View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18227_low_22 (Length: 358)

Name: NF18227_low_22
Description: NF18227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18227_low_22
NF18227_low_22
[»] chr8 (45 HSPs)
chr8 (1-118)||(35067226-35067340)
chr8 (1-118)||(5574321-5574435)
chr8 (1-123)||(41639684-41639805)
chr8 (1-118)||(6440147-6440261)
chr8 (1-116)||(25830139-25830251)
chr8 (7-79)||(6972226-6972298)
chr8 (1-118)||(3413084-3413198)
chr8 (1-116)||(33539471-33539583)
chr8 (1-116)||(43715940-43716052)
chr8 (1-116)||(12655988-12656100)
chr8 (1-77)||(38675669-38675745)
chr8 (16-80)||(42619907-42619971)
chr8 (1-118)||(42786549-42786665)
chr8 (1-123)||(3270767-3270884)
chr8 (1-67)||(33279490-33279554)
chr8 (1-118)||(45405597-45405711)
chr8 (17-79)||(13970998-13971060)
chr8 (11-123)||(35792114-35792223)
chr8 (1-116)||(67054-67166)
chr8 (1-77)||(5740715-5740791)
chr8 (1-77)||(36612008-36612084)
chr8 (29-123)||(39453203-39453294)
chr8 (1-90)||(7777098-7777185)
chr8 (1-90)||(7814511-7814598)
chr8 (17-91)||(33100386-33100460)
chr8 (1-79)||(43285890-43285968)
chr8 (1-66)||(10902770-10902835)
chr8 (1-65)||(37754627-37754691)
chr8 (1-44)||(10692504-10692547)
chr8 (1-90)||(7795223-7795310)
chr8 (1-66)||(10839423-10839488)
chr8 (9-60)||(11584170-11584221)
chr8 (1-76)||(13106545-13106620)
chr8 (6-77)||(29025330-29025401)
chr8 (6-44)||(27325828-27325866)
chr8 (1-66)||(11253483-11253548)
chr8 (1-42)||(22719505-22719546)
chr8 (1-78)||(31249453-31249530)
chr8 (1-78)||(37133791-37133868)
chr8 (1-38)||(37942875-37942912)
chr8 (1-77)||(8671485-8671561)
chr8 (1-41)||(10592246-10592286)
chr8 (1-77)||(21526210-21526286)
chr8 (1-41)||(23754672-23754712)
chr8 (6-42)||(31597018-31597054)
[»] chr5 (37 HSPs)
chr5 (1-123)||(16690565-16690684)
chr5 (1-118)||(884507-884621)
chr5 (1-118)||(9168059-9168170)
chr5 (1-118)||(38493690-38493805)
chr5 (1-116)||(22098321-22098433)
chr5 (1-91)||(26686947-26687034)
chr5 (1-91)||(26956678-26956765)
chr5 (1-78)||(4088509-4088586)
chr5 (1-78)||(7287118-7287195)
chr5 (6-78)||(14051244-14051316)
chr5 (3-70)||(41699521-41699588)
chr5 (8-123)||(14321841-14321953)
chr5 (1-78)||(33958188-33958265)
chr5 (4-90)||(29687149-29687232)
chr5 (8-66)||(27487959-27488017)
chr5 (50-114)||(34940748-34940809)
chr5 (1-78)||(7076497-7076574)
chr5 (1-66)||(18660824-18660889)
chr5 (1-74)||(40364634-40364707)
chr5 (1-90)||(40829480-40829569)
chr5 (1-118)||(6758681-6758796)
chr5 (1-45)||(35634798-35634842)
chr5 (1-116)||(38293251-38293364)
chr5 (1-44)||(26791207-26791250)
chr5 (1-76)||(35567566-35567641)
chr5 (6-44)||(14923143-14923181)
chr5 (1-66)||(21156053-21156118)
chr5 (1-66)||(4719716-4719781)
chr5 (1-66)||(5168248-5168313)
chr5 (1-77)||(19844240-19844314)
chr5 (9-78)||(28306061-28306130)
chr5 (1-78)||(41321320-41321397)
chr5 (1-41)||(1671607-1671647)
chr5 (1-77)||(13309948-13310024)
chr5 (8-40)||(22972189-22972221)
chr5 (1-41)||(28467419-28467459)
chr5 (1-41)||(36739013-36739053)
[»] chr3 (66 HSPs)
chr3 (1-123)||(1436882-1437001)
chr3 (1-123)||(51698924-51699043)
chr3 (1-123)||(54099243-54099362)
chr3 (1-79)||(52714799-52714877)
chr3 (1-123)||(33796332-33796451)
chr3 (1-123)||(36755937-36756056)
chr3 (1-116)||(52485538-52485650)
chr3 (1-79)||(48353062-48353140)
chr3 (1-79)||(49021777-49021855)
chr3 (5-116)||(48944604-48944712)
chr3 (1-116)||(49761080-49761192)
chr3 (7-79)||(19150247-19150319)
chr3 (6-116)||(37894135-37894242)
chr3 (1-123)||(29780963-29781082)
chr3 (1-116)||(45186445-45186557)
chr3 (1-116)||(52100326-52100438)
chr3 (1-116)||(35376975-35377087)
chr3 (1-86)||(45657690-45657775)
chr3 (1-77)||(9311106-9311182)
chr3 (6-116)||(16479703-16479810)
chr3 (29-79)||(29916955-29917005)
chr3 (29-79)||(29966108-29966158)
chr3 (34-118)||(43720478-43720558)
chr3 (1-116)||(23868872-23868984)
chr3 (1-66)||(39630558-39630623)
chr3 (1-115)||(47742350-47742459)
chr3 (1-70)||(52963252-52963321)
chr3 (1-78)||(55322645-55322722)
chr3 (1-118)||(26452614-26452728)
chr3 (1-76)||(45711370-45711445)
chr3 (1-43)||(26014877-26014919)
chr3 (5-116)||(26772438-26772547)
chr3 (1-78)||(5244294-5244371)
chr3 (1-90)||(26550303-26550392)
chr3 (1-78)||(27541431-27541508)
chr3 (1-78)||(35597227-35597304)
chr3 (1-66)||(44813388-44813453)
chr3 (1-70)||(48287737-48287806)
chr3 (1-42)||(52326084-52326125)
chr3 (1-78)||(55361162-55361239)
chr3 (1-45)||(28700526-28700570)
chr3 (1-65)||(32186101-32186165)
chr3 (1-77)||(36907106-36907182)
chr3 (6-78)||(52939721-52939793)
chr3 (1-44)||(19149055-19149098)
chr3 (6-122)||(24095294-24095407)
chr3 (1-44)||(45000128-45000171)
chr3 (6-44)||(37302616-37302654)
chr3 (1-66)||(8847175-8847240)
chr3 (1-78)||(20547919-20547996)
chr3 (6-63)||(22237217-22237274)
chr3 (1-66)||(28539681-28539746)
chr3 (6-67)||(34592135-34592196)
chr3 (1-78)||(38926693-38926770)
chr3 (1-78)||(41505556-41505633)
chr3 (1-66)||(46623972-46624037)
chr3 (1-78)||(47472394-47472471)
chr3 (29-78)||(49780669-49780718)
chr3 (1-41)||(288791-288831)
chr3 (1-77)||(27511790-27511866)
chr3 (6-66)||(37056998-37057058)
chr3 (1-41)||(39338693-39338733)
chr3 (7-63)||(41443134-41443190)
chr3 (6-78)||(44856023-44856095)
chr3 (1-77)||(51136965-51137041)
chr3 (29-77)||(52564579-52564627)
[»] chr2 (49 HSPs)
chr2 (1-123)||(7084601-7084720)
chr2 (1-118)||(19843550-19843664)
chr2 (1-123)||(21738504-21738621)
chr2 (1-80)||(18737800-18737879)
chr2 (1-123)||(26290737-26290856)
chr2 (1-79)||(33616531-33616611)
chr2 (2-116)||(45420202-45420313)
chr2 (1-79)||(6336318-6336394)
chr2 (1-123)||(43658598-43658715)
chr2 (4-116)||(3771440-3771549)
chr2 (1-79)||(16799738-16799815)
chr2 (1-116)||(29449277-29449388)
chr2 (1-123)||(12070913-12071032)
chr2 (1-116)||(12784290-12784404)
chr2 (1-114)||(4657367-4657477)
chr2 (1-79)||(40599208-40599284)
chr2 (16-79)||(45259216-45259279)
chr2 (1-67)||(1040579-1040645)
chr2 (1-79)||(36774604-36774682)
chr2 (1-78)||(7663995-7664072)
chr2 (6-116)||(17999571-17999678)
chr2 (6-77)||(23690438-23690509)
chr2 (1-118)||(42532630-42532744)
chr2 (1-44)||(9194306-9194349)
chr2 (1-76)||(42430715-42430790)
chr2 (1-91)||(4138102-4138191)
chr2 (1-79)||(5361859-5361936)
chr2 (1-78)||(9207655-9207732)
chr2 (1-78)||(22416278-22416355)
chr2 (5-65)||(7648459-7648519)
chr2 (47-91)||(18982952-18982996)
chr2 (49-115)||(39309523-39309586)
chr2 (1-77)||(44977429-44977505)
chr2 (1-44)||(18254172-18254215)
chr2 (7-77)||(14255374-14255444)
chr2 (1-91)||(14328447-14328537)
chr2 (8-78)||(44287371-44287441)
chr2 (1-78)||(1907692-1907769)
chr2 (1-78)||(9647197-9647274)
chr2 (6-71)||(10216920-10216985)
chr2 (1-116)||(27490624-27490736)
chr2 (1-78)||(28494925-28495002)
chr2 (1-116)||(40700261-40700373)
chr2 (1-45)||(1352454-1352498)
chr2 (6-78)||(2076639-2076711)
chr2 (1-41)||(3838846-3838886)
chr2 (4-56)||(4061913-4061965)
chr2 (1-37)||(8427618-8427654)
chr2 (6-78)||(41195654-41195726)
[»] chr1 (56 HSPs)
chr1 (1-123)||(34817931-34818050)
chr1 (1-123)||(29359809-29359928)
chr1 (1-93)||(49570062-49570154)
chr1 (1-79)||(23665653-23665731)
chr1 (1-114)||(49020301-49020409)
chr1 (1-116)||(12999716-12999828)
chr1 (8-123)||(29877370-29877482)
chr1 (1-118)||(30745052-30745166)
chr1 (1-118)||(30766503-30766617)
chr1 (1-77)||(50242376-50242452)
chr1 (1-118)||(49446685-49446803)
chr1 (1-116)||(30973618-30973730)
chr1 (1-116)||(49931619-49931731)
chr1 (1-79)||(36750412-36750488)
chr1 (1-80)||(740880-740961)
chr1 (1-90)||(11947861-11947950)
chr1 (1-116)||(33076185-33076297)
chr1 (1-78)||(50775085-50775162)
chr1 (1-90)||(1689457-1689544)
chr1 (1-78)||(44723426-44723503)
chr1 (1-77)||(11597702-11597778)
chr1 (1-123)||(30519511-30519630)
chr1 (1-77)||(48261205-48261281)
chr1 (1-116)||(30536057-30536165)
chr1 (6-77)||(46100935-46101006)
chr1 (1-78)||(34768196-34768271)
chr1 (1-78)||(18434860-18434937)
chr1 (1-78)||(23645476-23645553)
chr1 (1-66)||(49065305-49065370)
chr1 (1-116)||(26501180-26501292)
chr1 (4-76)||(49559131-49559203)
chr1 (1-76)||(17652694-17652769)
chr1 (6-77)||(51571276-51571347)
chr1 (1-78)||(31088246-31088323)
chr1 (1-78)||(50726177-50726254)
chr1 (1-77)||(8454609-8454685)
chr1 (1-45)||(9988017-9988061)
chr1 (1-77)||(14983838-14983914)
chr1 (1-41)||(51080056-51080096)
chr1 (1-80)||(5771171-5771250)
chr1 (6-45)||(8828083-8828122)
chr1 (6-41)||(19055725-19055760)
chr1 (6-45)||(48470709-48470748)
chr1 (1-78)||(29359704-29359779)
chr1 (7-41)||(49647116-49647150)
chr1 (1-43)||(52576266-52576308)
chr1 (1-78)||(649834-649911)
chr1 (6-67)||(8846044-8846105)
chr1 (1-66)||(15082991-15083056)
chr1 (1-42)||(41677289-41677330)
chr1 (1-66)||(50149011-50149076)
chr1 (6-66)||(3981967-3982027)
chr1 (6-78)||(27464986-27465058)
chr1 (1-77)||(27533414-27533490)
chr1 (1-41)||(33100873-33100913)
chr1 (1-77)||(52437560-52437636)
[»] chr7 (45 HSPs)
chr7 (1-118)||(35822866-35822980)
chr7 (1-79)||(40854582-40854660)
chr7 (1-79)||(48145590-48145668)
chr7 (1-79)||(47954029-47954107)
chr7 (1-80)||(47012496-47012575)
chr7 (1-113)||(44496699-44496808)
chr7 (1-123)||(41430038-41430157)
chr7 (1-114)||(41590415-41590525)
chr7 (1-74)||(46260024-46260097)
chr7 (1-91)||(26018106-26018196)
chr7 (6-91)||(31398195-31398280)
chr7 (1-118)||(44651121-44651234)
chr7 (1-118)||(36352475-36352590)
chr7 (1-77)||(41590012-41590088)
chr7 (1-123)||(42584868-42584987)
chr7 (1-118)||(34507097-34507211)
chr7 (1-44)||(38861161-38861204)
chr7 (7-79)||(4225823-4225896)
chr7 (1-38)||(22540994-22541031)
chr7 (1-50)||(27568083-27568132)
chr7 (1-78)||(41018729-41018806)
chr7 (1-78)||(44895501-44895578)
chr7 (1-66)||(48062122-48062187)
chr7 (1-68)||(4292493-4292560)
chr7 (1-44)||(40112917-40112960)
chr7 (1-44)||(41989705-41989748)
chr7 (15-74)||(42552977-42553036)
chr7 (4-78)||(43482591-43482665)
chr7 (1-67)||(9363453-9363519)
chr7 (6-44)||(22918132-22918170)
chr7 (7-45)||(31467218-31467256)
chr7 (3-45)||(31711898-31711940)
chr7 (6-79)||(46829549-46829623)
chr7 (6-78)||(3062400-3062472)
chr7 (1-78)||(38956547-38956624)
chr7 (1-78)||(43159504-43159580)
chr7 (7-44)||(45420023-45420060)
chr7 (1-65)||(1504302-1504366)
chr7 (1-41)||(24532908-24532948)
chr7 (1-41)||(31445383-31445423)
chr7 (6-65)||(31844546-31844606)
chr7 (1-41)||(44189276-44189316)
chr7 (1-41)||(46095016-46095056)
chr7 (1-65)||(47356049-47356113)
chr7 (1-41)||(49069315-49069355)
[»] chr4 (51 HSPs)
chr4 (1-123)||(16019542-16019661)
chr4 (1-116)||(49585060-49585172)
chr4 (17-118)||(47015087-47015185)
chr4 (1-116)||(1795875-1795987)
chr4 (16-116)||(19165325-19165423)
chr4 (1-118)||(50980656-50980770)
chr4 (1-113)||(44257626-44257735)
chr4 (1-91)||(46665110-46665200)
chr4 (1-78)||(34757837-34757914)
chr4 (1-78)||(34759111-34759188)
chr4 (1-116)||(11546794-11546906)
chr4 (4-114)||(48649587-48649694)
chr4 (3-123)||(15522422-15522539)
chr4 (1-67)||(36123399-36123465)
chr4 (1-77)||(31559604-31559680)
chr4 (1-79)||(38792818-38792895)
chr4 (6-116)||(55609058-55609165)
chr4 (4-116)||(193601-193710)
chr4 (1-91)||(31574855-31574945)
chr4 (1-91)||(32223997-32224086)
chr4 (1-67)||(49372252-49372318)
chr4 (1-78)||(10250444-10250521)
chr4 (1-78)||(26732290-26732367)
chr4 (1-77)||(12595560-12595636)
chr4 (1-76)||(12387596-12387671)
chr4 (1-118)||(31468880-31468994)
chr4 (1-76)||(47288148-47288223)
chr4 (1-78)||(1627487-1627564)
chr4 (1-78)||(10474041-10474118)
chr4 (8-77)||(50831685-50831754)
chr4 (1-45)||(7632423-7632467)
chr4 (1-45)||(19232095-19232139)
chr4 (6-78)||(24575780-24575852)
chr4 (1-77)||(25221654-25221730)
chr4 (1-65)||(52430943-52431007)
chr4 (6-45)||(3316421-3316460)
chr4 (1-76)||(37997319-37997394)
chr4 (7-77)||(27371212-27371282)
chr4 (6-79)||(37514059-37514133)
chr4 (7-56)||(23853805-23853854)
chr4 (1-78)||(27051015-27051092)
chr4 (1-70)||(50633631-50633699)
chr4 (1-78)||(51986107-51986184)
chr4 (1-37)||(5249934-5249970)
chr4 (1-41)||(37297114-37297154)
chr4 (1-41)||(38134418-38134458)
chr4 (1-41)||(40348859-40348899)
chr4 (1-41)||(50721710-50721750)
chr4 (1-45)||(50890035-50890079)
chr4 (1-41)||(51324548-51324588)
chr4 (6-42)||(51852146-51852182)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-115)||(12563-12674)
[»] chr6 (28 HSPs)
chr6 (1-77)||(13423034-13423110)
chr6 (1-78)||(16328628-16328705)
chr6 (1-90)||(28630164-28630253)
chr6 (1-78)||(16337851-16337928)
chr6 (1-116)||(1376430-1376544)
chr6 (1-116)||(1384178-1384292)
chr6 (1-75)||(10944677-10944751)
chr6 (1-66)||(16352101-16352166)
chr6 (1-78)||(16367975-16368052)
chr6 (1-116)||(33651086-33651198)
chr6 (11-78)||(16332787-16332854)
chr6 (4-122)||(2688952-2689068)
chr6 (1-78)||(18737496-18737573)
chr6 (10-78)||(16365000-16365068)
chr6 (1-45)||(24900839-24900883)
chr6 (1-76)||(26595414-26595489)
chr6 (1-78)||(552858-552935)
chr6 (1-78)||(22079492-22079569)
chr6 (8-77)||(31883233-31883302)
chr6 (1-41)||(6271415-6271455)
chr6 (1-44)||(1156785-1156828)
chr6 (1-44)||(25811801-25811844)
chr6 (6-44)||(14818002-14818040)
chr6 (17-67)||(16336908-16336958)
chr6 (1-116)||(27612940-27613052)
chr6 (6-67)||(31869138-31869199)
chr6 (1-78)||(32316857-32316934)
chr6 (1-41)||(17551344-17551384)
[»] scaffold0662 (1 HSPs)
scaffold0662 (17-118)||(1226-1324)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-77)||(94811-94887)
[»] scaffold0687 (1 HSPs)
scaffold0687 (1-90)||(7125-7212)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-66)||(246726-246789)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-78)||(76548-76625)
[»] scaffold0519 (1 HSPs)
scaffold0519 (6-66)||(11852-11912)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-41)||(49360-49400)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-41)||(10929-10969)


