View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18234_high_25 (Length: 250)

Name: NF18234_high_25
Description: NF18234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18234_high_25
NF18234_high_25
[»] chr8 (46 HSPs)
chr8 (61-234)||(32805914-32806087)
chr8 (6-60)||(10117049-10117103)
chr8 (10-60)||(11335646-11335696)
chr8 (3-61)||(44521326-44521384)
chr8 (4-60)||(45045456-45045512)
chr8 (3-61)||(33385249-33385307)
chr8 (9-63)||(40640354-40640408)
chr8 (5-57)||(2296556-2296608)
chr8 (5-60)||(9015895-9015950)
chr8 (6-45)||(40640285-40640324)
chr8 (6-60)||(7258664-7258718)
chr8 (8-58)||(11335576-11335626)
chr8 (6-60)||(13290042-13290096)
chr8 (6-60)||(24287792-24287846)
chr8 (3-61)||(31406294-31406352)
chr8 (6-56)||(41753841-41753891)
chr8 (3-60)||(2296478-2296535)
chr8 (4-57)||(3444627-3444680)
chr8 (6-63)||(33070172-33070229)
chr8 (6-63)||(34326321-34326378)
chr8 (11-60)||(34580651-34580700)
chr8 (8-60)||(2805892-2805944)
chr8 (8-60)||(29360827-29360879)
chr8 (14-58)||(34326260-34326304)
chr8 (6-58)||(36916664-36916716)
chr8 (6-58)||(41387843-41387895)
chr8 (8-58)||(7428901-7428951)
chr8 (10-60)||(29360759-29360809)
chr8 (6-60)||(33070244-33070298)
chr8 (7-60)||(5888415-5888468)
chr8 (13-58)||(8506298-8506343)
chr8 (6-63)||(10934610-10934667)
chr8 (6-51)||(13496523-13496568)
chr8 (6-63)||(13841855-13841912)
chr8 (31-60)||(20524198-20524227)
chr8 (6-63)||(23627673-23627730)
chr8 (13-58)||(29424064-29424109)
chr8 (3-63)||(92762-92822)
chr8 (6-58)||(1739646-1739698)
chr8 (6-58)||(2382593-2382645)
chr8 (8-48)||(3385569-3385609)
chr8 (6-58)||(6197907-6197959)
chr8 (6-58)||(14700322-14700374)
chr8 (12-60)||(18603471-18603519)
chr8 (6-58)||(24053604-24053656)
chr8 (15-47)||(29423999-29424031)
[»] chr6 (29 HSPs)
chr6 (61-234)||(6094830-6095003)
chr6 (6-63)||(33689236-33689293)
chr6 (6-60)||(8449655-8449709)
chr6 (6-60)||(8458459-8458513)
chr6 (6-60)||(11637177-11637231)
chr6 (6-60)||(13281541-13281595)
chr6 (6-60)||(18886387-18886441)
chr6 (6-61)||(12383865-12383920)
chr6 (3-58)||(32254902-32254957)
chr6 (3-57)||(14031751-14031805)
chr6 (5-58)||(6032972-6033025)
chr6 (6-51)||(31398314-31398359)
chr6 (4-60)||(3199797-3199853)
chr6 (3-58)||(8449578-8449633)
chr6 (3-58)||(8458382-8458437)
chr6 (6-45)||(18886315-18886354)
chr6 (3-58)||(21998043-21998098)
chr6 (6-60)||(11746307-11746361)
chr6 (6-60)||(13506841-13506895)
chr6 (6-60)||(31996506-31996560)
chr6 (13-58)||(8030396-8030441)
chr6 (13-58)||(13277103-13277148)
chr6 (6-43)||(18097067-18097104)
chr6 (6-43)||(29215539-29215576)
chr6 (6-63)||(29418941-29418998)
chr6 (7-43)||(5571529-5571565)
chr6 (6-58)||(14310602-14310654)
chr6 (6-58)||(26527271-26527323)
chr6 (3-51)||(30916958-30917006)
[»] chr5 (44 HSPs)
chr5 (6-63)||(14772622-14772679)
chr5 (6-60)||(33075072-33075126)
chr5 (6-60)||(71266-71320)
chr5 (3-61)||(31691337-31691395)
chr5 (8-51)||(26045274-26045317)
chr5 (10-60)||(5984062-5984112)
chr5 (6-60)||(7329989-7330043)
chr5 (3-61)||(32398081-32398139)
chr5 (6-63)||(1098703-1098760)
chr5 (3-60)||(3100484-3100541)
chr5 (4-57)||(41814388-41814441)
chr5 (6-58)||(2974547-2974599)
chr5 (12-60)||(35032349-35032397)
chr5 (6-61)||(15549403-15549458)
chr5 (9-60)||(30371412-30371463)
chr5 (5-63)||(3100411-3100469)
chr5 (6-60)||(10437645-10437699)
chr5 (3-61)||(31706037-31706095)
chr5 (6-60)||(35729440-35729494)
chr5 (6-51)||(26141762-26141807)
chr5 (6-47)||(38154569-38154610)
chr5 (6-58)||(37944683-37944735)
chr5 (6-57)||(19868929-19868980)
chr5 (6-60)||(11795743-11795797)
chr5 (3-45)||(34867555-34867597)
chr5 (25-63)||(37554423-37554461)
chr5 (25-63)||(37685046-37685084)
chr5 (3-45)||(43117390-43117432)
chr5 (3-45)||(43438349-43438391)
chr5 (13-58)||(25408557-25408602)
chr5 (13-58)||(25408624-25408669)
chr5 (12-60)||(8681698-8681746)
chr5 (30-58)||(14642097-14642125)
chr5 (6-58)||(17967396-17967448)
chr5 (6-58)||(18261607-18261659)
chr5 (10-50)||(25037142-25037182)
chr5 (4-60)||(25941748-25941804)
chr5 (6-58)||(26300118-26300170)
chr5 (6-50)||(29177800-29177844)
chr5 (3-63)||(29486502-29486562)
chr5 (31-63)||(30778032-30778064)
chr5 (6-58)||(33075146-33075198)
chr5 (8-60)||(37067844-37067896)
chr5 (3-63)||(37870021-37870081)
[»] chr1 (48 HSPs)
chr1 (3-60)||(34953975-34954032)
chr1 (6-60)||(48083583-48083637)
chr1 (6-63)||(6758553-6758610)
chr1 (3-60)||(31998268-31998325)
chr1 (10-58)||(42761464-42761512)
chr1 (6-61)||(13043418-13043473)
chr1 (3-61)||(18607163-18607221)
chr1 (6-63)||(38834618-38834675)
chr1 (3-60)||(46412767-46412824)
chr1 (3-60)||(50503187-50503244)
chr1 (6-58)||(39216110-39216162)
chr1 (3-63)||(39940562-39940622)
chr1 (3-63)||(42761529-42761589)
chr1 (6-61)||(13048665-13048719)
chr1 (6-61)||(13053662-13053716)
chr1 (4-63)||(26344225-26344284)
chr1 (6-60)||(45010845-45010899)
chr1 (3-45)||(46412707-46412749)
chr1 (6-56)||(51022724-51022774)
chr1 (6-51)||(3013617-3013662)
chr1 (8-57)||(7461350-7461399)
chr1 (6-51)||(33939385-33939430)
chr1 (6-58)||(46906868-46906920)
chr1 (3-58)||(2352976-2353031)
chr1 (8-51)||(3549788-3549831)
chr1 (3-58)||(9590748-9590803)
chr1 (8-59)||(42660366-42660417)
chr1 (5-51)||(6508403-6508449)
chr1 (8-58)||(6508478-6508528)
chr1 (6-60)||(14891817-14891871)
chr1 (6-64)||(19580268-19580326)
chr1 (14-60)||(37589612-37589658)
chr1 (6-51)||(8338682-8338727)
chr1 (13-58)||(14958695-14958740)
chr1 (13-58)||(15351729-15351774)
chr1 (6-63)||(18353648-18353705)
chr1 (6-63)||(23398426-23398483)
chr1 (6-43)||(31998196-31998233)
chr1 (13-58)||(38468700-38468745)
chr1 (10-51)||(44349941-44349982)
chr1 (6-51)||(45115258-45115303)
chr1 (6-51)||(49586096-49586141)
chr1 (12-60)||(2492555-2492603)
chr1 (6-58)||(8352142-8352194)
chr1 (6-58)||(19175669-19175721)
chr1 (6-58)||(23944044-23944096)
chr1 (12-56)||(43728269-43728313)
chr1 (6-58)||(48083511-48083563)
[»] chr3 (45 HSPs)
chr3 (4-63)||(3648775-3648834)
chr3 (6-60)||(10872751-10872805)
chr3 (3-61)||(7601918-7601976)
chr3 (6-60)||(29389334-29389388)
chr3 (3-57)||(45736769-45736823)
chr3 (3-60)||(50466817-50466874)
chr3 (6-60)||(12744908-12744962)
chr3 (6-60)||(22497030-22497084)
chr3 (6-60)||(24722766-24722820)
chr3 (10-60)||(47334653-47334703)
chr3 (10-60)||(51060674-51060724)
chr3 (6-59)||(30578302-30578355)
chr3 (8-60)||(35987510-35987562)
chr3 (3-58)||(18940050-18940105)
chr3 (5-63)||(23642834-23642891)
chr3 (10-60)||(37897693-37897743)
chr3 (10-60)||(51253749-51253799)
chr3 (6-60)||(52215887-52215941)
chr3 (6-63)||(26104781-26104838)
chr3 (6-51)||(38677572-38677617)
chr3 (6-58)||(2128442-2128494)
chr3 (6-58)||(22496958-22497010)
chr3 (8-60)||(24075524-24075576)
chr3 (3-47)||(30197520-30197564)
chr3 (6-61)||(331876-331931)
chr3 (9-60)||(3648709-3648760)
chr3 (3-58)||(35237761-35237816)
chr3 (6-45)||(43818947-43818986)
chr3 (30-60)||(26243710-26243740)
chr3 (6-60)||(29222882-29222935)
chr3 (6-60)||(41743669-41743723)
chr3 (6-51)||(336073-336118)
chr3 (14-63)||(4980349-4980398)
chr3 (6-63)||(7882288-7882345)
chr3 (6-43)||(24722694-24722731)
chr3 (6-43)||(35987447-35987484)
chr3 (6-63)||(36571382-36571439)
chr3 (10-63)||(40169076-40169129)
chr3 (6-51)||(42929013-42929058)
chr3 (6-58)||(21217173-21217225)
chr3 (5-57)||(23090033-23090085)
chr3 (3-47)||(31706617-31706661)
chr3 (8-52)||(40202420-40202464)
chr3 (8-60)||(41743599-41743651)
chr3 (6-58)||(51239324-51239376)
[»] chr2 (53 HSPs)
chr2 (6-61)||(4563864-4563919)
chr2 (3-60)||(11342049-11342106)
chr2 (10-60)||(15859630-15859680)
chr2 (3-60)||(2050094-2050151)
chr2 (3-60)||(10996250-10996307)
chr2 (6-63)||(32143482-32143539)
chr2 (3-60)||(40204444-40204501)
chr2 (6-63)||(41805281-41805338)
chr2 (10-64)||(6074890-6074944)
chr2 (6-60)||(7079449-7079503)
chr2 (6-60)||(23377949-23378003)
chr2 (6-60)||(26003514-26003568)
chr2 (6-60)||(37195059-37195113)
chr2 (6-60)||(38465868-38465922)
chr2 (5-63)||(41824267-41824325)
chr2 (3-60)||(1961313-1961370)
chr2 (6-51)||(26234112-26234157)
chr2 (6-63)||(27331835-27331892)
chr2 (6-55)||(29819854-29819903)
chr2 (6-59)||(38618475-38618528)
chr2 (6-59)||(42530499-42530552)
chr2 (3-60)||(44706115-44706172)
chr2 (11-58)||(604870-604916)
chr2 (6-57)||(8383192-8383243)
chr2 (5-63)||(18731346-18731405)
chr2 (11-58)||(31175093-31175140)
chr2 (8-63)||(38181836-38181891)
chr2 (10-61)||(38581014-38581065)
chr2 (5-43)||(2050186-2050224)
chr2 (6-60)||(15119856-15119910)
chr2 (28-58)||(31211242-31211272)
chr2 (10-60)||(43732149-43732199)
chr2 (5-63)||(45473345-45473403)
chr2 (6-51)||(8740526-8740571)
chr2 (10-51)||(12116262-12116303)
chr2 (6-63)||(13994266-13994322)
chr2 (10-63)||(15916744-15916797)
chr2 (6-51)||(19612948-19612993)
chr2 (25-58)||(26269374-26269407)
chr2 (6-43)||(32143413-32143450)
chr2 (28-61)||(32218654-32218687)
chr2 (14-51)||(35438633-35438670)
chr2 (6-58)||(3098207-3098259)
chr2 (6-58)||(3121429-3121481)
chr2 (6-50)||(3121511-3121555)
chr2 (6-58)||(11726576-11726628)
chr2 (6-58)||(15119784-15119836)
chr2 (8-60)||(19951524-19951576)
chr2 (6-58)||(25270937-25270989)
chr2 (6-58)||(38594425-38594477)
chr2 (6-58)||(38598021-38598073)
chr2 (6-58)||(41056969-41057021)
