View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18227_low_40 (Length: 251)

Name: NF18227_low_40
Description: NF18227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18227_low_40
NF18227_low_40
[»] chr8 (16 HSPs)
chr8 (1-239)||(9937984-9938222)
chr8 (167-225)||(18897162-18897220)
chr8 (169-225)||(16852338-16852394)
chr8 (174-225)||(2203495-2203546)
chr8 (174-225)||(3624583-3624634)
chr8 (170-224)||(28560606-28560660)
chr8 (174-224)||(28566108-28566158)
chr8 (174-224)||(28573731-28573781)
chr8 (169-225)||(19703509-19703565)
chr8 (174-225)||(12988431-12988482)
chr8 (174-225)||(20994480-20994531)
chr8 (174-225)||(26688868-26688919)
chr8 (169-225)||(5264542-5264598)
chr8 (174-210)||(18540301-18540337)
chr8 (174-222)||(22268958-22269006)
chr8 (174-210)||(23874419-23874455)
[»] chr2 (11 HSPs)
chr2 (168-225)||(29503268-29503325)
chr2 (170-225)||(33962806-33962861)
chr2 (168-224)||(42602551-42602607)
chr2 (174-225)||(16918600-16918651)
chr2 (174-225)||(42327417-42327468)
chr2 (169-225)||(3697421-3697477)
chr2 (169-225)||(19322766-19322822)
chr2 (174-225)||(42922417-42922468)
chr2 (174-225)||(43964010-43964061)
chr2 (169-225)||(1729814-1729870)
chr2 (177-225)||(12982518-12982566)
[»] chr7 (15 HSPs)
chr7 (171-225)||(20952171-20952225)
chr7 (174-225)||(25021357-25021408)
chr7 (178-225)||(25956314-25956361)
chr7 (174-225)||(26459432-26459483)
chr7 (175-221)||(44146577-44146623)
chr7 (171-225)||(45976945-45976999)
chr7 (165-225)||(17041034-17041094)
chr7 (174-222)||(42836026-42836074)
chr7 (174-222)||(45559203-45559251)
chr7 (174-225)||(43215187-43215238)
chr7 (174-224)||(33869468-33869518)
chr7 (173-225)||(15905695-15905747)
chr7 (174-210)||(39499756-39499792)
chr7 (174-210)||(39631847-39631883)
chr7 (170-210)||(43663132-43663172)
[»] chr6 (5 HSPs)
chr6 (174-225)||(12188325-12188376)
chr6 (175-222)||(33724700-33724747)
chr6 (174-222)||(22696-22744)
chr6 (193-225)||(13113983-13114015)
chr6 (169-205)||(15497079-15497115)
[»] chr5 (7 HSPs)
chr5 (174-225)||(21549159-21549210)
chr5 (168-225)||(30883220-30883277)
chr5 (174-225)||(16457813-16457864)
chr5 (174-225)||(22737085-22737136)
chr5 (175-225)||(16436622-16436671)
chr5 (174-208)||(26078090-26078124)
chr5 (171-207)||(14804710-14804746)
[»] chr4 (5 HSPs)
chr4 (174-225)||(37109373-37109424)
chr4 (169-225)||(21344815-21344871)
chr4 (174-225)||(29195098-29195149)
chr4 (193-221)||(26895139-26895167)
chr4 (173-225)||(39030135-39030187)
[»] chr1 (15 HSPs)
chr1 (174-225)||(9165217-9165268)
chr1 (174-225)||(15581163-15581214)
chr1 (182-225)||(31605870-31605913)
chr1 (174-225)||(31794286-31794337)
chr1 (174-225)||(36371473-36371524)
chr1 (174-225)||(44486179-44486230)
chr1 (174-225)||(45235401-45235452)
chr1 (167-225)||(4566544-4566602)
chr1 (175-225)||(4824975-4825025)
chr1 (168-225)||(40257396-40257453)
chr1 (171-207)||(2379425-2379461)
chr1 (173-225)||(17410233-17410285)
chr1 (197-225)||(22188827-22188855)
chr1 (174-222)||(39012294-39012342)
chr1 (174-225)||(50901584-50901636)
[»] chr3 (4 HSPs)
chr3 (171-221)||(40372142-40372192)
chr3 (174-221)||(11092195-11092242)
chr3 (170-225)||(31295454-31295509)
chr3 (174-225)||(42799769-42799820)
[»] scaffold0221 (1 HSPs)
scaffold0221 (174-225)||(2931-2982)
[»] scaffold0211 (1 HSPs)
scaffold0211 (174-225)||(24056-24107)
[»] scaffold0002 (2 HSPs)
scaffold0002 (174-225)||(94993-95044)
scaffold0002 (174-207)||(459886-459919)


Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 9938222 - 9937984
Alignment:
Q  1 tcatcgaactggtaatttctgagtgttacttatatatatttcagatttataatatgaaacatgttacttttgtttggactattttaaaattcaaaaagtt 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9938222 tcatcgaactggtaatttctgagtgttacttatacatatttcagatttataatatgaaacatgttacttttgtttggactattttaaaattcaaaaagtt 9938123  T
Q  101 ttgaaacggaaattacaataatttaatgtcaaaacacatggactttgagtttttaaatattccgattataaatccacttgggttggcctaatggtattgg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9938122 ttgaaacggaaattacaataatttaatgtcaaaacacatggactttgagtttttaaatattccgattataaatccacttgggttggtctaatggtattgg 9938023  T
Q  201 tttgggaccttgaagtgtgctcctcatctcctgtttcat 239  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  9938022 tttgggaccttgaagtgtgctcctcgtctcatgtttcat 9937984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 18897162 - 18897220
Alignment:
Q  167 tataaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||  ||||||||||||    
T  18897162 tataaacccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctc 18897220  T

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Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 16852338 - 16852394
Alignment:
Q  169 taaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||| ||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  16852338 taaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 16852394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 2203495 - 2203546
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  2203495 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 2203546  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 3624583 - 3624634
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  3624583 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 3624634  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 28560606 - 28560660
Alignment:
Q  170 aaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcct 224  Q
    ||||||||||||||||  ||| ||||||||||||||||||||  |||||||||||    
T  28560606 aaatccacttgggttgaactagtggtattggtttgggaccttagagtgtgctcct 28560660  T

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Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 28566108 - 28566158
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcct 224  Q
    |||||||||||| |||| ||||||||||||||||||||  |||||||||||    
T  28566108 ccacttgggttgacctagtggtattggtttgggaccttagagtgtgctcct 28566158  T

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Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 28573731 - 28573781
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcct 224  Q
    |||||||||||| |||| ||||||||||||||||||||  |||||||||||    
T  28573731 ccacttgggttgacctagtggtattggtttgggaccttagagtgtgctcct 28573781  T

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Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 19703565 - 19703509
Alignment:
Q  169 taaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||| ||||||||||||||||| ||||||||| |||||||||   ||||||||||||    
T  19703565 taaacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctc 19703509  T

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Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 12988431 - 12988482
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||| |||||||| ||||||||| |||| |||| ||||||||||||||    
T  12988431 ccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctc 12988482  T

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Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 20994531 - 20994480
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||  ||||||||| | ||||||||||||    
T  20994531 ccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctc 20994480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 26688868 - 26688919
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||  |||| |||| ||||||||||| ||||||||||||    
T  26688868 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 26688919  T

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Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 5264542 - 5264598
Alignment:
Q  169 taaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||| ||||||||||||||||| ||||||||| |||| |||| | | ||||||||||    
T  5264542 taaacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctc 5264598  T

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Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 18540301 - 18540337
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggacct 210  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  18540301 ccacttgggttggcctagtggtattggcttgggacct 18540337  T

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Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 22269006 - 22268958
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctc 222  Q
    ||||||||||||||||  |||| |||| ||||||||||| |||||||||    
T  22269006 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctc 22268958  T

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Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 23874455 - 23874419
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggacct 210  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  23874455 ccacttgggttggcctagtggtattggcttgggacct 23874419  T

