View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18228_high_5 (Length: 557)

Name: NF18228_high_5
Description: NF18228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18228_high_5
NF18228_high_5
[»] chr7 (43 HSPs)
chr7 (19-546)||(18785716-18786242)
chr7 (19-77)||(13095905-13095963)
chr7 (19-80)||(38578868-38578929)
chr7 (19-80)||(27028326-27028387)
chr7 (21-80)||(48244357-48244416)
chr7 (19-80)||(22993368-22993429)
chr7 (19-80)||(48804730-48804791)
chr7 (17-77)||(5039422-5039482)
chr7 (20-80)||(14650365-14650425)
chr7 (17-80)||(1605986-1606049)
chr7 (17-80)||(21530793-21530856)
chr7 (17-80)||(27875089-27875152)
chr7 (17-79)||(38988945-38989006)
chr7 (19-77)||(45960007-45960065)
chr7 (19-80)||(5069816-5069877)
chr7 (19-80)||(8734687-8734748)
chr7 (23-80)||(39474991-39475048)
chr7 (19-80)||(43346780-43346841)
chr7 (19-80)||(43861973-43862034)
chr7 (18-76)||(32768983-32769041)
chr7 (19-80)||(3603404-3603465)
chr7 (20-77)||(16802171-16802228)
chr7 (19-80)||(34659273-34659334)
chr7 (19-76)||(37514968-37515025)
chr7 (19-80)||(41945520-41945581)
chr7 (19-80)||(48551904-48551965)
chr7 (19-75)||(28396166-28396222)
chr7 (21-80)||(26423289-26423347)
chr7 (22-80)||(10047877-10047935)
chr7 (19-80)||(24983419-24983481)
chr7 (19-80)||(3353471-3353532)
chr7 (19-80)||(4195203-4195264)
chr7 (17-54)||(4228781-4228818)
chr7 (19-80)||(17748383-17748444)
chr7 (19-80)||(22974014-22974075)
chr7 (19-48)||(36619287-36619316)
chr7 (19-80)||(42210263-42210324)
chr7 (19-80)||(47341923-47341984)
chr7 (40-80)||(10317747-10317787)
chr7 (40-80)||(22268042-22268082)
chr7 (20-80)||(32823291-32823351)
chr7 (28-80)||(34127646-34127698)
chr7 (21-77)||(39420886-39420942)
[»] chr3 (58 HSPs)
chr3 (130-546)||(1624885-1625301)
chr3 (130-546)||(1607878-1608294)
chr3 (130-546)||(1631368-1631784)
chr3 (130-546)||(10818761-10819174)
chr3 (19-80)||(54261270-54261331)
chr3 (19-80)||(3507535-3507596)
chr3 (19-77)||(44064588-44064646)
chr3 (19-80)||(28572213-28572274)
chr3 (19-80)||(29127963-29128024)
chr3 (19-77)||(42412782-42412837)
chr3 (19-71)||(45402362-45402414)
chr3 (17-77)||(55069684-55069744)
chr3 (17-80)||(45877496-45877559)
chr3 (19-80)||(7310705-7310766)
chr3 (19-80)||(15320230-15320291)
chr3 (19-80)||(26043856-26043917)
chr3 (19-80)||(47219188-47219249)
chr3 (19-80)||(49021205-49021266)
chr3 (17-77)||(24506653-24506713)
chr3 (26-80)||(36043676-36043730)
chr3 (19-80)||(2668105-2668166)
chr3 (19-80)||(3136696-3136757)
chr3 (27-80)||(7328895-7328948)
chr3 (19-76)||(26361973-26362030)
chr3 (19-80)||(30767249-30767310)
chr3 (19-80)||(35316000-35316061)
chr3 (19-80)||(49543563-49543624)
chr3 (19-80)||(54237492-54237553)
chr3 (24-80)||(7650276-7650332)
chr3 (19-79)||(26207804-26207864)
chr3 (24-80)||(53649776-53649832)
chr3 (17-80)||(10043724-10043787)
chr3 (21-76)||(47164152-47164207)
chr3 (19-77)||(50405608-50405666)
chr3 (23-80)||(4638202-4638259)
chr3 (19-80)||(6462456-6462517)
chr3 (19-80)||(8362621-8362682)
chr3 (19-80)||(13893970-13894031)
chr3 (19-80)||(25295004-25295065)
chr3 (19-80)||(29762157-29762218)
chr3 (19-76)||(41630518-41630575)
chr3 (19-80)||(43330734-43330795)
chr3 (19-80)||(47471875-47471936)
chr3 (19-80)||(47749107-47749168)
chr3 (19-80)||(51060283-51060344)
chr3 (17-80)||(29195321-29195384)
chr3 (17-80)||(35998573-35998636)
chr3 (19-49)||(39849115-39849145)
chr3 (19-77)||(40660332-40660390)
chr3 (19-65)||(40944927-40944972)
chr3 (19-77)||(50753346-50753404)
chr3 (19-80)||(2029269-2029330)
chr3 (23-80)||(19147009-19147066)
chr3 (19-80)||(23511611-23511672)
chr3 (19-80)||(29135957-29136018)
chr3 (19-48)||(33251706-33251735)
chr3 (19-48)||(49198395-49198424)
chr3 (19-80)||(51682956-51683017)
[»] scaffold0291 (1 HSPs)
scaffold0291 (19-80)||(6902-6963)
[»] chr6 (29 HSPs)
chr6 (19-80)||(21898696-21898757)
chr6 (19-80)||(5253224-5253285)
chr6 (19-80)||(9633626-9633687)
chr6 (17-80)||(14107359-14107422)
chr6 (18-77)||(14326044-14326103)
chr6 (18-77)||(14419054-14419113)
chr6 (18-80)||(6606098-6606160)
chr6 (19-80)||(14783421-14783482)
chr6 (19-80)||(30788854-30788915)
chr6 (19-80)||(8611975-8612036)
chr6 (19-80)||(8932709-8932770)
chr6 (19-80)||(8944175-8944236)
chr6 (19-80)||(19089546-19089607)
chr6 (19-80)||(30410493-30410554)
chr6 (17-80)||(8149798-8149861)
chr6 (17-80)||(13468979-13469042)
chr6 (18-77)||(17114901-17114960)
chr6 (25-75)||(15643840-15643890)
chr6 (19-80)||(3601132-3601193)
chr6 (19-80)||(12606478-12606539)
chr6 (19-80)||(12635862-12635923)
chr6 (19-80)||(13036005-13036066)
chr6 (19-80)||(31129225-31129286)
chr6 (25-80)||(8938765-8938820)
chr6 (19-77)||(13391334-13391392)
chr6 (19-80)||(5029865-5029926)
chr6 (19-80)||(29333140-29333201)
chr6 (19-80)||(29444766-29444827)
chr6 (31-83)||(4596181-4596233)
[»] chr2 (47 HSPs)
chr2 (19-80)||(7747318-7747379)
chr2 (19-80)||(41220679-41220740)
chr2 (19-80)||(10823104-10823165)
chr2 (19-80)||(12455354-12455415)
chr2 (19-76)||(39201513-39201570)
chr2 (19-80)||(44945637-44945698)
chr2 (19-80)||(9360749-9360810)
chr2 (19-80)||(25540405-25540466)
chr2 (19-80)||(33005795-33005856)
chr2 (19-80)||(34346288-34346349)
chr2 (21-80)||(44139530-44139589)
chr2 (19-80)||(2528342-2528403)
chr2 (19-80)||(3811692-3811753)
chr2 (19-80)||(8410175-8410236)
chr2 (19-80)||(16325639-16325700)
chr2 (19-80)||(18649027-18649088)
chr2 (19-80)||(20116613-20116674)
chr2 (19-80)||(22593178-22593238)
chr2 (19-80)||(28616380-28616441)
chr2 (19-80)||(38005446-38005507)
chr2 (19-80)||(41031907-41031968)
chr2 (19-80)||(44773307-44773368)
chr2 (19-71)||(10026626-10026678)
chr2 (19-71)||(10046487-10046539)
chr2 (24-80)||(18902531-18902587)
chr2 (19-72)||(331545-331598)
chr2 (19-80)||(2550912-2550973)
chr2 (19-80)||(3643888-3643949)
chr2 (19-76)||(6358156-6358213)
chr2 (19-80)||(12864268-12864329)
chr2 (19-80)||(14169610-14169671)
chr2 (19-80)||(21641994-21642055)
chr2 (19-76)||(27725984-27726041)
chr2 (19-80)||(35946782-35946843)
chr2 (19-80)||(38962807-38962868)
chr2 (29-77)||(792208-792256)
chr2 (17-73)||(26805338-26805394)
chr2 (17-48)||(24179610-24179641)
chr2 (17-80)||(34722722-34722785)
chr2 (19-77)||(7787100-7787158)
chr2 (19-77)||(10669636-10669694)
chr2 (19-80)||(20612535-20612597)
chr2 (17-51)||(21180344-21180378)
chr2 (19-73)||(41187893-41187947)
chr2 (19-80)||(16034981-16035042)
chr2 (19-76)||(28525460-28525517)
chr2 (19-47)||(13026445-13026473)
[»] chr5 (40 HSPs)
chr5 (22-80)||(28857194-28857252)
chr5 (17-77)||(39099783-39099843)
chr5 (19-80)||(5731921-5731982)
chr5 (19-80)||(14728128-14728189)
chr5 (27-80)||(28857002-28857055)
chr5 (19-80)||(42086372-42086433)
chr5 (19-80)||(9805049-9805110)
chr5 (17-80)||(8513562-8513625)
chr5 (17-55)||(7308390-7308428)
chr5 (19-80)||(1538476-1538537)
chr5 (19-80)||(2485241-2485302)
chr5 (19-80)||(9812917-9812978)
chr5 (19-80)||(12705059-12705120)
chr5 (19-80)||(12766176-12766237)
chr5 (19-80)||(13664305-13664366)
chr5 (19-80)||(19572769-19572830)
chr5 (19-80)||(20525883-20525944)
chr5 (19-80)||(20682618-20682679)
chr5 (19-80)||(37263285-37263346)
chr5 (19-80)||(40117460-40117521)
chr5 (21-80)||(23383704-23383763)
chr5 (17-80)||(41163461-41163524)
chr5 (17-80)||(42291506-42291569)
chr5 (23-77)||(9168257-9168311)
chr5 (19-77)||(24463890-24463948)
chr5 (19-80)||(4016256-4016317)
chr5 (19-80)||(14588618-14588679)
chr5 (19-80)||(20255414-20255475)
chr5 (19-80)||(38897720-38897781)
chr5 (19-80)||(42861219-42861280)
chr5 (29-80)||(13887510-13887561)
chr5 (17-48)||(14974357-14974388)
chr5 (17-80)||(28862868-28862931)
chr5 (34-80)||(21487674-21487720)
chr5 (19-77)||(25452970-25453027)
chr5 (19-80)||(5079376-5079436)
chr5 (19-80)||(7866626-7866687)
chr5 (19-80)||(27648426-27648487)
chr5 (19-52)||(30995166-30995199)
chr5 (19-80)||(43399173-43399234)
[»] chr8 (27 HSPs)
chr8 (19-80)||(10927654-10927715)
chr8 (19-80)||(45521216-45521277)
chr8 (19-80)||(15884557-15884618)
chr8 (19-80)||(4479297-4479358)
chr8 (19-80)||(6100520-6100581)
chr8 (17-76)||(16291208-16291267)
chr8 (19-80)||(2964124-2964185)
chr8 (19-80)||(8997545-8997606)
chr8 (19-80)||(11298268-11298329)
chr8 (19-80)||(43032949-43033010)
chr8 (19-77)||(13357960-13358018)
chr8 (19-77)||(18374058-18374116)
chr8 (19-77)||(44893282-44893340)
chr8 (19-80)||(3418514-3418575)
chr8 (19-80)||(22212516-22212577)
chr8 (19-80)||(27975939-27976000)
chr8 (19-80)||(28033208-28033269)
chr8 (19-80)||(43027353-43027414)
chr8 (17-73)||(1012985-1013041)
chr8 (17-80)||(16893983-16894044)
chr8 (19-62)||(33401818-33401861)
chr8 (19-77)||(11785963-11786021)
chr8 (19-57)||(33935759-33935797)
chr8 (19-80)||(583860-583921)
chr8 (19-80)||(7673658-7673719)
chr8 (23-80)||(8803106-8803163)
chr8 (19-80)||(14846623-14846684)
[»] chr4 (45 HSPs)
chr4 (19-80)||(7246647-7246708)
chr4 (19-80)||(38168305-38168366)
chr4 (19-80)||(42722578-42722639)
chr4 (19-80)||(40780862-40780923)
chr4 (19-80)||(53599109-53599170)
chr4 (19-80)||(55921083-55921144)
chr4 (17-80)||(47078505-47078568)
chr4 (19-80)||(14567288-14567349)
chr4 (19-80)||(38166076-38166137)
chr4 (19-79)||(1940779-1940839)
chr4 (17-80)||(16450347-16450410)
chr4 (17-80)||(47682383-47682446)
chr4 (19-77)||(3159473-3159531)
chr4 (19-73)||(50485992-50486046)
chr4 (19-80)||(5472849-5472910)
chr4 (19-80)||(6032644-6032705)
chr4 (19-76)||(8889071-8889128)
chr4 (19-80)||(14124065-14124126)
chr4 (19-80)||(16645167-16645228)
chr4 (19-80)||(17080092-17080153)
chr4 (19-80)||(29895836-29895897)
chr4 (19-80)||(31588735-31588796)
chr4 (24-80)||(43468401-43468457)
chr4 (17-80)||(48834701-48834764)
chr4 (22-80)||(49952146-49952205)
chr4 (19-74)||(54946298-54946353)
chr4 (19-77)||(49260669-49260727)
chr4 (19-80)||(2559356-2559417)
chr4 (19-80)||(4738667-4738728)
chr4 (23-80)||(13073591-13073648)
chr4 (20-73)||(30317283-30317336)
chr4 (17-80)||(15732449-15732512)
chr4 (19-70)||(20532420-20532471)
chr4 (17-72)||(36262776-36262831)
chr4 (19-77)||(8064802-8064860)
chr4 (19-49)||(15839967-15839997)
chr4 (19-48)||(1446875-1446904)
chr4 (19-76)||(3574453-3574508)
chr4 (19-80)||(21429350-21429411)
chr4 (19-80)||(24166499-24166560)
chr4 (19-80)||(36145216-36145277)
chr4 (17-46)||(37194857-37194886)
chr4 (19-80)||(38075482-38075543)
chr4 (24-80)||(2686456-2686512)
chr4 (24-80)||(25406564-25406620)
[»] scaffold0009 (1 HSPs)
scaffold0009 (19-80)||(42833-42894)
[»] scaffold0002 (2 HSPs)
scaffold0002 (19-80)||(617-678)
scaffold0002 (23-80)||(319473-319530)
[»] chr1 (46 HSPs)
chr1 (19-80)||(5855567-5855628)
chr1 (19-80)||(10172973-10173034)
chr1 (19-80)||(26660183-26660243)
chr1 (19-80)||(43959823-43959884)
chr1 (19-80)||(45361884-45361945)
chr1 (19-80)||(16956511-16956572)
chr1 (19-80)||(18915912-18915973)
chr1 (19-80)||(26325857-26325918)
chr1 (19-80)||(49078159-49078220)
chr1 (17-80)||(5504074-5504137)
chr1 (19-80)||(4581684-4581745)
chr1 (19-80)||(8764036-8764097)
chr1 (19-80)||(9659181-9659242)
chr1 (19-80)||(10422833-10422894)
chr1 (19-80)||(17642006-17642067)
chr1 (19-80)||(32142848-32142909)
chr1 (19-80)||(34719821-34719882)
chr1 (19-80)||(37339865-37339926)
chr1 (19-80)||(41663858-41663919)
chr1 (20-80)||(11397891-11397951)
chr1 (25-80)||(3850744-3850799)
chr1 (19-77)||(30927732-30927790)
chr1 (19-77)||(50094949-50095007)
chr1 (23-72)||(10507747-10507796)
chr1 (19-80)||(21849207-21849268)
chr1 (19-80)||(32150924-32150985)
chr1 (19-80)||(33004017-33004078)
chr1 (19-80)||(34697380-34697441)
chr1 (19-76)||(35211178-35211235)
chr1 (19-80)||(50503363-50503424)
chr1 (17-73)||(15466008-15466064)
chr1 (24-80)||(45726435-45726491)
chr1 (29-80)||(892304-892355)
chr1 (19-54)||(28324608-28324643)
chr1 (19-77)||(35908803-35908859)
chr1 (29-80)||(51437512-51437563)
chr1 (19-77)||(40288482-40288540)
chr1 (19-80)||(2980933-2980994)
chr1 (19-80)||(6899603-6899664)
chr1 (19-72)||(14254278-14254331)
chr1 (19-80)||(18649354-18649415)
chr1 (19-48)||(33498873-33498902)
chr1 (19-80)||(50371836-50371897)
chr1 (19-55)||(18708567-18708603)
chr1 (19-75)||(25165445-25165501)
chr1 (19-47)||(48798105-48798133)
[»] scaffold0011 (2 HSPs)
scaffold0011 (17-76)||(186562-186621)
scaffold0011 (17-80)||(224362-224425)
[»] scaffold0010 (1 HSPs)
scaffold0010 (19-80)||(155712-155773)
[»] scaffold0005 (1 HSPs)
scaffold0005 (19-80)||(250026-250087)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-79)||(68561-68621)
[»] scaffold0316 (1 HSPs)
scaffold0316 (19-80)||(1615-1676)
[»] scaffold0016 (1 HSPs)
scaffold0016 (21-80)||(8702-8761)
[»] scaffold0376 (1 HSPs)
scaffold0376 (19-80)||(12717-12778)
[»] scaffold0029 (1 HSPs)
scaffold0029 (19-80)||(41091-41152)
[»] scaffold0004 (2 HSPs)
scaffold0004 (19-80)||(7836-7897)
scaffold0004 (19-77)||(94984-95043)
[»] scaffold0223 (1 HSPs)
scaffold0223 (24-80)||(16931-16987)
[»] scaffold0050 (1 HSPs)
scaffold0050 (19-77)||(72802-72860)
[»] scaffold0209 (1 HSPs)
scaffold0209 (19-80)||(12620-12681)
[»] scaffold0170 (1 HSPs)
scaffold0170 (19-72)||(9892-9945)
[»] scaffold0001 (1 HSPs)
scaffold0001 (19-80)||(65153-65214)
[»] scaffold0384 (1 HSPs)
scaffold0384 (17-73)||(6017-6073)


Alignment Details
Target: chr7 (Bit Score: 467; Significance: 0; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 19 - 546
Target Start/End: Original strand, 18785716 - 18786242
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaaggccnnnnnnnntaatattatcattaactaaaaatttg 118  Q
    ||||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
T  18785716 catgcctctacgcatgaactggattagtcgttcacctctggtgggtcggaaaccggtgcgaaggccaaaaaaa-taatattatcattaactaaaaatttg 18785814  T
Q  119 gagaatacaaaattgttattacctttgttatgttttaggaaatgcatattgatggctaagatgttccttatcatctcaatgacattggtttgcataatga 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18785815 gagaatacaaaattgttattacctttgttatgttttaggaaatgcatattgatggctaagatgttccttatcatctcaatgacattggtttgcataatga 18785914  T
Q  219 aattgaaatcttgagcattgagttctaaagctccatttttacatgtttcaatatttgtgagagaagttgtgagccatgtttgtacatcattcggtgaaca 318  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18785915 aattgaaatcttgagcattgagttctaaagctccacttttacatgtttcaatatttgtgagagaagttgtgagccatgtttgtacatcattcggtgaaca 18786014  T