chr2 (3-63)||(45472414-45472474)
[»] scaffold0631 (1 HSPs)
scaffold0631 (6-60)||(4354-4408)
[»] chr4 (72 HSPs)
chr4 (3-60)||(3511713-3511770)
chr4 (6-63)||(35151737-35151794)
chr4 (6-50)||(10308242-10308286)
chr4 (3-58)||(16537268-16537323)
chr4 (5-60)||(21142169-21142224)
chr4 (1-60)||(25138685-25138744)
chr4 (10-60)||(35425263-35425313)
chr4 (10-60)||(40952427-40952477)
chr4 (6-51)||(3669563-3669608)
chr4 (3-60)||(50686084-50686141)
chr4 (6-51)||(53176396-53176441)
chr4 (10-58)||(4406322-4406370)
chr4 (8-60)||(5816548-5816600)
chr4 (12-60)||(38298103-38298151)
chr4 (3-58)||(19934719-19934774)
chr4 (6-57)||(26920754-26920805)
chr4 (6-61)||(35151668-35151723)
chr4 (5-60)||(38539484-38539539)
chr4 (10-60)||(4484085-4484135)
chr4 (3-45)||(33376137-33376179)
chr4 (7-61)||(33377493-33377547)
chr4 (6-60)||(36072577-36072631)
chr4 (6-60)||(44755508-44755562)
chr4 (10-60)||(55416311-55416361)
chr4 (3-52)||(12672451-12672500)
chr4 (3-60)||(16170914-16170971)
chr4 (6-51)||(49481887-49481932)
chr4 (13-58)||(54508183-54508228)
chr4 (6-51)||(54713105-54713150)
chr4 (6-63)||(55934647-55934704)
chr4 (10-58)||(7740571-7740619)
chr4 (6-58)||(13689617-13689669)
chr4 (3-51)||(14450961-14451009)
chr4 (20-60)||(18423913-18423953)
chr4 (6-58)||(20215640-20215692)
chr4 (6-58)||(26636521-26636573)
chr4 (6-58)||(29006842-29006894)
chr4 (6-58)||(52914079-52914131)
chr4 (6-58)||(54164894-54164946)
chr4 (7-58)||(6462793-6462844)
chr4 (4-51)||(18881432-18881479)
chr4 (8-51)||(38716396-38716439)
chr4 (7-58)||(48402492-48402543)
chr4 (6-60)||(3094274-3094328)
chr4 (6-44)||(26920679-26920717)
chr4 (9-63)||(36786160-36786214)
chr4 (6-60)||(48603571-48603625)
chr4 (12-58)||(48995569-48995615)
chr4 (5-58)||(3504083-3504136)
chr4 (3-60)||(4370404-4370461)
chr4 (15-60)||(4708615-4708660)
chr4 (6-63)||(22768151-22768208)
chr4 (6-51)||(23071413-23071458)
chr4 (6-63)||(23568456-23568513)
chr4 (25-58)||(24331451-24331484)
chr4 (11-60)||(33693981-33694030)
chr4 (6-43)||(38381983-38382020)
chr4 (6-43)||(41346474-41346511)
chr4 (3-63)||(46803411-46803472)
chr4 (3-60)||(47308118-47308175)
chr4 (13-58)||(54106489-54106534)
chr4 (13-58)||(54106556-54106601)
chr4 (10-47)||(54338918-54338955)
chr4 (1-58)||(55936068-55936125)
chr4 (6-58)||(12168641-12168693)
chr4 (6-58)||(13689543-13689595)
chr4 (3-47)||(17657999-17658043)
chr4 (6-58)||(19597014-19597066)
chr4 (6-58)||(20215574-20215626)
chr4 (6-58)||(35005136-35005188)
chr4 (6-58)||(37255689-37255741)
chr4 (30-58)||(38938072-38938100)
[»] scaffold0149 (2 HSPs)
scaffold0149 (8-60)||(24615-24667)
scaffold0149 (6-58)||(24687-24739)
[»] chr7 (50 HSPs)
chr7 (6-58)||(2943293-2943345)
chr7 (3-63)||(30138864-30138924)
chr7 (10-57)||(21886478-21886525)
chr7 (13-60)||(22752574-22752621)
chr7 (6-60)||(31813418-31813472)
chr7 (3-51)||(6455553-6455601)
chr7 (6-54)||(45002083-45002131)
chr7 (10-61)||(9930399-9930450)
chr7 (6-61)||(37101777-37101832)
chr7 (6-61)||(43103150-43103205)
chr7 (4-55)||(48440015-48440066)
chr7 (5-63)||(24617803-24617861)
chr7 (3-60)||(6847280-6847337)
chr7 (3-60)||(26477240-26477297)
chr7 (3-60)||(26553680-26553737)
chr7 (13-58)||(44416613-44416658)
chr7 (10-58)||(9555341-9555389)
chr7 (6-58)||(23797429-23797481)
chr7 (4-60)||(28321569-28321625)
chr7 (8-47)||(2533949-2533988)
chr7 (8-51)||(3882816-3882859)
chr7 (9-60)||(21586893-21586944)
chr7 (6-61)||(24280899-24280954)
chr7 (8-63)||(25814758-25814813)
chr7 (11-58)||(32490601-32490648)
chr7 (28-63)||(33935027-33935062)
chr7 (3-54)||(34840746-34840797)
chr7 (19-54)||(37489535-37489570)
chr7 (8-63)||(39380615-39380670)
chr7 (6-61)||(43250417-43250472)
chr7 (18-60)||(4089868-4089910)
chr7 (6-60)||(23324792-23324846)
chr7 (3-61)||(46718058-46718116)
chr7 (6-63)||(5950270-5950327)
chr7 (6-63)||(9555267-9555324)
chr7 (6-63)||(12088887-12088944)
chr7 (6-63)||(23797355-23797412)
chr7 (10-55)||(38940231-38940276)
chr7 (8-61)||(41106093-41106146)
chr7 (6-47)||(43813132-43813173)
chr7 (10-63)||(45531960-45532013)
chr7 (6-58)||(1706840-1706892)
chr7 (35-63)||(2534016-2534044)
chr7 (6-58)||(7701195-7701247)
chr7 (6-58)||(10095726-10095778)
chr7 (10-58)||(22281885-22281933)
chr7 (3-63)||(31319592-31319652)
chr7 (6-58)||(37930779-37930831)
chr7 (6-58)||(41872132-41872184)
chr7 (4-44)||(44406428-44406468)
[»] scaffold0009 (2 HSPs)
scaffold0009 (9-60)||(146047-146098)
scaffold0009 (6-51)||(7745-7790)
[»] scaffold0341 (2 HSPs)
scaffold0341 (5-51)||(2426-2472)
scaffold0341 (5-51)||(10081-10127)
[»] scaffold0026 (1 HSPs)
scaffold0026 (8-58)||(88935-88985)
[»] scaffold0126 (1 HSPs)
scaffold0126 (4-61)||(23603-23660)
[»] scaffold0024 (1 HSPs)
scaffold0024 (6-58)||(120226-120278)
[»] scaffold0007 (1 HSPs)
scaffold0007 (6-58)||(246802-246854)


Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 32805914 - 32806087
Alignment:
Q  61 agtggattccacctcctagtggttatgttaagatcaatgtcgatgccgggtgttttagtgatggtacgacaggttgggggatggttgtgcgcaacgctgc 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32805914 agtggattccacctcctagtggttatgttaagatcaatgtcgatgccgggtgttttagtgatggtacgacaggttgggggatggttgtgcgcaacgctgc 32806013  T
Q  161 aggtctggttttgtttgcagagacaagatttgatggtatttcggtgtcacctttggtagctgaatgcatgggtt 234  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32806014 aggtctggttttgtgtgcagagacaagatttgatggtatttcggtgtcacctttggtagctgaatgcatgggtt 32806087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 10117103 - 10117049
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  10117103 tcactattataagcaaaaatttacattttagattcattcaattaatgatgtatat 10117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 11335696 - 11335646
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  11335696 tattataagcaaaactttgcattttagattcattcaattaataatgtatat 11335646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 44521384 - 44521326
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||  ||||||||    
T  44521384 cgatcactattataagcaaaactttgaattttagattcattcaattaatggtgtatata 44521326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 45045512 - 45045456
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||||| ||||||||    
T  45045512 gatcactattataaacaaaaatctatattttagattcattcaattaatgatgtatat 45045456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 33385307 - 33385249
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||| ||||||||||||||| ||| |||||||||||||||||||||| || ||||||    
T  33385307 cgatcaatattataagcaaaaccttacattttagattcattcaattaatgatatatata 33385249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 40640408 - 40640354
Alignment:
Q  9 ctattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||||| |||||    
T  40640408 ctattataagcaaaactttgcattttagattcattcaattaatgatgtacatagt 40640354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 2296608 - 2296556
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    |||||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  2296608 atcactattataagtaaaattttgcattttagattcattcaattaataatgta 2296556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 9015950 - 9015895
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| ||||||||| |||| | ||||||||||||||||||||||||| ||||||||    
T  9015950 atcattattataagtaaaaatctatattttagattcattcaattaatgatgtatat 9015895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 40640285 - 40640324
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattca 45  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  40640285 tcactattataagcaaaactttgtattttagattcattca 40640324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 7258718 - 7258664
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||| ||| ||||    
T  7258718 tcactattataagtaaaattttacattttagattcattcaattaatgatgcatat 7258664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 11335576 - 11335626
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||||| |||||||||||||||| | ||| ||||||    
T  11335576 actattataagcaaaactttacattttagattcattcattaaatgatgtat 11335626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 13290042 - 13290096
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||    
T  13290042 tcactattataagcaaaaaattacattttggattcattcaattaatagtgtatat 13290096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 24287792 - 24287846
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||||||  |||||||||||||||| | ||| ||||||||    
T  24287792 tcactattataagcaaaactttgcattttagattcattcattaaatgatgtatat 24287846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 31406352 - 31406294
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||||||||||||| ||||| ||| | | ||||||||||||||||||| |||||||||    
T  31406352 cgatcactattataaacaaaattttgtttgttagattcattcaattaattatgtatata 31406294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 41753891 - 41753841
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgt 56  Q
    |||||||||||| ||||| || |||||||||||||||||||||||| ||||    
T  41753891 tcactattataaacaaaaattaatattttagattcattcaattaatgatgt 41753841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 2296478 - 2296535