Alignment Details
Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35067226 - 35067340
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||   ||||||    
T  35067226 ttatatttttactttctctctctattgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatgtggttgtcaa---ccaaat 35067322  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||||||||||||||    
T  35067323 tgatgttcaaataacatt 35067340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5574321 - 5574435
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||| |||||||| ||||| ||||||||  || |||||||||||||||||||||||||| ||||||||||||||||||   ||||||    
T  5574321 ttatatttttactttctttctctattattttgatttttgtgttaatacatacttttctttgtaaaaatatgggtgtcaatatagttgtcaa---ccaaat 5574417  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||||||||||||||    
T  5574418 tgatgttcaaataacatt 5574435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 41639805 - 41639684
Alignment:
Q  1 ttatatttttactttctctctct--attcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaa 98  Q
    |||||||||||||||||||||||  |||  |||| |||||||| |||||||||||||||||||||||||||||||||||||  | ||||||||   ||||    
T  41639805 ttatatttttactttctctctctctattgctttgatttttgtgtcaacacatacttttctttgtaaaaatatggttgtcaacgtggttgtcaa---ccaa 41639709  T
Q  99 attgatgttcaaataacattcctct 123  Q
    |||||||||||||||||||| ||||    
T  41639708 attgatgttcaaataacattgctct 41639684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 6440147 - 6440261
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||| | ||  |||| |||||||| ||| |||||||||||||||||||||||||||||||||| | ||||||||   |||| |    
T  6440147 ttatatttttactttctctctttcttgctttgatttttgtgtcaatacatacttttctttgtaaaaatatggttgtcaatttggttgtcaa---ccaagt 6440243  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||||||||||||||    
T  6440244 tgatgttcaaataacatt 6440261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25830251 - 25830139
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| | |||||||||| |||||||||||||||||||||| |||||||| || ||||||| ||    |||||    
T  25830251 ttatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatgtggttgtccatttagttgttaa---acaaat 25830155  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  25830154 tgatgttcaaataaca 25830139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 6972226 - 6972298
Alignment:
Q  7 ttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6972226 ttttattttctctctctattgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 6972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 3413198 - 3413084
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||| | ||||||  ||||||||||||||||| ||||  |||||||||||||||||||  ||||||| | ||||||||   ||||||    
T  3413198 ttatatttttactttctttttctattgctttggtttttgtgccaatacatgattttctttgtaaaaatatgactgtcaatgttgttgtcaa---ccaaat 3413102  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||||||||||||||    
T  3413101 tgatgttcaaataacatt 3413084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 33539471 - 33539583
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    |||||||||||||| |||||||||||  |||| | |||||||||| ||||||||||||||| |||||| |||||||| || ||||||||||    |||||    
T  33539471 ttatatttttacttactctctctattactttgatatttgtgccaatacatacttttctttgaaaaaatgtggttgtccatttagttgtcaa---gcaaat 33539567  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  33539568 tgatgttcaaataaca 33539583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 43715940 - 43716052
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| | ||||| |||| ||||||||||||| |||||||| |||||||| || ||||||||||    |||||    
T  43715940 ttatatttttactttctctctctattactttgatatttgtaccaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaa---gcaaat 43716036  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  43716037 tgatgttcaaataaca 43716052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12655988 - 12656100
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||  ||||||||||||  |||||||||||||||||||| ||||||||| || | ||||||||    |||||    
T  12655988 ttatatttttactttctctctctattactttcatttttgtgccaatgcatacttttctttgtaaaaacatggttgtctatttggttgtcaa---gcaaat 12656084  T
Q  101 tgatgttcaaataaca 116  Q
     |||||||||||||||    
T  12656085 agatgttcaaataaca 12656100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 38675669 - 38675745
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| ||||  ||||||||||    
T  38675669 ttatatttttactttctctctctatttctttggtttttgtgccaatacatacttttctttttaaagttatggttgtc 38675745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 42619971 - 42619907
Alignment:
Q  16 ctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaat 80  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42619971 ctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaat 42619907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 42786665 - 42786549
Alignment:
Q  1 ttatatttttacttt--ctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaa 98  Q
    |||||||||||||||  |||||||| ||  |||| |||||||||||| ||||| ||||||||||||||  ||| |||||||| | ||||||||   ||||    
T  42786665 ttatatttttactttttctctctctctttctttgatttttgtgccaatacatatttttctttgtaaaatcatgattgtcaatttggttgtcaa---ccaa 42786569  T
Q  99 attgatgttcaaataacatt 118  Q
     |||||||||||||||||||    
T  42786568 gttgatgttcaaataacatt 42786549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 3270884 - 3270767
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||  |||||||||||  |  |||| ||||||||||||  ||||||||| ||| ||||| ||||||||||||| ||||||||||   |||| |    
T  3270884 ttatatttttgttttctctctct--tgctttgatttttgtgccaatccatacttttgtttataaaattatggttgtcaatttagttgtcaa---ccaagt 3270790  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  3270789 tgatgttcaaataacattactct 3270767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33279554 - 33279490
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaa 67  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||| |||||    
T  33279554 ttatatttttactttctctctctattgttctggtttttgtgccaacacat--ttttctttgcaaaaa 33279490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 45405597 - 45405711
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| |||| ||| ||| | ||  |||||||||||||||||| |||||| || | ||||||||    || ||    
T  45405597 ttatatttttactttctctctctattgctttgattttcgtgtcaatatatgattttctttgtaaaaatatagttgtccatgtggttgtcaa---tcacat 45405693  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||||||||||||||    
T  45405694 tgatgttcaaataacatt 45405711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 13970998 - 13971060
Alignment:
Q  17 tctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||  |||| ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  13970998 tctctctattgctttgatttttgtgccaacacatgcttttctttataaaaatatggttgtcaa 13971060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 35792114 - 35792223
Alignment:
Q  11 actttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatgttcaa 110  Q
    ||||||||||||||||  |||| | |||||||||| |||||||||| ||  ||||||| |||||||| || ||||||||||    ||||||| |||||||    
T  35792114 actttctctctctattactttgatatttgtgccaatacatactttttttgataaaaatgtggttgtccatttagttgtcaa---gcaaattggtgttcaa 35792210  T
Q  111 ataacattcctct 123  Q
    |||||| ||||||    
T  35792211 ataacactcctct 35792223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 67166 - 67054
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||  ||||||||||  |||| | |||||||||| ||||  |||||||||||||||| |||||||| || | ||||||||    |||||    
T  67166 ttatatttttacttcttctctctattactttgatatttgtgccaatacatgattttctttgtaaaaatgtggttgtctatttggttgtcaa---gcaaat 67070  T
Q  101 tgatgttcaaataaca 116  Q
    | ||||||||||||||    
T  67069 taatgttcaaataaca 67054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5740791 - 5740715
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| ||||||||||||||||||||| |||||||||||||| | | || |  |||||||||||||| ||||||||||    
T  5740791 ttatgtttttactttctctctctattgttttggtttttgtgtcgatacctctttttctttgtaaaattatggttgtc 5740715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36612084 - 36612008
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||||| |||||||||||| | ||||  |||| ||||||||||||||||||||||| |||  |||||||||||||||    
T  36612084 ttatatatttactttctctttttattactttgatttttgtgccaacacatacttttatttaaaaaaatatggttgtc 36612008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 39453294 - 39453203
Alignment:
Q  29 tttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatgttcaaataacattcctct 123  Q
    |||| ||||| || ||| ||||| ||||||||||||||||||| |||||||| | ||||||||    ||||||||||||||||||||||| ||||    
T  39453294 tttgatttttctgtcaatacataattttctttgtaaaaatatgattgtcaatgtggttgtcaa---tcaaattgatgttcaaataacattgctct 39453203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7777185 - 7777098
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtca 90  Q
    ||||||||||||||||||||||||||  |||| | ||||||  ||  |||||||||||||||  |||| ||||||||||| |||||||||    
T  7777185 ttatatttttactttctctctctattactttgatatttgtgttaatgcatacttttctttgt--aaatgtggttgtcaatttagttgtca 7777098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7814598 - 7814511
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtca 90  Q
    ||||||||||||||||||||||||||  |||| | ||| || |||  |||||||||||||||  |||| ||||||||||| |||||||||    
T  7814598 ttatatttttactttctctctctattactttgatatttatgtcaatgcatacttttctttgt--aaatgtggttgtcaatttagttgtca 7814511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 33100460 - 33100386
Alignment:
Q  17 tctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    ||||||||||  |||| |||||||| ||| ||||||||||||||||||||||| ||||||| || | ||||||||    
T  33100460 tctctctattactttgatttttgtgtcaatacatacttttctttgtaaaaataaggttgtctatttggttgtcaa 33100386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43285968 - 43285890
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||||||||||||| ||||  |||||||||| |  ||| ||||| |||||||| ||||||||| ||||||||    
T  43285968 ttatatttttactttctctctttattgctttggtttttatatcaatacatatttttctttctaaaaatatagttgtcaa 43285890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10902770 - 10902835
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||||||||||||||||||  |||| |||||||||||| ||||  ||||||||||||||    
T  10902770 ttatgtttttactttctctctctattgctttgatttttgtgccaatacatcattttctttgtaaaa 10902835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37754627 - 37754691
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaa 65  Q
    |||| ||||||||||||||||||||| |||||||||  ||||||| || || |||||||||||||    
T  37754627 ttatgtttttactttctctctctattgttttggtttccgtgccaatacctatttttctttgtaaa 37754691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10692504 - 10692547
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  10692504 ttatctttttactttctctctctattgttttggtttttgtgcca 10692547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7795310 - 7795223
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtca 90  Q
    ||||||||||||||||||| ||||||  |||| | |||||| |||  |||||||||||||||  |||| | ||||||||| |||||||||    
T  7795310 ttatatttttactttctctttctattactttgatatttgtgtcaatgcatacttttctttgt--aaatgtagttgtcaatttagttgtca 7795223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10839488 - 10839423
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||||||||||| ||||||  ||||||||||||||||| |  || ||||||||||||||    
T  10839488 ttatgtttttactttctctatctattgctttggtttttgtgccaatatttaattttctttgtaaaa 10839423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 11584170 - 11584221
Alignment:
Q  9 ttactttctctctctattcttttggtttttgtgccaacacatacttttcttt 60  Q
    |||||||||||||||||| |||||||||| ||| ||| |||||| |||||||    
T  11584170 ttactttctctctctattgttttggttttcgtgtcaaaacatacatttcttt 11584221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13106545 - 13106620
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 76  Q
    |||||||||| |||||||||||||||  |||| |||||||| ||| || |  |||||||||||||  |||||||||    
T  13106545 ttatatttttgctttctctctctattgctttgctttttgtgtcaatacctctttttctttgtaaatttatggttgt 13106620  T

