View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18228_low_8 (Length: 555)

Name: NF18228_low_8
Description: NF18228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18228_low_8
NF18228_low_8
[»] chr5 (19 HSPs)
chr5 (6-329)||(3299690-3300013)
chr5 (6-329)||(3392583-3392906)
chr5 (6-308)||(1163333-1163638)
chr5 (344-454)||(1163145-1163252)
chr5 (32-213)||(1850127-1850293)
chr5 (459-538)||(1163030-1163109)
chr5 (32-308)||(40418478-40418758)
chr5 (1-83)||(39169016-39169101)
chr5 (356-436)||(40418870-40418950)
chr5 (168-308)||(38988036-38988180)
chr5 (6-308)||(39879989-39880297)
chr5 (460-536)||(40418993-40419069)
chr5 (306-345)||(1163270-1163309)
chr5 (6-308)||(39726593-39726906)
chr5 (6-95)||(38987874-38987963)
chr5 (356-400)||(38988292-38988336)
chr5 (368-436)||(39880427-39880495)
chr5 (379-436)||(3300086-3300147)
chr5 (379-436)||(3392979-3393040)
[»] chr4 (5 HSPs)
chr4 (460-536)||(25911553-25911629)
chr4 (164-308)||(44444395-44444543)
chr4 (168-263)||(25911951-25912046)
chr4 (356-436)||(25911695-25911775)
chr4 (1-88)||(25912122-25912209)


