View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18230_low_1 (Length: 759)
Name: NF18230_low_1
Description: NF18230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18230_low_1 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 397; Significance: 0; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 74 - 740
Target Start/End: Original strand, 22888993 - 22889662
Alignment:
| Q |
74 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgag |
173 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | | ||||||||||||||||||| |
|
|
| T |
22888993 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaagaatatactgagaagctaccattaaccctgttgaagatgag |
22889092 |
T |
|
| Q |
174 |
aatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaa---------caacatcaattggag |
264 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| | |
|
|
| T |
22889093 |
aatccaacatacattctattgttgagaattgaagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcaccaacactcattggtg |
22889192 |
T |
|
| Q |
265 |
ctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcata |
364 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| |||| | | ||||| |||| || | | | ||||| | |
|
|
| T |
22889193 |
ctaaagtaacatcaatctttttcttcactccatcatattcaatccatacctgcatagggtatccactggaaagggataaatccttgaattgaccataac- |
22889291 |
T |
|
| Q |
365 |
atcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatct |
464 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
22889292 |
-----catcataatatcctgcaggagttgaatcagctgatttcaaatcattgatatcaattccaacatggttatcgttgatatcatcaaactcaaaattt |
22889386 |
T |
|
| Q |
465 |
tgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggta |
564 |
Q |
| |
|
||| |||||||| ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22889387 |
tgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccactgttggaatcgttaaagagaccaaggtattgacttggtagtgaatctggta |
22889486 |
T |
|
| Q |
565 |
gcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacac |
664 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22889487 |
gcccttttgttggagaaataacaaaaacaattccatggccaccaatatttgcatattgaggtattatggcaaataaaaaagtagttgagaaagaagacac |
22889586 |
T |
|
| Q |
665 |
actttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattg |
740 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | |||||| |
|
|
| T |
22889587 |
gctttcactggaagtgtttttgaaaactattggatttggatagaaaccatgtcctttgtctctttctgtatcattg |
22889662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 14 - 740
Target Start/End: Original strand, 22814668 - 22815397
Alignment:
| Q |
14 |
caaaggcaacccaacagttaaaaattttgacnnnnnnnnctcatcaaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccatta |
113 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||| |||||| |||||||| |||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
22814668 |
caaaggcaacccaacagttaaaaatttagacttttttacctcagcaaatactgttagcttaggaagttcagatatttcaaggttttgagcttggccatta |
22814767 |
T |
|
| Q |
114 |
accttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagat |
213 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
22814768 |
accttaaaactccacccaagaatataatgagaagctacaagtaaccctgttgaagatgagaatccaacatacattctattgttgagaattgaagaaagat |
22814867 |
T |
|
| Q |
214 |
cattggtcaatgataacaaaggtcgtgttggtttaa---------caacatcaattggagctaaagtaacattaatctttttgttcactccatcatattc |
304 |
Q |
| |
|
| ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||| || |
|
|
| T |
22814868 |
ctttggtcaatgataacaaaggttgtgttggtttattactagcaccaacactcattggagctaaagtaacatcaatctttttcttcactccatcatagtc |
22814967 |
T |
|
| Q |
305 |
aatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcataatcatcatcataatatcctgcaggagttgaattagctgat |
404 |
Q |
| |
|
||||||||||| ||| | |||| | ||||| |||| |||| | | ||||| || ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
22814968 |
aatccatacctgtataggaaatccattggaaagggataactccctgaattgaccatgat------cattataatatcctgcaggagttgaattagctgat |
22815061 |
T |
|
| Q |
405 |
tgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctac |
504 |
Q |
| |
|
| ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| |||||||||||||| ||| |
|
|
| T |
22815062 |
ttcaaataattgatatcgataccaacatggttatcattgatatcatcaaactgcaaatcttgacgagtgtcaagctcaacaccaaaaacatggttgttac |
22815161 |
T |
|
| Q |
505 |
tgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagcccttttgttggagaaataacaaaaacaattccatggcc |
604 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| |
|
|
| T |
22815162 |