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Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 29025330 - 29025401
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||||| |||||||||||||  ||||||||||||| ||| || |  |||||||||||||| | ||||||||    
T  29025330 tttttaccttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtc 29025401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 27325828 - 27325866
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  27325828 tttttactttctctctctattgctttggtttttgtgcca 27325866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11253548 - 11253483
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||| ||||||||||||||  ||||||||||||| ||| || |  ||||||||||||||    
T  11253548 ttatctttttattttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaa 11253483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22719505 - 22719546
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgc 42  Q
    |||| |||||||||||||||||||||  ||||||||||||||    
T  22719505 ttatctttttactttctctctctattgctttggtttttgtgc 22719546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31249530 - 31249453
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  |||||||||||| |||  || |  ||| |||||||||| | |||||||||    
T  31249530 ttatctttttactttctctctctattgctttggtttttgtaccactacctcatttcctttgtaaaattttggttgtca 31249453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37133868 - 37133791
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||| ||||||  |||| |||||||| ||| | ||  |||||||||||||| | |||||||||    
T  37133868 ttatgtttttactttctctttctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtca 37133791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37942912 - 37942875
Alignment:
Q  1 ttatatttttactttctctctctattcttttggttttt 38  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  37942912 ttatatttttactttctctctctattgttttagttttt 37942875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8671561 - 8671485
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||||||||||||| ||||||||||  |||| |||||||  ||| | ||  |||| ||||||||||||||| ||||    
T  8671561 ttatatttttactttatctctctattactttgatttttgtatcaatatatttttttttttgtaaaaatatggctgtc 8671485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10592286 - 10592246
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||||||||||||||||||  |||||||||||||    
T  10592286 ttatgtttttactttctctctctattgctttggtttttgtg 10592246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21526286 - 21526210
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| |||||||||||||||| | ||  ||||| ||||||||||| || |  |||||||||| ||| ||||||||||    
T  21526286 ttatgtttttactttctctctttgttgctttggattttgtgccaatacctctttttctttgtgaaattatggttgtc 21526210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23754712 - 23754672
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    ||||||||||||||| |||| ||||| ||||||||||||||    
T  23754712 ttatatttttactttatctcactattgttttggtttttgtg 23754672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 31597018 - 31597054
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgc 42  Q
    |||||||||| |||||||||| |||||||||||||||    
T  31597018 tttttactttatctctctattgttttggtttttgtgc 31597054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 5e-38; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 16690565 - 16690684
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||   ||||||    
T  16690565 ttatatttttactttctttctctattgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatgtggttgtcaa---ccaaat 16690661  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||| ||||||||||||| ||||    
T  16690662 tgatattcaaataacattgctct 16690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 884507 - 884621
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||| |||||  |||||||   | ||||    
T  884507 ttatatttttactttctctttctattgttttgatttttgtgccaacacatacttttcattgtaaaaatatggttgttaatatgattgtcaa---ctaaat 884603  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||||||||||||||    
T  884604 tgatgttcaaataacatt 884621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9168170 - 9168059
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||| |||||||||  |||  |||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||   ||||||    
T  9168170 ttatatttttattttctctct--attgctttggtttttgtgccaacacatacttttctttgt-aaaatatgattgtcaatatggttgtcaa---ccaaat 9168077  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||||||||||||||    
T  9168076 tgatgttcaaataacatt 9168059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 38493690 - 38493805
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttt-tgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaa 99  Q
    ||||| ||||||||| ||||||||||  |||| |||| ||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||   |||||    
T  38493690 ttataattttactttatctctctattgctttgattttttgtgccaacacatacttttctttgttaaaatatgggtgtcaatgtggttgtcaa---ccaaa 38493786  T
Q  100 ttgatgttcaaataacatt 118  Q
    |||||||||||||||||||    
T  38493787 ttgatgttcaaataacatt 38493805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22098321 - 22098433
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| | |||||||||| |||||||||||||||||||||| |||||||| || || || ||||    |||||    
T  22098321 ttatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatgtggttgtccatttaattatcaa---gcaaat 22098417  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  22098418 tgatgttcaaataaca 22098433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26686947 - 26687034
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    |||||||||||||||||||||  ||| ||||| |||||||  ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  26686947 ttatatttttactttctctct--attgttttgatttttgtatcaaca-atacttttctttgtaaaaatatggttgtcaatgtagttgtcaa 26687034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26956678 - 26956765
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    |||||||||||||||||||||  ||| ||||| |||||||  ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  26956678 ttatatttttactttctctct--attgttttgatttttgtatcaaca-atacttttctttgtaaaaatatggttgtcaatgtagttgtcaa 26956765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4088509 - 4088586
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||| ||||||||  ||||||||| |||| || |||||| |||||||||||||||||| ||||||    
T  4088509 ttatatttttactttctttctctattgctttggttttcgtgctaatacatacatttctttgtaaaaatatgattgtca 4088586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7287195 - 7287118
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||||||||||||||||||| |||||||||||||| ||  || |  |||||||||||||| | |||||||||    
T  7287195 ttatatttttactttctctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgtca 7287118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 14051316 - 14051244
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||||||| |||||||||||||||||  || |  |||||||||||||| | |||||||||    
T  14051316 tttttactttctctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtca 14051244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 41699521 - 41699588
Alignment:
Q  3 atatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatat 70  Q
    ||||||||||||||||||||||||  |||| |||| ||| ||| ||||| ||||||||||||||||||    
T  41699521 atatttttactttctctctctattaatttgattttcgtgtcaatacataattttctttgtaaaaatat 41699588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 14321953 - 14321841
Alignment:
Q  8 tttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatgtt 107  Q
    |||| ||||||||||||||  |||||||||  |  ||| ||||| |||||||||||||| |||||||||| |||| ||||||||     |||||||||||    
T  14321953 tttattttctctctctattgctttggttttcatatcaatacataattttctttgtaaaagtatggttgtccatatggttgtcaa---ttaaattgatgtt 14321857  T
Q  108 caaataacattcctct 123  Q
    ||||||| ||| ||||    
T  14321856 caaataaaattgctct 14321841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33958265 - 33958188
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||| |  |  |||||||||||||  |||||||||||    
T  33958265 ttatatttttactttctctctctattgctttggtttttgtgtcaatatctctttttctttgtaaatttatggttgtca 33958188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 29687149 - 29687232
Alignment:
Q  4 tatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtca 90  Q
    ||||||||||||||||||||||| ||||    |  ||| ||| |||||||||||||||||||||||| |||||| ||||| ||||||    
T  29687149 tatttttactttctctctctattgtttta---tacgtgtcaatacatacttttctttgtaaaaatatagttgtccatataattgtca 29687232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 27487959 - 27488017
Alignment:
Q  8 tttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||||||||||||||||||  ||||||||||||||||| |  || ||||||||||||||    
T  27487959 tttactttctctctctattgctttggtttttgtgccaatatttaattttctttgtaaaa 27488017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 34940748 - 34940809
Alignment:
Q  50 tacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatgttcaaataa 114  Q
    ||||||||||| |||||||||| |||||||| | ||||||||   ||||||||||||||||||||    
T  34940748 tacttttctttataaaaatatgattgtcaatgtggttgtcaa---ccaaattgatgttcaaataa 34940809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7076574 - 7076497
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  7076574 ttatttttttactttctctctctattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgtca 7076497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18660824 - 18660889
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||||||||||||||||||  ||||||||||||||||| || |  ||| ||||||||||    
T  18660824 ttatctttttactttctctctctattgctttggtttttgtgccaatacttcatttcctttgtaaaa 18660889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40364634 - 40364707
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggtt 74  Q
    |||||||| |||||||||||||||||  |||| |||||||||| |   |||||||||||| |||||| ||||||    
T  40364634 ttatatttctactttctctctctattactttgatttttgtgccgatgtatacttttctttctaaaaacatggtt 40364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40829480 - 40829569
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtca 90  Q
    ||||||||||||||| ||||||||||  |||  |||| |||| || |||||||||||||| | ||||| | ||||||||| | |||||||    
T  40829480 ttatatttttactttatctctctattactttaattttcgtgctaatacatacttttctttatgaaaatttagttgtcaatttggttgtca 40829569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6758796 - 6758681
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttg-taaaaatatggttgtcaatatagttgtcaacctccaaa 99  Q
    ||||||||||| ||| ||||||||||  ||||||||| ||| ||| ||||  |||||||||  ||||| ||||||||| || | ||||||||    || |    
T  6758796 ttatatttttattttatctctctattgctttggttttcgtgtcaatacatgattttctttgaaaaaaaaatggttgtccatgtggttgtcaa---tcata 6758700  T
Q  100 ttgatgttcaaataacatt 118  Q
    |||||||||||||||||||    
T  6758699 ttgatgttcaaataacatt 6758681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35634842 - 35634798
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaa 45  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||    
T  35634842 ttatctttttagtttctctctctattgttttggtttttgtgccaa 35634798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38293364 - 38293251
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaac--acatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaa 98  Q
    |||||||||||| |||||||||||||  |||| |||| |||||||   | ||||||||||||||||||| ||| ||||| || | ||||||||    |||    
T  38293364 ttatatttttaccttctctctctattactttgatttt-gtgccaatgtatatacttttctttgtaaaaacatgattgtctatttggttgtcaa---gcaa 38293269  T
Q  99 attgatgttcaaataaca 116  Q
    || |||||||||||||||    
T  38293268 atagatgttcaaataaca 38293251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26791250 - 26791207
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||| |||||||||||||||||||||  ||||||||||||||||    
T  26791250 ttatctttttactttctctctctattgctttggtttttgtgcca 26791207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 35567566 - 35567641
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 76  Q
    ||||||||||||||||||||||||||  ||||  ||||||| ||| || |  |||| ||||||||| |||||||||    
T  35567566 ttatatttttactttctctctctattgctttgaattttgtgtcaaaaccttattttatttgtaaaattatggttgt 35567641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 14923143 - 14923181
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  14923143 tttttactttctctctctattgctttggtttttgtgcca 14923181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21156053 - 21156118
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaa-cacatacttttctttgtaaaa 66  Q
    ||||||||| ||||||||| ||||||  ||||||||||||||||| ||| || ||||||||||||||    
T  21156053 ttatattttcactttctctttctattgctttggtttttgtgccaatcactta-ttttctttgtaaaa 21156118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4719716 - 4719781
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||||||| ||||||||||  |||| |||||||||||| || | |||||||||| ||||    
T  4719716 ttatgtttttactttttctctctattgctttgatttttgtgccaatactttcttttctttgcaaaa 4719781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5168248 - 5168313
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||||||||||||||||||  |||| |||||||||||  || |  ||||||||||||||    
T  5168248 ttatctttttactttctctctctattgctttgatttttgtgccactacctcattttctttgtaaaa 5168313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19844314 - 19844240
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| ||||||||||||||||  |||  |||||||| |||||||| || |  |||||||||||||| ||||||||||    
T  19844314 ttatgtttttactttctctct--attgctttggtttgtgtgccaatacctctttttctttgtaaaattatggttgtc 19844240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 28306130 - 28306061
Alignment:
Q  9 ttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||||  |||||| |||||||||  || |  |||||||||||||| | |||||||||    
T  28306130 ttactttctctctctattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgtca 28306061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41321320 - 41321397
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| ||| |||||||||||||||||  ||||||||||||| ||| || |  ||| |||||||||| | |||||||||    
T  41321320 ttatctttgtactttctctctctattactttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgtca 41321397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1671607 - 1671647
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||||||||||| |||||| ||||||||||||||    
T  1671607 ttatctttttactttctctttctattgttttggtttttgtg 1671647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 13309948 - 13310024
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| ||||||||||||||||||| |  |||||||||||||  || || |  |||||||||||||||| || |||||    
T  13309948 ttatgtttttactttctctctctactactttggtttttgtgttaatacctcattttctttgtaaaaatttgattgtc 13310024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 22972189 - 22972221
Alignment:
Q  8 tttactttctctctctattcttttggtttttgt 40  Q
    ||||||||||||||||||| |||||||||||||    
T  22972189 tttactttctctctctattgttttggtttttgt 22972221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28467459 - 28467419
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| ||||||||||||| ||||||| ||||||||||||||    
T  28467459 ttatctttttactttctcactctattgttttggtttttgtg 28467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36739013 - 36739053
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||||||||||||||||||  |||||||||||||    
T  36739013 ttatctttttactttctctctctattgctttggtttttgtg 36739053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 1436882 - 1437001
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||   ||||||    
T  1436882 ttatatttttactttctctctctattgttttattttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatgtggttgtaaa---ccaaat 1436978  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  1436979 tgatgttcaaataacattgctct 1437001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 51698924 - 51699043
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||   ||||||    
T  51698924 ttatatttttattttctctctctattgatttggtttttgtgccaacacatacttttctttgtaagaatatggttgtcaatgtggttgtcaa---ccaaat 51699020  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  51699021 tgatgttcaaataacattgctct 51699043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 54099362 - 54099243
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| ||||| |||||||| ||||||||||||||||||||||| |||||||| || |||||||   ||||||    
T  54099362 ttatatttttactttctctctctattgctttgatttttatgccaacatatacttttctttgtaaaaatatgattgtcaatgtaattgtcaa---ccaaat 54099266  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  54099265 tgatgttcaaataacattactct 54099243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 52714799 - 52714877
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  52714799 ttatatttttactttctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 52714877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 33796332 - 33796451
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| |||| |||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |  |||||||   ||||||    
T  33796332 ttatatttttactttttctccctattactttgatttttgtgccaacacatacttttctttataaaaatatggttgtcaatgtgattgtcaa---ccaaat 33796428  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||| ||||||||||||| ||||    
T  33796429 tgattttcaaataacattactct 33796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 36756056 - 36755937
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||| ||||||||||||||  |||| |||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||    |||||    
T  36756056 ttatatttttattttctctctctattgctttgatttttgtgccaacatatacttttctttgtaaaaatatggttgtcaatgtgattgtcaa---tcaaat 36755960  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||| ||||||||||||| ||||    
T  36755959 tgatattcaaataacattgctct 36755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 52485538 - 52485650
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| ||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||| ||   ||||||||    |||||    
T  52485538 ttatatttttactttatctctctattgctttggttttcgtgccaatacatacttttctttgtaaaaatatggttgtccattaggttgtcaa---acaaat 52485634  T
Q  101 tgatgttcaaataaca 116  Q
     |||||||||||||||    
T  52485635 agatgttcaaataaca 52485650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 48353062 - 48353140
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||||||||||||||||||| |||||||||| |||||||    
T  48353062 ttatatttttactttctctctctattgctttgatttttgtaccaacacatacttttctttataaaaatatgattgtcaa 48353140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49021777 - 49021855
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||| ||| |||||| |||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49021777 ttatatttttattttgtctctcaattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 49021855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 48944712 - 48944604
Alignment:
Q  5 atttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgat 104  Q
    ||||||||||||||||||||||  |||| | |||||||||| ||||| ||||||||||||||||||| ||||  || ||||||||||    |||||||||    
T  48944712 atttttactttctctctctattactttgatatttgtgccaatacatatttttctttgtaaaaatatgattgttcatttagttgtcaa---gcaaattgat 48944616  T
Q  105 gttcaaataaca 116  Q
    ||||||||||||    
T  48944615 gttcaaataaca 48944604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 49761192 - 49761080
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||| ||||||  |||| | |||||||||| ||||| |||||||||||||||| |||||||| || ||||||||||    |||||    
T  49761192 ttatatttttactttctctttctattactttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtccatttagttgtcaa---gcaaat 49761096  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||| ||||||||    
T  49761095 tgatgttgaaataaca 49761080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 19150319 - 19150247
Alignment:
Q  7 ttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    |||||||||||||||||||| ||||| |||||||| ||||| |||||||||||| ||||||||||||||||||    
T  19150319 ttttactttctctctctattgttttgatttttgtgtcaacaaatacttttctttataaaaatatggttgtcaa 19150247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 37894242 - 37894135
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatg 105  Q
    |||||||||||||||||||||  |||| | |||||| ||| ||||||||||||| |||||||| |||||||| || ||||||||||    ||||||||||    
T  37894242 tttttactttctctctctattactttgatatttgtgtcaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaa---gcaaattgatg 37894146  T
Q  106 ttcaaataaca 116  Q
    |||||||||||    
T  37894145 ttcaaataaca 37894135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 29780963 - 29781082
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| | |||||||| ||||| |||| ||||||| ||| |||||||||| |||||||||| ||||| ||||  |||||||    |||||    
T  29780963 ttatatttttactttttttctctattgttttgattttcgtgccaatacaaacttttctttataaaaatatgattgtccatatgattgtcaa---tcaaat 29781059  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||| ||||||||||| ||||    
T  29781060 tgatgtccaaataacattactct 29781082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 45186557 - 45186445
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| ||||  || ||| ||||||||||| |||||||| |||||||||| || | ||||||||    |||||    
T  45186557 ttatatttttactttctctctctattactttgattttcttgtcaatacatacttttcgttgtaaaagtatggttgtccatttggttgtcaa---acaaat 45186461  T
Q  101 tgatgttcaaataaca 116  Q
    |||||||| |||||||    
T  45186460 tgatgttcgaataaca 45186445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 52100326 - 52100438
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||| ||||||  |||| | ||| ||| || ||||| ||||||||||||||||||| ||||| || || |||||||    |||||    
T  52100326 ttatatttttactttctctttctattactttgatatttatgctaatacatatttttctttgtaaaaatatgattgtccatttaattgtcaa---gcaaat 52100422  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  52100423 tgatgttcaaataaca 52100438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 35377087 - 35376975
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    |||| |||||||||||| ||||||||  |||| |||||||||||| ||||  |||||||||||||| | |||||||||  | ||||||||   || ||||    
T  35377087 ttatgtttttactttctttctctattgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtca---tctaaat 35376991  T
Q  101 tgatgttcaaataaca 116  Q
     |||||||||||||||    
T  35376990 ggatgttcaaataaca 35376975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 45657775 - 45657690
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagtt 86  Q
    ||||||||||||||| ||||||||||  |||| | |||||||||| |||||||||||||| || |||| || |||||||| |||||    
T  45657775 ttatatttttactttttctctctattactttgatatttgtgccaatacatacttttctttatataaatgtgattgtcaatttagtt 45657690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9311106 - 9311182
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| ||||||||||||||| ||||| |||||||||| ||| ||| || ||||||||||| |||| |||||||||||    
T  9311106 ttatgtttttactttctctccctattgttttggttttcgtgtcaatacctacttttctttttaaatatatggttgtc 9311182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 16479703 - 16479810
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatg 105  Q
    |||||| ||||||||||||||  |||| |||| ||||||| ||||| ||||||||||||||| | ||||||| || | ||||||||    ||||| ||||    
T  16479703 tttttattttctctctctattactttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttggttgtcaa---gcaaatagatg 16479799  T
Q  106 ttcaaataaca 116  Q
    |||||||||||    
T  16479800 ttcaaataaca 16479810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 29917005 - 29916955
Alignment:
Q  29 tttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    |||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  29917005 tttgatttttgtgtcaacacatactttcctttgtaaaaatatggttgtcaa 29916955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 29966158 - 29966108
Alignment:
Q  29 tttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    |||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  29966158 tttgatttttgtgtcaacacatactttcctttgtaaaaatatggttgtcaa 29966108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 43720478 - 43720558
Alignment:
Q  34 tttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatgttcaaataacatt 118  Q
    |||||||||||||| |||||||||||| |||||||||| |||||||| | ||||||||   ||||||| ||||||||| ||||||    
T  43720478 tttttgtgccaaca-atacttttctttataaaaatatgattgtcaatgtggttgtcaa---ccaaattaatgttcaaagaacatt 43720558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23868984 - 23868872
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    |||| ||||||| |||| | |||||| ||||| |||||||||||| ||||  ||||| ||||||||||||| ||||| || | ||||||||    |||||    
T  23868984 ttatttttttacgttctttttctattattttgatttttgtgccaatacatttttttccttgtaaaaatatgattgtctatttggttgtcaa---gcaaat 23868888  T
Q  101 tgatgttcaaataaca 116  Q
     |||||||||||||||    
T  23868887 agatgttcaaataaca 23868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39630623 - 39630558
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    ||||||||||||||| | | |||||| ||||||||||||||| ||||| || ||||||||||||||    
T  39630623 ttatatttttactttttttgtctattattttggtttttgtgctaacacctaattttctttgtaaaa 39630558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 47742350 - 47742459
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||| |||||||||  |||  |||  ||||||| ||||||||||||| |||| |||||||||| ||||| ||| | ||||||||   ||||||    
T  47742350 ttatatttttaatttctctct--attgctttaatttttgttccaacacatacttctcttcgtaaaaatatagttgttaatgtggttgtcaa---ccaaat 47742444  T
Q  101 tgatgttcaaataac 115  Q
    || ||||||||||||    
T  47742445 tgctgttcaaataac 47742459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 52963321 - 52963252
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatat 70  Q
    ||||||||||||||||| | ||||||  ||| ||||||||| ||| ||||| ||||||||||||||||||    
T  52963321 ttatatttttactttctttttctattactttagtttttgtgtcaatacatatttttctttgtaaaaatat 52963252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 55322722 - 55322645
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| ||||||||||||||||||||| |||||||||  ||| | | ||||| |||||||||||||  |||||||||||    
T  55322722 ttatgtttttactttctctctctatttttttggtttccgtgtcgatacatatttttctttgtaaatttatggttgtca 55322645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26452728 - 26452614
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| |||   || ||| ||||  ||||||||||||||| ||| ||||| ||||| |||||||    || ||    
T  26452728 ttatatttttactttctctctctattgctttgatttccctgtcaatacatgattttctttgtaaaaagatgattgtccatataattgtcaa---tcacat 26452632  T
Q  101 tgatgttcaaataacatt 118  Q
    |||| |||||||||||||    
T  26452631 tgatattcaaataacatt 26452614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45711445 - 45711370
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 76  Q
    |||| ||||||||||||||||||||| |||||||| ||||| ||| || |  |||||||||||||| | |||||||    
T  45711445 ttatctttttactttctctctctattgttttggttattgtgtcaatacttcattttctttgtaaaattttggttgt 45711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26014877 - 26014919
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcc 43  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  26014877 ttatctttttactttctctctctattgttttggtttttgtgcc 26014919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 26772438 - 26772547
Alignment:
Q  5 atttttactttctctctctattcttttggtttttgtgccaacacatacttttc-tttgtaaaaatatggttgtcaatatagttgtcaacctccaaattga 103  Q
    ||||||| |||||||||||||| ||||| |||| ||| ||| ||||| ||||| |||||||||||| ||||||| || | | ||||||    ||||| ||    
T  26772438 atttttattttctctctctattattttgattttcgtgtcaatacatagttttcttttgtaaaaataaggttgtctatttggatgtcaa---acaaataga 26772534  T
Q  104 tgttcaaataaca 116  Q
    |||||||||||||    
T  26772535 tgttcaaataaca 26772547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5244294 - 5244371
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  5244294 ttatttttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtca 5244371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 26550303 - 26550392
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtca 90  Q
    ||||| ||||||||||||||||||||  |||  ||||||||| |  ||| |||||||||||||||||| || ||||| || | |||||||    
T  26550303 ttataattttactttctctctctattactttaatttttgtgctagtacacacttttctttgtaaaaatgtgattgtccatttggttgtca 26550392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27541508 - 27541431
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  27541508 ttatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtca 27541431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 35597227 - 35597304
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||  || |  ||| |||||||||| | |||||||||    
T  35597227 ttatttttttactttctctctctattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtca 35597304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44813453 - 44813388
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    ||||||||||||||| ||||||||||  ||||||||| ||| ||| ||||  ||||||||||||||    
T  44813453 ttatatttttactttatctctctattgctttggttttcgtgtcaatacatggttttctttgtaaaa 44813388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 48287737 - 48287806
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatat 70  Q
    ||||||||| | ||||||||||||||  |||| |||| |||| || ||||| ||||||||||||||||||    
T  48287737 ttatattttaattttctctctctattactttgattttcgtgctaatacatatttttctttgtaaaaatat 48287806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 52326084 - 52326125
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgc 42  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  52326084 ttatctttttactttctctctctattgttttggtttttgtgc 52326125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 55361239 - 55361162
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||| || |  |||||||||||||   ||||||||||    
T  55361239 ttatttttttactttctctctctattgctttggtttttgtgtcaatacttcattttctttgtaaatcaatggttgtca 55361162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28700526 - 28700570
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaa 45  Q
    |||| |||||||||||||||||||||  |||||||||||||||||    
T  28700526 ttatgtttttactttctctctctattgctttggtttttgtgccaa 28700570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32186101 - 32186165
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaa 65  Q
    ||||||||||||||| | |||||||| |||||||||| ||| |||  ||||||||| ||||||||    
T  32186101 ttatatttttactttatttctctattgttttggttttcgtgtcaatgcatacttttatttgtaaa 32186165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36907106 - 36907182
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||||||||  || ||||||||||||  |||| |||| |||| || |||||  ||||||||||||||||||||||||    
T  36907106 ttatattttctctctctctctctattactttgtttttcgtgcaaatacatatatttctttgtaaaaatatggttgtc 36907182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 52939721 - 52939793
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||||||||||||||  ||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  52939721 tttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtca 52939793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19149055 - 19149098
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||| |||||||||||||||| |||| |||||||||||||||||    
T  19149055 ttatctttttactttctctctttattgttttggtttttgtgcca 19149098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 24095407 - 24095294
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatactttt-ctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgat 104  Q
    |||||||||| | ||||||||  ||||||||| |||| || || ||||||| |||||||||  |||||||||||  | |||||||||||   |||| |||    
T  24095407 tttttactttatttctctattgctttggttttcgtgcaaatacctactttttctttgtaaat-tatggttgtcataaaagttgtcaacc---aaatggat 24095312  T
Q  105 gttcaaataacattcctc 122  Q
    |||||||||||| |||||    
T  24095311 gttcaaataacactcctc 24095294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45000128 - 45000171
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||| |||||||||||||||||||||  ||||||||||||||||    
T  45000128 ttatctttttactttctctctctattgatttggtttttgtgcca 45000171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 37302616 - 37302654
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  37302616 tttttactttctctctctattactttggtttttgtgcca 37302654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8847175 - 8847240
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||||||| ||| |||||| |||||||||||||||||| || |  |||| |||||||||    
T  8847175 ttatttttttactttttctttctattgttttggtttttgtgccaatacctcattttatttgtaaaa 8847240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20547996 - 20547919
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  |||| |||||||||||  || |  ||| |||||||||| | |||||||||    
T  20547996 ttatctttttactttctctctctattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtca 20547919  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 22237217 - 22237274
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgta 63  Q
    ||||||||||||||||||||| |||| ||||||||| ||| ||  | |||||||||||    
T  22237217 tttttactttctctctctattattttagtttttgtgtcaatacgaatttttctttgta 22237274  T