Alignment Details
Target: chr5 (Bit Score: 292; Significance: 1e-164; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 6 - 329
Target Start/End: Original strand, 3299690 - 3300013
Alignment:
Q  6 aatggtagaattgttgttggtgagggtaagtgggaatctgagtatcaactctttgtaaaagatctacaacaagacactaaactcctcttcgaccgaagag 105  Q
    ||||||||| |||||| || | ||| ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  3299690 aatggtagagttgttgctgttcaggataagtgggaatctgattatcaactcttcttaaaagatctacaacaagacactaaactcctcttcgaccgaagag 3299789  T
Q  106 caatctaccgaaatcgaaccaactgccatccatttgacacaaccatcaaatccccctttagaagacctttttatccattggaggatttgcttgatggatg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3299790 caatctaccgaaatcgaaccaactgccatccatttgacacaaccatcaaatccccctttagaagacctttttatccattggaggatttgcttgatggatg 3299889  T
Q  206 atccacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataaccaaaacaaggaagatgcttttcatttattagcttttttcta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3299890 atccacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataaccaaaacaaggaagatgcttttcatttattagcttttttcta 3299989  T
Q  306 tttattccgataacaagaacaact 329  Q
    ||||||||||||||||||||||||    
T  3299990 tttattccgataacaagaacaact 3300013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 6 - 329
Target Start/End: Original strand, 3392583 - 3392906
Alignment:
Q  6 aatggtagaattgttgttggtgagggtaagtgggaatctgagtatcaactctttgtaaaagatctacaacaagacactaaactcctcttcgaccgaagag 105  Q
    ||||||||| |||||| || | ||| ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  3392583 aatggtagagttgttgctgttcaggataagtgggaatctgattatcaactcttcttaaaagatctacaacaagacactaaactcctcttcgaccgaagag 3392682  T
Q  106 caatctaccgaaatcgaaccaactgccatccatttgacacaaccatcaaatccccctttagaagacctttttatccattggaggatttgcttgatggatg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3392683 caatctaccgaaatcgaaccaactgccatccatttgacacaaccatcaaatccccctttagaagacctttttatccattggaggatttgcttgatggatg 3392782  T
Q  206 atccacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataaccaaaacaaggaagatgcttttcatttattagcttttttcta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3392783 atccacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataaccaaaacaaggaagatgcttttcatttattagcttttttcta 3392882  T
Q  306 tttattccgataacaagaacaact 329  Q
    ||||||||||||||||||||||||    
T  3392883 tttattccgataacaagaacaact 3392906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 6 - 308
Target Start/End: Complemental strand, 1163638 - 1163333
Alignment:
Q  6 aatggtagaattgttgttggtgagggtaagtgggaatctgagtatcaactctttgtaaaagatctacaacaagacactaaactcctcttcgaccgaagag 105  Q
    ||||||||| |||||  || | ||| ||||||||||||||  |||||||||||  |||||||||||||||||||| |||||||||||||||||| |||||    
T  1163638 aatggtagagttgttcctgttcaggataagtgggaatctggttatcaactcttcttaaaagatctacaacaagaccctaaactcctcttcgaccaaagag 1163539  T
Q  106 caatctaccgaaatcgaaccaactgccatccatttgacacaaccatcaaatccccctttagaagacctttttatccattggaggatttgcttgatggatg 205  Q
    ||||||||||||||| |||| |||||||||||| || | ||  | ||| ||||||||||   |||||||||| |||||||||||||||||||||||||||    
T  1163538 caatctaccgaaatccaacctactgccatccatctggcccactcttcagatcccccttttatagacctttttttccattggaggatttgcttgatggatg 1163439  T
Q  206 at---ccacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataaccaaaacaaggaagatgcttttcatttattagctttttt 302  Q
    ||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1163438 atgatctacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataacaaaaacaaggaagatgcttttcatttattagctttttt 1163339  T
Q  303 ctattt 308  Q
     |||||    
T  1163338 atattt 1163333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 344 - 454
Target Start/End: Complemental strand, 1163252 - 1163145
Alignment:
Q  344 tttatgtttatcagaacaagttatgtgtgtttatcgtgcttccgaaaccatgcctgtcattatatttggcatataaagttcctttcaccatttactactt 443  Q
    ||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||   |||||    
T  1163252 tttatgtttattagaacaagttatgtgtgttgatcgtgcttcccaaaccatgcctgtcattatattcggcatataaagttcctttcaccatt---tactt 1163156  T
Q  444 tcctgtcttcc 454  Q
    |||||||||||    
T  1163155 tcctgtcttcc 1163145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 32 - 213
Target Start/End: Original strand, 1850127 - 1850293
Alignment:
Q  32 taagtgggaatctgagtatcaactctttgtaaaagatctacaacaagacactaaactcctcttcgaccgaagagcaatctaccgaaatcgaaccaactgc 131  Q
    ||||||||||||||| |||||||||||  |||||||| ||||||||||| |||||||||||||||||||||               ||| ||||||||||    
T  1850127 taagtgggaatctgattatcaactcttcttaaaagatttacaacaagaccctaaactcctcttcgaccgaa---------------atccaaccaactgc 1850211  T
Q  132 catccatttgacacaaccatcaaatccccctttagaagacctttttatccattggaggatttgcttgatggatgatccactt 213  Q
    ||||||| || | || |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1850212 catccatctggcccacccatcagatccccttttagaagacctttttatccattggaggatttgcttgatggatgatctactt 1850293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 459 - 538
Target Start/End: Complemental strand, 1163109 - 1163030
Alignment:
Q  459 gtaagcagctaatatgcattggtttgatcttctctgctatgtatatatctgtttcgtaaatcttaaacagttgtttgttt 538  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  1163109 gtaagcagctaatatgcattggtttgatcttctctgctatgtaaatatctgtttcgtaaattttaaacagttgtttgttt 1163030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 32 - 308
Target Start/End: Original strand, 40418478 - 40418758
Alignment:
Q  32 taagtgggaatctgagtatcaactctttgtaaaagatctacaacaagacactaaactcctcttcgaccgaagagcaatctaccgaaatcgaaccaactgc 131  Q
    ||||||||||||||| |||||||||||  | || |||||||||||||||||||||||||||||| ||  |||||||  ||||||| ||| ||||||  ||    
T  40418478 taagtgggaatctgattatcaactcttcttcaatgatctacaacaagacactaaactcctcttcaacgtaagagcagcctaccgagatcaaaccaaaagc 40418577  T
Q  132 catccatttgacacaaccatca-aatccccctttagaagacctttttatccattggaggatttgcttgatggatgatccacttacaagcttaaacaaaca 230  Q
     |  ||| |||     || ||  |||||||| | |  |||||||||  |||||||||||| |||||||| |||||||| | |||| |||||||||||| |    
T  40418578 tacacatatgatgggcccttcgtaatcccccct-accagaccttttgttccattggaggacttgcttgacggatgatctagttactagcttaaacaaaaa 40418676  T
Q  231 tcacttctattgatgttttgttacttccaataac--caaaa--caaggaagatgcttttcatttattagcttttttctattt 308  Q
    |||||| | || ||||||||||  ||||||||||  |||||  |||||||||||||||||||||||||| || |||||||||    
T  40418677 tcacttttgttaatgttttgtttgttccaataacaacaaaaatcaaggaagatgcttttcatttattaggttctttctattt 40418758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39169016 - 39169101
Alignment:
Q  1 aagaaaatggtagaattgttgttggtg---agggtaagtgggaatctgagtatcaactctttgtaaaagatctacaacaagacact 83  Q