Q  319 atttttgcttgcattgtttaagccttcaagtgtatggttgagatgaaaaattgtgttttcaaatagcttgaaacaatcaccatgaaccgttttatgcgcg 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  18786015 atttttgcttgcattgtttaagccttcaagtgtatggttgagatgaaaaattgtgttttcaaatagcttgaaacaatcagcatgaaccgttttatgcacg 18786114  T
Q  419 gatgagttttgttgttgttgagaattttcttgtgcttctttttgcatggtaagagcttggtttaaggctaatttaacaagcatttccctgaattcaactc 518  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18786115 gatgagttttgttgttgttgagaattatcttgtgcttctttttgcatggtaagagcttggtttaaggctaatttaacaagcatttccctgaattcaactc 18786214  T
Q  519 tatgtttgattttgaagtgattgttcat 546  Q
    ||||||||||||||||||||||||||||    
T  18786215 tatgtttgattttgaagtgattgttcat 18786242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 13095905 - 13095963
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  13095905 catgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgc 13095963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 38578929 - 38578868
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  38578929 catgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 38578868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 27028326 - 27028387
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  27028326 catgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaa 27028387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 48244416 - 48244357
Alignment:
Q  21 tgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||||||| | |||| ||| |||||||||||||    
T  48244416 tgcctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgcgaa 48244357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 22993429 - 22993368
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| || ||||||||||||||||||| | ||||||| ||||||||||||||    
T  22993429 catgcctctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaa 22993368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 48804730 - 48804791
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||  | ||||||||||||||||||||||    
T  48804730 catgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 48804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 5039482 - 5039422
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||| ||||||||||||||||||||||||||||||||| | |||| ||| ||||||||||    
T  5039482 cacatacctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgc 5039422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 14650365 - 14650425
Alignment:
Q  20 atgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||| |||||||||||||| | |||||| | |||||||||||||    
T  14650365 atgcctctacgcatgagccgggttagtcgctcacctttggtgggttgaaaaccggtgcgaa 14650425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 1605986 - 1606049
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| || ||||||||||||||||| ||||| | |||| |||||||||||||||||    
T  1605986 cacatgcctctaggcttgagccggattagtcgcccacctttggtggatcggaaaccggtgcgaa 1606049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 21530793 - 21530856
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||| ||||    
T  21530793 cacatgcctctacgcacgagccgaattaatcgctcacctttggtgggtcggaaaccggttcgaa 21530856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 27875152 - 27875089
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||| || ||||||||  ||||| |||||||||| |||||||||||||    
T  27875152 cacatgcctctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccggtgcgaa 27875089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 38988945 - 38989006
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcga 79  Q
    ||||||||||||||||||| |||||||||||||||| || | ||||||| |||||||||||||    
T  38988945 cacatgcctctacgcatgaaccggattagtcgctcatctttggtgggtc-gaaaccggtgcga 38989006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 45960065 - 45960007
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||| ||||||||||||||||||||| |  ||| ||||||||||||||    
T  45960065 catgcctctacgcataagccggattagtcgctcacctttgatggatcggaaaccggtgc 45960007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 5069877 - 5069816
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||  ||||||||||||||| ||||| | ||||||||||||||| ||||||    
T  5069877 catgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaa 5069816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 8734748 - 8734687
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||| ||||| ||||| |||||||||| ||||| | ||||||||||||||||||||||    
T  8734748 catgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaa 8734687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 39474991 - 39475048
Alignment:
Q  23 cctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||  ||||| |||||||||| ||||| |||||||    
T  39474991 cctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccagtgcgaa 39475048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 43346841 - 43346780
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| | ||||||||||||||||||| || | |||||||||||||| |||||||    
T  43346841 catgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaa 43346780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 43862034 - 43861973
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||  |||||| | |||| ||| |||||||||||||    
T  43862034 catgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaa 43861973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 32768983 - 32769041
Alignment:
Q  18 acatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    ||||||||||||||| ||| ||||||||||| |||||| | |||| |||||||||||||    
T  32768983 acatgcctctacgcacgagtcggattagtcgttcacctttggtggatcggaaaccggtg 32769041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 3603404 - 3603465
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||||||||||| ||| |||| | | |||||||||||| |||||||||    
T  3603404 catgcctctacgcacgagccggattaatcgttcacttttggtgggtcggaaatcggtgcgaa 3603465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 16802171 - 16802228
Alignment:
Q  20 atgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||| |||||||||||||||||||||  | |||||||| |||| |||||    
T  16802171 atgcctctacgcacgagccggattagtcgctcaccattggtgggtcgaaaactggtgc 16802228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 34659273 - 34659334
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||  | ||| |||| |||||||||||||    
T  34659273 catgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaa 34659334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 37514968 - 37515025
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    |||| ||||||||| ||||||||||| ||| |||||  ||||||||||||||||||||    
T  37514968 catgtctctacgcacgagccggattaatcgttcaccattagtgggtcggaaaccggtg 37515025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 41945520 - 41945581
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||  ||||| | ||| |||||||| |||||||||    
T  41945520 catgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaa 41945581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 48551904 - 48551965
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| |||||||||||||||||  ||||| |  ||| |||||||||||||||||    
T  48551904 catgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaa 48551965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 28396222 - 28396166
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggt 75  Q
    ||||||| ||||||||||||||||||||||   |||| | |||||||||||||||||    
T  28396222 catgcctttacgcatgagccggattagtcgtctacctttggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 26423347 - 26423289
Alignment:
Q  21 tgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| ||||| ||||||||| |||||| | || |||||||||||||||||||    
T  26423347 tgcctctacgcacgagccagattagtcgttcacctttggt-ggtcggaaaccggtgcgaa 26423289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 10047935 - 10047877
Alignment:
Q  22 gcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| | ||||||||  ||||  | ||||||||||||||||||||||    
T  10047935 gcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaa 10047877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 24983481 - 24983419
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtc-ggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||  | ||||||| |||||||| ||||||    
T  24983481 catgcctctacgcatgagccggattagtcgtccaccattggtgggtctggaaaccgatgcgaa 24983419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 3353471 - 3353532
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||  ||||| |  ||| || ||||||||||||||    
T  3353471 catgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgcgaa 3353532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 4195264 - 4195203
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||| ||  ||||  | |||||| |||||||| ||||||    
T  4195264 catgcctctacgcatgagccggattagccgtccaccattggtgggttggaaaccgatgcgaa 4195203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 4228818 - 4228781
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacc 54  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  4228818 cacatgcccctacgcatgagccggattagtcgcccacc 4228781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 17748444 - 17748383
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| | |||||||||||||||  ||||| |  |||||||||||||| ||||||    
T  17748444 catgcctctacgtacgagccggattagtcgtccacctttgttgggtcggaaaccgatgcgaa 17748383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 22974014 - 22974075
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| |||||||||||||| |||||||||  ||||| | ||||||| |||||||| |||||    
T  22974014 catgcgtctacgcatgagccagattagtcgtccacctttggtgggtcagaaaccggcgcgaa 22974075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Complemental strand, 36619316 - 36619287
Alignment:
Q  19 catgcctctacgcatgagccggattagtcg 48  Q
    ||||||||||||||||||||||||||||||    
T  36619316 catgcctctacgcatgagccggattagtcg 36619287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 42210324 - 42210263
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||||||||||| || | ||||  | ||||||||||||||| ||||||    
T  42210324 catgcctctacgcacgagccggattaatcacccaccgttggtgggtcggaaaccgatgcgaa 42210263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 47341923 - 47341984
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||| ||||| |||| |||||  | |||||||||||| |||||||||    
T  47341923 catgcctctacgcacgagcaggattggtcgttcaccattggtgggtcggaaatcggtgcgaa 47341984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 10317787 - 10317747
Alignment:
Q  40 gattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| | |||| |||||||||||||||||    
T  10317787 gattagtcgctcacctttggtggatcggaaaccggtgcgaa 10317747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 22268082 - 22268042
Alignment:
Q  40 gattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| | |||| |||||||||||||||||    
T  22268082 gattagtcgctcacctttggtggatcggaaaccggtgcgaa 22268042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 32823291 - 32823351
Alignment:
Q  20 atgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||| ||||||||||||||||  |||  |  |||||||||||| ||||||||    
T  32823291 atgcctctacgcacgagccggattagtcgcagaccattgatgggtcggaaacgggtgcgaa 32823351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 34127698 - 34127646
Alignment:
Q  28 acgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| |||||||||||||||| ||||| | |||||||  |||||||||||||    
T  34127698 acgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtgcgaa 34127646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 39420886 - 39420942
Alignment:
Q  21 tgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||||   |||| |  |||| |||||||||||||    
T  39420886 tgcctctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgc 39420942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 365; Significance: 0; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 130 - 546
Target Start/End: Original strand, 1624885 - 1625301
Alignment:
Q  130 attgttattacctttgttatgttttaggaaatgcatattgatggctaagatgttccttatcatctcaatgacattggtttgcataatgaaattgaaatct 229  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1624885 attgttaatacctttgttatgtttcagaaaatgcatattgatggctaagatgttccttatcatctcaatgacattggtttgcataatgaaattgaaatct 1624984  T
Q  230 tgagcattgagttctaaagctccatttttacatgtttcaatatttgtgagagaagttgtgagccatgtttgtacatcattcggtgaacaatttttgcttg 329  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1624985 tgagcattgagttctaaagctccacttttacatgtttcaatatttgtgagagaagttgtgagccatgtttgtacatcattcggtgaacaatttttgcttg 1625084  T
Q  330 cattgtttaagccttcaagtgtatggttgagatgaaaaattgtgttttcaaatagcttgaaacaatcaccatgaaccgttttatgcgcggatgagttttg 429  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| | |||||||||||    
T  1625085 cattgtttaagccttcaagtgtacggttgagatgaaaaattgtgttttcaactagcttcaaacaatcaccatgaaccgttttatgcaccgatgagttttg 1625184  T
Q  430 ttgttgttgagaattttcttgtgcttctttttgcatggtaagagcttggtttaaggctaatttaacaagcatttccctgaattcaactctatgtttgatt 529  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1625185 ttgttgttgagaattgtcttgtgcttctttttgcatggtaagagcttgttttaaggctaattgaacaagcatttccctgaattcaactctatgtttgatt 1625284  T
Q  530 ttgaagtgattgttcat 546  Q
    ||||| |||||||||||    
T  1625285 ttgaaatgattgttcat 1625301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 130 - 546
Target Start/End: Original strand, 1607878 - 1608294
Alignment:
Q  130 attgttattacctttgttatgttttaggaaatgcatattgatggctaagatgttccttatcatctcaatgacattggtttgcataatgaaattgaaatct 229  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  1607878 attgttagtacctttgctatgtttcaggaaatgcatattgatggctaagatgttccttatcatttcagtgacattggtttgcataatgaaatcgaaatct 1607977  T
Q  230 tgagcattgagttctaaagctccatttttacatgtttcaatatttgtgagagaagttgtgagccatgtttgtacatcattcggtgaacaatttttgcttg 329  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |    