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Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 29503268 - 29503325
Alignment:
Q  168 ataaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  29503268 ataaacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctc 29503325  T

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Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 33962861 - 33962806
Alignment:
Q  170 aaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||||||||||||||||||| ||||||||||||| || | ||||||||||||    
T  33962861 aaatccacttgggttggcctaatgatattggtttgggaactgggagtgtgctcctc 33962806  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 42602551 - 42602607
Alignment:
Q  168 ataaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcct 224  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||| | |||||||||||    
T  42602551 ataaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcct 42602607  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 16918651 - 16918600
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| |||||||||||||||| || | ||||||||||||    
T  16918651 ccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctc 16918600  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 42327468 - 42327417
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  42327468 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 42327417  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 3697477 - 3697421
Alignment:
Q  169 taaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||| ||||||||||||| || |||||||||| ||||||||||| || |||||||||    
T  3697477 taaacccacttgggttggtctgatggtattggcttgggaccttggagagtgctcctc 3697421  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 19322766 - 19322822
Alignment:
Q  169 taaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||| ||||||||||||  ||| ||||||||||||||||||| | ||||||||||||    
T  19322766 taaacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctc 19322822  T

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Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 42922417 - 42922468
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| |||| |||| | ||||||||||||    
T  42922417 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctc 42922468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 43964061 - 43964010
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||| ||| | || |||||||||||||||| ||||||||||||    
T  43964061 ccacttgggttggtctagtagtgttggtttgggaccttggagtgtgctcctc 43964010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 1729814 - 1729870
Alignment:
Q  169 taaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||| ||||||||||||| ||| ||||||||| ||||||| | | ||||||||||||    
T  1729814 taaacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctc 1729870  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 12982566 - 12982518
Alignment:
Q  177 cttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||||||||| ||||||||| ||| |||||  |||||||||||||    
T  12982566 cttgggttggcctagtggtattggattgagacctgcaagtgtgctcctc 12982518  T

