View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18231_high_3 (Length: 578)

Name: NF18231_high_3
Description: NF18231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18231_high_3
NF18231_high_3
[»] chr8 (34 HSPs)
chr8 (1-561)||(6286308-6286868)
chr8 (237-359)||(20808956-20809078)
chr8 (12-73)||(21695412-21695473)
chr8 (33-73)||(14271899-14271939)
chr8 (33-73)||(21316841-21316881)
chr8 (13-72)||(29380960-29381020)
chr8 (17-72)||(19265864-19265919)
chr8 (13-72)||(24380353-24380412)
chr8 (17-72)||(25481505-25481560)
chr8 (17-72)||(26139830-26139885)
chr8 (38-73)||(29765390-29765425)
chr8 (39-72)||(20400398-20400431)
chr8 (38-75)||(24381322-24381359)
chr8 (8-72)||(12342891-12342955)
chr8 (13-65)||(15176439-15176491)
chr8 (13-73)||(17510942-17511002)
chr8 (28-76)||(18836845-18836893)
chr8 (13-73)||(24908942-24909002)
chr8 (13-73)||(24911163-24911223)
chr8 (33-72)||(6886728-6886767)
chr8 (13-72)||(19705024-19705083)
chr8 (13-72)||(23867829-23867888)
chr8 (33-72)||(28621662-28621701)
chr8 (13-72)||(28858874-28858932)
chr8 (14-72)||(4007151-4007209)
chr8 (40-73)||(18570557-18570590)
chr8 (43-72)||(24389824-24389853)
chr8 (13-70)||(24583173-24583230)
chr8 (33-70)||(26829468-26829505)
chr8 (33-73)||(17100205-17100245)
chr8 (13-73)||(19791431-19791491)
chr8 (40-72)||(24850957-24850989)
chr8 (41-73)||(25227325-25227357)
chr8 (13-69)||(30117661-30117717)
[»] scaffold0060 (2 HSPs)
scaffold0060 (237-343)||(37958-38064)
scaffold0060 (503-532)||(38225-38254)
[»] chr6 (22 HSPs)
chr6 (13-72)||(21687129-21687188)
chr6 (12-72)||(24480061-24480121)
chr6 (13-75)||(1636671-1636733)
chr6 (13-74)||(14727172-14727233)
chr6 (13-65)||(22564556-22564608)
chr6 (13-72)||(19246314-19246373)
chr6 (12-71)||(24469835-24469894)
chr6 (14-73)||(31878847-31878906)
chr6 (13-71)||(23644318-23644376)
chr6 (39-72)||(14076460-14076493)
chr6 (33-73)||(14641690-14641730)
chr6 (33-72)||(8038050-8038089)
chr6 (13-63)||(27961252-27961302)
chr6 (13-62)||(6628984-6629033)
chr6 (39-72)||(14078102-14078135)
chr6 (31-68)||(17822027-17822064)
chr6 (44-77)||(20080782-20080815)
chr6 (44-77)||(24389165-24389198)
chr6 (33-70)||(26820918-26820955)
chr6 (9-72)||(13216304-13216368)
chr6 (33-73)||(17384081-17384121)
chr6 (41-73)||(22569920-22569952)
[»] chr4 (22 HSPs)
chr4 (13-72)||(25025144-25025203)
chr4 (8-73)||(9849706-9849771)
chr4 (13-73)||(17277883-17277943)
chr4 (13-72)||(15166506-15166565)
chr4 (13-71)||(8968072-8968130)
chr4 (38-72)||(19556541-19556575)
chr4 (17-73)||(4617136-4617192)
chr4 (17-73)||(11252128-11252184)
chr4 (33-73)||(17218586-17218626)
chr4 (13-73)||(17434472-17434532)
chr4 (32-72)||(22171805-22171845)
chr4 (13-60)||(16669733-16669780)
chr4 (13-55)||(5691793-5691835)
chr4 (13-71)||(9536756-9536814)
chr4 (15-73)||(19919138-19919196)
chr4 (13-74)||(13588746-13588807)
chr4 (40-73)||(22346144-22346177)
chr4 (13-61)||(10106333-10106381)
chr4 (13-73)||(11782530-11782590)
chr4 (33-73)||(17335354-17335394)
chr4 (40-72)||(19335225-19335257)
chr4 (13-73)||(22350239-22350299)
[»] chr3 (25 HSPs)
chr3 (13-72)||(18535808-18535867)
chr3 (13-74)||(819844-819905)
chr3 (13-73)||(7805780-7805840)
chr3 (13-69)||(8145286-8145342)
chr3 (13-73)||(52935532-52935592)
chr3 (8-73)||(31283902-31283967)
chr3 (13-72)||(12517328-12517387)
chr3 (38-73)||(18735300-18735335)
chr3 (13-72)||(19912618-19912677)
chr3 (33-72)||(20886926-20886965)
chr3 (13-71)||(3429225-3429283)
chr3 (362-424)||(7779677-7779739)
chr3 (11-53)||(13906602-13906644)
chr3 (18-72)||(16242194-16242248)
chr3 (39-72)||(16228344-16228377)
chr3 (13-73)||(13938845-13938905)
chr3 (13-73)||(34276436-34276496)
chr3 (38-73)||(1096760-1096795)
chr3 (40-75)||(20891642-20891677)
chr3 (33-72)||(22470402-22470441)
chr3 (33-75)||(27074010-27074052)
chr3 (33-74)||(27412656-27412697)
chr3 (33-65)||(12771209-12771241)
chr3 (38-66)||(19170117-19170145)
chr3 (40-72)||(19533837-19533869)
[»] scaffold0386 (3 HSPs)
scaffold0386 (13-70)||(4874-4931)
scaffold0386 (1-72)||(13474-13545)
scaffold0386 (16-72)||(9112-9167)
[»] scaffold0043 (1 HSPs)
scaffold0043 (8-73)||(88435-88500)
[»] chr7 (37 HSPs)
chr7 (13-72)||(13280797-13280856)
chr7 (13-70)||(21707339-21707396)
chr7 (33-73)||(19154876-19154916)
chr7 (33-73)||(20754275-20754315)
chr7 (17-72)||(2927916-2927971)
chr7 (13-72)||(3585522-3585581)
chr7 (13-72)||(26249075-26249134)
chr7 (15-72)||(1767416-1767473)
chr7 (33-73)||(2506819-2506859)
chr7 (12-72)||(2565943-2566003)
chr7 (33-73)||(10332462-10332502)
chr7 (8-72)||(10585187-10585251)
chr7 (33-73)||(13252706-13252746)
chr7 (13-69)||(14195786-14195842)
chr7 (13-73)||(18468338-18468398)
chr7 (13-73)||(18986743-18986803)
chr7 (13-73)||(19001371-19001431)
chr7 (33-73)||(19201321-19201361)
chr7 (13-73)||(23127893-23127953)
chr7 (13-72)||(4450709-4450768)
chr7 (38-73)||(9078880-9078915)
chr7 (33-72)||(9767843-9767882)
chr7 (33-72)||(10414279-10414318)
chr7 (33-72)||(23173685-23173724)
chr7 (13-72)||(23897278-23897337)
chr7 (38-72)||(4994790-4994824)
chr7 (13-63)||(8977479-8977529)
chr7 (13-74)||(8052427-8052487)
chr7 (13-74)||(9722479-9722540)
chr7 (13-74)||(11804736-11804797)
chr7 (32-73)||(19201515-19201556)
chr7 (13-65)||(3736374-3736426)
chr7 (8-72)||(6018391-6018455)
chr7 (17-73)||(13287709-13287765)
chr7 (40-72)||(17887730-17887762)
chr7 (41-73)||(20577557-20577589)
chr7 (13-73)||(39270272-39270331)
[»] chr1 (27 HSPs)
chr1 (13-72)||(9782979-9783038)
chr1 (13-72)||(14782568-14782627)
chr1 (13-72)||(21663090-21663149)
chr1 (17-72)||(26611331-26611386)
chr1 (13-73)||(12210303-12210363)
chr1 (13-72)||(15571688-15571747)
chr1 (13-72)||(33192390-33192449)
chr1 (14-72)||(22621832-22621890)
chr1 (40-73)||(26647356-26647389)
chr1 (13-77)||(15542303-15542367)
chr1 (33-73)||(18734584-18734624)
chr1 (17-73)||(25402434-25402490)
chr1 (13-72)||(729174-729233)
chr1 (13-72)||(11845221-11845280)
chr1 (13-72)||(14235284-14235343)
chr1 (17-72)||(22426515-22426570)
chr1 (33-72)||(24464672-24464711)
chr1 (13-72)||(27116223-27116282)
chr1 (38-68)||(22626158-22626188)
chr1 (28-73)||(16114853-16114898)
chr1 (13-74)||(18098246-18098307)
chr1 (33-70)||(26022443-26022480)
chr1 (33-73)||(15158787-15158827)
chr1 (40-72)||(18527496-18527528)
chr1 (33-73)||(18827454-18827494)
chr1 (33-73)||(27912122-27912162)
chr1 (8-72)||(35133917-35133981)
[»] chr5 (18 HSPs)
chr5 (33-75)||(23214822-23214864)
chr5 (8-70)||(24263752-24263814)
chr5 (13-73)||(25572477-25572537)
chr5 (17-73)||(34488899-34488955)
chr5 (13-72)||(23338929-23338988)
chr5 (13-72)||(29987995-29988054)
chr5 (33-73)||(17831751-17831791)
chr5 (33-73)||(24513195-24513235)
chr5 (13-72)||(17469558-17469617)
chr5 (33-72)||(18939578-18939617)
chr5 (17-72)||(20548453-20548508)
chr5 (33-72)||(21352973-21353012)
chr5 (13-71)||(24320522-24320581)
chr5 (38-73)||(31600074-31600109)
chr5 (38-72)||(19761581-19761615)
chr5 (13-73)||(20860377-20860437)
chr5 (33-69)||(24162014-24162050)
chr5 (40-72)||(26315251-26315283)
[»] chr2 (33 HSPs)
chr2 (4-70)||(28766881-28766947)
chr2 (9-74)||(25882568-25882633)
chr2 (13-72)||(16157084-16157143)
chr2 (17-72)||(25537598-25537653)
chr2 (13-72)||(26313216-26313275)
chr2 (38-72)||(29144698-29144732)
chr2 (13-74)||(17891769-17891830)
chr2 (13-73)||(25886190-25886250)
chr2 (33-72)||(21905784-21905823)
chr2 (13-72)||(32130699-32130758)
chr2 (13-72)||(32137912-32137971)
chr2 (13-72)||(32139334-32139393)
chr2 (13-72)||(35680100-35680159)
chr2 (17-71)||(18120546-18120600)
chr2 (19-73)||(25922649-25922703)
chr2 (38-72)||(34574577-34574611)
chr2 (13-70)||(22569092-22569149)
chr2 (4-72)||(18553318-18553386)
chr2 (13-73)||(28918226-28918286)
chr2 (13-73)||(32087086-32087146)
chr2 (13-72)||(45572365-45572425)
chr2 (13-72)||(45576032-45576092)
chr2 (13-72)||(45579699-45579759)
chr2 (13-72)||(45583366-45583426)
chr2 (13-72)||(45587033-45587093)
chr2 (13-72)||(45590700-45590760)
chr2 (13-72)||(45594367-45594427)
chr2 (13-72)||(45598034-45598094)
chr2 (13-72)||(45601701-45601761)
chr2 (13-72)||(45605368-45605428)
chr2 (13-72)||(45609035-45609095)
chr2 (13-72)||(45612702-45612762)
chr2 (13-72)||(45616369-45616429)
[»] scaffold0094 (1 HSPs)
scaffold0094 (13-72)||(12268-12327)
[»] scaffold0258 (1 HSPs)
scaffold0258 (33-72)||(20252-20291)
[»] scaffold0871 (1 HSPs)
scaffold0871 (38-71)||(4021-4054)
[»] scaffold0014 (1 HSPs)
scaffold0014 (39-72)||(192186-192219)
[»] scaffold0056 (1 HSPs)
scaffold0056 (33-73)||(23094-23134)


Alignment Details
Target: chr8 (Bit Score: 537; Significance: 0; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 537; E-Value: 0
Query Start/End: Original strand, 1 - 561