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Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28539746 - 28539681
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||||||||||||||||||  ||||  ||||||||||| ||||  ||||||||| ||||    
T  28539746 ttatgtttttactttctctctctattgctttgacttttgtgccaaaacatcattttctttgcaaaa 28539681  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 34592135 - 34592196
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaa 67  Q
    |||||| ||||||||| ||||  |||| |||| ||| ||| |||||||||||||||||||||    
T  34592135 tttttattttctctctttattactttgattttcgtgtcaatacatacttttctttgtaaaaa 34592196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38926693 - 38926770
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||  || |  ||| |||||||||| | |||||||||    
T  38926693 ttatctttttactttctctctctattgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgtca 38926770  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41505556 - 41505633
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||  || |  ||| |||||||||| | |||||||||    
T  41505556 ttatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtca 41505633  T

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Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 46623972 - 46624037
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||||||||||| |||||| |||||||||||||| ||  || |  ||||||||||||||    
T  46623972 ttatctttttactttctctttctattgttttggtttttgtgtcactacctcattttctttgtaaaa 46624037  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47472394 - 47472471
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||| || |||| ||||||||||||  || |  ||| |||||||||| | |||||||||    
T  47472394 ttatctttttactttctctctctgttgttttagtttttgtgccactacctcatttcctttgtaaaattttggttgtca 47472471  T

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Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 49780718 - 49780669
Alignment:
Q  29 tttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||| || | ||||||||||||||  |||||||||||    
T  49780718 tttggtttttgtgccaatacctccttttctttgtaaatttatggttgtca 49780669  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 288791 - 288831
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||||||||||||||||||  |||||||||||||    
T  288791 ttatttttttactttctctctctattgctttggtttttgtg 288831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27511790 - 27511866
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| |||| |||||| ||||||||| |||||||||  ||| ||| |  ||||||||||||||||  ||||||||||    
T  27511790 ttatgttttcactttcactctctattgttttggtttccgtgtcaatatctacttttctttgtaaatttatggttgtc 27511866  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 37057058 - 37056998
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||||||||| |||||||||| |||| ||||||||| ||| || |  ||||||||||||||    
T  37057058 tttttactttatctctctattgtttttgtttttgtgtcaatacctcattttctttgtaaaa 37056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39338733 - 39338693
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    ||||||||||||||| |||||||||| ||||| ||||||||    
T  39338733 ttatatttttactttttctctctattgttttgatttttgtg 39338693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 41443190 - 41443134
Alignment:
Q  7 ttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgta 63  Q
    |||||||||||||||||||| ||||| ||||||||| || || ||  ||||||||||    
T  41443190 ttttactttctctctctattgttttgatttttgtgcaaatacctaaatttctttgta 41443134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 44856023 - 44856095
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||||||||||||||  |||| |||||||||||  || |  ||| |||||||||| | |||||||||    
T  44856023 tttttactttctctctctatttctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtca 44856095  T

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Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 51137041 - 51136965
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| |||||||||||||| | |||| ||||| ||||||||| || ||||  ||||||||||| || ||| ||||||    
T  51137041 ttatgtttttactttctctttttattgttttgttttttgtgctaatacattgttttctttgtataattatagttgtc 51136965  T

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Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 52564627 - 52564579
Alignment:
Q  29 tttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||||||| ||||||| || ||||||||||||||||  ||||||||||    
T  52564627 tttggttttagtgccaatacctacttttctttgtaaatctatggttgtc 52564579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 7084720 - 7084601
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||| |||||||| | ||||||||   ||||||    
T  7084720 ttatatttttactttctctttctattgctttgatttttgtaccaacacatacttttctttgtaaaaatatgattgtcaatgtggttgtcaa---ccaaat 7084624  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  7084623 tgatgttcaaataacattgctct 7084601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19843550 - 19843664
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    |||||||||| |||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||   ||||||    
T  19843550 ttatatttttcctttctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatataattgtcaatatgattgtcaa---ccaaat 19843646  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||||||||||||||    
T  19843647 tgatgttcaaataacatt 19843664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 21738621 - 21738504
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||| ||   |||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||||||||   ||||||    
T  21738621 ttatatttttactttctttca--attgctttggtttttgtgccaacacatatttttctttgtaaaaatatgattgtcaatgtcgttgtcaa---ccaaat 21738527  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  21738526 tgatgttcaaataacattgctct 21738504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18737879 - 18737800
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaat 80  Q
    ||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18737879 ttatatttttactttctttctttattgttttgatttttgtgccaacacatacttttctttataaaaatatggttgtcaat 18737800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 26290856 - 26290737
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||| || |||||| ||| ||  ||||||||||||  ||||||||| ||||||||||||||||||| |||||||| ||||| ||||   ||||||    
T  26290856 ttatattttcaccttctctttctgttactttggtttttgtaacaacacatatttttctttgtaaaaatatgattgtcaatgtagttatcaa---ccaaat 26290760  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  26290759 tgatgttcaaataacattgctct 26290737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 33616531 - 33616611
Alignment:
Q  1 ttatatttttactttctc--tctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||||||||||  ||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  33616531 ttatatttttactttctctctctctattgctttgatttttgtaccaacacatacttttctttgtaaaaatatggttgtcaa 33616611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 45420202 - 45420313
Alignment:
Q  2 tatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaatt 101  Q
    |||||||||||||||| ||||||||  |||| | |||||||||| ||||| |||||||||||||||| |||||||| || ||||||||||     |||||    
T  45420202 tatatttttactttctttctctattactttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtctatttagttgtcaa---ataaatt 45420298  T
Q  102 gatgttcaaataaca 116  Q
    |||||||||||||||    
T  45420299 gatgttcaaataaca 45420313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6336318 - 6336394
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||| |||||||||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6336318 ttatatttttattttctctct--atcgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 6336394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 43658715 - 43658598
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||| |  |   ||| ||||||||| || ||||||||||||||||||||| || ||||||||||| ||||||||   ||||||    
T  43658715 ttatatttttactttctctctgt--tgcattgatttttgtgctaatacatacttttctttgtaaaaaaatagttgtcaatatggttgtcaa---ccaaat 43658621  T
Q  101 tgatgttcaaataacattcctct 123  Q
    | |||||||||||||||| ||||    
T  43658620 taatgttcaaataacattgctct 43658598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 3771440 - 3771549
Alignment:
Q  4 tatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattga 103  Q
    |||||| ||||||||||||||||  |||| | |||||| ||| || ||||||||||||||||||| |||||||| || ||||||||||    ||||||||    
T  3771440 tattttcactttctctctctattactttgatatttgtgtcaatacgtacttttctttgtaaaaatgtggttgtccatttagttgtcaa---gcaaattga 3771536  T
Q  104 tgttcaaataaca 116  Q
     ||||||||||||    
T  3771537 cgttcaaataaca 3771549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 16799738 - 16799815
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||| ||||||||||| ||| || | ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  16799738 ttatatttttattttctctctcttttcctt-gatttttgtgctaacacgtacttttctttgtaaaaatatggttgtcaa 16799815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29449277 - 29449388
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| ||||||||| ||  |||||||||||||||||||| || |||||| || | ||||||||    |||||    
T  29449277 ttatatttttactttctctctctattactttgatttttgtgcaaatgcatacttttctttgtaaaaacat-gttgtctatttggttgtcaa---gcaaat 29449372  T
Q  101 tgatgttcaaataaca 116  Q
     |||||||||||||||    
T  29449373 agatgttcaaataaca 29449388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 12070913 - 12071032
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||| ||||||  |||| |||| ||| ||| ||||  ||||||||||||||| ||||||||| || | ||||||||    || ||    
T  12070913 ttatatttttactttctctttctattgctttgattttcgtgtcaatacatgattttctttgtaaaaagatggttgtccatgtggttgtcaa---tcacat 12071009  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  12071010 tgatgttcaaataacattgctct 12071032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12784404 - 12784290
Alignment:
Q  1 ttatatttttactttctctctct--attcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaa 98  Q
    |||||||||||||||||||||||  |||  |||| ||||| ||||||  |||| ||||||||||||||| ||||||||| || ||||||||||    |||    
T  12784404 ttatatttttactttctctctctctattactttgatttttatgccaatgcatatttttctttgtaaaaacatggttgtctatttagttgtcaa---gcaa 12784308  T
Q  99 attgatgttcaaataaca 116  Q
    || |||||||||||||||    
T  12784307 atagatgttcaaataaca 12784290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4657367 - 4657477
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| | ||| |||||| ||| | |||||||||||||||| || ||||| || | ||||||||    |||||    
T  4657367 ttatatttttactttctctctctattactttgatatttatgccaatacacaattttctttgtaaaaatgtgattgtccatttggttgtcaa---gcaaat 4657463  T
Q  101 tgatgttcaaataa 114  Q
    ||||||||||||||    
T  4657464 tgatgttcaaataa 4657477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 40599284 - 40599208
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||  ||||| |||| |||||||||||||| |||||||    
T  40599284 ttatatttttactttctctctatattgctttggtttttgtgcca--acatatttttttttgtaaaaatatgattgtcaa 40599208  T