tgtttccattgttggaatcgttaaagagaccaaggtattgacttggtagtgaatttggtagcccttttgtaggagaaagaacaaaaacaattccttggcc |
22815261 |
T |
|
| Q |
605 |
accaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttcactagaagtgtttttgaaaactattggatttgga |
704 |
Q |
| |
|
|| || || ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |
|
|
| T |
22815262 |
actaaaaggtggatattgaggtcttattgcaaacacaaaagtagttgagaaagaagacacactttcattggaagtgtttttgaaaactataggatttgga |
22815361 |
T |
|
| Q |
705 |
tagaaagcatgtcctttggctctttctatttcattg |
740 |
Q |
| |
|
|||||||||| |||||||||||||||| | |||||| |
|
|
| T |
22815362 |
tagaaagcatatcctttggctctttctgtatcattg |
22815397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 74 - 721
Target Start/End: Original strand, 22875623 - 22876267
Alignment:
| Q |
74 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgag |
173 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||| ||||||||||||||| |
|
|
| T |
22875623 |
aggaagttcagagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgag |
22875722 |
T |
|
| Q |
174 |
aatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggttta--acaa-catcaattggagctaaag |
270 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| || | |||| ||||||||||||| |
|
|
| T |
22875723 |
aatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcatctattggagctaaag |
22875822 |
T |
|
| Q |
271 |
taacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcataatcatc |
370 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||||||||||||| ||| | |||| | ||||||| |||| |||| | | | || ||| ||||| |
|
|
| T |
22875823 |
taacatcaatcttttttttcactccatcatagtcaatccatacctgcatgggatatccactgaaaagggataaatccctga---atcgattatattcatc |
22875919 |
T |
|
| Q |
371 |
atcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaaca |
470 |
Q |
| |
|
| ||||||||| || ||||||| ||||||||| |||||||||||||||||| |||||||||||||||| |||||||| ||||||| | |||| |
|
|
| T |
22875920 |
gt---aatatcctgtagaagttgaaatagctgatttcaaatcattgatatcaattccaacatggttatcatcgatatcattaaactcattagtcaaaaca |
22876016 |
T |
|
| Q |
471 |
gtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagccctt |
570 |
Q |
| |
|
| |||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
22876017 |
gaatcaagttcaacaccaaaaacatggttgctactgtttccattgtttgaattgttaaagagaccaaggtattgacgtggtagtgagtttggtagccctt |
22876116 |
T |
|
| Q |
571 |
ttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttc |
670 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22876117 |
ttgtaggagaaacaacaaaaacaattccatcaccactaatagttggatattgaggtcttatggcaaatacaaaagtagttgagaaagaagacacacttcc |
22876216 |
T |
|
| Q |
671 |
actagaagtgtttttgaaaactattggatttggatagaaagcatgtccttt |
721 |
Q |
| |
|
| | |||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
22876217 |
attggaagtgtttttgaaaactataggatttggatagaaaccatgtccttt |
22876267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 74 - 715
Target Start/End: Original strand, 22805019 - 22805654
Alignment:
| Q |
74 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgag |
173 |
Q |
| |
|
||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22805019 |
aggaaattgagagattacaaggttttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctgcaagtaaccctgttgaagatgag |
22805118 |
T |
|
| Q |
174 |
aatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaacaacatcaattggagctaaagtaa |
273 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
22805119 |
aatccaacatacatactattgttaagaattggagaaagatctttggtcattgataacgaaggtcctgttggtttaacaacataaactggagctaaagtaa |
22805218 |
T |
|
| Q |
274 |
cattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcataatcatcatc |
373 |
Q |
| |
|
||| ||||||||| |||||||||||||| ||||||||||||| ||| | ||| | | |||||| || | || | | ||||| || |||| |
|
|
| T |
22805219 |
catcaatctttttcttcactccatcataatcaatccatacctgtataggatttccactggaaaggtctactgttctgatttgaccatgat------catc |
22805312 |
T |
|
| Q |
374 |
ataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtg |
473 |
Q |
| |
|
||||| |||||| |||||| | |||||| || ||||||||||| ||||||| | ||||||| | | |||| ||||||||||||||| | |||| |
|
|
| T |
22805313 |
gtaataggctgcagtagttgagacaactgatttcagatcattgatattaataccatcgtggttattgtcaacatcaccaaactcaaaatctttagaagtg |
22805412 |
T |
|
| Q |
474 |
tcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagcccttttg |
573 |
Q |
| |
|
|||| |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
22805413 |
tcaagttcaacaccaaaaacatggttgccactgtttccattgttggaatcattaaagagaccaaggtattgatttggtagtgaatttggtagcccttttg |
22805512 |
T |
|
| Q |
574 |
ttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttcact |
673 |
Q |
| |
|
||||||||| |||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22805513 |
ttggagaaagaacaaaaacaattccatggccagtaaaaggtggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttcact |
22805612 |
T |
|
| Q |
674 |
agaagtgtttttgaaaactattggatttggatagaaagcatg |
715 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22805613 |
ggaagtgtttttgaaaactattggatttggatagaaagcatg |
22805654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 53 - 721
Target Start/End: Original strand, 22897952 - 22898614
Alignment:
| Q |
53 |
ctcatcaaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgca |
152 |
Q |
| |
|
|||| ||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
22897952 |
ctcaccaaatcttggtagcttaggaagttcagagattacaaggttttcagcttgaccattaaccttaaaactccaaccaagaatataatgagaagtgaaa |
22898051 |
T |
|
| Q |
153 |
agtaaccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaacaa |
252 |
Q |
| |
|
| | | || || | ||||| |||||||||||||| |||||||| | ||||||||||||||| |||||||||| ||||||||| || |||||||||||| |
|
|
| T |
22898052 |
actgaaccagtagctgatgaaaatccaacatacatactattgtttaaaattggagaaagatctctggtcaatgacaacaaaggttgttttggtttaacaa |
22898151 |
T |
|
| Q |
253 |
catcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcag |
352 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||| || | |||||||||||||||||||||| |||| | || | ||||||| || | | || |
|
|
| T |
22898152 |
cattaattggagctaaagtaacatcaatctttttcttttcaccatcatattcaatccatacctgcataggattgccactgaaaagggtcaaattcttgag |
22898251 |
T |
|
| Q |
353 |
ataaccatcataatcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatca |
452 |
Q |
| |
|
| ||||| ||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22898252 |
ttgaccat--taa----catcataatatcctgcaggagttgatttagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatta |
22898345 |
T |
|
| Q |
453 |
aactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggta |
552 |
Q |
| |
|
|||||| | || ||| |||| |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | ||| |
|
|
| T |
22898346 |
aactcactactaataatagtatcaagttcaacaccaaaaacatggttgctactatttccattgttggatttgttaaagagaccaaggtattgactttgta |
22898445 |
T |
|
| Q |
553 |
gtgaatctggtagcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttga |
652 |
Q |
| |
|
|||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
22898446 |
gtgaatttggtagcccttttgtaggagagacaacaaaaacaattccatggccactaagagttggatattgaggtcttatggcaaacacaaaagtagttga |
22898545 |
T |
|
| Q |
653 |
gaaagaagacacactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtccttt |
721 |
Q |
| |
|
||||||||| |||||| || |||||||||| ||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
22898546 |
gaaagaagaaacacttccattagaagtgttcttgaaaactataggatttggatagaaagcatgtgcttt |
22898614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 73 - 721
Target Start/End: Original strand, 22839752 - 22840403
Alignment:
| Q |
73 |
caggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatga |
172 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22839752 |
caggaaggtcagagatttcaaggttttgagattggccattaaccataaaactccaaccatgaatataatgagaagctgcaatgaaccctgttgaagatga |
22839851 |
T |
|
| Q |
173 |
gaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaa---------caacatcaattgga |
263 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||| ||||||||||| ||||| || |||| |
|
|
| T |
22839852 |
gaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtgttggtttatgactaaaaccaacactaaatgga |
22839951 |
T |
|
| Q |
264 |
gctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcat |
363 |
Q |
| |
|
||||| ||||||| ||||||||| ||||||| |||||||||||||||||| | |||| | |||| | | | ||| |||| |||| | | | || || |
|
|
| T |
22839952 |
gctaaggtaacatcaatctttttcttcactctatcatattcaatccatacttgcataggatatccactggagagggataaatccctga---atcgattat |
22840048 |
T |
|
| Q |
364 |
aatcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatc |
463 |
Q |
| |
|
| ||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22840049 |
attcatcgt---aatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcactact |
22840145 |
T |
|
| Q |
464 |
ttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggt |
563 |
Q |
| |
|
| ||| ||| |||| |||||| ||||||||||||||| || ||||||| ||||||| | ||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
22840146 |
tagaagagtatcaagttcaacaccaaaaacatggttgccaccgtttccaatgttggattggttaaagagaccaaggtattgacttggtagtgaatttggt |
22840245 |
T |
|
| Q |
564 |
agcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagaca |
663 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||| || | |||||| ||||||||||||||||||||||||||| | |
|
|
| T |
22840246 |
agcccttttgtaggagaaataacgaaaacaattccatggccactaagagttggatatgaagattttatggaaaatacaaaagtagttgagaaagaagaaa |
22840345 |
T |
|
| Q |
664 |
cactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtccttt |
721 |
Q |
| |
|
||||| | || |||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
22840346 |
cacttccgctggaagtgtttttgaaaactataggatttggatagaaagcttgtccttt |
22840403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 73 - 714
Target Start/End: Original strand, 22830731 - 22831375
Alignment:
| Q |
73 |
caggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatga |
172 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22830731 |
caggaaggtcagagatttcaaggttttgagattggccattaaccataaaactccaaccatgaatataatgagaagctgcaatgaaccctgttgaagatga |
22830830 |
T |
|
| Q |
173 |
gaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggttt---------aacaacatcaattgga |
263 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||| |||||||||| | ||||| || |||| |
|
|
| T |
22830831 |
gaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtgttggtttatgactaaaaccaacactaactgga |
22830930 |
T |
|
| Q |
264 |
gctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcat |
363 |
Q |
| |
|
||||| ||||||| ||||||||| |||||||||||||||||||||||||||| |||| | ||| | | |||| |||| ||| | |||| || |
|
|
| T |
22830931 |
gctaaggtaacatcaatctttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtat |
22831030 |
T |
|
| Q |
364 |
aatcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatc |
463 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22831031 |
------catcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaattccaacatgattatcattgatatcatcaaactcaaaatt |
22831124 |
T |
|
| Q |
464 |
ttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggt |
563 |
Q |
| |
|
|| | |||||||| ||||||| |||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
22831125 |
tttacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaagagaccaaagtattgatttggtagtgaatttggt |
22831224 |
T |
|
| Q |
564 |
agcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagaca |
663 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||| || || |||||| | | |||||| |||||||||||||||||||||||| |||| |
|
|
| T |
22831225 |
agcccttttgtaggagaaagaacaaaaacaattccatggccactaatagatggatacatggattttatggtaaatacaaaagtagttgagaaagatgaca |
22831324 |
T |
|
| Q |
664 |
cactttcactagaagtgtttttgaaaactattggatttggatagaaagcat |
714 |
Q |
| |
|
||||| || | ||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
22831325 |
cacttgcattcgaagtgtttttaaaaactatatgatttggatagaaagcat |
22831375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 368 - 714
Target Start/End: Original strand, 22885592 - 22885934
Alignment:
| Q |
368 |
atcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttga |
467 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
22885592 |
atcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttga |
22885691 |
T |
|
| Q |
468 |
acagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagcc |
567 |
Q |
| |
|
||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| | | ||||||||| |||||||| |
|
|
| T |
22885692 |
tcagtgtcaagctcaataccaaaaacatggctgctactgtttccattgttggaattgtt--agagaccaaggtattaatattgtagtgaatttggtagcc |
22885789 |
T |
|
| Q |
568 |
cttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacact |
667 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||||| | |||||||||||| || | |||| ||||||| | || |||||||||||||||||||||| |
|
|
| T |
22885790 |
cttttgtaggtgaaataacaaaaacaattccatggccactatgagttggatattaagattttatagcaaataaagaattagttgagaaagaagacacact |
22885889 |
T |
|
| Q |
668 |
ttcactagaagtgtttttgaaaactattggatttggatagaaagcat |
714 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22885890 |
ttcact--gagtgtttttgaaaactataggatttggatagaaagcat |
22885934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 371 - 721
Target Start/End: Original strand, 22809645 - 22809995
Alignment:
| Q |
371 |
atcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaaca |
470 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | | ||| | |
|
|
| T |
22809645 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatatcatcaaactcactacttagaaga |
22809744 |
T |
|
| Q |
471 |
gtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagccctt |
570 |
Q |
| |
|
|| || | |||||| | ||||||||||| |||||||||||||||||||| | ||||||||||||||| ||||||| || | ||||| ||| ||||||| |