Target Start/End: Original strand, 6286308 - 6286868
Alignment:
Q  1 tactttattggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcactaccgcattaagtctaaggaagttggg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6286308 tactttattggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcactaccgcattaagtctaaggaagttggg 6286407  T
Q  101 atcaccttttgtatgtggttacctggttaaattagctcggtgatttcaaactatgaactctgagtaccagtttagttaaaagagatctatgatgttggaa 200  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6286408 atcaccttttgtatgtggtaacctggttaaattagcttggtgatttcaaactatgaactctgagtaccagtttagttaaaagagatctatgatgttggaa 6286507  T
Q  201 gaatgttggaagcctagcttagatgaaaagagttggatgactatagatatacgttatgtattaagccatcagttgtactaccttgtctattgtatactcg 300  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6286508 gaatgttggaaggctagcttagatgaaaagagttggatgactatagatatacgttatgtattaagccatcagttgtactaccttgtctattgtatactcg 6286607  T
Q  301 ttagtcggtgcactattactcagatatgaattatatttaatgtaatcaccagttagtacattttgtatttagatacgacttatggattgtactcaacaat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6286608 ttagtcggtgcactattactcagatatgaattatatttaatgtaatcgccagttagtacattttgtatttagatacgacttatggattgtactcaacaat 6286707  T
Q  401 taggactttcatcagatttatgaggtagtataatgttatggttcattacatagagaaagttgaattatttcttactttccaaggatgtaagcttaatgtc 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6286708 taggactttcatcagatttatgaggtagtataatgttatggttcattacatagagaaagttgaattatttcttactttccaaggatgtaagcttaaagtc 6286807  T
Q  501 caatattgttccgtgtagggacgatcttatacgaagtatggtaaattttacttcaaataac 561  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6286808 caatattgttccgtgtagggacgatcttatacgaagtatggtaaattttacttcaaataac 6286868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 237 - 359
Target Start/End: Original strand, 20808956 - 20809078
Alignment:
Q  237 atgactatagatatacgttatgtattaagccatcagttgtactaccttgtctattgtatactcgttagtcggtgcactattactcagatatgaattatat 336  Q
    ||||||||| |||||||| || |||| |||||||| |||||||| ||| | | ||| |||||||| |||| ||||||||||||||||||  |||||||||    
T  20808956 atgactataaatatacgtcatatattgagccatcaattgtactatcttatgtgttgcatactcgtcagtcagtgcactattactcagatgggaattatat 20809055  T
Q  337 ttaatgtaatcaccagttagtac 359  Q
    || ||||| ||  ||||||||||    
T  20809056 ttgatgtactcgtcagttagtac 20809078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 21695473 - 21695412
Alignment:
Q  12 caaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||||||||| |||||||  |||| |||||||||||||||||||||||||| |||||||||    
T  21695473 caaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacatgtcatcac 21695412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 14271899 - 14271939
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  14271899 gaaaaacatgctaagaataacgtaagatgacctgtcatcac 14271939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 21316841 - 21316881
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  21316841 gaaaaacatgctaagaataacgtaagatgacctgtcatcac 21316881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 29381020 - 29380960
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||| | ||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  29381020 aaaacctattgaaattgaataaaaaaacatgctaagaataacgtaagatgacctgtcatca 29380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 19265864 - 19265919
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||  |  |||| |||||||||||||||||||||||||||||||||||    
T  19265864 cctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 19265919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 24380412 - 24380353
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| |||||||  |||| |||||||||||||||||||||||||| ||| ||||    
T  24380412 aaaacctactgaaattgagtgaaaaacatgctaagaataacgtaagatgacatgttatca 24380353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 25481560 - 25481505
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||| || | ||  ||||||||||||||||||||||||||||||||||    
T  25481560 cctactaaaattaattgtaaagcatgctaagaataacgtaagatgacctgtcatca 25481505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 26139830 - 26139885
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||  || |||| |||||||||||||||||||||||||||| ||||||    
T  26139830 cctactaaaataaattgaaaaacatgctaagaataacgtaagatgacctttcatca 26139885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 29765425 - 29765390
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  29765425 acatgctaagaataacgtaagatgacctgtcatcac 29765390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 20400398 - 20400431
Alignment:
Q  39 catgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||||||||||||||||||||    
T  20400398 catgctaagaataacgtaagatgacctgtcatca 20400431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 24381359 - 24381322
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatcacta 75  Q
    |||||||||||||||| |||||||||||||||||||||    
T  24381359 acatgctaagaataacttaagatgacctgtcatcacta 24381322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 12342955 - 12342891
Alignment:
Q  8 ttggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| ||||||||||||||| ||  |||| ||| | |||||||||||||||||||| ||||||||    
T  12342955 ttggtaaaacctactaaaatagactgaaaaacaagttaagaataacgtaagatgacatgtcatca 12342891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 15176491 - 15176439
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacct 65  Q
    |||||||||| |||||||  |||| ||||||||||||||| ||||||||||||    
T  15176491 aaaacctactgaaattgactgaaacacatgctaagaataatgtaagatgacct 15176439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 17510942 - 17511002
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| ||| |||  |||| ||||||||||||||| |||||||||||| |||||||    
T  17510942 aaaacctactgaaagtgactgaaaaacatgctaagaataatgtaagatgacctatcatcac 17511002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 18836845 - 18836893
Alignment:
Q  28 tgatagaaagacatgctaagaataacgtaagatgacctgtcatcactac 76  Q
    |||| |||| ||||||||||||||| ||||||||| |||||||||||||    
T  18836845 tgattgaaaaacatgctaagaataatgtaagatgatctgtcatcactac 18836893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 24908942 - 24909002
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||| | |||||||| |||| ||||||||| ||||||||||  ||||||||||||||    
T  24908942 aaaacctattgaaattgattgaaaaacatgctaaaaataacgtaatttgacctgtcatcac 24909002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 24911163 - 24911223
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||| | |||||||| |||| ||||||||| ||||||||||  ||||||||||||||    
T  24911163 aaaacctattgaaattgattgaaaaacatgctaaaaataacgtaatttgacctgtcatcac 24911223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 6886728 - 6886767
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  6886728 gaaaaacatgctaagaataacgtaagatgacttgtcatca 6886767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 19705024 - 19705083
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||  |||| |||| ||||||||||||||||||||| ||||||||    
T  19705024 aaaacctactgaaaatgactgaaaaacatactaagaataacgtaagatgacatgtcatca 19705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 23867888 - 23867829
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||| ||   |||| |||| |||||||| |||||||||||||||||||||    
T  23867888 aaaacctactaaaaatgcctgaaaaacatactaagaattacgtaagatgacctgtcatca 23867829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 28621662 - 28621701
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  28621662 gaaaaacatgctaagaataacgttagatgacctgtcatca 28621701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 28858874 - 28858932
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||| |||  |||| ||||||||||||||| |||||||| ||||||||||    
T  28858874 aaaacctactaaaaatgactgaaa-acatgctaagaataatgtaagatggcctgtcatca 28858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 4007209 - 4007151
Alignment:
Q  14 aaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||| |||  |||| ||||||||| | |||| ||||||||||||||||||    
T  4007209 aaacctactaaaaatgactgaaaaacatgctaatattaacataagatgacctgtcatca 4007151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 18570557 - 18570590
Alignment:
Q  40 atgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||||||||||||||||||||| ||||||||||    
T  18570557 atgctaagaataacgtaagatgatctgtcatcac 18570590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 72
Target Start/End: Original strand, 24389824 - 24389853
Alignment:
Q  43 ctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||||||||||||||||    
T  24389824 ctaagaataacgtaagatgacctgtcatca 24389853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 24583230 - 24583173