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Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 45259279 - 45259216
Alignment:
Q  16 ctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    |||||||||||  |||| ||||||| |||||||||||||||||||||||||||||| |||||||    
T  45259279 ctctctctattgctttgatttttgtaccaacacatacttttctttgtaaaaatatgtttgtcaa 45259216  T

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Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1040579 - 1040645
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaa 67  Q
    ||||||||||| ||||||| ||||||  |||| |||||||||||| |||||||||||||||||||||    
T  1040579 ttatatttttattttctctttctattactttgatttttgtgccaatacatacttttctttgtaaaaa 1040645  T

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Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36774604 - 36774682
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||||||||||||||||||  |||| |||| || | || | |||||||||||| ||||||||||||||||||    
T  36774604 ttatatttttactttctctctctattgctttgattttagtactaatagatacttttctttataaaaatatggttgtcaa 36774682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7664072 - 7663995
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||| || |  |||||||||||||  |||||||||||    
T  7664072 ttatatttttactttctctctctattgctttggtttttgtgtcaatacctctttttctttgtaaatttatggttgtca 7663995  T

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Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 17999678 - 17999571
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatg 105  Q
    |||||| ||| ||||||||||  |||| |||| ||||||| ||||| ||||||||||||||| | ||||||| || ||||||||||    ||||| ||||    
T  17999678 tttttattttatctctctattactttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttagttgtcaa---acaaatagatg 17999582  T
Q  106 ttcaaataaca 116  Q
    |||||||||||    
T  17999581 ttcaaataaca 17999571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 23690509 - 23690438
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||||||||||| ||||||| |||||||||||||| ||| || |  ||| |||||||||||||||||||||    
T  23690509 tttttactttctcactctattgttttggtttttgtgtcaatacctcttttcctttgtaaaaatatggttgtc 23690438  T

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Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 42532744 - 42532630
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| ||||||||||  |||| |||| ||||||| ||||| |||||||| |||||| || || ||| || | ||||||||    |||||    
T  42532744 ttatatttttactttatctctctattactttgattttcgtgccaatacatatttttctttataaaaacatagtagtctatttggttgtcaa---gcaaat 42532648  T
Q  101 tgatgttcaaataacatt 118  Q
     |||||||||||||||||    
T  42532647 agatgttcaaataacatt 42532630  T

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Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9194306 - 9194349
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  9194306 ttatctttttactttctctctctattgttttggtttttgtgcca 9194349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 42430715 - 42430790
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 76  Q
    |||| ||||||||| ||||||||||| |||||||||  ||| ||| || ||||||||||||||||  |||||||||    
T  42430715 ttatgtttttacttcctctctctattgttttggtttccgtgtcaatacctacttttctttgtaaacttatggttgt 42430790  T

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Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4138191 - 4138102
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    ||||| ||||||||||| ||||||||  ||| ||||| ||||||| | ||||||||||||||||| |||| |||||| || | ||||||||    
T  4138191 ttataattttactttctgtctctattactttagttttggtgccaata-atacttttctttgtaaatatattgttgtccatttggttgtcaa 4138102  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5361859 - 5361936
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |||| ||||  |  ||||||||||||||| |||||||    
T  5361859 ttatatttttactttctttttctattgttttggtttttgtgtcaacgcata-atggctttgtaaaaatatgattgtcaa 5361936  T

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Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9207655 - 9207732
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  9207655 ttatttttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtca 9207732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22416278 - 22416355
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||||||   | |  |||||||||||||| | |||||||||    
T  22416278 ttatctttttactttctctctctattgctttggtttttgtgccactgcctcattttctttgtaaaattttggttgtca 22416355  T

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Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 7648459 - 7648519
Alignment:
Q  5 atttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaa 65  Q
    ||||||||||| |||||||||| ||||||||||||||| || || |  |||||||||||||    
T  7648459 atttttactttatctctctattgttttggtttttgtgcaaatacttctttttctttgtaaa 7648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 18982952 - 18982996
Alignment:
Q  47 acatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    ||||||||||||||||||||||||||||||| || | ||||||||    
T  18982952 acatacttttctttgtaaaaatatggttgtccatttggttgtcaa 18982996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 39309523 - 39309586
Alignment:
Q  49 atacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatgttcaaataac 115  Q
    ||||||||||||||||||||||| || |||||||  |||||||   |||||||||| ||||||||||    
T  39309523 atacttttctttgtaaaaatatgattatcaatatgattgtcaa---ccaaattgattttcaaataac 39309586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44977505 - 44977429
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||| ||    |||||||||||||  ||||||||||    
T  44977505 ttatgtttttactttctctctctattgctttggtttttgtgtcaataccccattttctttgtaaatttatggttgtc 44977429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18254215 - 18254172
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||| |||||||||||||||||||||  ||||||||||||||||    
T  18254215 ttatctttttactttctctctctattgctttggtttttgtgcca 18254172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 14255374 - 14255444
Alignment:
Q  7 ttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||||||||||||||||||   ||||||| ||||  || || ||||||||||||||||  ||||||||||    
T  14255374 ttttactttctctctctattgcattggtttatgtgttaatacctacttttctttgtaaatttatggttgtc 14255444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14328447 - 14328537
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    ||||||||||||||||||||||| ||  |||| |||| ||| ||| ||||  ||||||| ||||||||||  ||||| || | ||||||||    
T  14328447 ttatatttttactttctctctctgttgctttgattttcgtgtcaatacatgattttcttagtaaaaatataattgtccatgtggttgtcaa 14328537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 44287441 - 44287371
Alignment:
Q  8 tttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||||| |||||||| ||||||||  || |  ||| |||||||||| | |||||||||    
T  44287441 tttactttctctctctattgttttggttattgtgccacaacctcatttcctttgtaaaattttggttgtca 44287371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1907769 - 1907692
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| ||||||||||||||||||||| ||||| |||||||| |||  |    |||||||||||||  |||||||||||    
T  1907769 ttatgtttttactttctctctctattgttttgatttttgtgtcaattccgctttttctttgtaaatttatggttgtca 1907692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9647197 - 9647274
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||  || |  ||| |||||||||| | |||||||||    
T  9647197 ttatctttttactttctctctctattgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgtca 9647274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 10216920 - 10216985
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatg 71  Q
    |||||||||||||||||||||  || |||||||||| ||| || |  |||||||||||||| ||||    
T  10216920 tttttactttctctctctattgcttcggtttttgtgtcaatacctttttttctttgtaaaattatg 10216985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 27490736 - 27490624
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    |||| |||||| ||||||||||||||  |||| ||||||||  || ||||  |||||||||||||| | || ||||||  | ||||||||   || ||||    
T  27490736 ttatgtttttaatttctctctctattgctttgatttttgtgttaatacatcattttctttgtaaaattttgattgtcacaaaagttgtca---tcaaaat 27490640  T
Q  101 tgatgttcaaataaca 116  Q
     |||||||||||||||    
T  27490639 ggatgttcaaataaca 27490624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28494925 - 28495002
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||| |||||||||  ||| |||||||||||||| ||| || || |||||| ||||||  |||||||||||    
T  28494925 ttatgtttttattttctctctaaattattttggtttttgtgtcaatacctaattttctgtgtaaatttatggttgtca 28495002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 40700261 - 40700373
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| ||||||||||  |||| |||| ||| ||| | ||| |||| ||| |||||| ||| ||||| || | ||||||||    |||||    
T  40700261 ttatatttttactttatctctctattactttgattttcgtgtcaatatatatttttttttataaaaacatgattgtctatttggttgtcaa---gcaaat 40700357  T
Q  101 tgatgttcaaataaca 116  Q
     |||||||||||||||    
T  40700358 agatgttcaaataaca 40700373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1352454 - 1352498
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaa 45  Q
    ||||||||||||||| | ||||||||  |||||||||||||||||    
T  1352454 ttatatttttactttatttctctattgctttggtttttgtgccaa 1352498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 2076639 - 2076711
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||||||| ||||||  |||| |||||||| ||| || |  |||||||||||||| | |||||||||    
T  2076639 tttttactttctctttctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtca 2076711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3838886 - 3838846
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| ||||||||||||||||||||| ||||| ||||||||    
T  3838886 ttatctttttactttctctctctattgttttgatttttgtg 3838846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 4061965 - 4061913
Alignment:
Q  4 tatttttactttctctctctattcttttggtttttgtgccaacacatactttt 56  Q
    |||||||||||| |||||||||| |||||||||  |||| || ||||||||||    
T  4061965 tatttttactttatctctctattgttttggtttccgtgcaaatacatactttt 4061913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8427618 - 8427654
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttt 37  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  8427618 ttatacttttactttctctctctattattttggtttt 8427654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 41195654 - 41195726
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||||||||||||||  ||||||||||||| ||| |  |  ||| |||||||||| | |||||||||    
T  41195654 tttttactttctctctctattgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtca 41195726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 34818050 - 34817931
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||   | ||||    
T  34818050 ttatatttttactttctctttctattgctttgatttttgtgccaacacatatttttctttgtaaaaatatggttgtcaatatgattgtcaa---ctaaat 34817954  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  34817953 tgatgttcaaataacattgctct 34817931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 29359809 - 29359928
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| ||||||||||  ||| ||||||||| |||||||||||||||||| ||||||||||||||||||| | ||||||||    |||||    
T  29359809 ttatatttttactttttctctctattgcttttgtttttgtgtcaacacatacttttctttataaaaatatggttgtcaatgtggttgtcaa---tcaaat 29359905  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  29359906 tgatgttcaaataacattgctct 29359928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 49570062 - 49570154
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacc 93  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |  |||||||||    
T  49570062 ttatatttttactttctctctctattgttttgatttttgtgccaacacatacttttctttataaaaatatggttgtcaatgtgattgtcaacc 49570154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23665731 - 23665653
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23665731 ttatatttttactttctctctcaattgctttggtttttgtgtcaacacatacttttctttgtaaaaatatggttgtcaa 23665653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 49020409 - 49020301
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    |||||||||| ||||||||||  ||| |||||||||||||||||| | ||| |||||||||||||||||||||||||||| | ||||||||   ||||||    
T  49020409 ttatattttttctttctctct--attgttttggtttttgtgccaatatatatttttctttgtaaaaatatggttgtcaatttggttgtcaa---ccaaat 49020315  T
Q  101 tgatgttcaaataa 114  Q
    ||||||||||||||    
T  49020314 tgatgttcaaataa 49020301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12999828 - 12999716
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||| ||||||  |||| | |||||||||| ||||| |||||||||||||||| |||||||| || ||||||||||    |||||    
T  12999828 ttatatttttactttctctttctattactttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtccatttagttgtcaa---gcaaat 12999732  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  12999731 tgatgttcaaataaca 12999716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 29877370 - 29877482
Alignment:
Q  8 tttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatgtt 107  Q
    ||||||||||||||||||| |||||||||| ||| ||| ||||| ||||||||||||||||||||||||| ||||  |||||||     |||||||||||    
T  29877370 tttactttctctctctattgttttggttttcgtgtcaatacataattttctttgtaaaaatatggttgtccatatgattgtcaa---taaaattgatgtt 29877466  T
Q  108 caaataacattcctct 123  Q
    ||||||||||| ||||    
T  29877467 caaataacatttctct 29877482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30745052 - 30745166
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||| ||||||||| |||||||||| |||||||||||||| ||| ||||| |||||||||||| | |||||||||| |||| ||||||||    |||||    
T  30745052 ttataattttactttatctctctattgttttggtttttgtgtcaatacataattttctttgtaagagtatggttgtctatatggttgtcaa---tcaaat 30745148  T
Q  101 tgatgttcaaataacatt 118  Q
    | ||||||||||||||||    
T  30745149 taatgttcaaataacatt 30745166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30766503 - 30766617
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||| ||||||||| |||||||||| |||||||||||||| ||| ||||| |||||||||||| | |||||||||| |||| ||||||||    |||||    
T  30766503 ttataattttactttatctctctattgttttggtttttgtgtcaatacataattttctttgtaagagtatggttgtctatatggttgtcaa---tcaaat 30766599  T
Q  101 tgatgttcaaataacatt 118  Q
    | ||||||||||||||||    
T  30766600 taatgttcaaataacatt 30766617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 50242376 - 50242452
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||| ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  50242376 ttataattttactttctctctctattactttggttttcgtgccaatacatacttttctttgtaaatatatggttgtc 50242452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 49446803 - 49446685
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatac----ttttctttgtaaaaatatggttgtcaatatagttgtcaacctcc 96  Q
    ||||||||||||||||||||||||||  |||| | |||||||||| ||||||    |||||||||||||||| || ||||| || ||||||||||    |    
T  49446803 ttatatttttactttctctctctattactttgatatttgtgccaatacatacatatttttctttgtaaaaatgtgattgtccatttagttgtcaa---gc 49446707  T
Q  97 aaattgatgttcaaataacatt 118  Q
    ||||||||||||||||||||||    
T  49446706 aaattgatgttcaaataacatt 49446685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30973618 - 30973730
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||| ||| ||||||||||  |||| | |||||| ||| |||||||||||||||||||||| || ||||| || ||||||||||    |||||    
T  30973618 ttatatttttattttttctctctattactttgatatttgtgtcaatacatacttttctttgtaaaaatgtgattgtccatttagttgtcaa---gcaaat 30973714  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  30973715 tgatgttcaaataaca 30973730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 49931619 - 49931731
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| |||||||| |  |||| | |||||||||| ||||||||||||||| |||||| |||||||| || ||||| ||||    |||||    
T  49931619 ttatatttttactttatctctctaatactttgatatttgtgccaatacatacttttctttggaaaaatgtggttgtccatttagttatcaa---gcaaat 49931715  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  49931716 tgatgttcaaataaca 49931731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36750488 - 36750412
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    |||||||||||| |||| |||  |||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36750488 ttatatttttaccttctatct--attgctttgttttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 36750412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 740961 - 740880
Alignment:
Q  1 ttatatttttactttctctctct--attcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaat 80  Q
    |||||||||||||||||||||||  ||| ||||||||||||||  || ||||| |||||||||||||| |||||||||||||    
T  740961 ttatatttttactttctctctctctattattttggtttttgtgttaatacataattttctttgtaaaattatggttgtcaat 740880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 11947861 - 11947950
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtca 90  Q
    |||||| |||||||||||| ||||||  |||  ||||||||| ||||||| ||||| |||||||||||||||||||| || |||||||||    
T  11947861 ttatatatttactttctctttctattactttaatttttgtgcaaacacatgcttttatttgtaaaaatatggttgtctatttagttgtca 11947950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 33076185 - 33076297
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||| ||||||||||||||  |||| | |||||||||| ||||| |||||||||||||| | |||||||| || || || ||||    |||||    
T  33076185 ttatatttttattttctctctctattactttgatatttgtgccaatacataattttctttgtaaaattgtggttgtccatttaattatcaa---gcaaat 33076281  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  33076282 tgatgttcaaataaca 33076297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 50775162 - 50775085
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||| ||||||||||  ||||||||||||| ||||||||  |||||||||||||| |||||||||||    
T  50775162 ttatgtttttactttatctctctattgctttggtttttgtgtcaacacatctttttctttgtaaaattatggttgtca 50775085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1689457 - 1689544
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtca 90  Q
    |||||| |||||||||| |||  |||  |||| |||||||| |||||||||||||| ||| |||||||||||||||| ||||||||||||    
T  1689457 ttatatatttactttctttct--attactttgatttttgtgtcaacacatacttttatttataaaaatatggttgtctatatagttgtca 1689544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44723426 - 44723503
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||| | ||| |||| |||||||||| || |||| |||||| |||||||||||||||||| ||||||    
T  44723426 ttatatttttactttatttctttattgttttggttttcgtaccaatacatacatttctttgtaaaaatatgattgtca 44723503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11597702 - 11597778
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| ||||||||||||||||||||| |||||||||| |||| || |  ||||||||||||||||  ||||||||||    
T  11597702 ttatgtttttactttctctctctattgttttggttttcgtgctaatatctacttttctttgtaaatctatggttgtc 11597778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 30519630 - 30519511
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| ||||| ||||  ||||||||| |||  || ||||  ||||||||||||||| ||||||||| || | ||||||||    || ||    
T  30519630 ttatatttttactttatctctttattgctttggttttcgtgttaatacatgattttctttgtaaaaagatggttgtccatgtggttgtcaa---tcacat 30519534  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  30519533 tgatgttcaaataacattgctct 30519511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 48261205 - 48261281
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| |||||||||||||||||||||  ||||||||||||||||| || |  ||| ||||||||||||||| |||||    
T  48261205 ttatgtttttactttctctctctattgctttggtttttgtgccaatacctcttttcctttgtaaaaatatgattgtc 48261281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30536057 - 30536165
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    |||||||||||||||||||||  |||  |||| | ||||||||||||  ||||||||||||||||||| ||||||||  | ||||||| ||    |||||    
T  30536057 ttatatttttactttctctct--attactttgatatttgtgccaaca--tacttttctttgtaaaaatgtggttgtccgtttagttgttaa---gcaaat 30536149  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  30536150 tgatgttcaaataaca 30536165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 46100935 - 46101006
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||||| |||||||| ||| | |||||||||||||| ||| ||||| ||||||||||||| |||||||||||    
T  46100935 tttttattttctctcactaattttttggtttttgtgtcaatacataattttctttgtaaatatatggttgtc 46101006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34768196 - 34768271
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||| |||||||||||||||  |||  ||||||||| |||| || |||||| |||||||||||||||||||||||||    
T  34768196 ttataattttactttctctct--attgctttggttttcgtgcaaatacatacatttctttgtaaaaatatggttgtca 34768271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18434860 - 18434937
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| ||||  ||||||||| |||| | |||||||||    
T  18434860 ttatgtttttactttctctctttattgttttgatttttgtgccaatacatcattttctttgcaaaattttggttgtca 18434937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23645476 - 23645553
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| ||||||||||||||||||||| |||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  23645476 ttatctttttactttctctctctattgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgtca 23645553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49065370 - 49065305
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||||||||||||||||||  ||||||||||||||||| || |  ||||||||||||||    
T  49065370 ttatgtttttactttctctctctattgctttggtttttgtgccaatacttcattttctttgtaaaa 49065305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26501292 - 26501180
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||| ||||||||||| || |||||  |||||||| |||||||| ||| || ||||||| ||||||| ||||||||||| | ||||| ||| |  | ||    
T  26501292 ttataattttactttctttccctattactttggtttctgtgccaatacacacatttctttctaaaaatgtggttgtcaatttggttgt-aacgt--acat 26501196  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  26501195 tgatgttcaaataaca 26501180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 49559203 - 49559131
Alignment:
Q  4 tatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 76  Q
    |||||||| ||| ||||||||||  |||  ||||| | |||||||||||||||||||||||||||||| ||||    
T  49559203 tatttttattttatctctctattgctttaatttttataccaacacatacttttctttgtaaaaatatgattgt 49559131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 17652694 - 17652769
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 76  Q
    |||||||| |||||||| ||||||||  |||| |||||||| |||| |||||||||||| ||||||| ||| ||||    
T  17652694 ttatatttatactttctttctctattactttgatttttgtgtcaacgcatacttttcttcgtaaaaacatgattgt 17652769  T