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| |||||||||||||| |||| |||||||||||||||| | ||| ||||||||    
T  2296478 cgatcattattataagcaaaattttacattttagattcattcattaaatgatgtatat 2296535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 3444627 - 3444680
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    |||||||||||||| ||||| |||| |||||| ||||||||||||||| |||||    
T  3444627 gatcactattataaacaaaaatttacattttatattcattcaattaatgatgta 3444680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 33070172 - 33070229
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||| |||||||||||||||| ||||||||||||||||| | ||| |||||| ||||    
T  33070172 tcactgttataagcaaaactttgtattttagattcattcattaaatgatgtatgtagt 33070229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 34326378 - 34326321
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||| |||| |||  |||||| ||||||||||||||| |||||||||||    
T  34326378 tcactattataagtaaaattttgcattttacattcattcaattaatgatgtatatagt 34326321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 34580700 - 34580651
Alignment:
Q  11 attataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||| ||||||| |||| |||||||||| ||||||||    
T  34580700 attataagcaaaactttgtattttatattctttcaattaatgatgtatat 34580651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 2805944 - 2805892
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||  |||| |||| |||||| ||||||||||||||||||||||||    
T  2805944 actattataaataaaattttacattttaaattcattcaattaataatgtatat 2805892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 29360879 - 29360827
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||| |||  |||||| ||||||| ||||||||||||||||    
T  29360879 actattataagcaaaattttgcattttatattcatttaattaataatgtatat 29360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 34326260 - 34326304
Alignment:
Q  14 ataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||    
T  34326260 ataagcaaaactttgcattttagattcattcaattaatgatgtat 34326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 36916716 - 36916664
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| ||||||||||||||| ||| | | ||||||||||    
T  36916716 tcactattataagcaaaattttatattttagatttatttattaaataatgtat 36916664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 41387895 - 41387843
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||   ||||||||||||||||||| | ||||||||||    
T  41387895 tcactattataagcaaaaaactatattttagattcattcattaaataatgtat 41387843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 7428901 - 7428951
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||| || ||||||||| |||||||||| ||| ||||||    
T  7428901 actattataagcaaaaattcatattttaggttcattcaataaatgatgtat 7428951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 29360759 - 29360809
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||| |||||||| ||||||||||||||||| | ||| ||||||||    
T  29360759 tattataagaaaaactttgtattttagattcattcattaaatgatgtatat 29360809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 33070298 - 33070244
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| |||  |||||||||||||||| |||||  |||||||    
T  33070298 tcactattataagcaaaattttgcattttagattcattcatttaatggtgtatat 33070244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 5888468 - 5888415
Alignment:
Q  7 cactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||| | ||  || |||||||||||||||||| ||||||||    
T  5888468 cactattataagcaaaaatctactttgtagattcattcaattaatgatgtatat 5888415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 8506343 - 8506298
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||||||||    
T  8506343 tataaacaaaaatttatgttttagattcattcaataaataatgtat 8506298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 10934610 - 10934667
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||   ||||||||| ||||||| ||||||| |||||| ||||    
T  10934610 tcactattataagcaaaaaactatattttacattcatttaattaatgatgtatgtagt 10934667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 13496568 - 13496523
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| |||| |||||| ||||||||| |||||    
T  13496568 tcactattataagcaaaaatttacattttaaattcattcatttaat 13496523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 13841855 - 13841912
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| ||||  ||||| ||||||||||| ||| |||||| ||||    
T  13841855 tcactattataagcaaaaatttactttttaaattcattcaataaatgatgtatttagt 13841912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 20524198 - 20524227
Alignment:
Q  31 ttttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||||||||||||||    
T  20524198 ttttagattcattcaattaataatgtatat 20524227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 23627673 - 23627730
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| | | ||||||||||| ||||| ||||| ||||| |||||    
T  23627673 tcactattataagcaaaaatctgtattttagatttattcatttaatgatgtacatagt 23627730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 29424109 - 29424064
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||| || |||||||||||||||||||| ||| ||||||    
T  29424109 tataagcaaaaattcatattttagattcattcaataaatgatgtat 29424064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 92762 - 92822
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||| ||||| |  | | |||||||||||||| |||||||||||| ||||    
T  92762 cgatcactattataaacaaaaatcaacaatttagattcattcatttaataatgtatgtagt 92822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 1739698 - 1739646
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| ||||  |||||||| |||||||||||| ||||||    
T  1739698 tcactaatataagcaaaaatttactttttagatacattcaattaatgatgtat 1739646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 2382593 - 2382645
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||| ||||||||| ||||| ||||||||||| | ||| ||||||    
T  2382593 tcactattataaacaaaactttgtatttcagattcattcattaaatgatgtat 2382645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 3385609 - 3385569
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaatt 48  Q
    |||||||||||||||||| || |||||||||||||| ||||    
T  3385609 actattataagcaaaactctacattttagattcattgaatt 3385569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 6197959 - 6197907
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||||||||  |||||||| |||| ||| | ||||||||    
T  6197959 tcactattataagcaaaactttactttttagatacattaaataattaatgtat 6197907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 14700374 - 14700322
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||| |||| ||| ||||||||||||||| | | ||||||||||    
T  14700374 tcactattataagtaaaattttgtattttagattcatttattaaataatgtat 14700322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 18603471 - 18603519
Alignment:
Q  12 ttataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| ||||| || | |||||||||||||| ||||||||||||||||    
T  18603471 ttataaacaaaagttcacattttagattcatttaattaataatgtatat 18603519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 24053604 - 24053656
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| |||||||||||  ||||||||||| |||||||| ||||| ||||||    
T  24053604 tcactaatataagcaaaaaattatattttaggttcattcatttaatgatgtat 24053656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 29423999 - 29424031
Alignment:
Q  15 taagcaaaactttatattttagattcattcaat 47  Q
    ||||||||| |||||||||||||||||||||||    
T  29423999 taagcaaaaatttatattttagattcattcaat 29424031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 6095003 - 6094830
Alignment:
Q  61 agtggattccacctcctagtggttatgttaagatcaatgtcgatgccgggtgttttagtgatggtacgacaggttgggggatggttgtgcgcaacgctgc 160  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6095003 agtggattccacttcctagtggttatgttaagatcaacgtcgatgccgggtgttttagtgatggtacgacaggttgggggatggttgtgcgcaacgctgc 6094904  T
Q  161 aggtctggttttgtttgcagagacaagatttgatggtatttcggtgtcacctttggtagctgaatgcatgggtt 234  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6094903 aggtctggttttgtttgcagagacaagatttgatggtatctcggtgtcacctttggtagctgaatgcatgggtt 6094830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 33689236 - 33689293
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||    
T  33689236 tcactattataagcaaaaatcaatattttatattcattcaattaataatgtatatagt 33689293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 8449709 - 8449655
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| || |||||||||||||||||||||||| ||| ||||    
T  8449709 tcactattataagcaaaaattaatattttagattcattcaattaatgatgcatat 8449655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 8458513 - 8458459
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| || |||||||||||||||||||||||| ||| ||||    
T  8458513 tcactattataagcaaaaattaatattttagattcattcaattaatgatgcatat 8458459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 11637177 - 11637231
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||    
T  11637177 tcactattataagcaaaacattacattttaaattcattcaattaatgatgtatat 11637231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 13281541 - 13281595
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| | || |||||||||||||||||||||| ||||||||    