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 70  Q
    |||| ||||||||| |||  |||| |||||||||||||||| ||| ||||||||||||    
T  24583230 aaaatctactaaaaatgactgaaaaacatgctaagaataacataaaatgacctgtcat 24583173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 26829505 - 26829468
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcat 70  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  26829505 gaaaaacatgctaagaataacgtaagatgacgtgtcat 26829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 17100245 - 17100205
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||||||||||||||| | |||||||||||||||||    
T  17100245 gaaaaacatgctaagaataacttgagatgacctgtcatcac 17100205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 19791431 - 19791491
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||| |||||| ||  |||| |||||||||  |||||||||||||| ||||||||||    
T  19791431 aaaacctattaaaatagactgaaaaacatgctaattataacgtaagatgatctgtcatcac 19791491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 24850989 - 24850957
Alignment:
Q  40 atgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||| |||||||||||||||||||||||||    
T  24850989 atgctaaaaataacgtaagatgacctgtcatca 24850957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 25227325 - 25227357
Alignment:
Q  41 tgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||| ||||||||||||||||||||    
T  25227325 tgctaagaataatgtaagatgacctgtcatcac 25227357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 30117717 - 30117661
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtca 69  Q
    |||||||||| ||| |||  |||| ||||||||| ||||||||||||| ||||||||    
T  30117717 aaaacctactgaaaatgaatgaaaaacatgctaaaaataacgtaagataacctgtca 30117661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 237 - 343
Target Start/End: Original strand, 37958 - 38064
Alignment:
Q  237 atgactatagatatacgttatgtattaagccatcagttgtactaccttgtctattgtatactcgttagtcggtgcactattactcagatatgaattatat 336  Q
    ||||||||| ||| ||||||| |||| ||||||||||||||||||||| | ||||| |||||||| |||| |||| |||||||||||||  ||||| |||    
T  37958 atgactataaatacacgttatatattgagccatcagttgtactaccttatgtattgcatactcgtcagtcagtgcgctattactcagatgagaattttat 38057  T
Q  337 ttaatgt 343  Q
    || ||||    
T  38058 ttgatgt 38064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Original strand, 38225 - 38254
Alignment:
Q  503 atattgttccgtgtagggacgatcttatac 532  Q
    ||||||||||||||||||||||||||||||    
T  38225 atattgttccgtgtagggacgatcttatac 38254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 9e-16; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 21687188 - 21687129
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  21687188 aaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacatgtcatca 21687129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 24480061 - 24480121
Alignment:
Q  12 caaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||| ||| |||| |||| |||||||||||||||||||||||||||| ||||||    
T  24480061 caaaacctactgaaaatgattgaaatacatgctaagaataacgtaagatgacctatcatca 24480121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 1636671 - 1636733
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcacta 75  Q
    |||||||||||||| | |  |||| ||||||||||||||||||||||||| ||||||||||||    
T  1636671 aaaacctactaaaaataactgaaaaacatgctaagaataacgtaagatgatctgtcatcacta 1636733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 14727172 - 14727233
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 74  Q
    |||||||||||||| |||  |||| ||||| ||| |||||||||||||||||||||||||||    
T  14727172 aaaacctactaaaaatgactgaaaaacatggtaataataacgtaagatgacctgtcatcact 14727233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 22564608 - 22564556
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacct 65  Q
    |||||||||||||| |||  |||| ||||||||||||||||||||||||||||    
T  22564608 aaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacct 22564556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 19246314 - 19246373
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||| ||  |||| ||||||| |||||||||| ||||||||||||||||    
T  19246314 aaaacctactaaaatagactgaaaaacatgcttagaataacgttagatgacctgtcatca 19246373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 24469835 - 24469894
Alignment:
Q  12 caaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 71  Q
    ||||||||||| ||| |||| |||| |||| |||| ||||||||||||||||||||||||    
T  24469835 caaaacctactgaaaatgattgaaaaacatactaaaaataacgtaagatgacctgtcatc 24469894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 31878906 - 31878847
Alignment:
Q  14 aaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||||| ||  |||| ||||||||||||||| |||||||||||| |||||||    
T  31878906 aaacctactaaaatagactgaaaaacatgctaagaataaagtaagatgacctctcatcac 31878847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 23644376 - 23644318
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 71  Q
    ||||||||||||||   || |||| ||||||||||||||||||||||| ||||||||||    
T  23644376 aaaacctactaaaaacaattgaaaaacatgctaagaataacgtaagataacctgtcatc 23644318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 14076460 - 14076493
Alignment:
Q  39 catgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||||||||||||||||||||    
T  14076460 catgctaagaataacgtaagatgacctgtcatca 14076493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 14641690 - 14641730
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  14641690 gaaaaacatgctaagaataacgtaagataacctgtcatcac 14641730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 8038089 - 8038050
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  8038089 gaaaaacaggctaagaataacgtaagatgacctgtcatca 8038050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 27961252 - 27961302
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgac 63  Q
    |||||||||| ||| |||| |||| ||||| ||||||||||||||||||||    
T  27961252 aaaacctactgaaaatgattgaaaaacatgttaagaataacgtaagatgac 27961302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 6629033 - 6628984
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatga 62  Q
    ||||||||||||||| |    |||||||||||||||||||||||||||||    
T  6629033 aaaacctactaaaatagtctaaaagacatgctaagaataacgtaagatga 6628984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 14078102 - 14078135
Alignment:
Q  39 catgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||| |||||||||||||||||||    
T  14078102 catgctaagaataatgtaagatgacctgtcatca 14078135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 17822064 - 17822027
Alignment:
Q  31 tagaaagacatgctaagaataacgtaagatgacctgtc 68  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  17822064 tagaaaaacatgctaagaataacgtaagatgacatgtc 17822027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 20080782 - 20080815
Alignment:
Q  44 taagaataacgtaagatgacctgtcatcactacc 77  Q
    ||||||||||||||||||||||||||||| ||||    
T  20080782 taagaataacgtaagatgacctgtcatcattacc 20080815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 77
Target Start/End: Complemental strand, 24389198 - 24389165
Alignment:
Q  44 taagaataacgtaagatgacctgtcatcactacc 77  Q
    ||||||||||||||||||||||||||||| ||||    
T  24389198 taagaataacgtaagatgacctgtcatcattacc 24389165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 26820918 - 26820955
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcat 70  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  26820918 gaaaaacatgctaagagtaacgtaagatgacctgtcat 26820955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 13216368 - 13216304
Alignment:
Q  9 tggcaaaacctactaaaattgatagaaaga-catgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||| ||||| |||  |||| | |||||||||||||||||||||||| ||| |||||    
T  13216368 tggcaaaacctattaaaaatgactgaaaaaacatgctaagaataacgtaagatgatctgccatca 13216304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 17384081 - 17384121
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||||||||||| ||||||||| ||||||||||    
T  17384081 gaaaaacatgctaagaataatgtaagatgatctgtcatcac 17384121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 22569920 - 22569952
Alignment:
Q  41 tgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||| ||||||||||||||||||||    
T  22569920 tgctaagaataaagtaagatgacctgtcatcac 22569952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 9e-16; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 25025144 - 25025203
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||| |||  |||| |||||||||||||||||||||||||||||||||||    
T  25025144 aaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatca 25025203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 9849771 - 9849706