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Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 51571347 - 51571276
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||||||||||||| ||||||  ||||||||||||| ||| || |  |||||||||||||| ||||||||||    
T  51571347 tttttactttctctttctattgctttggtttttgtgtcaatacctctttttctttgtaaaattatggttgtc 51571276  T

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Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31088246 - 31088323
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||||||  || |  |||| ||||||||| | |||||||||    
T  31088246 ttatctttttactttctctctctattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgtca 31088323  T

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Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 50726254 - 50726177
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||  || |  ||||||||| |||| | |||||||||    
T  50726254 ttatctttttactttctctctctattgttttgatttttgtgccactacctcattttctttgcaaaattttggttgtca 50726177  T

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Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8454685 - 8454609
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||||||||| ||||||||| |||| |||| ||||| |||  |  | |||||||||||| ||||||||||||||||    
T  8454685 ttatatttttattttctctctttattgttttagttttcgtgtgagtatatacttttctttataaaaatatggttgtc 8454609  T

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Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9988017 - 9988061
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaa 45  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||    
T  9988017 ttatatttttactttctctctctattgctttgatttttgtgccaa 9988061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14983838 - 14983914
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| ||||||||||||||||||||| |||| ||||||||| ||| |  |  |||||||||| ||| ||||||||||    
T  14983838 ttatgtttttactttctctctctattgttttagtttttgtgtcaatatctctttttctttgtgaaattatggttgtc 14983914  T

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Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51080096 - 51080056
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  51080096 ttatatttttactttctctctctattgctttggtttttgtg 51080056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5771250 - 5771171
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaat 80  Q
    ||||||||||||||| ||| | ||||  ||||||||| ||   || ||||| ||||||||||||| ||||||||||||||    
T  5771250 ttatatttttactttatctatatattactttggttttcgttttaatacataattttctttgtaaagatatggttgtcaat 5771171  T

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Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 8828122 - 8828083
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaa 45  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  8828122 tttttactttctctctctattgctttggtttttgtgccaa 8828083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 19055760 - 19055725
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtg 41  Q
    ||||||||||||||||||||| ||||||||||||||    
T  19055760 tttttactttctctctctattgttttggtttttgtg 19055725  T

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Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 48470709 - 48470748
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaa 45  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  48470709 tttttactttctctctctattgttttggtttctgtgccaa 48470748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29359704 - 29359779
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| ||||||||||||||||  |||  ||||||||||||||||  ||||  |||||||||||||| | |||||||||    
T  29359704 ttatctttttactttctctct--attgctttggtttttgtgccattacatcattttctttgtaaaattttggttgtca 29359779  T

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Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 49647150 - 49647116
Alignment:
Q  7 ttttactttctctctctattcttttggtttttgtg 41  Q
    |||||||||||||||||||| ||||||||||||||    
T  49647150 ttttactttctctctctattgttttggtttttgtg 49647116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52576308 - 52576266
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcc 43  Q
    |||| |||||||||||||||||||||  |||||||||||||||    
T  52576308 ttatttttttactttctctctctattgctttggtttttgtgcc 52576266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 649834 - 649911
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||  || |  ||| |||||||||| | |||||||||    
T  649834 ttatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtca 649911  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 8846044 - 8846105
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaa 67  Q
    |||||||||| ||| ||||||  ||||||||||||| ||| ||||  |||||||||||||||    
T  8846044 tttttactttttctttctattgctttggtttttgtgtcaatacatctttttctttgtaaaaa 8846105  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15083056 - 15082991
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||| || |  ||| ||||||||||    
T  15083056 ttatctttttactttctctctctattgctttggtttttgtgtcaatacttcatttcctttgtaaaa 15082991  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41677330 - 41677289
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgc 42  Q
    ||||||||||| ||| |||||||||| |||||||||||||||    
T  41677330 ttatatttttattttatctctctattgttttggtttttgtgc 41677289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 50149011 - 50149076
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||   ||  ||||||||||||||    
T  50149011 ttatatttttactttctttctctattgctttggtttttgtgtcaatcaatcattttctttgtaaaa 50149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 3982027 - 3981967
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    ||||||||||||||||||||| |||||||| ||||| ||| |  |  ||||||||||||||    
T  3982027 tttttactttctctctctattgttttggttattgtgtcaatatctcattttctttgtaaaa 3981967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 27465058 - 27464986
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||| ||||||||||  ||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  27465058 tttttactttgtctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtca 27464986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27533490 - 27533414
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| |||||||||||||||| |||| ||||| ||||| || ||| || |  |||||||||||||| | ||||||||    
T  27533490 ttatgtttttactttctctctttattgttttgatttttatgtcaatacctcattttctttgtaaaattttggttgtc 27533414  T

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Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33100873 - 33100913
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| ||||||||||||||||||||| ||||| ||||||||    
T  33100873 ttatctttttactttctctctctattgttttgatttttgtg 33100913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52437560 - 52437636
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||||||||||||| ||| ||||||  |||| |||| ||  ||| ||||| |||| |||||||||| |||||||||    
T  52437560 ttatatttttactttatctttctattgctttgattttcgtatcaatacataattttatttgtaaaaagatggttgtc 52437636  T

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Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 35822980 - 35822866
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| |||||||||||| ||||| |||||||||||||||||||||||||||  | ||||||||   ||||||    
T  35822980 ttatatttttactttctctctctattgctttgatttttgtgccaatacatatttttctttgtaaaaatatggttgtcaacgtggttgtcaa---ccaaat 35822884  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||||||||||||||    
T  35822883 tgatgttcaaataacatt 35822866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 40854660 - 40854582
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40854660 ttatatttttactttctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 40854582  T

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Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 48145590 - 48145668
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||||||||||||||||||  |||| | |||||||||| |||||||||||||||||||||||||||||||||    
T  48145590 ttatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatatggttgtcaa 48145668  T

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Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 47954107 - 47954029
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 79  Q
    ||||||||||||||||| ||| |||| ||||  ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  47954107 ttatatttttactttctttctttattgttttaatttttgtaccaacacatacttttctttataaaaatatggttgtcaa 47954029  T

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Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47012575 - 47012496
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaat 80  Q
    ||||||||||| ||||| | | |||| ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  47012575 ttatatttttattttctttttttattgttttgatttttgtaccaacatatacttttctttgtaaaaatatggttgtcaat 47012496  T