|
|
| T |
22809745 |
gtatctagttcaacaccgaaaacatggttactactgtttccattgttggattggttaaagagaccaagatattgacttgcttttgaatttggcagccctt |
22809844 |
T |
|
| Q |
571 |
ttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttc |
670 |
Q |
| |
|
|||| || |||| |||||| |||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22809845 |
ttgtaggtgaaacaacaaatacaattccatgggaactaagagttggatattgaggtcttatggcaaatacaaaagtagttgagaaagaagatacactttc |
22809944 |
T |
|
| Q |
671 |
actagaagtgtttttgaaaactattggatttggatagaaagcatgtccttt |
721 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22809945 |
actgatagtgtttttgaaaactacaggatttggatagaaagcatgtccttt |
22809995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 370 - 721
Target Start/End: Original strand, 22893944 - 22894295
Alignment:
| Q |
370 |
catcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaac |
469 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || || || |
|
|
| T |
22893944 |
catcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcacgattttcaat |
22894043 |
T |
|
| Q |
470 |
agtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagccct |
569 |
Q |
| |
|
||| |||| |||||| ||||||| ||||||||| |||||||||||||||| || |||||||||||||||| |||| | ||||||| |||||||||| |
|
|
| T |
22894044 |
agtatcaagttcaacaccaaaaacgtggttgctaggatttccattgttggaatcgtcaaagagaccaaggtatgaaccttggagtgaatttggtagccct |
22894143 |
T |
|
| Q |
570 |
tttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacacttt |
669 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||| | ||||||| |||| || |||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
22894144 |
tttgtaggagaaagaacaaaaacaattccatggccactataagttggaccttgatgtcttatggcaaatacaaaagtagttgagaatgaagaaacacttc |
22894243 |
T |
|
| Q |
670 |
cactagaagtgtttttgaaaactattggatttggatagaaagcatgtccttt |
721 |
Q |
| |
|
|| | |||||||| || |||||||| || |||||||||||||||||| |||| |
|
|
| T |
22894244 |
cattggaagtgttcttcaaaactatagggtttggatagaaagcatgtgcttt |
22894295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 437 - 740
Target Start/End: Original strand, 22880631 - 22880934
Alignment:
| Q |
437 |
atcattgatatcatcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagacca |
536 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||| |||||||||| |
|
|
| T |
22880631 |
atcattgatatcgtcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctaatgtttccagtgttgaaagtgtcaaagagacca |
22880730 |
T |
|
| Q |
537 |
aggtattgacctggtagtgaatctggtagcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaa |
636 |
Q |
| |
|
||||||| || |||||| |||| |||||||||||||||||| |||| ||||||||||| ||||||||||| | || || ||| || | | ||||||| |
|
|
| T |
22880731 |
aggtatttacttggtagcgaatttggtagcccttttgttggtgaaacaacaaaaacaagtccatggccacaagtagctgtatacctagatttgatggcaa |
22880830 |
T |
|
| Q |
637 |
atacaaaagtagttgagaaagaagacacactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttc |
736 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | || |
|
|
| T |
22880831 |
atacaaaagtagttgagaaagaatacacactttcattggaagtgtttttgaaaactataggatttggatagaaagcatatcctttggctctttctgtgtc |
22880930 |
T |
|
| Q |
737 |
attg |
740 |
Q |
| |
|
|||| |
|
|
| T |
22880931 |
attg |
22880934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 74 - 304
Target Start/End: Original strand, 22913375 - 22913605
Alignment:
| Q |
74 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgag |
173 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| | || | | ||||||||||||||| |
|
|
| T |
22913375 |
aggaagttcagagattacaagattttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagttagaattgaacctgttgaagatgag |
22913474 |
T |
|
| Q |
174 |
aatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaacaacatcaattggagctaaagtaa |
273 |
Q |
| |
|
|||||||||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
22913475 |
aatccaacatacatactagtgttaagaattgaagaaagatctttgttcaatgataacaaaggttgttttggtttaacaacattaattggagctaaagtaa |
22913574 |
T |
|
| Q |
274 |
cattaatctttttgttcactccatcatattc |
304 |
Q |
| |
|
||| ||||||||| ||||||||||||||||| |
|
|
| T |
22913575 |
catcaatctttttcttcactccatcatattc |
22913605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 15 - 320
Target Start/End: Original strand, 22893595 - 22893900
Alignment:
| Q |
15 |
aaaggcaacccaacagttaaaaattttgacnnnnnnnnctcatcaaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaa |
114 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| | |||| || || ||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22893595 |