Alignment:
Q  8 ttggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||||||||||||| |||  |||| |||| |||||||||||||||||||||||||||||||    
T  9849771 ttggtaaaacctactaaaaatgactgaaaaacatactaagaataacgtaagatgacctgtcatcac 9849706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 17277883 - 17277943
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||| ||||||||| ||  |||| |||||||||||||||||||||||||| |||||||||    
T  17277883 aaaacttactaaaatagactgaaaaacatgctaagaataacgtaagatgacatgtcatcac 17277943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 15166506 - 15166565
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||  |||| ||||||||||||||| |||||||||||||||||||    
T  15166506 aaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatca 15166565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 8968130 - 8968072
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 71  Q
    |||||||||| ||| |||  |||| |||||||||||||||||||||||||| |||||||    
T  8968130 aaaacctacttaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatc 8968072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 19556575 - 19556541
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||||||||||||||||||||||||    
T  19556575 acatgctaagaataacgtaagatgacctgtcatca 19556541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 4617136 - 4617192
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||||||| ||  || ||| ||| ||||||||||||||||||||||||||||||||    
T  4617136 cctactaaatttactaaaaaaacaagctaagaataacgtaagatgacctgtcatcac 4617192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 11252184 - 11252128
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||  |  |||| ||||||||| ||||||||||||||||||||||||||    
T  11252184 cctactaaaataaactgaaaaacatgctaaaaataacgtaagatgacctgtcatcac 11252128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 17218586 - 17218626
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  17218586 gaaaaacatgctaagaataacgtaagatgacctatcatcac 17218626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 17434472 - 17434532
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| ||| |||   ||| ||||||||| ||||||||||||||||||||||||||    
T  17434472 aaaacctactgaaaatgacttaaaaacatgctaaaaataacgtaagatgacctgtcatcac 17434532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 22171805 - 22171845
Alignment:
Q  32 agaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  22171805 agaaaaacatgctaagaataatgtaagatgacctgtcatca 22171845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 16669780 - 16669733
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagat 60  Q
    |||||||||| |||||||| |||| |||||||||||||||||| ||||    
T  16669780 aaaacctactgaaattgattgaaaaacatgctaagaataacgtcagat 16669733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 5691793 - 5691835
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgt 55  Q
    ||||||||||||||||||||  || ||||||||||||||||||    
T  5691793 aaaacctactaaaattgataagaaaacatgctaagaataacgt 5691835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 9536814 - 9536756
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 71  Q
    |||||||||| ||| | || |||| |||||||||||||||| ||||| |||||||||||    
T  9536814 aaaacctactgaaaataattgaaaaacatgctaagaataacataagaggacctgtcatc 9536756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 19919196 - 19919138
Alignment:
Q  15 aacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||||  |  |||| |||||||||||||||||| |||||| ||||||||||    
T  19919196 aacctactaaaataaactgaaaaacatgctaagaataacgtcagatgatctgtcatcac 19919138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 13588746 - 13588807
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 74  Q
    |||| ||||| ||| |||| |||| ||||||||| |||||||||||||||  ||||||||||    
T  13588746 aaaatctactgaaaatgattgaaaaacatgctaataataacgtaagatgatttgtcatcact 13588807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 22346144 - 22346177
Alignment:
Q  40 atgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||||||||||||||| |||||||||    
T  22346144 atgctaagaataacgtaagatgacttgtcatcac 22346177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 10106333 - 10106381
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatg 61  Q
    |||||||||| ||| ||| ||||| ||||||||||||||| ||||||||    
T  10106333 aaaacctactgaaaatgacagaaaaacatgctaagaataatgtaagatg 10106381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 11782530 - 11782590
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| ||| |||   ||| ||||| |||||||||||||||||||||| |||||||    
T  11782530 aaaacctacttaaaatgactaaaaaacatgttaagaataacgtaagatgacctatcatcac 11782590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 17335394 - 17335354
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||||| ||||||||||||||||||| |||||||||    
T  17335394 gaaaaacatgccaagaataacgtaagatgacatgtcatcac 17335354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 19335257 - 19335225
Alignment:
Q  40 atgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||||||||| |||||||||    
T  19335257 atgctaagaataacgtaagatgatctgtcatca 19335225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 22350299 - 22350239
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||||||  |  |||| ||||||||||||||| |||||||||  |||||||||    
T  22350299 aaaacctactaaaataaactgaaaaacatgctaagaataatgtaagatgatttgtcatcac 22350239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 9e-16; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 18535808 - 18535867
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  18535808 aaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacttgtcatca 18535867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 819905 - 819844
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 74  Q
    |||||||||| |||||||  |||| |||||||||||||||||||||||||||| ||||||||    
T  819905 aaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacctatcatcact 819844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 7805780 - 7805840
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||| |||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  7805780 aaaacatactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctgtcatcac 7805840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 8145286 - 8145342
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtca 69  Q
    |||||||||| |||||||| |||| ||||||||||||||| ||||||||||||||||    
T  8145286 aaaacctactgaaattgattgaaaaacatgctaagaataatgtaagatgacctgtca 8145342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 52935592 - 52935532
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| ||| |||| |||| |||||||||||||||||||||||||||| |||||||    
T  52935592 aaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctatcatcac 52935532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 31283967 - 31283902
Alignment:
Q  8 ttggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||||||||| ||| |||| |||| ||||| |||||||||||| |||||||||||||||||    
T  31283967 ttggtaaaacctacttaaaatgattgaaaaacatgataagaataacgttagatgacctgtcatcac 31283902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 12517328 - 12517387
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||  |||| | |||||||||||||||||||||||||||||||||    
T  12517328 aaaacctactgaaaatgactgaaaaagatgctaagaataacgtaagatgacctgtcatca 12517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 18735335 - 18735300
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  18735335 acatgctaagaataacgtaagatgacctgtcatcac 18735300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 19912618 - 19912677
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||  |||| | |||||||||||||||||||||||||||||||||    
T  19912618 aaaacctactgaaaatgactgaaaaatatgctaagaataacgtaagatgacctgtcatca 19912677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 20886926 - 20886965
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  20886926 gaaaaacatgctaagaataacgtaagatgacctgtcatca 20886965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 3429283 - 3429225
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 71  Q
    ||||||||||||||| ||  |||| ||||| |||||||||||||||||||| |||||||    
T  3429283 aaaacctactaaaatagaatgaaaaacatgataagaataacgtaagatgacatgtcatc 3429225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 424
Target Start/End: Complemental strand, 7779739 - 7779677
Alignment:
Q  362 tttgtatttagatacgacttatggattgtactcaacaattaggactttcatcagatttatgag 424  Q
    |||||||| | ||||||||||||| ||||||||  || |||||||||||||||||| ||||||    