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Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44496808 - 44496699
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||| ||| |||||||  ||||| ||||| | |||||||||| ||||| ||||||||||||||||||||||||| || || |||||||    |||||    
T  44496808 ttatattattattttctcttgctattattttgatatttgtgccaatacataattttctttgtaaaaatatggttgtccatttaattgtcaa---acaaat 44496712  T
Q  101 tgatgttcaaata 113  Q
    |||||||||||||    
T  44496711 tgatgttcaaata 44496699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 41430157 - 41430038
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| ||||||||||  ||||||||| ||| ||| | ||  ||||||||||||||| ||||||||| || | ||||||||    || ||    
T  41430157 ttatatttttactttatctctctattgctttggttttcgtgtcaatatatgattttctttgtaaaaagatggttgtccatgtggttgtcaa---tcacat 41430061  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  41430060 tgatgttcaaataacattgctct 41430038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 41590525 - 41590415
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||| | ||||||  |||| |||||||||||| ||||| ||||| ||||||||| ||||||||| || | ||||||||    |||||    
T  41590525 ttatatttttactttctttttctattactttgatttttgtgccaatacatatttttccttgtaaaaacatggttgtctatttggttgtcaa---gcaaat 41590429  T
Q  101 tgatgttcaaataa 114  Q
     |||||||||||||    
T  41590428 agatgttcaaataa 41590415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 46260097 - 46260024
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggtt 74  Q
    ||||||||||||||||||| ||||||  ||||||||| || |||| ||||| ||||||||||||||| ||||||    
T  46260097 ttatatttttactttctctttctattactttggttttcgtaccaatacatatttttctttgtaaaaacatggtt 46260024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26018106 - 26018196
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    ||||||||||||||||||||||||||  |||  ||||| | | || |||||||||||||| |||||||||| ||||| || || |||||||    
T  26018106 ttatatttttactttctctctctattactttaatttttatacaaatacatacttttctttataaaaatatgattgtctatttaattgtcaa 26018196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 31398195 - 31398280
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    |||||| ||||||||||||||  |||| |||| ||||||| ||||| ||||||||||||||| | ||||||| || | ||||||||    
T  31398195 tttttattttctctctctattactttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttggttgtcaa 31398280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 44651234 - 44651121
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttcttt-gtaaaaatatggttgtcaatatagttgtcaacctccaaa 99  Q
    |||||||||||||||||||||  |||  |||  ||||||| ||||| ||||||||| ||| |||||||||| ||| ||||||||||||||||     |||    
T  44651234 ttatatttttactttctctct--attactttaatttttgtaccaacgcatactttttttttgtaaaaatatagttatcaatatagttgtcaa---tgaaa 44651140  T
Q  100 ttgatgttcaaataacatt 118  Q
    |||||||||||||| ||||    
T  44651139 ttgatgttcaaatatcatt 44651121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36352590 - 36352475
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatag-ttgtcaacctccaaa 99  Q
    ||||||||||||||| ||||||||||  |||| |||| ||| ||| | ||  ||||||||||||||| ||||||||| || ||| |||||||    || |    
T  36352590 ttatatttttactttatctctctattgctttgattttcgtgtcaatatatgattttctttgtaaaaagatggttgtccatgtagtttgtcaa---tcaca 36352494  T
Q  100 ttgatgttcaaataacatt 118  Q
    |||||||||||||||||||    
T  36352493 ttgatgttcaaataacatt 36352475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41590088 - 41590012
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||||||||||||||| | ||||||  |||| |||||||||||| ||||| ||||| || |||||||||| |||||    
T  41590088 ttatatttttactttctttttctattactttgatttttgtgccaatacatatttttccttataaaaatatgattgtc 41590012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 42584868 - 42584987
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| ||||||||||  |||| || | ||| ||| | ||  ||||||||||||||| ||||||||| || | ||||||||    || ||    
T  42584868 ttatatttttactttatctctctattgctttgattctcgtgtcaatagatgattttctttgtaaaaagatggttgtccatgtggttgtcaa---tcacat 42584964  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  42584965 tgatgttcaaataacattgctct 42584987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 34507211 - 34507097
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| |||| ||| ||| ||||  |||| ||| |||||| || |||||| || | ||||||||    || ||    
T  34507211 ttatatttttactttctctctctattgctttgattttcgtgtcaatacatgattttttttataaaaagatagttgtccatgtggttgtcaa---tcacat 34507115  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||||||||||||||    
T  34507114 tgatgttcaaataacatt 34507097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38861161 - 38861204
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  38861161 ttatctttttactttctctctctattgttttggtttttgtgcca 38861204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 4225823 - 4225896
Alignment:
Q  7 ttttactttctctctctattcttttggtttttgtgccaacacatactttt-ctttgtaaaaatatggttgtcaa 79  Q
    ||||||||| |||||||||| |||||||||| ||| ||| || ||||||| |||| ||||| ||||||||||||    
T  4225823 ttttactttatctctctattgttttggttttcgtgtcaatacctactttttctttataaaactatggttgtcaa 4225896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22541031 - 22540994
Alignment:
Q  1 ttatatttttactttctctctctattcttttggttttt 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  22541031 ttatatttttactttctctctctattattttggttttt 22540994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27568083 - 27568132
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacat 50  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||| ||||    
T  27568083 ttatgtttttactttctctctctattgttttggtttttgtgtcaatacat 27568132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41018729 - 41018806
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||||||||||||  |||||||||||||  || || |  |||||||||||||  |||| ||||||    
T  41018729 ttatatttttactttctctctctattactttggtttttgtgttaatacctctttttctttgtaaatttatgattgtca 41018806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44895578 - 44895501
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  44895578 ttatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtca 44895501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 48062122 - 48062187
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||| || |  |||||||| |||||    
T  48062122 ttatgtttttactttctctctctattgttttggtttttgtgtcaatacctcattttctttataaaa 48062187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4292493 - 4292560
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaat 68  Q
    |||| |||||||||||||||||||||  |||| ||||||| |||| |  || ||||||||||||||||    
T  4292493 ttatgtttttactttctctctctattgctttgatttttgtaccaatatttaattttctttgtaaaaat 4292560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40112960 - 40112917
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||| |||||||||||||||||||||  ||||||||||||||||    
T  40112960 ttatctttttactttctctctctattgctttggtttttgtgcca 40112917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41989748 - 41989705
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||    
T  41989748 ttatatttttactttctctctttattgctttggtttttgtgcca 41989705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 42552977 - 42553036
Alignment:
Q  15 tctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggtt 74  Q
    ||||||||| || |||||||||||||||||| || |  |||||||||||||| |||||||    
T  42552977 tctctctctgttgttttggtttttgtgccaatacctctttttctttgtaaaattatggtt 42553036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 43482591 - 43482665
Alignment:
Q  4 tatttttactttctctctctattcttttggtttttgtgccaacacatac-ttttctttgtaaaaatatggttgtca 78  Q
    |||||||||||| |||||||||| |||||||||| |||| || || ||| ||||||||| |||| |||||||||||    
T  43482591 tatttttactttatctctctattgttttggttttcgtgcaaatacctactttttctttg-aaaattatggttgtca 43482665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9363453 - 9363519
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaa 67  Q
    ||||||||| |||||||||||| |||  |||| |||| ||  ||| |||||||||||||||||||||    
T  9363453 ttatattttgactttctctctccattactttgattttcgtatcaatacatacttttctttgtaaaaa 9363519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 22918170 - 22918132
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  22918170 tttttactttctctctctattgctttggtttttgtgcca 22918132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 31467256 - 31467218
Alignment:
Q  7 ttttactttctctctctattcttttggtttttgtgccaa 45  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  31467256 ttttactttctctctcttttattttggtttttgtgccaa 31467218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 31711940 - 31711898
Alignment:
Q  3 atatttttactttctctctctattcttttggtttttgtgccaa 45  Q
    ||||||| | |||||||||||||| ||||||||||||||||||    
T  31711940 atattttcattttctctctctattgttttggtttttgtgccaa 31711898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 46829549 - 46829623
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatactttt-ctttgtaaaaatatggttgtcaa 79  Q
    |||||||||| ||||||||||  |||| |||| ||||||| || ||||||| |||||||||  ||||||||||||    
T  46829549 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaatttatggttgtcaa 46829623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 3062400 - 3062472
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacata-cttttctttgtaaaaatatggttgtca 78  Q
    |||||||||| |||||||||| ||||||||||||||| || || ||  |||||||||| ||| |||||||||||    
T  3062400 tttttactttatctctctattgttttggtttttgtgcaaatacctattttttctttgt-aaattatggttgtca 3062472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38956624 - 38956547
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  |||| |||||||||||  || |  ||| |||||||||| | |||||||||    
T  38956624 ttatctttttactttctctctctattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtca 38956547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 43159580 - 43159504
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||||||||||||  ||||||||| ||  ||| || |  |||||||||||||  |||||||||||    
T  43159580 ttatatttttactttctctctctattgctttggtttt-gtatcaatacctctttttctttgtaaatttatggttgtca 43159504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 45420060 - 45420023
Alignment:
Q  7 ttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  45420060 ttttactttctctctctattgttttgatttttgtgcca 45420023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1504366 - 1504302
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaa 65  Q
    ||||||| ||||||| |||||||||| |||||||||| ||  ||| || ||||||||||| ||||    
T  1504366 ttatattcttactttatctctctattgttttggttttcgtatcaatacctacttttctttataaa 1504302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24532948 - 24532908
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||||||||||||||||||  |||||||||||||    
T  24532948 ttatgtttttactttctctctctattgctttggtttttgtg 24532908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31445383 - 31445423
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    ||||||||||||||||||||||||||  |||| ||||||||    
T  31445383 ttatatttttactttctctctctattgctttgatttttgtg 31445423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 31844606 - 31844546
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatac-ttttctttgtaaa 65  Q
    |||||||||| |||||||||| ||||||||||||| | || || ||| |||||||||||||    
T  31844606 tttttactttatctctctattgttttggtttttgtacaaatacctactttttctttgtaaa 31844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44189316 - 44189276
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||||||||||||||||||  |||||||||||||    
T  44189316 ttatctttttactttctctctctattactttggtttttgtg 44189276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46095016 - 46095056
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    ||||||||||| |||||||||||||| | ||||||||||||    
T  46095016 ttatatttttattttctctctctattgtattggtttttgtg 46095056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47356049 - 47356113
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaa 65  Q
    |||||||| |||||| | || ||||| |||||||||||||  ||| |||||||||||||| ||||    
T  47356049 ttatatttctactttttatcactattgttttggtttttgtatcaatacatacttttctttataaa 47356113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 49069315 - 49069355
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||| |||||||||||||| ||||||||||||||    
T  49069315 ttatgtttttattttctctctctattgttttggtttttgtg 49069355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 16019542 - 16019661
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| |||||||| |||| |||| |||||||| |||||||||||||||||||||  |||||||    |||||    
T  16019542 ttatatttttactttctctctctattgctttgatttttgtgtcaacgcatatttttctttataaaaatatggttgtcaatatgcttgtcaa---tcaaat 16019638  T
Q  101 tgatgttcaaataacattcctct 123  Q
    |||||||||||||||||| ||||    
T  16019639 tgatgttcaaataacattgctct 16019661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 49585060 - 49585172
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| | |||||||||| ||||||||||||| |||||||| |||||||| || ||||||||||    |||||    
T  49585060 ttatatttttactttctctctctattactttgatatttgtgccaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaa---gcaaat 49585156  T
Q  101 tgatgttcaaataaca 116  Q
    | ||||||||||||||    
T  49585157 taatgttcaaataaca 49585172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 47015087 - 47015185
Alignment:
Q  17 tctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatgttcaaataaca 116  Q
    ||||||||||  ||||||||||||||||| | ||||||||||||||||||||||| |||||||| | ||||||||   ||||| ||||||||||||||||    
T  47015087 tctctctattgctttggtttttgtgccaatagatacttttctttgtaaaaatatgattgtcaatgtggttgtcaa---ccaaactgatgttcaaataaca 47015183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1795987 - 1795875
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| ||||||||||  |||| | |||||||||| ||||||||||||| |||||||| |||||||| || ||||||| ||    |||||    
T  1795987 ttatatttttactttatctctctattactttgatatttgtgccaatacatacttttcttggtaaaaatgtggttgtccatttagttgttaa---gcaaat 1795891  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  1795890 tgatgttcaaataaca 1795875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 19165423 - 19165325
Alignment:
Q  16 ctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt-caatatagttgtcaacctccaaattgatgttcaaataa 114  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| || || | |||||||    |||||||||||||||||||    
T  19165423 ctctctctattgttttggtttttgtgccaatacatatttttctttgtaaaaatatggttgtccattagatttgtcaa---acaaattgatgttcaaataa 19165327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 50980656 - 50980770
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||| ||||  |||| | |||||||||| |||||||||||||||||||||| || ||||| || |||||||   ||  |||||    
T  50980656 ttatatttttactttctctctatattactttgatatttgtgccaatacatacttttctttgtaaaaatgtgattgtccatttagttgt---ccagcaaat 50980752  T
Q  101 tgatgttcaaataacatt 118  Q
    ||||||| ||||||||||    
T  50980753 tgatgtttaaataacatt 50980770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44257735 - 44257626
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    |||||||||||||||||||||||||| ||||| | ||||||  || |||||||||||||| ||||||| || ||||| || ||||||||||    |||||    
T  44257735 ttatatttttactttctctctctattattttgatatttgtgttaatacatacttttctttataaaaatgtgattgtccatttagttgtcaa---acaaat 44257639  T
Q  101 tgatgttcaaata 113  Q
    |||||||||||||    
T  44257638 tgatgttcaaata 44257626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 46665200 - 46665110
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    ||||||||||| ||||||||||| ||  |||| ||||| |||||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  46665200 ttatatttttattttctctctcttttgctttgatttttatgccaatacatacttttctttgtaaatatatggttgtcaatttggttgtcaa 46665110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34757914 - 34757837
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||||||||  ||||||||||||||||||| ||||||    
T  34757914 ttatatttttactttctctttctattgatttgatttttgtgccaacacatgtttttctttgtaaaaatatgattgtca 34757837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34759188 - 34759111
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||||||||  ||||||||||||||||||| ||||||    
T  34759188 ttatatttttactttctctttctattgatttgatttttgtgccaacacatgtttttctttgtaaaaatatgattgtca 34759111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 11546906 - 11546794
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| | |||||||||| ||||| |||| ||||||||||| |||||||| || |  |||||||     ||||    
T  11546906 ttatatttttactttctctctctattactttgatatttgtgccaatacataattttttttgtaaaaatgtggttgtccatttgattgtcaa---gtaaat 11546810  T
Q  101 tgatgttcaaataaca 116  Q
    ||||||||||||||||    
T  11546809 tgatgttcaaataaca 11546794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 48649587 - 48649694
Alignment:
Q  4 tatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattga 103  Q
    |||||||||||| ||||||||||  |||| | |||||  ||| |||||||||||||||| ||||| |||||||| || ||||||||||    ||||||||    
T  48649587 tatttttactttttctctctattactttgatatttgtttcaatacatacttttctttgttaaaatgtggttgtctatttagttgtcaa---acaaattga 48649683  T
Q  104 tgttcaaataa 114  Q
    |||||||||||    
T  48649684 tgttcaaataa 48649694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 15522422 - 15522539
Alignment:
Q  3 atatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattg 102  Q
    ||||||||||||| ||||| ||||  ||||||||| ||| ||| ||||  ||||||||||||||| ||||||||| || | ||||||||    || ||||    
T  15522422 atatttttactttatctctatattgctttggttttcgtgtcaatacatgattttctttgtaaaaagatggttgtccatgtggttgtcaa---tcacattg 15522518  T
Q  103 atgttcaaataacattcctct 123  Q
    |||||||||||||||| ||||    
T  15522519 atgttcaaataacattgctct 15522539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36123465 - 36123399
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaa 67  Q
    ||||||||||||||||||||||||||  |||| ||||||||| ||  ||||||||||||||||||||    
T  36123465 ttatatttttactttctctctctattactttgatttttgtgcaaatgcatacttttctttgtaaaaa 36123399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31559604 - 31559680
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||||||||||||||||||||||||| |||||||||| |||  || || ||||||||||| |||| |||||| ||||    
T  31559604 ttatatttttactttctctctctattgttttggttttcgtgttaatacctacttttctttctaaatatatggctgtc 31559680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38792895 - 38792818
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgta-aaaatatggttgtcaa 79  Q
    |||||||||||||||||||||  |||  |||| ||||||| |||||||||||||||||||||| |||||||| |||||||    
T  38792895 ttatatttttactttctctct--attgctttgatttttgtaccaacacatacttttctttgtaaaaaatatgattgtcaa 38792818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 55609165 - 55609058
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatg 105  Q
    |||||| ||||||||||||||  |||| |||| ||||||| ||||| ||||||||||||||| | ||||||| || | ||||||||    ||||| ||||    
T  55609165 tttttattttctctctctattactttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttggttgtcaa---gcaaatagatg 55609069  T
Q  106 ttcaaataaca 116  Q
    |||||||||||    
T  55609068 ttcaaataaca 55609058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 193601 - 193710
Alignment:
Q  4 tatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattga 103  Q
    |||||||| ||||||||||||||  |||| |||| ||| ||| ||||| ||||||||||||||| ||| ||||| || | ||||||||    ||||| ||    
T  193601 tatttttattttctctctctattactttgattttcgtgtcaatacatatttttctttgtaaaaacatgattgtctatttggttgtcaa---gcaaataga 193697  T
Q  104 tgttcaaataaca 116  Q
    |||||||||||||    
T  193698 tgttcaaataaca 193710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31574945 - 31574855
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    ||||||||||| ||||||||||||||  |||| |||||||  ||| ||||  ||||||||||||||| ||||||||| || | ||||||||    
T  31574945 ttatatttttattttctctctctattgctttgatttttgtatcaatacatgattttctttgtaaaaagatggttgtccatgtggttgtcaa 31574855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 32223997 - 32224086
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaa 91  Q
    |||||||||||||||  ||||||||| ||||  ||||||||||||  |||| ||||||||||||||| |||||| || || ||||||||||    
T  32223997 ttatatttttacttttactctctattattttaatttttgtgccaatgcata-ttttctttgtaaaaacatggttatctatttagttgtcaa 32224086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 49372318 - 49372252
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaa 67  Q
    ||||||||||||||| ||||||||||  |||||||| | || || ||||||||||||||||||||||    
T  49372318 ttatatttttactttatctctctattgatttggtttgtatgtcagcacatacttttctttgtaaaaa 49372252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10250521 - 10250444
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||||||  || |  |||||||||||||| | |||||||||    
T  10250521 ttatctttttactttctctctctattgctttggtttttgtgccactacttcattttctttgtaaaattttggttgtca 10250444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26732290 - 26732367
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||| |||||||||||||| |||||||||||||||||  || |  |||||||||||||| | |||||||||    
T  26732290 ttatctttttattttctctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtca 26732367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12595636 - 12595560
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||| |||||||||||||||||||| |||||||||| ||| ||| || |||||| |||| ||||  ||||||||||    
T  12595636 ttatacttttactttctctctctattgttttggttttcgtgtcaatacctactttcctttataaatttatggttgtc 12595560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12387671 - 12387596
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 76  Q
    ||||||||||||||| ||||| |||| ||||| |||||||| ||| || |  ||||||||||||| ||||||||||    
T  12387671 ttatatttttactttgtctctttattgttttgatttttgtgtcaatacctcattttctttgtaaatatatggttgt 12387596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31468994 - 31468880
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||| | ||||||||  ||| ||||| ||| ||| ||||  ||||||||||||||| ||| ||||| |||| ||||||||    || ||    
T  31468994 ttatatttttactttatttctctattactttagttttcgtgtcaatacatgattttctttgtaaaaagatgattgtctatatggttgtcaa---tcacat 31468898  T
Q  101 tgatgttcaaataacatt 118  Q
    |||| |||||||||||||    
T  31468897 tgatattcaaataacatt 31468880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47288148 - 47288223
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 76  Q
    ||||||||||||||| |||||||||| |||||||||  ||| | | || ||||||||||||||||  |||||||||    
T  47288148 ttatatttttactttttctctctattgttttggtttccgtgtcgatacctacttttctttgtaaatttatggttgt 47288223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1627564 - 1627487
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| ||||||||||| |||||| ||  ||||||||||||||||| || |  |||||||||||||  |||||||||||    
T  1627564 ttatgtttttactttccctctctgttgctttggtttttgtgccaatacctcattttctttgtaaatttatggttgtca 1627487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10474118 - 10474041
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||||||| ||||||||||  |||| |||||||| ||| || |  |||||||||||||  |||||||||||    
T  10474118 ttatatttttactttttctctctattactttgatttttgtgtcaatacttctttttctttgtaaatttatggttgtca 10474041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 50831754 - 50831685
Alignment:
Q  8 tttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||||||||||||||||||  |||| |||||||| ||| || |  |||||||||||||| ||||||||||    
T  50831754 tttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtc 50831685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7632467 - 7632423
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaa 45  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||    
T  7632467 ttatatttttactttctctctctattgctttgatttttgtgccaa 7632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19232139 - 19232095
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaa 45  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||    
T  19232139 ttatatttttactttctctctctattgctttgatttttgtgccaa 19232095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 24575852 - 24575780
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||||||||||||||  ||||||||||||||||| || |  ||| |||| ||||| | |||||||||    
T  24575852 tttttactttctctctctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtca 24575780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25221730 - 25221654
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||| |||||||||||||| |||||| ||||||||||| | |||| ||||  ||| |||| ||||| ||||||||||    
T  25221730 ttatgtttttactttctctttctattgttttggtttttataccaatacatcttttcctttataaaattatggttgtc 25221654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52430943 - 52431007
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaa 65  Q
    |||| ||||||| || |||||||||| |||||||||||||| ||| || ||||||| ||||||||    
T  52430943 ttatgtttttaccttgtctctctattattttggtttttgtgtcaatacttacttttgtttgtaaa 52431007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 3316421 - 3316460
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaa 45  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  3316421 tttttactttctctctctattgttttggtttttatgccaa 3316460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37997319 - 37997394
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 76  Q
    |||| |||||||||||||||||||||  |||| |||||||| ||| || |  |||||||||||||| | |||||||    
T  37997319 ttatctttttactttctctctctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgt 37997394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 27371212 - 27371282
Alignment:
Q  7 ttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||||||||||||||||||| |||  |||||  || ||| || ||||||||||||||||  ||||||||||    
T  27371212 ttttactttctctctctattgtttgagttttcatgtcaatacctacttttctttgtaaatttatggttgtc 27371282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 37514133 - 37514059
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatactttt-ctttgtaaaaatatggttgtcaa 79  Q
    |||||||||| ||||||||||  |||| |||| ||||||| || ||||||| |||||||||  ||||||||||||    
T  37514133 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaatttatggttgtcaa 37514059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 23853805 - 23853854
Alignment:
Q  7 ttttactttctctctctattcttttggtttttgtgccaacacatactttt 56  Q
    ||||||||| |||||||||| ||||||||||||| | || ||||||||||    
T  23853805 ttttactttatctctctattattttggtttttgttcaaatacatactttt 23853854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27051092 - 27051015
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| ||||||| |||||||| |||| |||||||||||||| ||| |  |  |||||||||||||| | |||||||||    
T  27051092 ttatctttttaccttctctctttattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgtca 27051015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 50633631 - 50633699
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatat 70  Q
    ||||| |||| |||||||||||||||  ||||||||| ||| ||| ||||| |||| |||||||||||||    
T  50633631 ttataatttttctttctctctctattactttggttttcgtgtcaatacata-ttttttttgtaaaaatat 50633699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 51986107 - 51986184
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||| ||||||  ||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  51986107 ttatctttttactttctctatctatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtca 51986184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5249934 - 5249970
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttt 37  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  5249934 ttatgtttttactttctctctctattgttttggtttt 5249970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37297114 - 37297154
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||||||||||||||||||  |||||||||||||    
T  37297114 ttatctttttactttctctctctattgctttggtttttgtg 37297154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38134418 - 38134458
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||||||||| |||||||| ||||||||||||||    
T  38134418 ttatctttttactttctttctctattgttttggtttttgtg 38134458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40348859 - 40348899
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||||||||||||||||||  |||||||||||||    
T  40348859 ttatctttttactttctctctctattgctttggtttttgtg 40348899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50721750 - 50721710
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||||||||||||||||||||||| |  |||||||||||||    
T  50721750 ttatatttttactttctctctctactgctttggtttttgtg 50721710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50890079 - 50890035
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaa 45  Q
    |||||||||| |||||||||||||||  |||| ||||||||||||    
T  50890079 ttatatttttgctttctctctctattgctttgatttttgtgccaa 50890035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51324588 - 51324548
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| ||||||||||||||||||||| ||||||||| ||||    
T  51324588 ttatgtttttactttctctctctattattttggtttctgtg 51324548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 51852146 - 51852182
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgc 42  Q
    |||||||||| |||||||||| |||||||||||||||    
T  51852146 tttttactttatctctctattgttttggtttttgtgc 51852182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 12563 - 12674
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||||||||||||||||||  |||| | |||||||||| ||||||||||||| |||||||| |||||||| || ||||||||||    |||||    
T  12563 ttatatttttactttctctctctattactttgatatttgtgccaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaa---gcaaat 12659  T
Q  101 tgatgttcaaataac 115  Q
    |||||||||||||||    
T  12660 tgatgttcaaataac 12674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 13423034 - 13423110
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| ||||| |||||||||||||||||| ||||||    
T  13423034 ttatatttttactttctctctctattattttagtttttgtgccaatacatatttttctttgtaaaaatatagttgtc 13423110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16328705 - 16328628
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||| |||||| ||||||||||||| |||||||||||    
T  16328705 ttatatttttactttctctcactattgttttggttttcgtgccaatacatacatttctttgtaaaattatggttgtca 16328628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28630164 - 28630253
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtca 90  Q
    |||||| |||||||||||| ||||||  |||| ||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||    
T  28630164 ttatatatttactttctctttctattactttgatttttgtgccaacacatgcttttatttgtaaaaatatggttgtctatttagttgtca 28630253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16337928 - 16337851
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||||||||||||| ||||| | |||||||| ||| ||| |||||| ||||||||||||||| |||||||||    
T  16337928 ttatatttttactttctctcactattgtcttggttttcgtgtcaatacatacatttctttgtaaaaatgtggttgtca 16337851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1376430 - 1376544
Alignment:
Q  1 ttatatttttacttt--ctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaa 98  Q
    |||||||||||||||  |||||||||||  |||  | |||||| ||| ||||| |||||||||||||||| |||||||| || ||||||||||    |||    
T  1376430 ttatatttttactttatctctctctattacttttatatttgtgtcaatacatatttttctttgtaaaaatgtggttgtccatttagttgtcaa---gcaa 1376526  T
Q  99 attgatgttcaaataaca 116  Q
    ||||||||||||||||||    
T  1376527 attgatgttcaaataaca 1376544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1384178 - 1384292
Alignment:
Q  1 ttatatttttacttt--ctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaa 98  Q
    |||||||||||||||  |||||||||||  |||  | |||||| ||| ||||| |||||||||||||||| |||||||| || ||||||||||    |||    
T  1384178 ttatatttttactttatctctctctattacttttatatttgtgtcaatacatatttttctttgtaaaaatgtggttgtccatttagttgtcaa---gcaa 1384274  T
Q  99 attgatgttcaaataaca 116  Q
    ||||||||||||||||||    
T  1384275 attgatgttcaaataaca 1384292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 10944751 - 10944677
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttg 75  Q
    ||||||||||||||||| | | |||| ||||||||||||||| || |||||||| ||||||| ||||||||||||    
T  10944751 ttatatttttactttctttttttattattttggtttttgtgctaatacatacttatctttgttaaaatatggttg 10944677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16352166 - 16352101
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||||||||||||||||||| ||||| ||||||||||  |||||| |||||| |||||||||||||    
T  16352166 ttatatttttactttctctcactattgttttggttttcatgccaatacatacatttctttgtaaaa 16352101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16368052 - 16367975
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||||||||||||| ||||| | |||||||||||| ||| |||||| ||||||| ||||||| || ||||||    
T  16368052 ttatatttttactttctctcactattgtcttggtttttgtgtcaatacatacatttctttataaaaatgtgattgtca 16367975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 33651086 - 33651198
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||| ||| | |||||||| | || |||||||| |||| ||||| ||||||||||||||||||||||||| || |  |||||||    |||||    
T  33651086 ttatatttttattttttatctctattatcttagtttttgtaccaatacataattttctttgtaaaaatatggttgtctatttgattgtcaa---acaaat 33651182  T
Q  101 tgatgttcaaataaca 116  Q
     |||||||||||||||    
T  33651183 ggatgttcaaataaca 33651198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 16332854 - 16332787
Alignment:
Q  11 actttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||||||||| ||||| |||||||||| |||||||||||||| ||| |||||| |||| |||||||||    
T  16332854 actttctctcactattgttttggttttcgtgccaacacatacatttttttgtagaaatgtggttgtca 16332787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 2689068 - 2688952
Alignment:
Q  4 tatttttactttctctctctattcttttggtttttgtgccaacacatac-ttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattg 102  Q
    |||||||||||| |||||||||| ||||||||| ||||| || || ||| |||||||| | ||| |||||||||||  | |||||||||   ||||||||    
T  2689068 tatttttactttatctctctattgttttggtttatgtgcaaatacctactttttctttat-aaattatggttgtcacaaaagttgtcaa---ccaaattg 2688973  T
Q  103 a-tgttcaaataacattcctc 122  Q
    | |||||||||||||||||||    
T  2688972 attgttcaaataacattcctc 2688952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18737573 - 18737496
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||| |||| |||||||||||||| ||| || |  |||||||||||||| | |||||||||    
T  18737573 ttatctttttactttctctctttattgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgtca 18737496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 16365068 - 16365000
Alignment:
Q  10 tactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    ||||||||||| ||||| |||||||||| ||| ||| |||||| ||| ||||||||||| |||||||||    
T  16365068 tactttctctcactattgttttggttttcgtgtcaatacatacatttttttgtaaaaatgtggttgtca 16365000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24900839 - 24900883
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaa 45  Q
    ||||||||||||||||||||||||||  |||||||||||||||||    
T  24900839 ttatatttttactttctctctctattgctttggtttttgtgccaa 24900883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26595414 - 26595489
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 76  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||| || |  |||||||||||||| | |||||||    
T  26595414 ttatgtttttactttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgt 26595489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 552858 - 552935
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  ||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  552858 ttatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtca 552935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22079569 - 22079492
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||||||||||||||  |||| |||||||| ||| ||||  ||||||||| |||| | |||||||||    
T  22079569 ttatgtttttactttctctctctattgctttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtca 22079492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 31883302 - 31883233
Alignment:
Q  8 tttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    |||||||||||||||||||  |||| |||||||| ||| || |  |||||||||||||| ||||||||||    
T  31883302 tttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtc 31883233  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6271415 - 6271455
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  6271415 ttatgtttttactttctctctctattgttttggtttttgtg 6271455  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1156785 - 1156828
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||| |||||||||||||||||||||  ||||||||||||||||    
T  1156785 ttatttttttactttctctctctattactttggtttttgtgcca 1156828  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25811844 - 25811801
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||| |||||||||||||||||||||  ||||||||||||||||    
T  25811844 ttatctttttactttctctctctattgctttggtttttgtgcca 25811801  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 14818002 - 14818040
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgcca 44  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  14818002 tttttactttctctctttattgttttggtttttgtgcca 14818040  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 16336908 - 16336958
Alignment:
Q  17 tctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaa 67  Q
    ||||||||||  |||| |||| ||| |||||||||||||||||||||||||    
T  16336908 tctctctattactttgcttttcgtgtcaacacatacttttctttgtaaaaa 16336958  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 27612940 - 27613052
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaat 100  Q
    ||||||||||| | ||| | ||||||  |||| |||| ||| ||| ||||| ||||||||||||| ||||||||||| || |  |||||||    |||||    
T  27612940 ttatatttttattatctttttctattactttgattttcgtgtcaatacatatttttctttgtaaacatatggttgtccatttgattgtcaa---acaaat 27613036  T
Q  101 tgatgttcaaataaca 116  Q
     |||||||||||||||    
T  27613037 agatgttcaaataaca 27613052  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 31869138 - 31869199
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaa 67  Q
    |||||| ||||||||||||||  |||| |||| ||||||| ||||| ||| |||||||||||    
T  31869138 tttttattttctctctctattactttgattttcgtgccaatacatattttcctttgtaaaaa 31869199  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32316934 - 32316857
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||||||||| ||||||||||  ||||||||||||| ||  || |  |||||||||||||| | |||||||||    
T  32316934 ttatctttttactttatctctctattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtca 32316857  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17551384 - 17551344
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| |||||||||| |||||||||| ||||||||||||||    
T  17551384 ttatgtttttactttatctctctattgttttggtttttgtg 17551344  T