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Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 20952225 - 20952171
Alignment:
Q  171 aatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||| ||| |||||||||||||||||||| | ||||||||||||    
T  20952225 aatccacttgggttgacctgatggtattggtttgggacctgggagtgtgctcctc 20952171  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 25021408 - 25021357
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  25021408 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 25021357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 25956361 - 25956314
Alignment:
Q  178 ttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  25956361 ttgggttggcctagtggtattggcttgggaccttggagtgtgctcctc 25956314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 26459483 - 26459432
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  26459483 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 26459432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 44146623 - 44146577
Alignment:
Q  175 cacttgggttggcctaatggtattggtttgggaccttgaagtgtgct 221  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||||    
T  44146623 cacttgggttggcctagtggtgttggtttgggaccttggagtgtgct 44146577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 45976999 - 45976945
Alignment:
Q  171 aatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||||||||||||||| ||||||||| ||| ||||| | ||||||||||||    
T  45976999 aatccacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcctc 45976945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 17041094 - 17041034
Alignment:
Q  165 attataaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||| ||||||||||||| ||| ||| ||||| |||||| || ||||||||||||||    
T  17041094 attataaacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctc 17041034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 42836074 - 42836026
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctc 222  Q
    ||||||||||||||||| ||||||||| ||||||||| | |||||||||    
T  42836074 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctc 42836026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 45559203 - 45559251
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctc 222  Q
    ||||||||||||||||| ||||||||| |||| |||||| |||||||||    
T  45559203 ccacttgggttggcctagtggtattggcttggaaccttggagtgtgctc 45559251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 43215187 - 43215238
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||| ||| ||||||||| ||||||||| | ||||||||||||    
T  43215187 ccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctc 43215238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 33869518 - 33869468
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcct 224  Q
    ||||||||||||||||| | ||||||| ||| ||||| |||||||||||||    
T  33869518 ccacttgggttggcctagtagtattggcttgagacctggaagtgtgctcct 33869468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 15905747 - 15905695
Alignment:
Q  173 tccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||||||||||||   |||||||| ||||||||| | ||||||||||||    
T  15905747 tccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctc 15905695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 39499792 - 39499756
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggacct 210  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  39499792 ccacttgggttggcctagtggtattggcttgggacct 39499756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 39631847 - 39631883
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggacct 210  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  39631847 ccacttgggttggcctagtggtattggcttgggacct 39631883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 43663172 - 43663132
Alignment:
Q  170 aaatccacttgggttggcctaatggtattggtttgggacct 210  Q
    |||||||||||||||||||| |||||||||  |||||||||    
T  43663172 aaatccacttgggttggcctgatggtattgacttgggacct 43663132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 12188376 - 12188325
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  12188376 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 12188325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 33724747 - 33724700
Alignment:
Q  175 cacttgggttggcctaatggtattggtttgggaccttgaagtgtgctc 222  Q
    |||||||| |||||||||||| |||||||||||||||  |||||||||    
T  33724747 cacttgggatggcctaatggtgttggtttgggaccttagagtgtgctc 33724700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 22744 - 22696
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctc 222  Q
    ||||||||||||| ||| |||| |||| ||||||||||| |||||||||    
T  22744 ccacttgggttgggctagtggttttggcttgggaccttggagtgtgctc 22696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 13114015 - 13113983
Alignment:
Q  193 ggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||| ||||||||||||||||||||||||    
T  13114015 ggtattggcttgggaccttgaagtgtgctcctc 13113983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 15497115 - 15497079
Alignment:
Q  169 taaatccacttgggttggcctaatggtattggtttgg 205  Q
    |||| |||||||||||||||||||| |||||||||||    
T  15497115 taaacccacttgggttggcctaatgatattggtttgg 15497079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 21549210 - 21549159
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  21549210 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 21549159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 30883277 - 30883220
Alignment:
Q  168 ataaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||| ||||||||||||| ||| ||||||||| ||||||||| | ||||||||||||    
T  30883277 ataaacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctc 30883220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 16457813 - 16457864
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||| |||||||||  ||||||||| ||||||||||| ||||||||||||    
T  16457813 ccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctc 16457864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 22737085 - 22737136
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||| ||| ||||||||| ||||||| | ||||||||||||||    
T  22737085 ccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctc 22737136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 16436622 - 16436671
Alignment:
Q  175 cacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||||||||||| ||||||||| |||||| |||| ||||||||||||    
T  16436622 cacttgggttggcctagtggtattggcttggga-cttggagtgtgctcctc 16436671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 26078124 - 26078090
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggac 208  Q
    ||||||||||||||||| |||||||||||||||||    
T  26078124 ccacttgggttggcctagtggtattggtttgggac 26078090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 14804746 - 14804710
Alignment:
Q  171 aatccacttgggttggcctaatggtattggtttggga 207  Q
    |||||||||||||||||||| || |||||||||||||    
T  14804746 aatccacttgggttggcctagtgttattggtttggga 14804710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 37109424 - 37109373
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  37109424 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 37109373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 21344815 - 21344871
Alignment:
Q  169 taaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||| |||||||||||||||| ||| | |||| ||||||||||| ||||||||||||    
T  21344815 taaacccacttgggttggcctgatgatgttggcttgggaccttggagtgtgctcctc 21344871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 29195098 - 29195149
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||  |||| |||| ||||||||||| ||||||||||||    
T  29195098 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 29195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 26895139 - 26895167
Alignment:
Q  193 ggtattggtttgggaccttgaagtgtgct 221  Q
    |||||||||||||||||||||||||||||    
T  26895139 ggtattggtttgggaccttgaagtgtgct 26895167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 39030187 - 39030135
Alignment:
Q  173 tccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||| ||||||||||  |||| |||| ||||||||||| ||||||||||||    
T  39030187 tccactggggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 39030135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 9165268 - 9165217
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  9165268 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 9165217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 15581214 - 15581163
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||  |||| |||| ||||||||||| ||||||||||||    
T  15581214 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 15581163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 31605913 - 31605870
Alignment:
Q  182 gttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||    
T  31605913 gttggcctgatggtgttggcttgggaccttgaagtgtgctcctc 31605870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 31794337 - 31794286
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| ||||||| | | ||||||||||||    
T  31794337 ccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctc 31794286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 36371473 - 36371524
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| |||| |||| | ||||||||||||    
T  36371473 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctc 36371524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 44486230 - 44486179
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||| |||||||| |||| ||||||||| |||||| ||||||||||||    
T  44486230 ccacttggattggcctagtggtgttggtttggaaccttggagtgtgctcctc 44486179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 45235452 - 45235401
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||| || |||||||||||||||||| | | ||||||||||||    
T  45235452 ccacttgggttggtctgatggtattggtttgggacttgggagtgtgctcctc 45235401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 4566544 - 4566602
Alignment:
Q  167 tataaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||| ||||||||||||||||| || |||||| |||| |||| | ||||||||||||    
T  4566544 tataaacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctc 4566602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 4824975 - 4825025
Alignment:
Q  175 cacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||||||| || ||||| |||| ||||||||||| ||||||||||||    
T  4824975 cacttgggttggtctgatggtgttggcttgggaccttggagtgtgctcctc 4825025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 40257396 - 40257453
Alignment:
Q  168 ataaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||| ||||||||||||||||  ||||||||| ||| ||||| | ||||||||||||    
T  40257396 ataaacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctc 40257453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 2379425 - 2379461
Alignment:
Q  171 aatccacttgggttggcctaatggtattggtttggga 207  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  2379425 aatccacttgggttgacctagtggtattggtttggga 2379461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 17410233 - 17410285
Alignment:
Q  173 tccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||| ||||||||||||| |||||||||||||||| || | |||||| |||||    
T  17410233 tccaattgggttggcctagtggtattggtttgggatctgggagtgtggtcctc 17410285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 22188855 - 22188827
Alignment:
Q  197 ttggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||||||||||||||||||||||||    
T  22188855 ttggtttgggaccttgaagtgtgctcctc 22188827  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 39012294 - 39012342
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctc 222  Q
    |||||| |||||||||| |||| |||| ||||||||||| |||||||||    
T  39012294 ccactttggttggcctagtggtgttggcttgggaccttggagtgtgctc 39012342  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 50901584 - 50901636
Alignment:
Q  174 ccacttgggttggcctaatggt-attggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| |||| ||||| ||||||||| | ||||||||||||    
T  50901584 ccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctc 50901636  T