T  7779739 tttgtattcatatacgacttatggtttgtactcgtcagttaggactttcatcagatgtatgag 7779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 13906644 - 13906602
Alignment:
Q  11 gcaaaacctactaaaattgatagaaagacatgctaagaataac 53  Q
    |||||||||||||||||||| ||||| ||||||||||||||||    
T  13906644 gcaaaacctactaaaattgacagaaaaacatgctaagaataac 13906602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 16242248 - 16242194
Alignment:
Q  18 ctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||| |||  |||| | |||||||||||||||||||||||||||||||||    
T  16242248 ctactaaaaatgagtgaaaaatatgctaagaataacgtaagatgacctgtcatca 16242194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 16228377 - 16228344
Alignment:
Q  39 catgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||||||||||||||||||||    
T  16228377 catgctaagaataacgtaagatgacctgtcatca 16228344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 13938905 - 13938845
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| |||||| |  ||  |||||||||||||||||||| |||||||||||||||    
T  13938905 aaaacctactgaaattgctttaacaacatgctaagaataacgtaaaatgacctgtcatcac 13938845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 34276496 - 34276436
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| ||| |||  |||| | |||||||||||||||||| |||||||||||||||    
T  34276496 aaaacctactgaaaatgactgaaaaatatgctaagaataacgtaaaatgacctgtcatcac 34276436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 1096795 - 1096760
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||| |||||||||||||||||||||||||||||    
T  1096795 acatgcaaagaataacgtaagatgacctgtcatcac 1096760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 20891677 - 20891642
Alignment:
Q  40 atgctaagaataacgtaagatgacctgtcatcacta 75  Q
    ||||||||||||||||||||||||||| ||||||||    
T  20891677 atgctaagaataacgtaagatgacctgccatcacta 20891642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 22470441 - 22470402
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  22470441 gaaaaacatgctaagaataacgtaagatgacatgtcatca 22470402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 27074010 - 27074052
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcacta 75  Q
    |||| ||||||||| |||||||||||||||||| |||||||||    
T  27074010 gaaaaacatgctaaaaataacgtaagatgacctatcatcacta 27074052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 27412697 - 27412656
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcact 74  Q
    |||| ||||||||| |||||||||||||||| ||||||||||    
T  27412697 gaaaaacatgctaaaaataacgtaagatgacttgtcatcact 27412656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 12771241 - 12771209
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacct 65  Q
    |||| ||||||||||||||||||||||||||||    
T  12771241 gaaaaacatgctaagaataacgtaagatgacct 12771209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 38 - 66
Target Start/End: Original strand, 19170117 - 19170145
Alignment:
Q  38 acatgctaagaataacgtaagatgacctg 66  Q
    |||||||||||||||||||||||||||||    
T  19170117 acatgctaagaataacgtaagatgacctg 19170145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 72
Target Start/End: Original strand, 19533837 - 19533869
Alignment:
Q  40 atgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||||||||| |||||||||    
T  19533837 atgctaagaataacgtaagatgatctgtcatca 19533869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 4931 - 4874
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 70  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||    
T  4931 aaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacttgtcat 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13545 - 13474
Alignment:
Q  1 tactttattggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||| |||| ||||||||||||||||||| |||| ||||||||||||||  |||||||||| ||| ||||    
T  13545 tactttgttggtaaaacctactaaaattgattgaaaaacatgctaagaatattgtaagatgacttgtaatca 13474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 9167 - 9112
Alignment:
Q  16 acctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||||  |||| | | |||||||||||||||||||||| ||||||||    
T  9167 acctactaaaattgactgaaaaata-gctaagaataacgtaagatgacttgtcatca 9112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 88500 - 88435
Alignment:
Q  8 ttggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||||||||| ||| |||| |||| |||||||||||||||||||||||||| |||||||||    
T  88500 ttggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacatgtcatcac 88435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 13280797 - 13280856
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||||| || |||| |||||||||||||||||||||||||| ||||||||    
T  13280797 aaaacctactgaaattaattgaaaaacatgctaagaataacgtaagatgacatgtcatca 13280856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 21707396 - 21707339
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 70  Q
    |||||||||||||| |||| |||| | |||||||||||||||||||||||| ||||||    
T  21707396 aaaacctactaaaaatgattgaaaaatatgctaagaataacgtaagatgacgtgtcat 21707339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 19154876 - 19154916
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  19154876 gaaaaacatgctaagaataacgtaagatgacctgtcatcac 19154916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 20754275 - 20754315
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  20754275 gaaaaacatgctaagaataacgtaagatgacctgtcatcac 20754315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 2927916 - 2927971
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||  |  |||| |||||||||||||||||||||||||||||||||||    
T  2927916 cctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 2927971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 3585581 - 3585522
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||| |||| ||||||||||||||| |||||||||| ||||||||    
T  3585581 aaaacctactgaaaatgattgaaaaacatgctaagaataatgtaagatgacttgtcatca 3585522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 26249134 - 26249075
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||  |||| |||||||| ||||||||||||||||||||||||||    
T  26249134 aaaacctactgaaaatgactgaaaaacatgctatgaataacgtaagatgacctgtcatca 26249075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 1767416 - 1767473
Alignment:
Q  15 aacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||| |||||| ||  |||| | |||||||||||||||||||||||||||||||||    
T  1767416 aacctattaaaatagactgaaaaatatgctaagaataacgtaagatgacctgtcatca 1767473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 2506859 - 2506819
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  2506859 gaaaaacatgctgagaataacgtaagatgacctgtcatcac 2506819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 2565943 - 2566003
Alignment:
Q  12 caaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||| ||| |||  |||| |||||||||||||| ||||||||||| ||||||||    
T  2565943 caaaacctactgaaaatgactgaaaaacatgctaagaatatcgtaagatgacttgtcatca 2566003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 10332462 - 10332502
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||||||||||||||||||||||||| |||||||||    
T  10332462 gaaaaacatgctaagaataacgtaagatgacatgtcatcac 10332502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 10585251 - 10585187
Alignment:
Q  8 ttggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||  | | ||| | |||||||||||| ||||||||||||||||||||    
T  10585251 ttggtaaaacctactaaaataaacataaaaatatgctaagaatagcgtaagatgacctgtcatca 10585187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 13252746 - 13252706
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  13252746 gaaaaacatgctaagaataacgtaagatgacctgccatcac 13252706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 14195786 - 14195842
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtca 69  Q
    |||||||||||||| |||  |||| |||||||||||||||| |||||| ||||||||    
T  14195786 aaaacctactaaaaatgactgaaaaacatgctaagaataacataagatcacctgtca 14195842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 18468398 - 18468338
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||| ||||||||||||  |||| ||||| |||||||||||||||||| ||||| |||||    
T  18468398 aaaacttactaaaattgactgaaaaacatgttaagaataacgtaagatggcctgtaatcac 18468338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 18986803 - 18986743
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||| |||||||  |||| |||||||||||||||||||||||||  |||||||||    
T  18986803 aaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatgatatgtcatcac 18986743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 19001431 - 19001371
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||| |||||||  |||| |||||||||||||||||||||||||  |||||||||    