T  1607978 tgagcattgagttctaaagctccacttttacatgtttcaatatttgtgagagaagttgttagccatgtttgtgcatcatttggtgaacaatttttgctag 1608077  T
Q  330 cattgtttaagccttcaagtgtatggttgagatgaaaaattgtgttttcaaatagcttgaaacaatcaccatgaaccgttttatgcgcggatgagttttg 429  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||||||    
T  1608078 cattgtttaagccttcaagtgtacggttgagatgaaaaattgtgttttcaaatagcttcaaacaatcaccatgaaccgttttatgcacaaatgagttttg 1608177  T
Q  430 ttgttgttgagaattttcttgtgcttctttttgcatggtaagagcttggtttaaggctaatttaacaagcatttccctgaattcaactctatgtttgatt 529  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1608178 ttgttgttgagaattttcttgtgcttctttttgcatggtaagagcttgttttaaggctaattgaacaagcatttccctgaattcaactctatgtttgatt 1608277  T
Q  530 ttgaagtgattgttcat 546  Q
    ||||| |||||||||||    
T  1608278 ttgaaatgattgttcat 1608294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 130 - 546
Target Start/End: Original strand, 1631368 - 1631784
Alignment:
Q  130 attgttattacctttgttatgttttaggaaatgcatattgatggctaagatgttccttatcatctcaatgacattggtttgcataatgaaattgaaatct 229  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  1631368 attgttagtacctttgctatgtttcaggaaatgcatattgatggctaagatgttccttatcatttcagtgacattggtttgcataatgaaatcgaaatct 1631467  T
Q  230 tgagcattgagttctaaagctccatttttacatgtttcaatatttgtgagagaagttgtgagccatgtttgtacatcattcggtgaacaatttttgcttg 329  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |    
T  1631468 tgagcattgagttctaaagctccacttttacatgtttcaatatttgtgagagaagttgttagccatgtttgtgcatcatttggtgaacaatttttgctag 1631567  T
Q  330 cattgtttaagccttcaagtgtatggttgagatgaaaaattgtgttttcaaatagcttgaaacaatcaccatgaaccgttttatgcgcggatgagttttg 429  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||||||    
T  1631568 cattgtttaagccttcaagtgtacggttgagatgaaaaattgtgttttcaaatagcttcaaacaatcaccatgaaccgttttatgcaccaatgagttttg 1631667  T
Q  430 ttgttgttgagaattttcttgtgcttctttttgcatggtaagagcttggtttaaggctaatttaacaagcatttccctgaattcaactctatgtttgatt 529  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1631668 ttgttgttgagaatttgcttgtgcttctttttgcatggtaagagcttgttttaaggctaattgaacaagcatttccctgaattcaactctatgtttgatt 1631767  T
Q  530 ttgaagtgattgttcat 546  Q
    ||||| |||||||||||    
T  1631768 ttgaaatgattgttcat 1631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 130 - 546
Target Start/End: Complemental strand, 10819174 - 10818761
Alignment:
Q  130 attgttattacctttgttatgttttaggaaatgcatattgatggctaagatgttccttatcatctcaatgacattggtttgcataatgaaattgaaatct 229  Q
    ||||||| ||||| | ||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10819174 attgttagtacctgttttatgattcaggaaatgcatattgatggctaagatgttccttatcatctcagtgacattggcttgcataatgaaattgaaatct 10819075  T
Q  230 tgagcattgagttctaaagctccatttttacatgtttcaatatttgtgagagaagttgtgagccatgtttgtacatcattcggtgaacaatttttgcttg 329  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  10819074 tgagcattgagttctaaagctccacttttacatgtttcaatatttgtgagagaagttgtgagccatgtttgtgcatcatttggtgaacaatttttacttg 10818975  T
Q  330 cattgtttaagccttcaagtgtatggttgagatgaaaaattgtgttttcaaatagcttgaaacaatcaccatgaaccgttttatgcgcggatgagttttg 429  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  10818974 cattgtttaagccttcaagtgtgcggttgagatgaaaaattgtattttcatatagcttcaaacaatcaccatgaaccgttttatgcaccgatgagttttg 10818875  T
Q  430 ttgttgttgagaattttcttgtgcttctttttgcatggtaagagcttggtttaaggctaatttaacaagcatttccctgaattcaactctatgtttgatt 529  Q
    ||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  10818874 tt---gttgagaattttcatgtgcttctttttgcatggtaagagcttggtttaaggctaattgaacaagcatttccctgaattcaattctatgtttgatt 10818778  T
Q  530 ttgaagtgattgttcat 546  Q
    ||||| |||||||||||    
T  10818777 ttgaaatgattgttcat 10818761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 54261270 - 54261331
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  54261270 catgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaa 54261331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 3507596 - 3507535
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  3507596 catgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaa 3507535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 44064588 - 44064646
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  44064588 catgcctctacgcatgaaccggattagtcgctcacctttggtgggtcggaaaccggtgc 44064646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 28572274 - 28572213
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  28572274 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 28572213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 29127963 - 29128024
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||    
T  29127963 catgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaa 29128024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 42412837 - 42412782
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  42412837 catgcctctacgcatgagccggattagtcgctcacc---agtgggtcggaaaccggtgc 42412782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 45402414 - 45402362
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaac 71  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  45402414 catgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaac 45402362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 55069744 - 55069684
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||||| ||||||||||| |||||||||| | |||||||||||||||||||    
T  55069744 cacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgc 55069684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 45877496 - 45877559
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||||| |||||  |  |||||||||||||||||||||    
T  45877496 cacatgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaa 45877559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 7310766 - 7310705
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||||||||||||||||||| || | ||||||||||||||| ||||||    
T  7310766 catgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaa 7310705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 15320230 - 15320291
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| | ||||||| ||||||||||||||    
T  15320230 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaa 15320291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 26043856 - 26043917
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||| |||||||| |||||    
T  26043856 catgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccggggcgaa 26043917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 47219188 - 47219249
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||| |  |||||||||||||||||||||    
T  47219188 catgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaa 47219249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 49021266 - 49021205
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||  | ||||||||||||||||||||||    
T  49021266 catgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 49021205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 24506713 - 24506653
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||||||||| | |||||||||||||||  | |||||||||||||||||||    
T  24506713 cacatgcctctacgcatgagtcagattagtcgctcaccattggtgggtcggaaaccggtgc 24506653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 36043730 - 36043676
Alignment:
Q  26 ctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  36043730 ctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 36043676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 2668105 - 2668166
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||| ||||| | |||||||    
T  2668105 catgcctctacgcaagagctggattagtcgctcacctttagtgggttggaaatcagtgcgaa 2668166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 3136757 - 3136696
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||| |||||||||||  ||||| | || |||||||||||||||||||    
T  3136757 catgcctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaa 3136696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 7328895 - 7328948
Alignment:
Q  27 tacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||| ||||| | |||||||| |||||||||||||    
T  7328895 tacgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaa 7328948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 26362030 - 26361973
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    |||||||||||||| |||||||||||||||| ||||| |  |||||||||||||||||    
T  26362030 catgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtg 26361973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 30767310 - 30767249
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| | |||||||||||||  |||||||    
T  30767310 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaactagtgcgaa 30767249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 35316000 - 35316061
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||| ||||||||||| ||| | | ||||||||||||||| ||||||    
T  35316000 catgcctctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaa 35316061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 49543563 - 49543624
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||| ||||||||| ||||| ||||||||||||||| ||| ||||    
T  49543563 catgcctctacgcacgagccgaattagtcgcccacctttagtgggtcggaaactggtacgaa 49543624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 54237492 - 54237553
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||| ||||||||||||||||||| |||||  ||||  ||||||||||||||||||||||||    
T  54237492 catgtctctacgcatgagccggataagtcgtccaccattagtgggtcggaaaccggtgcgaa 54237553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 7650276 - 7650332
Alignment:
Q  24 ctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||| |||||||||||||||| ||||| | |||||| |||||||||||||||    
T  7650276 ctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaa 7650332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 26207864 - 26207804
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcga 79  Q
    ||||||||||||||||||||||||||||||  ||    |||||||||||||||||||||||    
T  26207864 catgcctctacgcatgagccggattagtcggccattattagtgggtcggaaaccggtgcga 26207804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 53649776 - 53649832
Alignment:
Q  24 ctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||| |||||| |  ||| |||||||||||||||||    
T  53649776 ctctacgcatgagccggattagtcgttcacctttgatggatcggaaaccggtgcgaa 53649832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 10043724 - 10043787
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| ||| | ||||| |||||||||  | ||||||||||||||||||||||    
T  10043724 cacatgcctctacgcacgaggcagattaatcgctcaccattggtgggtcggaaaccggtgcgaa 10043787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 47164152 - 47164207
Alignment:
Q  21 tgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    |||||||||||| ||||||||||||||||||| || | |||| |||||||||||||    
T  47164152 tgcctctacgcacgagccggattagtcgctcatctttggtggatcggaaaccggtg 47164207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 50405666 - 50405608
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||| ||| |||||||||||| ||||  | |||||||||||||||||||    
T  50405666 catgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgc 50405608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 4638202 - 4638259
Alignment:
Q  23 cctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||| ||||||||||||| || ||||| || |||||||||||||| ||||||    
T  4638202 cctctacgcacgagccggattagtagcccacctttaatgggtcggaaaccgatgcgaa 4638259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 6462456 - 6462517
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||    |||||||| |||||||||||||||    
T  6462456 catgcctctacgcatgagccggattagtcgaccattattagtgggttggaaaccggtgcgaa 6462517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 8362621 - 8362682
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||  ||||||||  ||||| |||||| || ||||||||||||||    
T  8362621 catgcctctacgcatgagccaaattagtcgtccacctttagtggatccgaaaccggtgcgaa 8362682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 13893970 - 13894031
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||| || |||||||||||||||| ||||| | |||| ||| |||||||||||||    
T  13893970 catgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcgaa 13894031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 25295004 - 25295065
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||| |||||||||||||||||||  ||||  | |||||| |||||||||||||||    
T  25295004 catgcctctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaa 25295065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 29762218 - 29762157
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||| |||||||| ||||||||||  ||||  | ||||||||||||||||||||||    
T  29762218 catgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 29762157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 41630575 - 41630518
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    ||||||||||| ||||||||||||||||||| ||||| | || |||||||||| ||||    
T  41630575 catgcctctacacatgagccggattagtcgcccacctttggttggtcggaaactggtg 41630518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 43330795 - 43330734
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| | |||||||  |||||||| ||||    
T  43330795 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtacgaa 43330734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 47471875 - 47471936
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| ||||||||||||||| ||||||||  ||||| | ||||||||||||||| ||||||    
T  47471875 catgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccgatgcgaa 47471936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 47749168 - 47749107
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||| ||||||||| ||||| | || |||||||||||| ||||||    
T  47749168 catgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaa 47749107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 51060344 - 51060283
