View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18231_high_8 (Length: 342)
Name: NF18231_high_8
Description: NF18231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18231_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 30737594 - 30737934
Alignment:
| Q |
1 |
aagcataataagtcatgtctgtgaagatccttcactcagatatcagattcctccacttcagcatagagaaagactctatttaagtgtgtcaaatttgcat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| ||| |
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| T |
30737594 |
aagcataataagtcatgtctgtgaagatccttcactcatatatcagactcgtccacttcagcatagagaaagcctctatttaagtgtgtcaaatttacat |
30737693 |
T |
|
| Q |
101 |
caagaaataccttcttgataaatgcacaaacttgttgagattactacgtactcaatacaaaggaaaaatttccttttcaaaataaaaaaccctacaaaat |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
30737694 |
caagaaataccttcttgataaatgcagaaacttgttgagattactacgtactcaatacaaaggaaaaatttcctcttcaaaataaaaaaccctacaaaat |
30737793 |
T |
|
| Q |
201 |
ttgtaggtactactccttccaatatggaaactctggttacatttcgagcctgatcctctcttgttataataacctggataaaatgatctttgaaaatcca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30737794 |
ttgtaggtactactccttccaatatggaaactctggttacatttcgagcctgatcctctcttgttataataacctggataaaatgatctttgaaaatcca |
30737893 |
T |
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| Q |
301 |
cttcttcaattaacttcaatcccacatattcttcgacatcc |
341 |
Q |
| |
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||||||||||||||||||||||||||| |||| ||| |||| |
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| T |
30737894 |
cttcttcaattaacttcaatcccacattttctgcgagatcc |
30737934 |
T |
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