T  19001431 aaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatgatatgtcatcac 19001371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 19201361 - 19201321
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||||||||||||||||||||| ||||||||||    
T  19201361 gaaaaacatgctaagaataacgtaagatgatctgtcatcac 19201321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 23127953 - 23127893
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||||||||||||| ||  |||| | ||||||| |||||||||||||||||| |||||||    
T  23127953 aaaacctactaaaatagactgaaatatatgctaaaaataacgtaagatgacctatcatcac 23127893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 4450709 - 4450768
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||  | || ||||||||||||||||||||||||| |||||||||    
T  4450709 aaaacctactgaaaatgactggaaaacatgctaagaataacgtaagatgatctgtcatca 4450768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 9078915 - 9078880
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||||||||||||||||| |||||||||    
T  9078915 acatgctaagaataacgtaagatgacatgtcatcac 9078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 9767843 - 9767882
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  9767843 gaaaaacatgctaagaataacgtgagatgacctgtcatca 9767882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 10414318 - 10414279
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  10414318 gaaaaacatgctaagaataatgtaagatgacctgtcatca 10414279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 23173724 - 23173685
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  23173724 gaaaaacatgctaagaataacgtaagatgacatgtcatca 23173685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 23897278 - 23897337
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||| ||||||||||||  |||| ||||| ||||||||| |||||||||| ||||||||    
T  23897278 aaaacatactaaaattgactgaaaaacatgttaagaataatgtaagatgacatgtcatca 23897337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 4994790 - 4994824
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||| |||||||||||||||||||||||||    
T  4994790 acatgctaaaaataacgtaagatgacctgtcatca 4994824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 8977529 - 8977479
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgac 63  Q
    |||||||||| ||| |||| |||| | ||||||||||||||||||||||||    
T  8977529 aaaacctactgaaaatgattgaaaaagatgctaagaataacgtaagatgac 8977479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 8052487 - 8052427
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 74  Q
    |||||||||| ||| |||  |||| |||||||||||||||||||||||||  ||||||||||    
T  8052487 aaaacctactgaaaatgactgaaa-acatgctaagaataacgtaagatgatttgtcatcact 8052427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 9722479 - 9722540
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 74  Q
    |||| ||||| ||| |||| |||| ||||||||| |||||||||||||||  ||||||||||    
T  9722479 aaaatctactgaaaatgattgaaaaacatgctaataataacgtaagatgatttgtcatcact 9722540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 11804736 - 11804797
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 74  Q
    |||||||||| ||| |||  |||| ||||| || |||||||||||||||| |||||||||||    
T  11804736 aaaacctactgaaaatgactgaaaaacatgttatgaataacgtaagatgatctgtcatcact 11804797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 19201515 - 19201556
Alignment:
Q  32 agaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||| ||||| |||||||||| |||||||||||||||||||    
T  19201515 agaaaaacatgttaagaataacataagatgacctgtcatcac 19201556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 3736374 - 3736426
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacct 65  Q
    |||||||||| |||| ||   ||| ||||||||||||||||||||||||||||    
T  3736374 aaaacctactgaaatagactaaaaaacatgctaagaataacgtaagatgacct 3736426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 6018391 - 6018455
Alignment:
Q  8 ttggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| ||||||||||||||| ||  |||| ||||||||| |||||| ||||||||| | ||||||    
T  6018391 ttggtaaaacctactaaaatcgactgaaaaacatgctaaaaataacataagatgacatatcatca 6018455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 13287765 - 13287709
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||  |  |||| ||||| |||||||||||||||||||| |||||||||    
T  13287765 cctactaaaataaactgaaaaacatgttaagaataacgtaagatgacttgtcatcac 13287709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 17887762 - 17887730
Alignment:
Q  40 atgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||| |||||||||||||||    
T  17887762 atgctaagaataacgtaggatgacctgtcatca 17887730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 20577557 - 20577589
Alignment:
Q  41 tgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||||||||||||||||||||| |||||||||    
T  20577557 tgctaagaataacgtaagatgacatgtcatcac 20577589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 39270331 - 39270272
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||| |||||||| |||  |||| ||||||||||| |||||||||||||| |||||||||    
T  39270331 aaaacttactaaaaatgactgaaaaacatgctaaga-taacgtaagatgacatgtcatcac 39270272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 9783038 - 9782979
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||| ||| |||| ||||||||| ||||||||||||||| |||||||||    
T  9783038 aaaacctactaaaatagattgaaaaacatgctaataataacgtaagatgatctgtcatca 9782979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 14782568 - 14782627
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||| | |||||||  |||| |||||||||||||||||||||||||||||||||||    
T  14782568 aaaacctattgaaattgagtgaaaaacatgctaagaataacgtaagatgacctgtcatca 14782627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 21663149 - 21663090
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||  |||| |||||||||||||||||||||||||||||||||||    
T  21663149 aaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatca 21663090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 26611386 - 26611331
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||| ||| || |||| |||||||||||||||||||||||||||||||||||    
T  26611386 cctactaatattaattgaaaaacatgctaagaataacgtaagatgacctgtcatca 26611331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 12210303 - 12210363
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| |||||||  |||| ||||||||||||||| |||||||||||| |||||||    
T  12210303 aaaacctactgaaattgactgaaaaacatgctaagaataatgtaagatgacctatcatcac 12210363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 15571747 - 15571688
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||||  |||| ||||||||| ||||||||||||||| || ||||||    
T  15571747 aaaacctactaaaattgactgaaaaacatgctaaaaataacgtaagatgatctatcatca 15571688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 33192390 - 33192449
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| |||||||  |||| |||||||||||||| ||||||||||| ||||||||    
T  33192390 aaaacctactgaaattgactgaaaaacatgctaagaatagcgtaagatgacttgtcatca 33192449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 22621832 - 22621890
Alignment:
Q  14 aaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||| |||  |||| ||||||||||||| ||||||||| |||||||||||    
T  22621832 aaacctactaaaaatgactgaaaaacatgctaagaattacgtaagataacctgtcatca 22621890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 26647389 - 26647356
Alignment:
Q  40 atgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||||||||||||||||||||||||||||||||    
T  26647389 atgctaagaataacgtaagatgacctgtcatcac 26647356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 15542367 - 15542303
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcactacc 77  Q
    |||||||||| ||| |||  |||| ||||| |||||||||||||||||||| |||||||| ||||    
T  15542367 aaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatcattacc 15542303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 18734624 - 18734584
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  18734624 gaaaaacatgctaagaataacgtaagataacctgtcatcac 18734584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 25402490 - 25402434
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||  |  |||| ||||||||||||||||| ||||||||||||||||||    
T  25402490 cctactaaaataaactgaaaaacatgctaagaataacgcaagatgacctgtcatcac 25402434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 729174 - 729233
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||  ||||  ||||||||||||||||||||||||||| ||||||    
T  729174 aaaacctactgaaaatgactgaaaagcatgctaagaataacgtaagatgacctttcatca 729233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 11845280 - 11845221
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||| | |  |||| | ||||||||||||||||||||||| |||||||||    