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||| | ||||||||||  ||||  | ||||||||||||||||||||||    
T  51060344 catgcctctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 51060283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 29195384 - 29195321
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||| ||||| || |||||||||  ||||| |||||||| |||||||||| ||||    
T  29195384 cacatgcctctacacatgaaccagattagtcgtccacctttagtgggttggaaaccggtacgaa 29195321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 35998636 - 35998573
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| |||  |||||| |||  ||||| ||||||||| ||||||||||||||    
T  35998636 cacatgcctctacgcacgagttggattaatcgtccacctttagtgggtcagaaaccggtgcgaa 35998573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 49
Target Start/End: Original strand, 39849115 - 39849145
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgc 49  Q
    |||||||||||||||||||||||||||||||    
T  39849115 catgcctctacgcatgagccggattagtcgc 39849145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 40660390 - 40660332
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||| |||||||| ||  |||||| | |||||||| ||||||||||    
T  40660390 catgcctctacgcatgaaccggattaatcattcacctttggtgggtcgaaaaccggtgc 40660332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 40944927 - 40944972
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtc 65  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||    
T  40944927 catgcctctacgcatgagc-ggattagtcgctcacctttggtgggtc 40944972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 50753404 - 50753346
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||| ||| ||||||||||| ||| |  | |||||||||||||||||||    
T  50753404 catgcctctacgcacgagtcggattagtcgttcatcattggtgggtcggaaaccggtgc 50753346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 2029330 - 2029269
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||| ||||||||||| ||||  |  ||||||| ||||| |||||||    
T  2029330 catgcctctacgcatgagctggattagtcgcccaccattgatgggtcgcaaaccagtgcgaa 2029269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 19147009 - 19147066
Alignment:
Q  23 cctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||| ||| |||| ||||||||||  ||||| | ||||||||||||||||||||||    
T  19147009 cctctatgcacgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 19147066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 23511611 - 23511672
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||| ||||||| |||  ||||| |  ||||||| |||||||||||||    
T  23511611 catgcctctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgcgaa 23511672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 29135957 - 29136018
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||   ||||  | |||||| |||||||||| ||||    
T  29135957 catgcctctacgcatgagccggattagtcttccaccattggtgggttggaaaccggtacgaa 29136018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 33251706 - 33251735
Alignment:
Q  19 catgcctctacgcatgagccggattagtcg 48  Q
    ||||||||||||||||||||||||||||||    
T  33251706 catgcctctacgcatgagccggattagtcg 33251735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 49198395 - 49198424
Alignment:
Q  19 catgcctctacgcatgagccggattagtcg 48  Q
    ||||||||||||||||||||||||||||||    
T  49198395 catgcctctacgcatgagccggattagtcg 49198424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 51683017 - 51682956
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||| | || |||||||||||||||| ||||  | |||||||||||||| |||||||    
T  51683017 catgcctctccacacgagccggattagtcgcccaccaatggtgggtcggaaaccagtgcgaa 51682956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 6902 - 6963
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  6902 catgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaa 6963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 9e-22; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 21898696 - 21898757
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21898696 catgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaa 21898757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 5253285 - 5253224
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||||||||    
T  5253285 catgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaa 5253224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 9633687 - 9633626
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  9633687 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 9633626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 14107422 - 14107359
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||||| ||    ||||||||||||||||||||||||    
T  14107422 cacatgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaa 14107359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 14326044 - 14326103
Alignment:
Q  18 acatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||||||| ||||||    
T  14326044 acatgcctctacgcatgagccggattagtcgctcatctttggtgggtcggaaaacggtgc 14326103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 14419054 - 14419113
Alignment:
Q  18 acatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||||||| ||||||    
T  14419054 acatgcctctacgcatgagccggattagtcgctcatctttggtgggtcggaaaacggtgc 14419113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 6606160 - 6606098
Alignment:
Q  18 acatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||||  ||||  | ||||||||||||||||||||||    
T  6606160 acatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 6606098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 14783482 - 14783421
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||  | ||||||||||||||||||||||    
T  14783482 catgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 14783421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 30788915 - 30788854
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||| ||| |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  30788915 catgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 30788854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 8612036 - 8611975
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| ||||||||||| ||||||||||||| ||||| | ||||||| ||||||||||||||    
T  8612036 catgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaa 8611975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 8932709 - 8932770
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||| || | ||||| |  |||||||||||||||||||||    
T  8932709 catgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaa 8932770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 8944175 - 8944236
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||| || | ||||| |  |||||||||||||||||||||    
T  8944175 catgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaa 8944236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 19089546 - 19089607
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||   |||| | ||||||||||||||||||||||    
T  19089546 catgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaa 19089607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 30410493 - 30410554
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||| |||||| ||||||| || | ||||||||||||||| ||||||    
T  30410493 catgcctctacgcatgagctggattaatcgctcatctttggtgggtcggaaaccgatgcgaa 30410554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 8149861 - 8149798
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||| ||||| ||||||||  ||||| | |||||| |||||||||||||||    
T  8149861 cacatgcctctacgcattagccgaattagtcgtccacctttggtgggttggaaaccggtgcgaa 8149798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 13468979 - 13469042
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| ||||| |||||||||| ||||  | |||||| |||||||||||||||    
T  13468979 cacatgcctctacgcacgagccagattagtcgcccaccattggtgggttggaaaccggtgcgaa 13469042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 17114960 - 17114901
Alignment:
Q  18 acatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||||||||||||||||||||| ||||| |  | ||||||||| ||||||    
T  17114960 acatgcctctacgcatgagccggattagtcgcccacctttgataggtcggaaatcggtgc 17114901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 15643890 - 15643840
Alignment:
Q  25 tctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggt 75  Q
    |||||||||||| |||||||||||| ||||| |||||||||| ||||||||    
T  15643890 tctacgcatgagtcggattagtcgcccacctttagtgggtcgaaaaccggt 15643840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 3601132 - 3601193
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||| ||| || |||||||||||||||  ||||| | ||||||||||||||||||||||    
T  3601132 catgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 3601193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 12606478 - 12606539
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| | ||| |  |||||||||||||||    
T  12606478 catgcctctacgcacgagccggattagtcgcccacctttggtgagctggaaaccggtgcgaa 12606539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 12635862 - 12635923
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||  ||||||||||||||| |||   | ||||||||||||||||||||||    
T  12635862 catgcctctacgcacaagccggattagtcgcccactattggtgggtcggaaaccggtgcgaa 12635923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 13036066 - 13036005
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||| |||||||||  |||   | ||||||||||||||||||||||    
T  13036066 catgcctctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaa 13036005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 31129225 - 31129286
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||| ||||||| |  ||||| | ||| ||||||||||||||||||    
T  31129225 catgcctctacgcatgagccagattagttgtgcacctttggtgagtcggaaaccggtgcgaa 31129286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 8938765 - 8938820
Alignment:
Q  25 tctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||| ||||||||  ||||| |  |||||||||||||||||||||    
T  8938765 tctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaa 8938820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 13391334 - 13391392
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||| |||||||||||||||| ||  | || ||||||| ||||||||||    
T  13391334 catgcctctacgcacgagccggattagtcgcccatatttaatgggtcgaaaaccggtgc 13391392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 5029865 - 5029926
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||  ||||||||||| || || |  |||||||||||| ||||||||    
T  5029865 catgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaa 5029926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 29333201 - 29333140
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||| || |||||  ||||| | || |||||| ||||||||||||    
T  29333201 catgcctctacgcatgagccgaatcagtcgtccacctttggtaggtcggtaaccggtgcgaa 29333140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 29444827 - 29444766
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||| |  || || | |||||||||||||  |||||||    
T  29444827 catgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcgaa 29444766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 4596181 - 4596233
Alignment:
Q  31 catgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaaggc 83  Q
    ||||||||||||||||||  ||||  |||||||| ||||||| ||||||||||    
T  4596181 catgagccggattagtcgtccaccattagtgggttggaaaccagtgcgaaggc 4596233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 9e-22; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 7747318 - 7747379
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  7747318 catgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaa 7747379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 41220679 - 41220740
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  41220679 catgcctctacgcatgagccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaa 41220740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 10823104 - 10823165
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  10823104 catgcctctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgcgaa 10823165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 12455354 - 12455415
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||||||||  | ||||||||||||||||||||||    
T  12455354 catgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaa 12455415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 39201570 - 39201513
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  39201570 catgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 44945637 - 44945698
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||||||    
T  44945637 catgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaa 44945698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 9360810 - 9360749
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||| ||||||||| ||||| ||||||| ||||||||||||||||    
T  9360810 catgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaa 9360749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 25540466 - 25540405
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||  ||||| | ||||||||||||||||||||||    
T  25540466 catgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 25540405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 33005795 - 33005856
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||| | ||||| |||||||||| ||||||||||||||||| ||||||    
T  33005795 catgcctctacgcatgaggcagattaatcgctcacctttagtgggtcggaaaccgatgcgaa 33005856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 34346349 - 34346288
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||| | ||||| |||||||||| | ||||||||||||||||||||||    
T  34346349 catgcctctacgcatgagtcagattaatcgctcacctttggtgggtcggaaaccggtgcgaa 34346288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 44139530 - 44139589
Alignment:
Q  21 tgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| |||||||||||||||| ||||  | ||||||||||||||||||||||    