T  13281541 tcactattataagcaaaaatctagattttagattcattcaattaatgatgtatat 13281595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 18886441 - 18886387
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| || |||||||||||||||||||||| ||||||||||||||| ||||||    
T  18886441 tcactaataaaagcaaaactttatattttagagtcattcaattaataacgtatat 18886387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 12383920 - 12383865
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||||||||||| | || |||||||| ||||||||||||| |||||||||    
T  12383920 tcactattataagcaaaaatctacattttagactcattcaattaattatgtatata 12383865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 32254957 - 32254902
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||||| || |||||||||||||||||| | ||| ||||||    
T  32254957 cgatcactattataagcaaaagttaatattttagattcattcattaaatgatgtat 32254902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 14031805 - 14031751
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    ||||||| |||||||| |||| | ||||||||||||||||||||||||| |||||    
T  14031805 cgatcacaattataagtaaaaatctatattttagattcattcaattaatgatgta 14031751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 6032972 - 6033025
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||| |||| || |||||||||||||||| ||| ||||||||||    
T  6032972 atcactattataagtaaaaattgatattttagattcatttaataaataatgtat 6033025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 31398359 - 31398314
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||    
T  31398359 tcactattataagcaaaagtttacattttagattcattcatttaat 31398314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 3199853 - 3199797
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| |||||||||||||||  ||| |||||| |||||||||||||||| |||||||    
T  3199853 gatctctattataagcaaaaacttacattttatattcattcaattaatagtgtatat 3199797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 8449578 - 8449633
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||||| || ||||||| |||| ||||||| ||| ||||||    
T  8449578 cgatcactattataagcaaaaattaatattttggatttattcaataaatgatgtat 8449633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 8458382 - 8458437
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||||| || ||||||| |||| ||||||| ||| ||||||    
T  8458382 cgatcactattataagcaaaaattaatattttggatttattcaataaatgatgtat 8458437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 18886315 - 18886354
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattca 45  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  18886315 tcactattataagcaaaaattaatattttagattcattca 18886354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 21998043 - 21998098
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||| ||||||||||| |  || |||||||| |||||||||||||||||||    
T  21998043 cgatcactaatataagcaaaaatacattttttagatacattcaattaataatgtat 21998098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 11746361 - 11746307
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||| ||||||  |||| |||| |||||||||||||||||||||| ||||||||    
T  11746361 tcactgttataaaaaaaaatttacattttagattcattcaattaatgatgtatat 11746307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 13506841 - 13506895
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| |||| || ||| ||||||| ||||||| ||||||||    
T  13506841 tcactattataagcaaaagtttacatcttaaattcatttaattaatgatgtatat 13506895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 31996506 - 31996560
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| ||||||||||||| |  | |||| ||||||||||||||||||||||||||    
T  31996506 tcaccattataagcaaaaatcaacatttcagattcattcaattaataatgtatat 31996560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 8030441 - 8030396
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||| ||||| ||||| ||||||||||| ||||||||||    
T  8030441 tataagcaaaaatttatcttttaaattcattcaataaataatgtat 8030396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 13277148 - 13277103
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||| ||||| ||||||||||||||||||||||| ||| ||||||    
T  13277148 tataaacaaaaatttatattttagattcattcaataaatgatgtat 13277103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 18097067 - 18097104
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcatt 43  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  18097067 tcactattataagcaaaagtttacattttagattcatt 18097104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 29215576 - 29215539
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcatt 43  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  29215576 tcactattataagcaaaattttgtattttagattcatt 29215539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 29418941 - 29418998
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||  ||| |||||| ||| ||||||||||| |||||| ||||    
T  29418941 tcactattataagcaaaaaattacattttacattaattcaattaatgatgtatgtagt 29418998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 5571529 - 5571565
Alignment:
Q  7 cactattataagcaaaactttatattttagattcatt 43  Q
    |||||||||||||||||||||  ||||||||||||||    
T  5571529 cactattataagcaaaactttgcattttagattcatt 5571565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 14310654 - 14310602
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| | | ||||||||||||||||| ||||| ||||||    
T  14310654 tcactaatataagcaaaaatctgtattttagattcattcatttaatgatgtat 14310602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 26527323 - 26527271
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || | |||||||||||||||| | ||| ||||||    
T  26527323 tcactattataagcaaaaattaacattttagattcattcattaaatgatgtat 26527271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 30916958 - 30917006
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||||||  ||| |||||| ||| |||||||||||    
T  30916958 cgatcactattataagcaaaaaattacattttacatttattcaattaat 30917006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 14772679 - 14772622
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  14772679 tcactattataagcaaaactttatattttagattaattcaattaatgatgtatatagt 14772622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 33075072 - 33075126
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33075072 tcactaatataagcaaaactttatattttagattcattcaattaataacgtatat 33075126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 71266 - 71320
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  71266 tcactattataagcaaaaatctatattttagattcattcaattaatgatgtatat 71320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 31691395 - 31691337
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||||    
T  31691395 cgatcactattataagtaaaaatttatatttgagattcattcaattaatgatgtatata 31691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 26045274 - 26045317
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  26045274 actattataagcaaaaatttatattttagattcattcaattaat 26045317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 5984112 - 5984062
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||||||    
T  5984112 tattataagcaaaactttgcattttagattcattcaattaatgatgtatat 5984062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 7329989 - 7330043
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||||| |||||    
T  7329989 tcactattataagcaaaactttgcattttagattcattcatttaataatatatat 7330043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 32398139 - 32398081
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||||||||||||| ||||| | ||||||||| ||||||||||||||| |||||||||    
T  32398139 cgatcactattataaacaaaaatctatattttaaattcattcaattaatgatgtatata 32398081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 1098760 - 1098703
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| ||||| ||||||||||||| ||| |||||||||| ||||    
T  1098760 tcactattataagcaaaagtttattttttagattcatttaataaataatgtatgtagt 1098703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 3100541 - 3100484
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||  ||| |||| |||||||||||||||||||||| ||||||||    
T  3100541 cgatcactattataagtgaaaatttacattttagattcattcaattaatgatgtatat 3100484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 41814388 - 41814441
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    ||||| ||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  41814388 gatcattattataggcaaaaatttacattttagattcattcaattaataatgta 41814441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 2974547 - 2974599
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||||||| |||||||||||||||  |||||| ||||||    
T  2974547 tcactattataagcaaaactttgtattttagattcattatattaatgatgtat 2974599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 35032397 - 35032349
Alignment:
Q  12 ttataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  35032397 ttataagcaaaaatttacattttagattcattcaattaattatgtatat 35032349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 15549458 - 15549403
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||||| ||||| |  | ||||||||||||||||||||||||||||||||    
T  15549458 tcactattataaacaaaaatcaacattttagattcattcaattaataatgtatata 15549403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 30371463 - 30371412