aaaggcaacccaacagttaaaaaatttgatttcgttttctcagctaatactggtaactcaggaagttcagagattacaaggttttgagcttgaccattaa |
22893694 |
T |
|
| Q |
115 |
ccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatc |
214 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | || | | || || | ||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22893695 |
tcttaaaactccaaccaagaatataatgagaagttagaaatgaaccagtagctgatgaaaatccaacatacatactattgttaagaattggagaaagatc |
22893794 |
T |
|
| Q |
215 |
attggtcaatgataacaaaggtcgtgttggtttaacaacatcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccatacc |
314 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||| ||||||||| || | ||||||||||||||||||||| |
|
|
| T |
22893795 |
tttggtcaatgataacaaaggttgttttggtttaacaacattaattggagctaaagtaacatcaatctttttcttttcaccatcatattcaatccatacc |
22893894 |
T |
|
| Q |
315 |
ttcata |
320 |
Q |
| |
|
| |||| |
|
|
| T |
22893895 |
tgcata |
22893900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 58 - 320
Target Start/End: Original strand, 22858144 - 22858418
Alignment:
| Q |
58 |
caaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaa |
157 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| ||| || |
|
|
| T |
22858144 |
caaatattcttagctcaggaagtttagagatttcaaggttttgagcttggccattaaccttaaaactccaaccaagaatataatgggaagctacaattac |
22858243 |
T |
|
| Q |
158 |
ccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaacaac---- |
253 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||| |||||||||||| |
|
|
| T |
22858244 |
cccggttgaagatgagaatccaacatacattctattgttgagaattggagaaagatctttcgtgaatgataacaaaggtcgtgctggtttaacaacatta |
22858343 |
T |
|
| Q |
254 |
--------atcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcata |
320 |
Q |
| |
|
|| |||||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||||| |||| |
|
|
| T |
22858344 |
caaccaaaattaattggagctaatgtaacatcaatatttttcttcactccatcatattctatccatacctgcata |
22858418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 58 - 248
Target Start/End: Original strand, 22885310 - 22885500
Alignment:
| Q |
58 |
caaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaa |
157 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||| ||| ||| |
|
|
| T |
22885310 |
caaatattcttggctcaggaagttcagagatttcaaggttttgagcttggctattaaccttaaaactccaaccaagaatataatgagaagctacaattaa |
22885409 |
T |
|
| Q |
158 |
ccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggttta |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
22885410 |
ccctgttgaagatgagaatccaacatacattctattgttgagtattggagaaagatctttggtcaatgataacaaaggttgtgttggttta |
22885500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 14 - 315
Target Start/End: Original strand, 22880233 - 22880542
Alignment:
| Q |
14 |
caaaggcaacccaacagttaaaaattttgacnnnnnnnnctcatcaaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccatta |
113 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| |||||| | || ||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22880233 |
caaaggtaacccaacagttaaaaattttgactttttttg-tcagcaaatactattggctcatgaagctcagagatttcaaggttttgagcttgaccatta |
22880331 |
T |
|
| Q |
114 |
accttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagat |
213 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||| || ||||| |||||||||||| |||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
22880332 |
accttaaaactccaaccaagaacataatgagaagctaaaattaaccttgttgaagatgataatccaacatacatactattgttgagaattggagaaagat |
22880431 |
T |
|
| Q |
214 |
cattggtcaatgataacaaaggtcgtgttggttt---------aacaacatcaattggagctaaagtaacattaatctttttgttcactccatcatattc |
304 |
Q |
| |
|
| ||||||||||| |||||| ||||||||||||| | ||||| ||| |||||||| ||||| | ||||||||| |||||||||||||| || |
|
|
| T |
22880432 |
ctttggtcaatgacaacaaatgtcgtgttggtttattattaaaaccaacactaatcggagctaatgtaacctcaatctttttcttcactccatcatagtc |
22880531 |
T |
|
| Q |
305 |
aatccatacct |
315 |
Q |
| |
|
||||||||||| |
|
|
| T |
22880532 |
aatccatacct |
22880542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 58 - 313
Target Start/End: Original strand, 22809326 - 22809593
Alignment:
| Q |
58 |
caaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaa |
157 |
Q |
| |
|
||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| | || | |
|
|
| T |
22809326 |
caaatgttcttagctcaggaagtttagagatatcaaggttttgagcttgaccattaaccttaaaactccaaccaagaacataatgagaagatagaataga |
22809425 |
T |
|
| Q |
158 |
ccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaa-------- |
249 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