T  44139530 tgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaa 44139589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 2528403 - 2528342
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||| ||| |||||||||||||||||| || ||||| ||||||||| ||||||||    
T  2528403 catgcctctacacataagccggattagtcgctcatctttagtgagtcggaaactggtgcgaa 2528342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 3811753 - 3811692
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||| |||| ||||| | ||||||| ||||||| ||||||    
T  3811753 catgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaa 3811692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 8410175 - 8410236
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||| | | | ||||||||||||||||||||    
T  8410175 catgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaa 8410236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 16325639 - 16325700
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||| |||||||||  ||||  | ||||||||||||||||||||||    
T  16325639 catgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaa 16325700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 18649088 - 18649027
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||| |||||||||||||||| | | |||||| |||||||| ||||||    
T  18649088 catgcctctacgcatgagtcggattagtcgctcacttttggtgggttggaaaccgttgcgaa 18649027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 20116674 - 20116613
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||| ||  ||||| |  |||||||||||||||||||||    
T  20116674 catgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaa 20116613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 22593178 - 22593238
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||| | ||||||||| ||||||||||||    
T  22593178 catgcctctacgcatgagccggattagtcgtccacctttggtgggtcgg-aaccggtgcgaa 22593238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 28616441 - 28616380
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||||| |||||||||| || || ||||||||| ||||||||||||||    
T  28616441 catgcctctacgcacgagccagattagtcgcccatctttagtgggtcagaaaccggtgcgaa 28616380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 38005446 - 38005507
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||| ||||||||||||||||||| ||||| | |||| |||||||| ||||||||    
T  38005446 catgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaa 38005507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 41031968 - 41031907
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||| | ||||| | |||||||||||||| |||||||    
T  41031968 catgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaa 41031907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 44773307 - 44773368
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||  || ||||||||||||||||||||||| |  |||||||||||||||||||||    
T  44773307 catgcctctgtgcgtgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaa 44773368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10026678 - 10026626
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaac 71  Q
    ||||||||||||||||||||||||||||||  ||||| | |||||||||||||    
T  10026678 catgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10046539 - 10046487
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaac 71  Q
    ||||||||||||||||||||||||||||||  ||||| | |||||||||||||    
T  10046539 catgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 18902587 - 18902531
Alignment:
Q  24 ctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||| ||||| |||||||||| ||||| | ||||||||||||||||||||||    
T  18902587 ctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaa 18902531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 331545 - 331598
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaacc 72  Q
    ||||| ||||||||||||||||||||||||| ||||| | |||||| |||||||    
T  331545 catgcttctacgcatgagccggattagtcgcccacctttggtgggttggaaacc 331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 2550912 - 2550973
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||| |||||||||||||||||||||||||| ||| | | |||||| | |||||||||||||    
T  2550912 catgtctctacgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgcgaa 2550973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 3643949 - 3643888
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||| ||||||||||  ||||| | ||||| ||||||||| ||||||    
T  3643949 catgcctctacgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaa 3643888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 6358213 - 6358156
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    ||||||||||||||||||||||||||||||  ||||  | |||||||| |||||||||    
T  6358213 catgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtg 6358156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 12864268 - 12864329
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||| |||||||||| |||||||||  ||||  | ||||||||||||||||||||||    
T  12864268 catgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaa 12864329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 14169671 - 14169610
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||| |||||||||||||||||||||||||   |||  | ||||||||||||||||||||||    
T  14169671 catgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaa 14169610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 21641994 - 21642055
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||| |||| |||| | ||| | |||||||| |||||||||||||    
T  21641994 catgcctctacgcatgagccgaattaatcgcccgcctttggtgggtcgaaaaccggtgcgaa 21642055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 27725984 - 27726041
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    ||||||||||||||  ||||||||||||||| ||||  | ||||||||||||||||||    
T  27725984 catgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccggtg 27726041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 35946782 - 35946843
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||  ||||  | ||||||||||||| ||||||||    
T  35946782 catgcctctacgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgcgaa 35946843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 38962807 - 38962868
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||| ||||||||||||  ||||| | ||||||| ||||| ||||||||    
T  38962807 catgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaa 38962868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 792208 - 792256
Alignment:
Q  29 cgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||| || || | |||||||||||||||||||    
T  792208 cgcatgagccggattagtcgcccatctttggtgggtcggaaaccggtgc 792256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 26805338 - 26805394
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccg 73  Q
    |||||||||||||||||||| |||||||||||| ||||| | |||| ||| ||||||    
T  26805338 cacatgcctctacgcatgagtcggattagtcgcccacctttggtggctcgaaaaccg 26805394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 48
Target Start/End: Original strand, 24179610 - 24179641
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcg 48  Q
    ||||||||||||||||||||||||||||||||    
T  24179610 cacatgcctctacgcatgagccggattagtcg 24179641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 34722722 - 34722785
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||| ||||||||| |||||||||||||||| ||||| |  ||| || ||||||||||||||    
T  34722722 cacatgtctctacgcacgagccggattagtcgcccacctttgatggatcagaaaccggtgcgaa 34722785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 7787100 - 7787158
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||| |||||||||||||||| || || | |||| ||| ||||||||||    
T  7787100 catgcctctacgcacgagccggattagtcgcccatctttggtggatcgaaaaccggtgc 7787158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 10669636 - 10669694
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||| ||||||||| ||| ||||||| ||| |||||| | |||||||||||||||||||    
T  10669636 catgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggtgc 10669694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 20612597 - 20612535
Alignment:
Q  19 catgcctctacgcatgagccgg-attagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||| ||||||||||| ||||||||  ||||  | ||||||||||||||||||||||    
T  20612597 catgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 20612535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 21180378 - 21180344
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctc 51  Q
    |||||||||||||||| ||||||||||||||||||    
T  21180378 cacatgcctctacgcacgagccggattagtcgctc 21180344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 41187893 - 41187947
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccg 73  Q
    |||||||||||||||||| ||||||||||||||| |  || ||| ||||||||||    
T  41187893 catgcctctacgcatgagacggattagtcgctcatccataatggatcggaaaccg 41187947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 16034981 - 16035042
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||| |||| | |||||||||||||||||||||  |  || ||||||||||||||||||    
T  16034981 catgcctatacgtacgagccggattagtcgctcaccattgatgagtcggaaaccggtgcgaa 16035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 28525517 - 28525460
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    |||||||||||||| ||||||||||||||   ||||| || |||||||||||| ||||    
T  28525517 catgcctctacgcacgagccggattagtcatccacctttaatgggtcggaaactggtg 28525460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 13026473 - 13026445
Alignment:
Q  19 catgcctctacgcatgagccggattagtc 47  Q
    |||||||||||||||||||||||||||||    
T  13026473 catgcctctacgcatgagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 28857194 - 28857252
Alignment:
Q  22 gcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  28857194 gcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaa 28857252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 39099843 - 39099783
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  39099843 cacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 39099783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 5731982 - 5731921
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  5731982 catgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaa 5731921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 14728128 - 14728189
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||| |||||||| |  |||||||||||||||||||||    
T  14728128 catgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgcgaa 14728189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 28857002 - 28857055
Alignment:
Q  27 tacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  28857002 tacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaa 28857055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 42086372 - 42086433
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||||||||    
T  42086372 catgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 42086433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 9805049 - 9805110
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||| | ||||||||||||| ||||||||    
T  9805049 catgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaa 9805110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 8513562 - 8513625
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| ||||| |||||||||  ||||| | ||||||||||||||||||||||    
T  8513562 cacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaa 8513625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 7308428 - 7308390
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacct 55  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7308428 cacatgcctctacgcatgagccggattagtcgctcacct 7308390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 1538476 - 1538537
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||| |||  ||||  | ||||||||||||||||||||||    
T  1538476 catgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaa 1538537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 2485241 - 2485302
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| ||||| |||||||||||||||||| |  |||||||||||||| ||||||    
T  2485241 catgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaa 2485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 9812917 - 9812978
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| ||||||||||| ||||||||||||| ||||| | ||||||| ||||||||||||||    
T  9812917 catgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaa 9812978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 12705059 - 12705120
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| ||||||||||| ||||||||||||| ||||| | ||||||| ||||||||||||||    
T  12705059 catgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaa 12705120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 12766176 - 12766237
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||| || |||||||||| ||||| | ||||||| ||||||||||||||    
T  12766176 catgcctctacgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgcgaa 12766237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 13664305 - 13664366
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||| ||||| ||| |||||| | ||| ||||||||||||||||||    
T  13664305 catgcctctacgcatgagccagattaatcgatcacctttggtgtgtcggaaaccggtgcgaa 13664366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 19572769 - 19572830
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||| |||||  | |||||| ||||||| |||||||    
T  19572769 catgcctctacgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcgaa 19572830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 20525883 - 20525944
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||  | |||| |||||||||||||||||    
T  20525883 catgcctctacgcatgagccggattagtcgtccaccattggtggatcggaaaccggtgcgaa 20525944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 20682679 - 20682618
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||||||||||| |||  ||||| |||||||| |||||||||||||||    