Alignment:
Q  9 ctattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||  |||||||||||||||||| |||||||| |||||||    
T  30371463 ctattataagcaaaaaattatattttagattcatttaattaatattgtatat 30371412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 3100411 - 3100469
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||| || | |||||||||||||||||| ||| |||||| ||||    
T  3100411 atcactattataagcaaaaattaacattttagattcattcaataaatgatgtatgtagt 3100469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 10437645 - 10437699
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||| | ||||||||    
T  10437645 tcactattataagtaaaactttgtattttaaattcattcaattagtgatgtatat 10437699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 31706095 - 31706037
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||| ||||||||| |||| |||| |||||| ||||||| |||||||||||||||||    
T  31706095 cgatcattattataagtaaaaatttacattttaaattcatttaattaataatgtatata 31706037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 35729440 - 35729494
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| ||||||||||||| |||| ||||||||||| ||||||||||||| |||||    
T  35729440 tcacaattataagcaaaattttacattttagattcgttcaattaataatatatat 35729494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 26141762 - 26141807
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||    
T  26141762 tcactattataagcaaaagtttacattttagattcattcatttaat 26141807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 38154569 - 38154610
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaat 47  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  38154569 tcactattataagcaaaattttatattttagatttattcaat 38154610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 37944735 - 37944683
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| ||||| |||||||| |||||||||||| ||||||    
T  37944735 tcactaatataagcaaaaatttattttttagatacattcaattaatgatgtat 37944683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 19868929 - 19868980
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    |||||| | ||||||||| | ||||||||||||||||||| |||||||||||    
T  19868929 tcactaatgtaagcaaaaatctatattttagattcattcatttaataatgta 19868980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 11795743 - 11795797
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||| ||||||||    
T  11795743 tcactaatataagcaaaaatcaacattttagattcattcaattaatgatgtatat 11795797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 34867555 - 34867597
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattca 45  Q
    ||||||||||||||||||||  ||| |||||||||||||||||    
T  34867555 cgatcactattataagcaaagttttgtattttagattcattca 34867597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 37554461 - 37554423
Alignment:
Q  25 tttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  37554461 tttattttttagattcattcaattaataatgtatgtagt 37554423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 37685084 - 37685046
Alignment:
Q  25 tttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  37685084 tttattttttagattcattcaattaataatgtatgtagt 37685046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 43117390 - 43117432
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattca 45  Q
    ||||||||||||||||||||| |  ||||||||||||||||||    
T  43117390 cgatcactattataagcaaaaatcaatattttagattcattca 43117432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 43438391 - 43438349
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattca 45  Q
    ||||||||||||||| ||||| || ||||||||||||||||||    
T  43438391 cgatcactattataaacaaaaattaatattttagattcattca 43438349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 25408557 - 25408602
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||| || |||||||||||||||||||| ||| ||||||    
T  25408557 tataagcaaaaattcatattttagattcattcaataaatgatgtat 25408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 25408669 - 25408624
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||| ||||| ||||||||||||||||| ||| ||||||    
T  25408669 tataagcaaaaatttatgttttagattcattcaataaatgatgtat 25408624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 8681698 - 8681746
Alignment:
Q  12 ttataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||| |||||| ||||||| ||||||| ||| ||||    
T  8681698 ttataagcaaaactttaaattttaaattcatttaattaatgatgaatat 8681746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 58
Target Start/End: Complemental strand, 14642125 - 14642097
Alignment:
Q  30 attttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||||||||||||||    
T  14642125 attttagattcattcaattaataatgtat 14642097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 17967448 - 17967396
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||| ||||| || |||||||| ||||||||||| ||| ||||||    
T  17967448 tcactattataaacaaaaattgatattttatattcattcaataaatgatgtat 17967396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 18261607 - 18261659
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || |  || |||||||||||||| ||||||||||    
T  18261607 tcactattataagcaaaagttcactttatagattcattcaataaataatgtat 18261659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 25037142 - 25037182
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaa 50  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  25037142 tattataagcaaaactttgcattttagattcattcatttaa 25037182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 25941804 - 25941748
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||| ||||| |  ||||||||  ||||||||||||||||| |||||    
T  25941804 gatcactattataaacaaaaatcaatattttaagttcattcaattaataatatatat 25941748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 26300118 - 26300170
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| ||||  |||||||| |||||||||||| ||||||    
T  26300118 tcactaatataagcaaaaatttactttttagatacattcaattaatgatgtat 26300170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 29177844 - 29177800
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaa 50  Q
    ||||| |||||| ||||| |||| |||||||||||||||||||||    
T  29177844 tcactgttataaacaaaaatttacattttagattcattcaattaa 29177800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 29486502 - 29486562
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||||| || | ||||||||| |||| ||| | |||||||| ||||    
T  29486502 cgatcactattataagcaaaatttcacattttagatacattgaataattaatgtatctagt 29486562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 30778032 - 30778064
Alignment:
Q  31 ttttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||||||||||||| ||||    
T  30778032 ttttagattcattcaattaataatgtatttagt 30778064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 33075198 - 33075146
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || ||||||||| |||||||| | ||| ||||||    
T  33075198 tcactattataagcaaaaattaatattttaggttcattcattaaatgatgtat 33075146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 37067896 - 37067844
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||| | || |||||||||||| | ||||||| ||||||||    
T  37067896 actattataagcaaaaatctacattttagattcaattaattaatgatgtatat 37067844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 37870021 - 37870081
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||| |||||||||||    || |||||||| ||||||||||||| ||||||||||    
T  37870021 cgatcactaatataagcaaaaaaccattttttagatacattcaattaatattgtatatagt 37870081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 34954032 - 34953975
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  34954032 cgatcactattataagcaaaaatttatattttagattcattcaattaatgatgtatat 34953975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 48083637 - 48083583
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48083637 tcactaatataagcaaaactttatattttagattcattcaattaataacgtatat 48083583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 6758553 - 6758610
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||||    
T  6758553 tcactattataagcaaaactttgcattttacattcattcaattaatgatgtatatagt 6758610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 31998325 - 31998268
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||||    
T  31998325 cgatcactattataagcaaaactttgcattttagattcattcatttaatgatgtatat 31998268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 42761464 - 42761512
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  42761464 tattataagcaaaactttacattttagattcattcaattaatgatgtat 42761512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 13043473 - 13043418
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||||||||||| |||| || |||||||||||||||||||||||| |||||||||    
T  13043473 tcactattataagtaaaaattaatattttagattcattcaattaatgatgtatata 13043418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 18607221 - 18607163
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||||||||||||| ||||| | ||||||||| |||||||||||||||||| ||||||    
T  18607221 cgatcactattataaacaaaaatctatattttaaattcattcaattaataatatatata 18607163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 38834618 - 38834675