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Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 40372142 - 40372192
Alignment:
Q  171 aatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgct 221  Q
    ||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  40372142 aatccacttaggttggtctgatggtattggtttgggaccttgaagggtgct 40372192  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 11092242 - 11092195
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgct 221  Q
    ||||||||||||||||| |||| |||| ||||||||||| ||||||||    
T  11092242 ccacttgggttggcctagtggtgttggcttgggaccttgtagtgtgct 11092195  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 31295454 - 31295509
Alignment:
Q  170 aaatccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||||||||||||  | ||||||||| ||||||| || ||||||||||||||    
T  31295454 aaatccacttgggttggtttgatggtattgatttgggatctagaagtgtgctcctc 31295509  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 42799820 - 42799769
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||  |||| |||| ||||||||||| ||||||||||||    
T  42799820 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 42799769  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 2982 - 2931
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    |||||||||||||| |  |||| ||||||||||||||||||||||| |||||    
T  2982 ccacttgggttggcttggtggttttggtttgggaccttgaagtgtgatcctc 2931  T

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Target: scaffold0211 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 24056 - 24107
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||||||||||||  ||||||| | | ||||||||||||    
T  24056 ccacttgggttggcctaatggtattgacttgggacttaggagtgtgctcctc 24107  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 95044 - 94993
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttgggaccttgaagtgtgctcctc 225  Q
    ||||||||||||||||| ||||||||| |||| |||| | ||||||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctc 94993  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 459886 - 459919
Alignment:
Q  174 ccacttgggttggcctaatggtattggtttggga 207  Q
    |||||| |||||||||||||||||||||||||||    
T  459886 ccactttggttggcctaatggtattggtttggga 459919  T

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