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Target: scaffold0662 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 1226 - 1324
Alignment:
Q  17 tctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtcaacctccaaattgatgttcaaataaca 116  Q
    ||||||||||  ||||||||||||||||| | ||||||||||||||||||||||| |||||||| | ||||||||   ||||| ||||||||||||||||    
T  1226 tctctctattgctttggtttttgtgccaatagatacttttctttgtaaaaatatgattgtcaatgtggttgtcaa---ccaaactgatgttcaaataaca 1322  T

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Target: scaffold0013 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 94887 - 94811
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtc 77  Q
    ||||| ||||||||||||||||||||  |||| ||||||||| || ||||| |||||||||||||||||| ||||||    
T  94887 ttataattttactttctctctctattactttgatttttgtgctaatacatatttttctttgtaaaaatatagttgtc 94811  T

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Target: scaffold0687 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 7125 - 7212
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatatagttgtca 90  Q
    ||||||||||||||||||||||||||  |||| | ||| || |||  |||||||||||||||  |||| ||||||||||| |||||||||    
T  7125 ttatatttttactttctctctctattactttgatatttatgtcaatgcatacttttctttgt--aaatgtggttgtcaatttagttgtca 7212  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 246726 - 246789
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||||||||||||||||||||  |||  ||||||||| |||||||  |||||||||||||||||||    
T  246726 ttatatttttactttctctct--attactttggttttcgtgccaaatcatacttttctttgtaaaa 246789  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 76625 - 76548
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 78  Q
    |||| |||| ||||||||||||||||  ||||||||||||||||  || |  ||| |||||||||| | |||||||||    
T  76625 ttatcttttcactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtca 76548  T

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Target: scaffold0519 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 11852 - 11912
Alignment:
Q  6 tttttactttctctctctattcttttggtttttgtgccaacacatacttttctttgtaaaa 66  Q
    |||||| ||||||||||||||  ||||||||||||| ||| || |  ||||||||||||||    
T  11852 tttttattttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaa 11912  T

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Target: scaffold0098 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 49360 - 49400
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| ||||||||||||| ||||||| ||||||||||||||    
T  49360 ttatctttttactttctcactctattattttggtttttgtg 49400  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10969 - 10929
Alignment:
Q  1 ttatatttttactttctctctctattcttttggtttttgtg 41  Q
    |||| ||||||||||||||||||||| ||||| ||||||||    
T  10969 ttatctttttactttctctctctattattttgatttttgtg 10929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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