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| ||||| ||||||||||||| ||| ||| |||||||||||    
T  38834618 tcactattataagcaaaaatttattttttagattcattaaataaatgatgtatatagt 38834675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 46412824 - 46412767
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||| |||| |||| ||||| |||||||||||||||| ||||||||    
T  46412824 cgatcactattataagtaaaaatttacattttggattcattcaattaatgatgtatat 46412767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 50503187 - 50503244
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||| || || ||||||||||||||| ||||||||||| ||||||||    
T  50503187 cgatcactattataaacacaaatttatattttagatttattcaattaatgatgtatat 50503244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 39216110 - 39216162
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||| ||||||    
T  39216110 tcactattataagcaaaactttgcattttagactcattcaattaatgatgtat 39216162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 39940622 - 39940562
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||| |||| ||||  ||||||||||||||||| |||||||||| ||||    
T  39940622 cgatcactattataagtaaaaatttactttttagattcattcaataaataatgtatgtagt 39940562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 42761589 - 42761529
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||| |||||||||||||||||||| |||||| |||||||||| | ||| |||||||||||    
T  42761589 cgattactattataagcaaaactttttatttttgattcattcattaaatgatgtatatagt 42761529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 13048665 - 13048719
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||||||| |||||||| || |||||||||||||||||||||||| |||||||||    
T  13048665 tcactatta-aagcaaaaattaatattttagattcattcaattaatgatgtatata 13048719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 13053662 - 13053716
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||||||| |||||||| || |||||||||||||||||||||||| |||||||||    
T  13053662 tcactatta-aagcaaaaattaatattttagattcattcaattaatgatgtatata 13053716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 26344225 - 26344284
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||| |||| | ||||||||| ||| ||| |||||||||||||||||||    
T  26344225 gatcactattataagaaaaaatatatattttaaatttatttaattaataatgtatatagt 26344284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 45010845 - 45010899
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| |||  |||||| ||||||||||||||| ||||||||    
T  45010845 tcactattataagcaaaattttgcattttaaattcattcaattaatgatgtatat 45010899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 46412707 - 46412749
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattca 45  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  46412707 cgatcactattataagcaaaaattaatattttagattcattca 46412749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 51022724 - 51022774
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgt 56  Q
    |||||||||||||||||| || |||||||||||||||||||| ||| ||||    
T  51022724 tcactattataagcaaaagttgatattttagattcattcaataaatgatgt 51022774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 3013617 - 3013662
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||    
T  3013617 tcactattataagcaaaaaattatattttagatttattcaattaat 3013662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 7461399 - 7461350
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||| |||||    
T  7461399 actattataagtaaaactttgtattttagattcatttaattaatgatgta 7461350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 33939430 - 33939385
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||    
T  33939430 tcactattataagcaaaagtttacattttagattcattcatttaat 33939385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 46906868 - 46906920
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| | ||||||||||||||||||| | ||| ||||||    
T  46906868 tcactattataagcaaaaatctatattttagattcattcattaaatgatgtat 46906920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 2353031 - 2352976
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||| ||||||||||| ||||| |||||||| |||| ||||||| ||||||    
T  2353031 cgatcactaatataagcaaaaatttattttttagatacatttaattaatgatgtat 2352976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 3549788 - 3549831
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||| | || ||||||||||||||||||||||    
T  3549788 actattataagcaaaaatctacattttagattcattcaattaat 3549831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 9590748 - 9590803
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||||| |||  |||||||||||||||| | || |||||||    
T  9590748 cgatcactattataagcaaaattttgcattttagattcattcattaaacaatgtat 9590803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 42660366 - 42660417
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtata 59  Q
    |||||||||||||||| || || ||||||||||||||||| ||| |||||||    
T  42660366 actattataagcaaaagttgattttttagattcattcaataaatgatgtata 42660417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 6508403 - 6508449
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    ||||||||||||||||||| |||| || ||||||||||||| |||||    
T  6508403 atcactattataagcaaaaatttacatcttagattcattcatttaat 6508449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 6508528 - 6508478
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||| ||||||||||| |||||||||||| |||||| | ||||||||||||    
T  6508528 actaatataagcaaaaatttatattttaggttcatttatttaataatgtat 6508478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 14891871 - 14891817
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| |||| |||||||||| || |||| ||| ||||||||    
T  14891871 tcactattataagcaaaaatttaaattttagatttatccaataaatgatgtatat 14891817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 19580326 - 19580268
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagtg 64  Q
    |||||||||||| ||||| | ||| ||||||||||||||||| ||| |||||| |||||    
T  19580326 tcactattataaacaaaagtatattttttagattcattcaataaatgatgtatgtagtg 19580268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 37589612 - 37589658
Alignment:
Q  14 ataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||| | ||||||||||||||||| |||||||||| |||||    
T  37589612 ataagcaaaagtctatattttagattcatttaattaataatttatat 37589658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 8338682 - 8338727
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| | || |||||||||||||||| |||||    
T  8338682 tcactattataagcaaaaatctacattttagattcattcatttaat 8338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 14958695 - 14958740
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||| | |||||||||||||||||| ||| ||||||    
T  14958695 tataagcaaaacttcaaattttagattcattcaataaatgatgtat 14958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 15351729 - 15351774
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||| ||||||||||| ||||||||||| ||| ||||||    
T  15351729 tataagcaaaaatttatattttaaattcattcaataaatgatgtat 15351774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 18353705 - 18353648
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| |    |||||||||||||||||||||| || ||||||||    
T  18353705 tcactattataagcaaaaatcataattttagattcattcaattaatgatatatatagt 18353648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 23398426 - 23398483
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||  | | |||||||||||||||| | ||| |||||||||||    
T  23398426 tcactattataagcaaaaactaacattttagattcattcattaaatgatgtatatagt 23398483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 31998196 - 31998233
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcatt 43  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  31998196 tcactattataagcaaaactttgtattttatattcatt 31998233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 38468700 - 38468745
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  38468700 tataagctaaattttatgttttagattcattcaataaataatgtat 38468745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 44349941 - 44349982
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||| ||||| ||||||||||||||||||||| |||||    
T  44349941 tattataaacaaaagtttatattttagattcattcatttaat 44349982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 45115303 - 45115258
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| | || |||||||||||||||| |||||    
T  45115303 tcactattataagcaaaaatctacattttagattcattcatttaat 45115258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 49586096 - 49586141
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| |||| |||||| ||||||||| |||||    
T  49586096 tcactattataagcaaaagtttacattttaaattcattcatttaat 49586141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 2492603 - 2492555
Alignment:
Q  12 ttataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||| |||| ||||||||| |||||||| ||| ||||||||    
T  2492603 ttataagcaaaagtttacattttagatccattcaataaatgatgtatat 2492555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 8352142 - 8352194
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||||| || |||||||| |||| ||| | ||||||||    
T  8352142 tcactattataagcaaaacttcattttttagatacattgaatgattaatgtat 8352194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 19175721 - 19175669
