatgtgcacaattaaacagtcagcaagtgacatatgtgcaaaaataagatacataagcaagaaagtgtgtctaaggacctttttaaaaaac 345861  T
Q  228 nnnnnnttttgcagggattgatttcaagannnnnnnnaccagggaccaaaacccaaattcgctatatttg 297  Q
          ||||||||||||||||||||| |        || ||||||||||||||||||||||||||||||    
T  345862 aaaaaattttgcagggattgatttcaaaaaaaaaattactagggaccaaaacccaaattcgctatatttg 345931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 1377134 - 1377038
Alignment:
Q  124 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    |||||||||||||| | |||||| | |||||||||||||||||||  || | ||||||  ||||||||| |||||||||||||  || |||||||||    
T  1377134 gacatggctgccacctatgcaaatttgaacagtcagcaggtgacatgtaagtaaaaatttgacacataggcaagaaagtggggcgaatgaccttttt 1377038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 1385415 - 1385511
Alignment:
Q  124 gacatggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    |||||||||||||| | |||||| | |||||||||||||||||||  || | ||||||  ||||||||| |||||||||||||  || |||||||||    
T  1385415 gacatggctgccacctatgcaaatttgaacagtcagcaggtgacaagtaagaaaaaatatgacacataggcaagaaagtggggcgaaagaccttttt 1385511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 296986 - 297061
Alignment:
Q  130 gctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggg 205  Q
    |||||| |||||||| |||  ||||||||||| ||||||| ||||||||||| |||||||||  ||||||||||||    
T  296986 gctgccgcatgtgcacaattaaacagtcagcaagtgacacctatgcaaaaataagacacataagcaagaaagtggg 297061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 22272272 - 22272304
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||||||||||||||    
T  22272272 accagggaccaaaacccaaattcgctatatttg 22272304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 30123346 - 30123254
Alignment:
Q  128 tggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    |||| |||||||||||| |||  |||| |||||| ||||||| ||||  |||||||||||||||  ||||| ||||||   ||||||||||||    
T  30123346 tggccgccacatgtgcacaattaaacaatcagcaagtgacacttatgggaaaatcagacacataagcaagagagtgggcctaaggaccttttt 30123254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 38658538 - 38658506
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||||||||||||||    
T  38658538 accagggaccaaaacccaaattcgctatatttg 38658506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 4182679 - 4182648
Alignment:
Q  265 accagggaccaaaacccaaattcgctatattt 296  Q
    ||||||||||||||||||||||||||||||||    
T  4182679 accagggaccaaaacccaaattcgctatattt 4182648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 28875315 - 28875401
Alignment:
Q  134 ccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtggggtcaaggaccttttt 220  Q
    ||||||||||| |||  || |||| ||| ||||||| ||| ||||||||| |||||||  ||||||||||||  |||| ||||||||    
T  28875315 ccacatgtgcacaattaaatagtctgcaagtgacacctatacaaaaatcaaacacataagcaagaaagtgggcccaagaaccttttt 28875401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 10717178 - 10717146
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  10717178 accagggaccaaaacccaaactcgctatatttg 10717146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 10718450 - 10718482
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  10718450 accagggaccaaaacccaaactcgctatatttg 10718482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 22534724 - 22534756
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  22534724 accagggaccaaaacccaaactcgctatatttg 22534756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 34904511 - 34904543
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||| ||||||||||||||||||||||||||    
T  34904511 accaggaaccaaaacccaaattcgctatatttg 34904543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 27098232 - 27098306
Alignment:
Q  129 ggctgccacatgtgcaaaatggaacagtcagcaggtgacacatatgcaaaaatcagacacatagacaagaaagtg 203  Q
    ||||||||| |||||| |||  ||||||||||| ||||||| |||| ||||||||||||||||  ||||||||||    
T  27098232 ggctgccacctgtgcataattaaacagtcagcaagtgacacctatgtaaaaatcagacacataagcaagaaagtg 27098306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 298
Target Start/End: Complemental strand, 4565450 - 4565417
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttgt 298  Q
    |||||||||||||||||||| |||||||||||||    
T  4565450 accagggaccaaaacccaaactcgctatatttgt 4565417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 3936635 - 3936603
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||| ||||||||||||    
T  3936635 accagggaccaaaacccaaactcgctatatttg 3936603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 3954109 - 3954077
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||||||||||||||||||||| ||||||||    
T  3954109 accagggaccaaaacccaaattcgatatatttg 3954077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 6586 - 6618
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    |||||| ||||||||||||||||||||||||||    
T  6586 accaggcaccaaaacccaaattcgctatatttg 6618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 11524 - 11556
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    ||||||||||||||||||||| |||||||||||    
T  11524 accagggaccaaaacccaaatacgctatatttg 11556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 119650 - 119618
Alignment:
Q  265 accagggaccaaaacccaaattcgctatatttg 297  Q
    ||||||||||||||| |||||||||||||||||    
T  119650 accagggaccaaaactcaaattcgctatatttg 119618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University