T  20682679 catgcctctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaa 20682618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 37263285 - 37263346
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||  ||||| || ||| |||||||||||||||||    
T  37263285 catgcctctacgcacgagccggattagtcgtccacctttattggatcggaaaccggtgcgaa 37263346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 40117460 - 40117521
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||| ||| |||||| | |||| ||| |||||||||||||    
T  40117460 catgcctctacgcatgagccggattaatcgttcacctttggtggatcgaaaaccggtgcgaa 40117521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 23383704 - 23383763
Alignment:
Q  21 tgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||| ||||||||||  ||||| | ||||||||||||| ||||||||    
T  23383704 tgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaa 23383763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 41163524 - 41163461
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||| |||||||||||||| ||||||||||  ||||| | ||||||||||||| ||||||||    
T  41163524 cacatgtctctacgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgcgaa 41163461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 42291569 - 42291506
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| |||||||||||||||  ||||| |  ||| |||||||||||||||||    
T  42291569 cacatgcctctacgcacgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaa 42291506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 9168311 - 9168257
Alignment:
Q  23 cctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||  ||||| |||||||||| ||| ||||||    
T  9168311 cctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaatcggtgc 9168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 24463948 - 24463890
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||| ||| |||||||||||||||| ||||| || ||||||| ||||||||||    
T  24463948 catgcctctatgcacgagccggattagtcgcccacctttactgggtcgaaaaccggtgc 24463890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 4016317 - 4016256
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||| || ||||||||||||| |||||||  | |||||||||||||| |||||||    
T  4016317 catgcctctacacacgagccggattagttgctcaccattggtgggtcggaaaccagtgcgaa 4016256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 14588679 - 14588618
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||| | ||| | || |||||||||||||    
T  14588679 catgcctctacgcatgagccggattagtcgtccacctttggtgagccgaaaaccggtgcgaa 14588618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 20255414 - 20255475
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||| |||||||||||  ||||| | ||| ||||||||| ||||||||    
T  20255414 catgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaa 20255475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 38897781 - 38897720
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||||||||||||| || ||||| | |||| ||||||||| |||||||    
T  38897781 catgcctctacgcacgagccggattagttgcccacctttggtggatcggaaaccagtgcgaa 38897720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 42861280 - 42861219
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||| |||  ||||  | |||||||||| |||||||||||    
T  42861280 catgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaa 42861219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 13887510 - 13887561
Alignment:
Q  29 cgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||| |||||||||||||||| ||||| || |||||||||| ||||||||||    
T  13887510 cgcacgagccggattagtcgcccacctttaatgggtcggaacccggtgcgaa 13887561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 48
Target Start/End: Complemental strand, 14974388 - 14974357
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcg 48  Q
    ||||||||||||||||||||||||||||||||    
T  14974388 cacatgcctctacgcatgagccggattagtcg 14974357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 28862868 - 28862931
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| || | | |||||| |||||||  |||| |||||||||||||||||||    
T  28862868 cacatgcctctacgcacgacctgaattagttgctcaccattagtaggtcggaaaccggtgcgaa 28862931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 21487674 - 21487720
Alignment:
Q  34 gagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| ||||| || ||||||| |||||||||||||    
T  21487674 gagccggattagtcgcccacctttaatgggtcgaaaaccggtgcgaa 21487720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 25452970 - 25453027
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||| |||||||||||||||| || || |||| ||||| ||||||||||    
T  25452970 catgcctctacgcacgagccggattagtcgc-caactttagtcggtcgaaaaccggtgc 25453027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 5079376 - 5079436
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| |||||||| |||||||||||||||| ||||| | || ||||| |||||||||||||    
T  5079376 catgcttctacgcacgagccggattagtcgcccacctttggt-ggtcgaaaaccggtgcgaa 5079436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 7866626 - 7866687
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| || ||||||||||||| ||||| | ||||||  |||||| |||||||    
T  7866626 catgcctctacgcacgaaccggattagtcgcccacctttggtgggttagaaaccagtgcgaa 7866687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 27648487 - 27648426
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| |||||||||||||||||  || || | |||| |||||||||| ||||||    
T  27648487 catgcctctacgtatgagccggattagtcgtccatctttggtggatcggaaaccgatgcgaa 27648426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 30995166 - 30995199
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctca 52  Q
    |||||||||||||| |||||||||||||||||||    
T  30995166 catgcctctacgcacgagccggattagtcgctca 30995199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 43399173 - 43399234
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||| ||||||||||  ||| | | || |||||||||||||||||||    
T  43399173 catgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaa 43399234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 10927654 - 10927715
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  10927654 catgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccgatgcgaa 10927715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 45521216 - 45521277
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  45521216 catgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaa 45521277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 15884618 - 15884557
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  15884618 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 15884557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 4479358 - 4479297
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||| ||||||||||  ||||| | ||||||||||||||||||||||    
T  4479358 catgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 4479297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 6100520 - 6100581
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  6100520 catgccactacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccgctgcgaa 6100581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 16291267 - 16291208
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    |||||||||||| |||||||| ||||||||||||||||| | |||||||| |||||||||    
T  16291267 cacatgcctctatgcatgagctggattagtcgctcacctttggtgggtcgaaaaccggtg 16291208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 2964124 - 2964185
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| || ||||||||||||| ||||| | ||||||| ||||||||||||||    
T  2964124 catgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaa 2964185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 8997606 - 8997545
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||| |||||||||||| ||||||||| ||| || | ||||||||||||||||||||||    
T  8997606 catgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaa 8997545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 11298329 - 11298268
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||| |||||||||  |||| |||||||||| | ||||||||||||||||||||||    
T  11298329 catgcctctatgcatgagccaaattaatcgctcacctttggtgggtcggaaaccggtgcgaa 11298268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 43032949 - 43033010
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||| || |||||||||||||||| ||||| | ||||||| ||||||||||||||    
T  43032949 catgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaa 43033010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 13358018 - 13357960
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||| ||| |||||||||||||||  | ||| |||||||||||||||||||||    
T  13358018 catgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaaccggtgc 13357960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 18374058 - 18374116
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||||||  || || | |||||||| ||||||||||    
T  18374058 catgcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtgc 18374116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 44893340 - 44893282
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||| ||||||||||| |||||||||  |  ||||||||||||||||||    
T  44893340 catgcctctacgcacgagccggattaatcgctcacccttgatgggtcggaaaccggtgc 44893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 3418575 - 3418514
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| |||||||||||| | |||||||||  ||||| ||||||||| ||||||||||||||    
T  3418575 catgcgtctacgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtgcgaa 3418514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 22212577 - 22212516
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| |||||||| | |||||||||||||||||||| | |||| ||| |||||||||||||    
T  22212577 catgcttctacgcacgggccggattagtcgctcacctttggtggttcgaaaaccggtgcgaa 22212516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 27975939 - 27976000
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||| |||||||||||| |||| ||||| ||||||||| | ||||| ||||||    
T  27975939 catgcctctacgcttgagccggattaatcgcccacctttagtgggtcaggaaccgatgcgaa 27976000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 28033208 - 28033269
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||| |||||||||||| |||| ||||| ||||||||| | ||||| ||||||    
T  28033208 catgcctctacgcttgagccggattaatcgcccacctttagtgggtcaggaaccgatgcgaa 28033269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 43027353 - 43027414
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  || || |  |||||||||||||| ||||||    
T  43027353 catgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaa 43027414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 1013041 - 1012985
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccg 73  Q
    ||||||||||||||||||||||| |||| ||| |||||| |||||| ||| ||||||    
T  1013041 cacatgcctctacgcatgagccgaattaatcgttcacctttagtggatcgaaaaccg 1012985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 16893983 - 16894044
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||| ||||||||||||||||| ||||| ||||| | || |||||||||||||||||||    
T  16893983 cacatgcctttacgcatgagccggatt-gtcgcccacctttggt-ggtcggaaaccggtgcgaa 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 33401861 - 33401818
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgg 62  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||    
T  33401861 catgcctctacgcatgagtcggattagtcgcccacctttagtgg 33401818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 11785963 - 11786021
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||||||||| ||||| ||||||| || |  ||| ||||||||||||||    
T  11785963 catgcctctacgcatgagccagattaatcgctcatctttgatggatcggaaaccggtgc 11786021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 33935797 - 33935759
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctct 57  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  33935797 catgcctatacgcatgagtcggattagtcgctcacctct 33935759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 583860 - 583921
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||| |||||||||||| ||||| |  ||| |  ||||||||||||||    
T  583860 catgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaa 583921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 7673719 - 7673658
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||||||||||  |||| || || |||||| ||| |||||||||||||    
T  7673719 catgcctctacgcacgagccggatttttcgcccatctttagtggatcgaaaaccggtgcgaa 7673658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 8803106 - 8803163
Alignment:
Q  23 cctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||| |||||||||||||||| || |  | ||||||||||||||| ||||||    
T  8803106 cctctacgcacgagccggattagtcgcccatcaatggtgggtcggaaaccgatgcgaa 8803163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 14846623 - 14846684
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||| | ||| |||||  ||||| | |||||||||||| |||||||||    
T  14846623 catgcctctacgcatgagtcagataagtcgtccacctttggtgggtcggaaatcggtgcgaa 14846684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 7246708 - 7246647
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  7246708 catgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 7246647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 38168305 - 38168366
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  38168305 catgcctctacgcatgagccggattagtcgttcacctttagtgggttggaaaccggtgcgaa 38168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 42722639 - 42722578
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  42722639 catgcctctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccggtgcgaa 42722578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 40780923 - 40780862
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||||||||    
T  40780923 catgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 40780862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 53599109 - 53599170
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||    