T  11845280 aaaacctactaaaaataactgaaaaatatgctaagaataacgtaagatgatctgtcatca 11845221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 14235343 - 14235284
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||| |||  |||| ||||||||||| |||||||||||||| || |||||    
T  14235343 aaaacctactaaaaatgactgaaaaacatgctaagagtaacgtaagatgacatgccatca 14235284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 22426570 - 22426515
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||  |  |||| ||||||||||||| |||||||||||||||||||||    
T  22426570 cctactaaaataaactgaaaaacatgctaagaatgacgtaagatgacctgtcatca 22426515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 24464672 - 24464711
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  24464672 gaaaaacatgctaagaataacgtaagatgacatgtcatca 24464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 27116282 - 27116223
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||| |||| |||| ||||| |||||| ||||||||||||| | ||||||    
T  27116282 aaaacctactaaaaatgattgaaaaacatgttaagaaaaacgtaagatgacatttcatca 27116223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 22626188 - 22626158
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtc 68  Q
    |||||||||||||||||||||||||||||||    
T  22626188 acatgctaagaataacgtaagatgacctgtc 22626158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 16114853 - 16114898
Alignment:
Q  28 tgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||| ||||||||||||||||||||||| | ||||||||||    
T  16114853 tgattgaaaaacatgctaagaataacgtaagataatctgtcatcac 16114898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 18098307 - 18098246
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 74  Q
    ||||||||||||| | ||| |||| |||  |||| ||||||||||||| |||||||||||||    
T  18098307 aaaacctactaaattagattgaaaaacagtctaaaaataacgtaagataacctgtcatcact 18098246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 26022443 - 26022480
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcat 70  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  26022443 gaaaaacatgctaagaataacgtaagatcacctgtcat 26022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 15158827 - 15158787
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||||||||||||||||||  ||||||||||||||    
T  15158827 gaaaaacatgctaagaataacgtaatttgacctgtcatcac 15158787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 18527528 - 18527496
Alignment:
Q  40 atgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||||||||||||| ||||||||    
T  18527528 atgctaagaataacgtaagatgacttgtcatca 18527496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 18827454 - 18827494
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||| ||||||||||||||||||||| ||||||||    
T  18827454 gaaaaacatgttaagaataacgtaagatgaccagtcatcac 18827494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 27912122 - 27912162
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  27912122 gaaaaacatgttaagaataacgtaagatgacatgtcatcac 27912162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 35133917 - 35133981
Alignment:
Q  8 ttggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| ||||||||||||||  ||  |||| ||||||||   ||||||||||||||||||||||||    
T  35133917 ttggtaaaacctactaaaaaagactgaaaaacatgctacagataacgtaagatgacctgtcatca 35133981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 23214864 - 23214822
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcacta 75  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  23214864 gaaaaacatgctaagaataacgtaagatgacctgtcatcacta 23214822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 24263814 - 24263752
Alignment:
Q  8 ttggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 70  Q
    |||| ||||||||||||||| ||  |||| |||||||||||||||||||||||||||| ||||    
T  24263814 ttggtaaaacctactaaaatagactgaaaaacatgctaagaataacgtaagatgacctatcat 24263752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 25572537 - 25572477
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| |||||||  |||| ||||||||||||||||||| |||||| |||||||||    
T  25572537 aaaacctactgaaattgactgaaaaacatgctaagaataacgtaggatgacttgtcatcac 25572477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 34488899 - 34488955
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||||||| ||||||    
T  34488899 cctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctgccatcac 34488955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 23338929 - 23338988
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||| | ||| |||| |||| |||||||||||||||| ||||||||||||||||||    
T  23338929 aaaacctaatgaaaatgattgaaaaacatgctaagaataacctaagatgacctgtcatca 23338988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 29987995 - 29988054
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| ||||||||| |||  |||| ||||||||| |||||||||||||||||||||||||    
T  29987995 aaaatctactaaaaatgactgaaaaacatgctaaaaataacgtaagatgacctgtcatca 29988054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 17831751 - 17831791
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||||||||||||||||||||||||| |||||||||    
T  17831751 gaaaaacatgctaagaataacgtaagatgacatgtcatcac 17831791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 24513235 - 24513195
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  24513235 gaaaaacatgctaagaataacgtaagatgacctgtaatcac 24513195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 17469617 - 17469558
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||| || ||| |||| |||| ||||||||||||||||||||||||  |||||||||    
T  17469617 aaaacctgctgaaaatgattgaaaaacatgctaagaataacgtaagatggtctgtcatca 17469558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 18939578 - 18939617
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  18939578 gaaaaacatgttaagaataacgtaagatgacctgtcatca 18939617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 20548508 - 20548453
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||  |  |||| |||||||| ||||||||||||||||||||||||||    
T  20548508 cctactaaaataaactgaaaaacatgctaggaataacgtaagatgacctgtcatca 20548453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 21352973 - 21353012
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  21352973 gaaaaacatgctaagaataacataagatgacctgtcatca 21353012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 24320581 - 24320522
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatc 71  Q
    |||||||||| ||| ||| || ||| ||||| ||||||||||||||||||||||||||||    
T  24320581 aaaacctactgaaaatgaataaaaaaacatgttaagaataacgtaagatgacctgtcatc 24320522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 31600109 - 31600074
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||||||||||||||| |||||||||||||    
T  31600109 acatgctaagaataacgtaagaggacctgtcatcac 31600074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 19761615 - 19761581
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||| |||||||||||||||||||||||||    
T  19761615 acatgctaataataacgtaagatgacctgtcatca 19761581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 20860377 - 20860437
Alignment:
Q  13 aaaacctact-aaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| |||||| || |||| ||||||||| | ||||||||||||||||||||||||    
T  20860377 aaaacctactgaaaattaat-gaaaaacatgctaacagtaacgtaagatgacctgtcatcac 20860437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 24162050 - 24162014
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtca 69  Q
    |||| |||||||||||||||||||| |||||||||||    
T  24162050 gaaaaacatgctaagaataacgtaaaatgacctgtca 24162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 72
Target Start/End: Original strand, 26315251 - 26315283
Alignment:
Q  40 atgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||||||||||||| ||||||||    
T  26315251 atgctaagaataacgtaagatgacatgtcatca 26315283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 28766881 - 28766947
Alignment:
Q  4 tttattggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 70  Q
    ||||| || |||||||||||||||  || |||| ||||| |||||||||||||||||||||||||||    
T  28766881 tttatgggtaaaacctactaaaatatattgaaaaacatgttaagaataacgtaagatgacctgtcat 28766947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25882633 - 25882568
Alignment:
Q  9 tggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 74  Q
    ||||||||||||||||||||||  |||| ||||||||| ||||||||||||||  ||||| |||||    
T  25882633 tggcaaaacctactaaaattgactgaaaaacatgctaaaaataacgtaagatggtctgtcttcact 25882568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 16157143 - 16157084
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||  |||| ||||||||||||||| |||||||||||||||||||    