22809426 |
acctgttgaagatgagaatccaacatacatactagtgttaagaattggagaaagatctttggtgaatgataacaaaggtcgtgttggtttaacaacatta |
22809525 |
T |
|
| Q |
250 |
----caacatcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccatac |
313 |
Q |
| |
|
|||||| |||||||||||||||| ||| ||||||||| || | |||||||||||||||||||| |
|
|
| T |
22809526 |
aaaccaacattaattggagctaaagtagcatcaatctttttcttttcaccatcatattcaatccatac |
22809593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 482 - 722
Target Start/End: Original strand, 22842264 - 22842516
Alignment:
| Q |
482 |
aacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagcccttttgttggagaa |
581 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| || ||| |
|
|
| T |
22842264 |
aacaccaaaaacatggttgctactatttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatttggttgcccttttgtaggtgaa |
22842363 |
T |
|
| Q |
582 |
at----aacaa--aaacaattccatggccaccaagagtt------ggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacacttt |
669 |
Q |
| |
|
| ||||| ||||||| || ||||||| ||||||| |||| | ||| | |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22842364 |
agttgaaacaacaaaacaatcccgtggccactaagagttagttctggatctggagattttatggcaaataaaaaagtagttgagaaagaagacacacttt |
22842463 |
T |
|
| Q |
670 |
cactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttg |
722 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||| |||||| |
|
|
| T |
22842464 |
cactagaagtgtttttgaaaactattggttttggatataaagcatgacctttg |
22842516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 378 - 573
Target Start/End: Original strand, 22858470 - 22858665
Alignment:
| Q |
378 |
tatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtgtcaa |
477 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
22858470 |
tatcctgcaggagttgaattagctgatttcaaattattgatgtcaataccagcatggttattattgatatcatcaaactcaagatcttgaatagtgtcaa |
22858569 |
T |
|
| Q |
478 |
actcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagcccttttg |
573 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||| ||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
22858570 |
gctcaacagcaaacacatggttgctagtgtttccaatgttggaatcgttaaagggaccaaggtattggtttggaagtgaatctggtagcccttttg |
22858665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 18 - 320
Target Start/End: Original strand, 22825903 - 22826205
Alignment:
| Q |
18 |
ggcaacccaacagttaaaaattttgacnnnnnnnnctcatcaaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaacct |
117 |
Q |
| |
|
||||||||||||||||||||||| ||| |||| ||||| || ||| | |||||||||||| ||| |||| ||||||||||||||||||| || |
|
|
| T |
22825903 |
ggcaacccaacagttaaaaatttggactcttttttctcaccaaatcttcgtagtttaggaagttcagaaattacaagattttgagcttgaccattaagct |
22826002 |
T |
|
| Q |
118 |
taaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcatt |
217 |
Q |
| |
|
||||||| ||||||| |||||||||||||| || | | || || | |||||||||||||||||||| |||||||| | |||||||| |||||| | |
|
|
| T |
22826003 |
taaaacttcaaccaagaatataatgagaagtgaaaactgaaccagtagctgatgagaatccaacatacatactattgttcaaaattggaggaagatctct |
22826102 |
T |
|
| Q |
218 |
ggtcaatgataacaaaggtcgtgttggtttaacaacatcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccataccttc |
317 |
Q |
| |
|
||||||||| ||||||||| || ||||||||||||||| |||||||||||||||||||| ||||||||| || | ||||||||||| |||||||||| | |
|
|
| T |
22826103 |
ggtcaatgaaaacaaaggttgttttggtttaacaacattaattggagctaaagtaacatcaatctttttattttcaccatcatattctatccatacctgc |
22826202 |
T |
|
| Q |
318 |
ata |
320 |
Q |
| |
|
||| |
|
|
| T |
22826203 |
ata |
22826205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 371 - 661
Target Start/End: Original strand, 22913669 - 22913959
Alignment:
| Q |
371 |
atcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaaca |
470 |
Q |
| |
|
||||||||||||||| | || || || |||||| |||| ||||||||||||| ||||||||||| |||||||||||||| ||||| || || | |
|
|
| T |
22913669 |
atcataatatcctgccgaagccgatttctctgatttcaaaccattgatatcaattccaacatggttgtcattgatatcatcgaactccgtattcataata |
22913768 |
T |
|
| Q |
471 |
gtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagccctt |
570 |
Q |
| |
|
|| |||| ||| | | ||||||||||||| | ||||||||||||| || | || || |||||||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
22913769 |
gtatcaagctccaaaccaaaaacatggttattgttgtttccattgtttgattcattgaatagaccaaggtattgacttggtagtgaatttggtaaccctt |
22913868 |
T |
|
| Q |
571 |
ttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaaga |
661 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||| | ||| | | || | |||||||||| ||||||||||| ||||||||||| |