T  53599109 catgcctctacgcatgagccggattaatcgttcacctttagtggatcggaaaccggtgcgaa 53599170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 55921083 - 55921144
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| ||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  55921083 catgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaa 55921144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 47078505 - 47078568
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| |||||||||||||||||||||  | |||||||||||||| |||||||    
T  47078505 cacatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaa 47078568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 14567288 - 14567349
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||||| ||| | |||||||||||| |||||||||    
T  14567288 catgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaa 14567349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 38166076 - 38166137
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||| ||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  38166076 catggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 38166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 1940839 - 1940779
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcga 79  Q
    |||||||||||||| |||||||||||||||| ||||| | |||||||| ||||||||||||    
T  1940839 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 16450347 - 16450410
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||| |||||||||  ||||| | || |||||||||||||||||||    
T  16450347 cacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaa 16450410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 47682446 - 47682383
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||| ||||||||| ||||||| |||||||| ||||| | ||||||||||||||||||||||    
T  47682446 cacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaa 47682383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 3159531 - 3159473
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||| ||||| |||||||||||||||  | |||||||||||||||||||    
T  3159531 catgcctctacgcacgagccagattagtcgctcaccattggtgggtcggaaaccggtgc 3159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 50485992 - 50486046
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccg 73  Q
    |||||||||||||| |||||||||||||||| ||||  |||||||||||||||||    
T  50485992 catgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaaccg 50486046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 5472910 - 5472849
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| | |||||||| |||| ||||||||    
T  5472910 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgcgaa 5472849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 6032705 - 6032644
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| |||||||||||||||||   |||| | ||||||||||||||||||||||    
T  6032705 catgcctctacgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaa 6032644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 8889071 - 8889128
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    |||| |||||||||||||||||||||||||  ||||| | ||||||||||||||||||    
T  8889071 catggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 14124065 - 14124126
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||| || |||||||||||||||||||||  | |||||| |||||||||||||||    
T  14124065 catgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaa 14124126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 16645167 - 16645228
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||| |||||| | |||||||||| ||||| | ||||||||||||||||||||||    
T  16645167 catgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaaccggtgcgaa 16645228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 17080092 - 17080153
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||| ||||| |  ||| ||| |||||||||||||    
T  17080092 catgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaa 17080153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 29895836 - 29895897
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||  | |||| |||||||||||||||||    
T  29895836 catgcctctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaa 29895897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 31588735 - 31588796
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||| |||||||||||||||||||||||||||||| | | |||| |||||||||| ||||||    
T  31588735 catgtctctacgcatgagccggattagtcgctcacttttggtggatcggaaaccgatgcgaa 31588796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 43468401 - 43468457
Alignment:
Q  24 ctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||| ||||  | |||||||||| |||||||||||    
T  43468401 ctctacgcatgagccggattagtcgcccaccagtggtgggtcggagaccggtgcgaa 43468457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 48834764 - 48834701
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||  |||||| ||||||||||||  |||| | ||||||||||||||||||||||    
T  48834764 cacatgcctctatacatgagtcggattagtcgcctacctttggtgggtcggaaaccggtgcgaa 48834701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 49952205 - 49952146
Alignment:
Q  22 gcctctacgcatgagccggattagtcgc-tcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||| |||||| |  ||||| |||||||||||||||    
T  49952205 gcctctacgcatgagccggattagtcgcgtcacctttgatgggttggaaaccggtgcgaa 49952146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 54946298 - 54946353
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccgg 74  Q
    ||||||||||||||||||||||||||||||| || |  | ||||||||||||||||    
T  54946298 catgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccgg 54946353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 49260727 - 49260669
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||||||||| |||||||||||||||  ||||| | |||||||||||| ||||||    
T  49260727 catgcctctacgcacgagccggattagtcgaccacctttggtgggtcggaaatcggtgc 49260669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 2559356 - 2559417
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||  |||||||||| |||  ||||| | ||||||||||||||||||||||    
T  2559356 catgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaa 2559417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 4738667 - 4738728
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||| |||||||||||||| | ||||||||  ||||| | ||||||||||||||||||||||    
T  4738667 catgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaa 4738728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 13073591 - 13073648
Alignment:
Q  23 cctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||| || ||||||||| | |||| | ||||||||||||||||||||||    
T  13073591 cctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaa 13073648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 30317283 - 30317336
Alignment:
Q  20 atgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccg 73  Q
    ||||||||||||| |||||| ||||||||| ||||| | |||||||||||||||    
T  30317283 atgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaaccg 30317336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 15732512 - 15732449
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||| | ||  ||||||||||||| || | |||| |||||||||||||||||    
T  15732512 cacatgcctctacgcacgggctagattagtcgctcatctttggtggatcggaaaccggtgcgaa 15732449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 20532471 - 20532420
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaa 70  Q
    |||||||||||||||||||||||| |||||| ||||| | |||| |||||||    
T  20532471 catgcctctacgcatgagccggataagtcgcccacctttggtggatcggaaa 20532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 36262831 - 36262776
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaacc 72  Q
    |||||||||||||||| ||| |||||||||||| ||||| | ||||||| ||||||    
T  36262831 cacatgcctctacgcacgagtcggattagtcgcccacctttggtgggtcagaaacc 36262776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 8064860 - 8064802
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||||||  ||||  || | ||||| ||||||||||    
T  8064860 catgcctctacgcatgagccggattagtcgtccaccattaataggtcgaaaaccggtgc 8064802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 15839997 - 15839967
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgc 49  Q
    |||||||||||||||||||||||||||||||    
T  15839997 catgcctctacgcatgagccggattagtcgc 15839967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 1446875 - 1446904
Alignment:
Q  19 catgcctctacgcatgagccggattagtcg 48  Q
    ||||||||||||||||||||||||||||||    
T  1446875 catgcctctacgcatgagccggattagtcg 1446904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 3574508 - 3574453
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    |||||||||||||| ||| |||||||||||||||||| ||| | ||||||||||||||    
T  3574508 catgcctctacgcacgagtcggattagtcgctcacct-tag-gtgtcggaaaccggtg 3574453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 21429350 - 21429411
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||| | || ||||||  ||||| | ||||||||||||||||||||||    
T  21429350 catgcctctacgcacgagtcagactagtcgtccacctttggtgggtcggaaaccggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 24166499 - 24166560
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||||| |||||||| | ||||| |  ||| |||||||||||||||||    
T  24166499 catgcctctacgcacgagccagattagtcacccacctttgatggatcggaaaccggtgcgaa 24166560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 36145277 - 36145216
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||| ||||||||||||||||||  ||||| |  ||  |||||||||||||||||    
T  36145277 catgcctctacacatgagccggattagtcgtccacctttgatgaatcggaaaccggtgcgaa 36145216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 37194857 - 37194886
Alignment:
Q  17 cacatgcctctacgcatgagccggattagt 46  Q
    ||||||||||||||||||||||||||||||    
T  37194857 cacatgcctctacgcatgagccggattagt 37194886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 38075482 - 38075543
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||| |||| | |  ||||| | ||||||||||||||| ||||||    
T  38075482 catgcctctacgcatgagccgaattaattgtccacctttggtgggtcggaaaccgatgcgaa 38075543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 2686512 - 2686456
Alignment:
Q  24 ctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||| ||||||||| ||||||||  ||||| | |||||| |||||||||||||||    
T  2686512 ctctacacatgagccgaattagtcgtccaccttttgtgggttggaaaccggtgcgaa 2686456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 25406620 - 25406564
Alignment:
Q  24 ctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||  | ||||||||| |||||| |  |||||||||||||||||||||    
T  25406620 ctctacgcatgaatcagattagtcgttcacctttgatgggtcggaaaccggtgcgaa 25406564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 42894 - 42833
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  42894 catgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 42833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 617 - 678
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| ||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  617 catgcctctacgtatgagccagattagtcgctcacctttggtgggtcggaaaccggtgcgaa 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 319473 - 319530
Alignment:
Q  23 cctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||| |||||||| ||||||||||  ||||| | ||||| ||||||||||||||||    
T  319473 cctctatgcatgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaa 319530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 5855567 - 5855628
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| ||||||    
T  5855567 catgcctctacgcatgaggcggattagtcgttcacctttagtgggtcggaaaccgatgcgaa 5855628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 10173034 - 10172973
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||||||||    
T  10173034 catgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaa 10172973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 26660183 - 26660243
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  26660183 catgcctctacgcatgagccggattagtcgc-cacctttggtgggtcggaaaccggtgcgaa 26660243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 43959884 - 43959823
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||||||    
T  43959884 catgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaa 43959823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 45361945 - 45361884
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||    
T  45361945 catgccactacgcataagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaa 45361884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 16956511 - 16956572
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||| ||||||| | |||||||||||||| |||||||    
T  16956511 catgcctctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgcgaa 16956572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 18915912 - 18915973
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||||||||  | |||||| |||||||||||||||    
T  18915912 catgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaa 18915973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 26325857 - 26325918
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||  | ||||||||||||||||||||||    
T  26325857 catgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 26325918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 49078159 - 49078220
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||||||||||||| |||||  | || |||||||||||||||||||    
T  49078159 catgcctctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcgaa 49078220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 5504074 - 5504137
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||||  ||||| |  |||||||||||||||| ||||    
T  5504074 cacatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaa 5504137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 4581745 - 4581684
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||| ||||||  ||||| | ||||||||||||||||||||||    