    |||||||||||||||||||||||| ||   ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  39169016 aagaaaatggtagaattgttgttgttgttgagggtaagtgggaatctgattatcaactctttttaaaagatctacaacaagacact 39169101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 356 - 436
Target Start/End: Original strand, 40418870 - 40418950
Alignment:
Q  356 agaacaagttatgtgtgtttatcgtgcttccgaaaccatgcctgtcattatatttggcatataaagttcctttcaccattt 436  Q
    ||||||||||| ||||||| ||||||||||  |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  40418870 agaacaagttacgtgtgttgatcgtgcttcacaaaccatgcctgtcattatattcggcataaaaagttcctttcaccattt 40418950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 168 - 308
Target Start/End: Original strand, 38988036 - 38988180
Alignment:
Q  168 agacctttttatccattggaggatttgcttgatggatgatccacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataacca- 266  Q
    ||||||||| ||||||||||||| |||||||| |||||||| | | || |||||||||||| ||||||| | |||||||||||||  |||||||||| |     
T  38988036 agaccttttgatccattggaggacttgcttgacggatgatctagtcactagcttaaacaaaaatcacttttgttgatgttttgtttgttccaataacaac 38988135  T
Q  267 ---aaacaaggaagatgcttttcatttattagcttttttctattt 308  Q
       || |||||||| |||| |||||||||||| || |||||||||    
T  38988136 aacaatcaaggaagctgctcttcatttattaggttctttctattt 38988180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 39879989 - 39880297
Alignment:
Q  6 aatggtagaattgttgttggtgagggtaagtgggaatctgagtatcaactctttgtaaaagatctacaacaagacactaaactcctcttcgaccgaagag 105  Q
    ||||||||| |||||| ||   ||| ||||||||||||||| |||||||||||  | || |||||||||||| ||||||||||| |||||  |  |||||    
T  39879989 aatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaaaacactaaactcatcttcagcgtaagag 39880088  T
Q  106 caatctaccgaaatcgaaccaactgccatccatttgacacaaccatca-aatccccctttagaagacctttttatccattggaggatttgcttgatggat 204  Q
    ||  ||||||| ||| ||||||  || |  ||| |||     || ||| |||||||| | |  |||||||||| |||||||||||| |||||||| ||||    
T  39880089 cagcctaccgagatcaaaccaaaagctacacatatgatgggcccttcagaatcccccct-accagacctttttttccattggaggacttgcttgacggat 39880187  T
Q  205 gatccacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataacca-------aaacaaggaagatgcttttcatttattagct 297  Q
    |||| | |||| |||||||||||| ||||||| | |||||||||| ||  |||||||||  |       || |||||||||||||||||||||||||| |    
T  39880188 gatctagttactagcttaaacaaaaatcacttttgttgatgtttt-tttgttccaataataacaacaacaatcaaggaagatgcttttcatttattaggt 39880286  T
Q  298 tttttctattt 308  Q
    | |||||||||    
T  39880287 tctttctattt 39880297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 460 - 536
Target Start/End: Original strand, 40418993 - 40419069
Alignment:
Q  460 taagcagctaatatgcattggtttgatcttctctgctatgtatatatctgtttcgtaaatcttaaacagttgtttgt 536  Q
    ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||| ||||||| |||||    
T  40418993 taagcagctaatatgcattggttcgatcttctctgctacgtaaatatctgtttcataaatctttaacagttatttgt 40419069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 345
Target Start/End: Complemental strand, 1163309 - 1163270
Alignment:
Q  306 tttattccgataacaagaacaacttactttgttgcaattt 345  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1163309 tttattccgataacaagaacaacttactttgttgcaattt 1163270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 39726593 - 39726906
Alignment:
Q  6 aatggtagaattgttgttggtgagggtaagtgggaatctgagtatcaactctttgtaaaagatctacaacaagacactaaactcctcttcgaccgaagag 105  Q
    ||||||||| |||||| ||   ||| ||||||||||||||| |||||||||||  | || ||||||||||||||| || |||| |||||| |   || ||    
T  39726593 aatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaagaccctcaactactcttcaagataacag 39726692  T
Q  106 caatctaccgaaatcgaaccaactgccatccatttgacacaaccatcaaatccccctttagaagacctttttatccattggaggatttgcttgatggatg 205  Q
    ||  ||||||||||| || ||||  | |  ||| ||||    || ||  |  ||||  ||  ||||||||| ||||||||||||| |||||||| |||||    
T  39726693 caccctaccgaaatccaaacaaccactacacatatgacgggcccttcgtagacccccctatcagaccttttgatccattggaggacttgcttgacggatg 39726792  T
Q  206 at----ccacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataacca-------aaacaaggaagatgcttttcatttatta 294  Q
    ||    | | |||| |||||||||||| ||||| | | |||||||||||||  |||||||||  |       || |||||||||||||||||||||||||    
T  39726793 atctagctagttactagcttaaacaaaaatcacctttgttgatgttttgtttgttccaataataacaacaacaatcaaggaagatgcttttcatttatta 39726892  T
Q  295 gcttttttctattt 308  Q
    | || |||||||||    
T  39726893 ggttctttctattt 39726906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 38987874 - 38987963
Alignment:
Q  6 aatggtagaattgttgttggtgagggtaagtgggaatctgagtatcaactctttgtaaaagatctacaacaagacactaaactcctcttc 95  Q
    ||||||||| |||||| ||   ||| ||||||||||||||| |||||||||||  | || ||||||||||||||| || |||| ||||||    
T  38987874 aatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaagaccctcaactactcttc 38987963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 400
Target Start/End: Original strand, 38988292 - 38988336
Alignment:
Q  356 agaacaagttatgtgtgtttatcgtgcttccgaaaccatgcctgt 400  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||    
T  38988292 agaacaagttatgtgtgttgatcttgcttcccaaaccatgcctgt 38988336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 436
Target Start/End: Original strand, 39880427 - 39880495
Alignment:
Q  368 gtgtgtttatcgtgcttccgaaaccatgcctgtcattatatttggcatataaagttcctttcaccattt 436  Q
    ||||||| ||| ||||||| ||| |||| |||||| |||||| |||||| |||||| ||||||||||||    
T  39880427 gtgtgttgatcttgcttcccaaaacatgtctgtcaatatattcggcataaaaagttactttcaccattt 39880495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 436
Target Start/End: Original strand, 3300086 - 3300147
Alignment:
Q  379 gtgcttccgaaaccatgcctgtcatta----tatttggcatataaagttcctttcaccattt 436  Q
    |||||||| ||||||||| ||||||||    |||| |||||||||||| |||||||||||||    
T  3300086 gtgcttcccaaaccatgcatgtcattaattatattcggcatataaagtacctttcaccattt 3300147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 436
Target Start/End: Original strand, 3392979 - 3393040
Alignment:
Q  379 gtgcttccgaaaccatgcctgtcatta----tatttggcatataaagttcctttcaccattt 436  Q
    |||||||| ||||||||| ||||||||    |||| |||||||||||| |||||||||||||    
T  3392979 gtgcttcccaaaccatgcatgtcattaattatattcggcatataaagtacctttcaccattt 3393040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 6e-26; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 460 - 536
Target Start/End: Complemental strand, 25911629 - 25911553
Alignment:
Q  460 taagcagctaatatgcattggtttgatcttctctgctatgtatatatctgtttcgtaaatcttaaacagttgtttgt 536  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  25911629 taagcagctaatatacattggtttgatcttctctgctatgtaaatatctgtttcataaatctttaacagttgtttgt 25911553  T