|
|
| T |
22913869 |
ttgttggagaaagaacaaaaacaattccatggccactaagattaggaaactcagattttatggcaaaaacaaaagtagtagagaaagaaga |
22913959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 628 - 716
Target Start/End: Original strand, 22858677 - 22858765
Alignment:
| Q |
628 |
ttatggcaaatacaaaagtagttgagaaagaagacacactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgt |
716 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22858677 |
ttatggcaaataaaaaagtagttgagaaagaagacacagtttcactagaagtgtttttgaaaactataggatttggatagaaagcatgt |
22858765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 499
Target Start/End: Original strand, 22922209 - 22922291
Alignment:
| Q |
417 |
atatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggtt |
499 |
Q |
| |
|
||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22922209 |
atatctataccaacatggttatcattaatatcaccaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaagatggtt |
22922291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 413 - 499
Target Start/End: Complemental strand, 22933386 - 22933300
Alignment:
| Q |
413 |
attgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggtt |
499 |
Q |
| |
|
|||||| || |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| |||||||||| |||||| |
|
|
| T |
22933386 |
attgatgtctataccaacatggttatcattaatatcatcaaactcaaagtcttgagcagtgtcaaactcgacagcaaaaatatggtt |
22933300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 22880589 - 22880642
Alignment:
| Q |
368 |
atcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatc |
421 |
Q |
| |
|
|||||||||||||||||||| | ||||||| |||||| ||||||||||||||| |
|
|
| T |
22880589 |
atcatcataatatcctgcagaaattgaatttactgatttcaaatcattgatatc |
22880642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 59 - 715
Target Start/End: Complemental strand, 21151028 - 21150369
Alignment:
| Q |
59 |
aaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaac |
158 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21151028 |
aaatactgttacttcaggaagttcagagatttcaaggttttgagccaggccattaaccttaaaactccaaccaagaatataatgagaagctgcaagtaac |
21150929 |
T |
|
| Q |
159 |
cctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggttt---------aa |
249 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||| || |||||| | |
|
|
| T |
21150928 |
cctgttgaagatgagaatccaacatacatactattgttgagaactggagaaagatctttggtcaatgataacaaaggtcttgctggttttttattaaaac |
21150829 |
T |
|
| Q |
250 |
caacatcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccct |
349 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| || || | |||||||||||||||||||| | |||| | |||| | ||||||| |||| | | |
|
|
| T |
21150828 |
caacactaattggagctaaagtaacattaatcttcttcttttcaccatcatattcaatccatacatgcataggatatccactgaaaagggataaatcatt |
21150729 |
T |
|
| Q |
350 |
cagataaccatcataatcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatca |
449 |
Q |
| |
|
| | ||||||| |||||||| |||| ||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
21150728 |
ga---atccatcattatcatcat---aatagcctgcagaagttgagttagctgatttcaaatcattgatatcaataccaacatggttattattgatatca |
21150635 |
T |
|
| Q |
450 |
tcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctg |
549 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
21150634 |
tcaaactcaaaatcttgaacagtgtcaagctcaacaccaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgtgttg |
21150535 |
T |
|
| Q |
550 |
gtagtgaatctggtagcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagt |
649 |
Q |
| |
|
||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21150534 |
gtagtgaatttggtagctcttttgtaggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtcttatggcaaatacaaaagtagt |
21150435 |
T |
|
| Q |
650 |
tgagaaagaagacacactttcactagaagtgtttttgaaaactattggatttggatagaaagcatg |
715 |
Q |
| |
|
||| |||||| |||||||||| | |||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
21150434 |
tgaaaaagaaaacacactttcgccggaagtgttttcgaaaactataggatttggatagaaagcatg |
21150369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 15628278 - 15628375
Alignment:
| Q |
402 |
gattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggtt |
499 |
Q |
| |
|
|||| |||| ||||||| || |||||||||||||||||||| |||||||||||| |||| ||| ||||||||||| ||||||||||||| |||||| |
|
|
| T |
15628278 |
gatttcaaaccattgatgtctataccaacatggttatcattaatatcatcaaacccaaagtctaagacagtgtcaaattcaacagcaaaaagatggtt |
15628375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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