T  16157143 aaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatca 16157084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 25537598 - 25537653
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||  |  |||| |||||||||||||||||||||||||||||||||||    
T  25537598 cctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 25537653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 26313216 - 26313275
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||||||||  ||| ||||||||||||||| |||||||||| ||||||||    
T  26313216 aaaacctactgaaattgattaaaaaacatgctaagaataatgtaagatgacttgtcatca 26313275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 29144698 - 29144732
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||||||||||||||||||||||||    
T  29144698 acatgctaagaataacgtaagatgacctgtcatca 29144732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 17891769 - 17891830
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 74  Q
    |||||||||| ||| |||  |||| ||||| |||||||||||||||||||| ||||||||||    
T  17891769 aaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatcact 17891830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 25886250 - 25886190
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||| | ||| ||| ||||| ||||| ||| ||||||||||||||||||||||||||    
T  25886250 aaaacctaatgaaaatgacagaaaaacatgataaaaataacgtaagatgacctgtcatcac 25886190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 21905784 - 21905823
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  21905784 gaaaaacatgctaagaataacataagatgacctgtcatca 21905823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 32130758 - 32130699
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||| |||||||| |||  || | |||| ||||||||||||||||||||||||||||||    
T  32130758 aaaacttactaaaaatgactgataaacatactaagaataacgtaagatgacctgtcatca 32130699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 32137971 - 32137912
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||| |||  || | ||||  |||||||||||||||||||||||||||||    
T  32137971 aaaacctactaaaaatgactgataaacataataagaataacgtaagatgacctgtcatca 32137912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 32139393 - 32139334
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||| |||||| |||  || | |||| ||||||||||||||||||||||||||||||    
T  32139393 aaaacctgctaaaaatgactgataaacatactaagaataacgtaagatgacctgtcatca 32139334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 35680159 - 35680100
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||| ||| |||   ||| |||||||||||||||||||||||| ||||||||||    
T  35680159 aaaacctactgaaaatgacttaaaaacatgctaagaataacgtaagatggcctgtcatca 35680100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 18120600 - 18120546
Alignment:
Q  17 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 71  Q
    |||||||||||  |  |||| |||||||||||||||||||||||||| |||||||    
T  18120600 cctactaaaataaactgaaaaacatgctaagaataacgtaagatgacatgtcatc 18120546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 25922649 - 25922703
Alignment:
Q  19 tactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||  || |||| ||||||||| ||||||||||||| ||||||||||||    
T  25922649 tactaaaataaattgaaaaacatgctaaaaataacgtaagataacctgtcatcac 25922703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 34574577 - 34574611
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  34574577 acatgctaagaataacgtaagatgacctgtaatca 34574611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 22569092 - 22569149
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 70  Q
    |||||||||| |||||||  |||| ||||| |||||||||| ||||||||||| ||||    
T  22569092 aaaacctactgaaattgactgaaaaacatggtaagaataacataagatgacctttcat 22569149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 18553318 - 18553386
Alignment:
Q  4 tttattggcaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| ||| |||||||| |||||| | | |||| |||||||| |||||| |||||||||||||| ||||    
T  18553318 tttactggtaaaacctattaaaataggttgaaaaacatgctaggaataatgtaagatgacctgtaatca 18553386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 28918226 - 28918286
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||||||||| ||| |||  |||| |||||||||||||||||||| ||||  |||||||||    
T  28918226 aaaacctactgaaaatgactgaaaaacatgctaagaataacgtaaaatgatttgtcatcac 28918286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 32087086 - 32087146
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    ||||||||||||||| ||   ||| | ||||||| |||||||||||||||| |||||||||    
T  32087086 aaaacctactaaaatagactaaaaaatatgctaataataacgtaagatgacatgtcatcac 32087146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45572425 - 45572365
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45572425 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45572365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45576092 - 45576032
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45576092 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45576032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45579759 - 45579699
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45579759 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45579699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45583426 - 45583366
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45583426 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45583366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45587093 - 45587033
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45587093 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45587033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45590760 - 45590700
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45590760 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45590700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45594427 - 45594367
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45594427 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45594367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45598094 - 45598034
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45598094 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45598034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45601761 - 45601701
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45601761 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45601701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45605428 - 45605368
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45605428 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45605368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45609095 - 45609035
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45609095 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45609035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45612762 - 45612702
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45612762 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45612702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 45616429 - 45616369
Alignment:
Q  13 aaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45616429 aaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45616369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 12268 - 12327
Alignment:
Q  13 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    ||||||||||||||||||| |||| |||||||||||||||||  ||||||  ||||||||    
T  12268 aaaacctactaaaattgattgaaaaacatgctaagaataacgctagatgaaatgtcatca 12327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 20291 - 20252
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatca 72  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  20291 gaaaaacatgctaagaataacgtaagatgacttgtcatca 20252  T

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Target: scaffold0871 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 4021 - 4054
Alignment:
Q  38 acatgctaagaataacgtaagatgacctgtcatc 71  Q
    |||||||||||||||||||||| |||||||||||    
T  4021 acatgctaagaataacgtaagaggacctgtcatc 4054  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 192186 - 192219
Alignment:
Q  39 catgctaagaataacgtaagatgacctgtcatca 72  Q
    |||||||| |||||||||||||||||||||||||    
T  192186 catgctaaaaataacgtaagatgacctgtcatca 192219  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 23094 - 23134
Alignment:
Q  33 gaaagacatgctaagaataacgtaagatgacctgtcatcac 73  Q
    |||| |||||||||||||| | |||||||||||||||||||    
T  23094 gaaatacatgctaagaatagcataagatgacctgtcatcac 23134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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