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Target: chr4; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 164 - 308
Target Start/End: Complemental strand, 44444543 - 44444395
Alignment:
Q  164 tagaagacctttttatccattggaggatttgcttgatggatgatccacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataa 263  Q
    ||||||| |||||  |||||| ||||| |||||||| |||||||| | ||||||||||||||||| ||||||| | |||||||||||||   ||||||||    
T  44444543 tagaagatcttttgttccattagaggacttgcttgacggatgatctagttacaagcttaaacaaaaatcacttttgttgatgttttgtttactccaataa 44444444  T
Q  264 ccaaaa----caaggaagatgcttttcatttattagcttttttctattt 308  Q
    | ||||    ||||||| |||| ||||||||||||| || |||||||||    
T  44444443 cgaaaacaatcaaggaatatgcctttcatttattaggttatttctattt 44444395  T

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Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 25912046 - 25911951
Alignment:
Q  168 agacctttttatccattggaggatttgcttgatggatgatccacttacaagcttaaacaaacatcacttctattgatgttttgttacttccaataa 263  Q
    |||||||||  |||||||||||| |||||||| |||||||| | |||| |||||||||||| ||||||| | |||||||||||||  |||||||||    
T  25912046 agaccttttgttccattggaggacttgcttgacggatgatctagttactagcttaaacaaaaatcacttttgttgatgttttgtttgttccaataa 25911951  T

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Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 436
Target Start/End: Complemental strand, 25911775 - 25911695
Alignment:
Q  356 agaacaagttatgtgtgtttatcgtgcttccgaaaccatgcctgtcattatatttggcatataaagttcctttcaccattt 436  Q
    ||||||||||| ||||||| ||| ||||||| |||||||| ||||||||||||| |||||| ||| |||||||||| ||||    
T  25911775 agaacaagttacgtgtgttgatcatgcttcccaaaccatgtctgtcattatattcggcataaaaaattcctttcactattt 25911695  T

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Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25912209 - 25912122
Alignment:
Q  1 aagaaaatggtagaattgttgttggtgagggtaagtgggaatctgagtatcaactctttgtaaaagatctacaacaagacactaaact 88  Q
    |||| ||||||||| |||||| || | ||| ||||||||||||||| |||||||||||  ||||  ||||||| |||||| |||||||    
T  25912209 aagagaatggtagagttgttgctgttcaggataagtgggaatctgattatcaactcttcttaaattatctacagcaagaccctaaact 25912122  T

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