T  4581745 catgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaa 4581684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 8764036 - 8764097
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||  ||||  | ||||||||||||||||||||||    
T  8764036 catgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaa 8764097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 9659242 - 9659181
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||| ||||||||||||||||||||||  ||||| | |||||| |||||||||||||||    
T  9659242 catgcctttacgcatgagccggattagtcgtccacctttggtgggttggaaaccggtgcgaa 9659181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 10422833 - 10422894
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||  ||||| | ||  ||||||||||||||||||    
T  10422833 catgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaa 10422894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 17642067 - 17642006
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||  ||||| | ||||||||||||| ||||||||    
T  17642067 catgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaa 17642006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 32142909 - 32142848
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||| ||||||||||||| ||||||||||||||| |  |||||||||||||| ||||||    
T  32142909 catgcctttacgcatgagccgaattagtcgctcacctttgatgggtcggaaaccgatgcgaa 32142848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 34719821 - 34719882
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||| | |||||||||||||||| | ||||||||||||| ||||||||    
T  34719821 catgcctctacgcacgagtcagattagtcgctcacctttggtgggtcggaaactggtgcgaa 34719882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 37339865 - 37339926
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||| ||||| |||||||||||||||| ||||| | |||||| |||||||||||||||    
T  37339865 catgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaa 37339926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 41663919 - 41663858
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||| ||||||||||  ||||  | ||||||||||||||||||||||    
T  41663919 catgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 41663858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 11397951 - 11397891
Alignment:
Q  20 atgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||| |||||||||||  ||||| | |||||||||||| |||||||||    
T  11397951 atgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaa 11397891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 3850799 - 3850744
Alignment:
Q  25 tctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||| ||| |||||||||||| ||||| || |||||||||||||||||||||    
T  3850799 tctacgcacgaggcggattagtcgcccacctttaatgggtcggaaaccggtgcgaa 3850744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 30927790 - 30927732
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||||||  ||| | | ||||||| |||||||||||    
T  30927790 catgcctctacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgc 30927732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 50094949 - 50095007
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||| |||||||||||| |||||||||||  ||||  |||||||||||||||||||||    
T  50094949 catgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaaccggtgc 50095007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 10507747 - 10507796
Alignment:
Q  23 cctctacgcatgagccggattagtcgctcacctctagtgggtcggaaacc 72  Q
    ||||||||||||||||||||||||||  |||| || ||||||||||||||    
T  10507747 cctctacgcatgagccggattagtcgtccaccactggtgggtcggaaacc 10507796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 21849268 - 21849207
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||||||||||||||||||||   | |||||||| |||||||| ||||    
T  21849268 catgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaaccggtacgaa 21849207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 32150985 - 32150924
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||| ||||||||||||| ||||||||||||||| |  ||||||| |||||| ||||||    
T  32150985 catgcctttacgcatgagccgaattagtcgctcacctttgatgggtcgaaaaccgatgcgaa 32150924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 33004078 - 33004017
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||| | ||||  | |||||||| |||||||||||||    
T  33004078 catgcctctacgcacgagccggattagtcacccaccaatggtgggtcgaaaaccggtgcgaa 33004017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 34697380 - 34697441
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||||||||| ||| | |  ||||| |||||||| ||||||    
T  34697380 catgcctctacgcatgagccggattagtcgcccacttttgatgggttggaaaccgatgcgaa 34697441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 35211235 - 35211178
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    ||||||||||||||||||| | ||||||||  ||||| | ||||||||||||||||||    
T  35211235 catgcctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtg 35211178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 50503424 - 50503363
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||| ||||| ||||  | ||||||||||||||| ||||||    
T  50503424 catgcctctacgcacgagccggatttgtcgcccaccaatggtgggtcggaaaccgatgcgaa 50503363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 15466008 - 15466064
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccg 73  Q
    |||||||||||||||| ||| | |||| ||||||||||| | |||||||||||||||    
T  15466008 cacatgcctctacgcacgagtctgattggtcgctcacctttggtgggtcggaaaccg 15466064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 45726491 - 45726435
Alignment:
Q  24 ctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||||||| |||||| | |||| ||||| || ||||||||    
T  45726491 ctctacgcatgagccggattagtcgttcacctttggtggatcggagactggtgcgaa 45726435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 892355 - 892304
Alignment:
Q  29 cgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||| ||||| | |||| ||||||| |||||||||    
T  892355 cgcatgagccggattagtcgcccacctttggtggatcggaaatcggtgcgaa 892304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 28324643 - 28324608
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacc 54  Q
    ||||||||||||||||||||||||||||| ||||||    
T  28324643 catgcctctacgcatgagccggattagtcactcacc 28324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 35908803 - 35908859
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||||||||||||||||||||||  |||  |  |||||||||||||||||||    
T  35908803 catgcctctacgcatgagccggattagtcgtccac--catgtgggtcggaaaccggtgc 35908859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 51437512 - 51437563
Alignment:
Q  29 cgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||||   ||||| | ||||||||||||||||||||||    
T  51437512 cgcatgagccggattagtcatccacctttggtgggtcggaaaccggtgcgaa 51437563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 40288540 - 40288482
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    ||||||||||| || ||||||||||||||||||| |  | |||||||||||||| ||||    
T  40288540 catgcctctacacacgagccggattagtcgctcatccttggtgggtcggaaaccagtgc 40288482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 2980994 - 2980933
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| ||| |||||||||||  ||  | |||||||||||||| |||||||||    
T  2980994 catgcctctacgcacgagtcggattagtcgtccatgtttagtgggtcggaaatcggtgcgaa 2980933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 6899603 - 6899664
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||| ||||||  ||||||||||||||| ||||| |  ||| |||||||||||||||||    
T  6899603 catgcctttacgcacaagccggattagtcgcccacctttgatggatcggaaaccggtgcgaa 6899664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 14254331 - 14254278
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaacc 72  Q
    ||||||| ||||||||||||||||||||||  ||||| |  |||||||||||||    
T  14254331 catgcctttacgcatgagccggattagtcgtccacctttgatgggtcggaaacc 14254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 18649415 - 18649354
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||| | ||||| ||||| |||| ||||| |||||| | |||||||||||||||    
T  18649415 catgcctctacgtacgagccagattaatcgcccacctttagtggattggaaaccggtgcgaa 18649354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Complemental strand, 33498902 - 33498873
Alignment:
Q  19 catgcctctacgcatgagccggattagtcg 48  Q
    ||||||||||||||||||||||||||||||    
T  33498902 catgcctctacgcatgagccggattagtcg 33498873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 50371897 - 50371836
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| ||||||||  ||||||||||||||| || || | |||| |||||||||||||||||    
T  50371897 catgcttctacgcacaagccggattagtcgcccatctttggtggatcggaaaccggtgcgaa 50371836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 18708603 - 18708567
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacct 55  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  18708603 catgcctctacacatgagccagattagtcgctcacct 18708567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 25165445 - 25165501
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggt 75  Q
    |||||||||| |||  ||||||||||||| ||||||| | ||||||||| |||||||    
T  25165445 catgcctctaggcacaagccggattagtcactcacctttggtgggtcggtaaccggt 25165501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 48798133 - 48798105
Alignment:
Q  19 catgcctctacgcatgagccggattagtc 47  Q
    |||||||||||||||||||||||||||||    
T  48798133 catgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 186562 - 186621
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtg 76  Q
    |||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||    
T  186562 cacatgcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtg 186621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 224362 - 224425
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||| |||||||||| |||||||||||||||  || || | ||||||||||||||||||||||    
T  224362 cacatacctctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaa 224425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 155773 - 155712
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| ||||| | ||||||||||| ||||||||||    
T  155773 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaa 155712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 250087 - 250026
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||||| ||| | |||||||||||| |||||||||    
T  250087 catgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaa 250026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 68561 - 68621
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcga 79  Q
    |||||||||||||| |||||||||||||||| ||||| | |||||||| ||||||||||||    
T  68561 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 68621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 1676 - 1615
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||||||  ||||||||| ||||| | |||||||| |||||||||||||    
T  1676 catgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcgaa 1615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 8761 - 8702
Alignment:
Q  21 tgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||||| ||||||||||  ||||| | ||||||||||||| ||||||||    
T  8761 tgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaa 8702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 12717 - 12778
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| || ||||||||||||| ||||| |  |||||| ||||||||||||||    
T  12717 catgcctctacgcacgaaccggattagtcgcccacctttgatgggtcagaaaccggtgcgaa 12778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 41091 - 41152
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||| |||||||||||||||| || || | ||| ||||||||||||| ||||    
T  41091 catgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccggttcgaa 41152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 7897 - 7836
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||||||||| ||| ||||||||||| ||||| | |||| |||||||||||| ||||    
T  7897 catgcctctacgcattagctggattagtcgcccacctttggtggatcggaaaccggtacgaa 7836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 95043 - 94984
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacc-tctagtgggtcggaaaccggtgc 77  Q
    ||||||| ||||||||||||||||||||||| |||| | | |||||||||||| ||||||    
T  95043 catgcctttacgcatgagccggattagtcgcccaccatttggtgggtcggaaatcggtgc 94984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 16931 - 16987
Alignment:
Q  24 ctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    ||||||||| ||||| |||||||||||||||| | |||||| |||||||| ||||||    
T  16931 ctctacgcacgagccagattagtcgctcacctttggtgggttggaaaccgatgcgaa 16987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 72802 - 72860
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgc 77  Q
    |||||||| ||||||||||||||||||||||  ||| |  |||||||| ||||||||||    
T  72802 catgcctcaacgcatgagccggattagtcgcctaccacaggtgggtcgaaaaccggtgc 72860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 12620 - 12681
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||||||||||||||||| |||||||||||| ||||| |  ||| |  ||||||||||||||    
T  12620 catgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaa 12681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 9892 - 9945
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaacc 72  Q
    |||||||||||||| |||||||||||||||  ||||| | ||||||| ||||||    
T  9892 catgcctctacgcacgagccggattagtcgtccacctttggtgggtcagaaacc 9945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 65214 - 65153
Alignment:
Q  19 catgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccggtgcgaa 80  Q
    |||| |||||||||||||| ||||||||||||||| | |  | | |||||||||||||||||    
T  65214 catgtctctacgcatgagctggattagtcgctcacttttgatagatcggaaaccggtgcgaa 65153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 6017 - 6073
Alignment:
Q  17 cacatgcctctacgcatgagccggattagtcgctcacctctagtgggtcggaaaccg 73  Q
    |||||||||||||||||||| || ||||||||  ||||  | |||||||||||||||    
T  6017 cacatgcctctacgcatgagacgaattagtcgtccaccattggtgggtcggaaaccg 6073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University