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| | ||  ||||||||||||||||| ||| ||||||    
T  19175721 tcactattataagcaaaaatctactttttagattcattcaataaatgatgtat 19175669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 23944044 - 23944096
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| || || |||||||| |||||||||||| ||||||    
T  23944044 tcactaatataagcaaaaattcattttttagatacattcaattaatgatgtat 23944096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 43728313 - 43728269
Alignment:
Q  12 ttataagcaaaactttatattttagattcattcaattaataatgt 56  Q
    |||||||||||| || |||||||||||||||| ||||||| ||||    
T  43728313 ttataagcaaaaattaatattttagattcattaaattaatgatgt 43728269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 48083511 - 48083563
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || ||||||||| |||||||| | ||| ||||||    
T  48083511 tcactattataagcaaaaattaatattttaggttcattcattaaatgatgtat 48083563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 3648834 - 3648775
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  3648834 gatcactattataagcaaaactttatattttacattcattcaatcaatgatgtatatagt 3648775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 10872805 - 10872751
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  10872805 tcactattataagcaaaaatttatattttagattcattcaattaatgatgtatat 10872751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 7601918 - 7601976
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||  ||||||||    
T  7601918 cgatcactattataagcaaaactttgaattttagattcattcaattaatggtgtatata 7601976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 29389334 - 29389388
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| ||||||||    
T  29389334 tcactattataagcaaaaatttatattttagattcgttcaattaatgatgtatat 29389388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 45736823 - 45736769
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  45736823 cgatcactattataagcaaaattttatattttaaattcattcaattaatgatgta 45736769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 50466817 - 50466874
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  50466817 cgatcattattataagtaaaaatttatattttagattcattcaattaatgatgtatat 50466874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 12744908 - 12744962
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||| ||||||||    
T  12744908 tcactattataagcaaaaacttacattttagattcattcaattaatgatgtatat 12744962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 22497084 - 22497030
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| || ||||||||||||| |||||||||||||||||||||||| ||||||    
T  22497084 tcactaataaaagcaaaactttacattttagattcattcaattaataacgtatat 22497030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 24722820 - 24722766
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| || ||||||||||||| |||||||||||| ||||||||||||||||||    
T  24722820 tcactaataaaagcaaaactttacattttagattcactcaattaataatgtatat 24722766  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 47334653 - 47334703
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  47334653 tattataagcaaaactttgtattttaaattcattcaattaatgatgtatat 47334703  T

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Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 51060674 - 51060724
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  51060674 tattataagcaaaaatttacattttagattaattcaattaataatgtatat 51060724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 30578355 - 30578302
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtata 59  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||| |||||||    
T  30578355 tcactattataagcaaaactttgtattttagattcattcattaaatgatgtata 30578302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 35987562 - 35987510
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  35987562 actaatataaacaaaattttatattttagatttattcaattaataatgtatat 35987510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 18940105 - 18940050
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||| ||||||||||| ||||||||||| || |||||||||||| ||||||    
T  18940105 cgatcactaatataagcaaaaatttatattttatatacattcaattaatgatgtat 18940050  T

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Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 23642891 - 23642834
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||| |  |||||||||||||| ||||||||| |||||||||||    
T  23642891 atcactattataagcaaaaatcaatattttagattca-tcaattaatgatgtatatagt 23642834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 37897693 - 37897743
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||| | || |||||||||||||||||||||| ||||||||    
T  37897693 tattataagcaaaaatctaaattttagattcattcaattaatgatgtatat 37897743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 51253799 - 51253749
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||| || ||||| |||||||||||||| ||||||||||||    
T  51253799 tattataagcaaaaattaatattgtagattcattcaatcaataatgtatat 51253749  T

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Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 52215887 - 52215941
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| |||| ||||||||||||| ||||| || ||||||||    
T  52215887 tcactattataagcaaaaatttacattttagattcatgcaattgatgatgtatat 52215941  T

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Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 26104781 - 26104838
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||| ||||||||||| |||| ||||||| |||||||| ||||| |||||||||||    
T  26104781 tcactaatataagcaaaaatttacattttaggttcattcatttaatgatgtatatagt 26104838  T

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Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 38677572 - 38677617
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||    
T  38677572 tcactattataagcaaaagtttacattttagattcattcatttaat 38677617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 2128494 - 2128442
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || || ||||||||||||||||| ||| ||||||    
T  2128494 tcactattataagcaaaaattcatgttttagattcattcaataaatgatgtat 2128442  T

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Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 22496958 - 22497010
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || |||||||||||||||||| | ||| ||||||    
T  22496958 tcactattataagcaaaaattaatattttagattcattcattaaatgatgtat 22497010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 24075576 - 24075524
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||| | || ||||||||||||||||||| || ||||||||    
T  24075576 actattataagcaaaaatctacattttagattcattcaattcatgatgtatat 24075524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 30197564 - 30197520
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaat 47  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||    
T  30197564 cgatcactattataagcaaaaatctatattttatattcattcaat 30197520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 331931 - 331876
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||||||||||| || | |||||||||||||||| | ||| |||||||||    
T  331931 tcactattataagcaaaaattaacattttagattcattcattaaatgatgtatata 331876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 3648709 - 3648760
Alignment:
Q  9 ctattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||| ||||||||  |||||||||| ||||||||||| ||||||||    
T  3648709 ctattataagaaaaactttgcattttagatttattcaattaatgatgtatat 3648760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 35237816 - 35237761
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||||| |||||| |||| ||||||||| | ||| ||||||    
T  35237816 cgatcactattataagcaaaattttatactttaaattcattcattaaatgatgtat 35237761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 43818986 - 43818947
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattca 45  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  43818986 tcactattataagcaaaactttgcattttagattcattca 43818947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 26243710 - 26243740
Alignment:
Q  30 attttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||||||||||||||||    
T  26243710 attttagattcattcaattaataatgtatat 26243740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 29222935 - 29222882
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||||    
T  29222935 tcactgttataagcaaa-ctttgtattttaaatttattcaattaataatgtatat 29222882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 41743723 - 41743669
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||| |||| |||| ||||| |||||||||| ||||| ||||||||    
T  41743723 tcactattataagtaaaagtttacattttggattcattcagttaatgatgtatat 41743669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 336073 - 336118
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    ||||||||||||| |||| |||| |||||||||||||||| |||||    
T  336073 tcactattataagtaaaagtttacattttagattcattcatttaat 336118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 4980398 - 4980349
Alignment:
Q  14 ataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||| || |||||||||||||||||||| ||| |||||| ||||    
T  4980398 ataagcaaaaattcatattttagattcattcaataaatgatgtatgtagt 4980349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 7882288 - 7882345
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| || | |||||||||||||| | | ||| |||||||||||    
T  7882288 tcactattataagcaaaaattaacattttagattcattaattaaatgatgtatatagt 7882345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 24722694 - 24722731
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcatt 43  Q
    |||||||||||||||||| || ||||||||||||||||    
T  24722694 tcactattataagcaaaaattaatattttagattcatt 24722731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 35987447 - 35987484
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcatt 43  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  35987447 tcactattataaacaaaactttgtattttagattcatt 35987484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 36571382 - 36571439
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| ||| | ||||||||| ||||||| ||| |||||| ||||    
T  36571382 tcactattataagcaaaagtttcttttttagatttattcaataaatgatgtatgtagt 36571439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 40169129 - 40169076
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||| || || |||||  ||||||||||||||||||||| ||||    
T  40169129 tattataagcaaaaattaattttttaagttcattcaattaataatgtatttagt 40169076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 42929013 - 42929058
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| | || |||||| |||||||||||||||    
T  42929013 tcactattataagcaaaattctaaattttatattcattcaattaat 42929058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 21217173 - 21217225
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| | || |||||||||||||||| | ||| ||||||    
T  21217173 tcactattataagcaaaaatctacattttagattcattcattaaatgatgtat 21217225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 23090085 - 23090033
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    ||||||||||||| ||||| | || || ||||||||||||||||||| |||||    
T  23090085 atcactattataaacaaaaatatacatgttagattcattcaattaatgatgta 23090033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 31706617 - 31706661
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaat 47  Q
    ||||||| | ||||||||||| || ||||||||||||||||||||    
T  31706617 cgatcacaaatataagcaaaaattcatattttagattcattcaat 31706661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 40202420 - 40202464
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaata 52  Q
    |||||||||||||||| |||| |||||  ||||||||||||||||    
T  40202420 actattataagcaaaaatttacattttgcattcattcaattaata 40202464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 41743599 - 41743651
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||| || ||||||||||||| |||| | ||| ||||||||    
T  41743599 actattataagcaaaaattaatattttagattcgttcattaaatgatgtatat 41743651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 51239376 - 51239324
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| | ||| |||||||| |||||||||||| ||||||    
T  51239376 tcactaatataagcaaaaatctattttttagatacattcaattaatgatgtat 51239324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 4563864 - 4563919
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  4563864 tcactattattagcaaaagtttatattttagattcattcaattaataatgtatata 4563919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 11342106 - 11342049
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  11342106 cgatcactattataagcaaaaatctatattttagattcatttaattaatgatgtatat 11342049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 15859680 - 15859630
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  15859680 tattataagcaaaaatctatattttagattcattcaattaatgatgtatat 15859630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 2050094 - 2050151
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||||||||| ||||||||||| ||| | ||||| ||||||||    
T  2050094 cgatcactattataagcaaaactttttattttagatttatttatttaatgatgtatat 2050151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 10996250 - 10996307
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| |||||||||||||| ||||||||||| ||||||| ||||||| ||||||||    
T  10996250 cgatcattattataagcaaaaatttatattttaaattcattgaattaatgatgtatat 10996307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 32143539 - 32143482
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  32143539 tcactgttataagcaaaactttacattttaaattcattcaattaatgaagtatatagt 32143482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 40204444 - 40204501
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||||| | |||||| || ||||||||||||||| ||||||||    
T  40204444 cgatcactattataagcaaaaatctatattatacattcattcaattaatgatgtatat 40204501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 41805281 - 41805338
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| |||  |||||| ||||||||||||||| |||||||||||    
T  41805281 tcactattataagcaaaattttgcattttaaattcattcaattaatgatgtatatagt 41805338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 6074944 - 6074890
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatatagtg 64  Q
    ||||||||||||||||||  |||||||||| ||| ||||||| ||||||||||||    
T  6074944 tattataagcaaaactttgcattttagattaatttaattaattatgtatatagtg 6074890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 7079503 - 7079449
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||   ||||||||||||||||| ||||||| ||||||||    
T  7079503 tcactattataagcaaaaacatatattttagattcatttaattaatgatgtatat 7079449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 23377949 - 23378003
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||| || ||||||||  |||||||||||||||||||||| ||||||||    
T  23377949 tcactattattagtaaaactttgcattttagattcattcaattaatgatgtatat 23378003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 26003568 - 26003514
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||| |||||||||||| | || |||||||||||||||||||||| ||||||||    
T  26003568 tcacttttataagcaaaaatctacattttagattcattcaattaatgatgtatat 26003514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 37195059 - 37195113
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| ||||||||||| || |||||||||||||| ||||||||| ||||||||    
T  37195059 tcactaatataagcaaaagttaatattttagattcactcaattaatgatgtatat 37195113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 38465922 - 38465868
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||| ||||||||| | || |||||||||||||||||||||| ||||||||    
T  38465922 tcactattgtaagcaaaaatctacattttagattcattcaattaatgatgtatat 38465868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 41824267 - 41824325
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||| || || ||||||||||||||||| ||| |||||| ||||    
T  41824267 atcactattataagcaaaaattcattttttagattcattcaataaattatgtatgtagt 41824325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 1961313 - 1961370
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||||| |||| ||||||||||  || ||||||| ||||||||    
T  1961313 cgatcactattataagcaaaaatttacattttagatttgtttaattaatgatgtatat 1961370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 26234157 - 26234112
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||    
T  26234157 tcactattataagcaaaagtttacattttagattcattcatttaat 26234112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 27331892 - 27331835
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| |  | |||||||||||||||||||||| |||||| ||||    
T  27331892 tcactattataagcaaaaatcaacattttagattcattcaattaatgatgtatgtagt 27331835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 29819903 - 29819854
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatg 55  Q
    |||||||||||||||||| | ||| ||||||||||||||| |||||||||    
T  29819903 tcactattataagcaaaaatctatgttttagattcattcatttaataatg 29819854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 38618528 - 38618475
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtata 59  Q
    ||||||||||||| |||| |||| |||||| |||||||||||||| ||||||||    
T  38618528 tcactattataaggaaaaatttacattttacattcattcaattaaaaatgtata 38618475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 42530499 - 42530552
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtata 59  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||| ||||||    
T  42530499 tcactattataagtaaaaatttacattttagattcatttaattaatattgtata 42530552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 44706172 - 44706115
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||| |||||| ||  |||||||||||| ||| ||||||||||||||    
T  44706172 cgatcactattataaacaaaacattgcattttagattcaatcagttaataatgtatat 44706115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 604870 - 604916
Alignment:
Q  11 attataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  604870 attataagcaaat-tttattttttagattcattcaattaataatgtat 604916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 8383192 - 8383243
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    |||| ||||||| ||||| | ||||||||||||||||||| |||||||||||    
T  8383192 tcaccattataaacaaaaatctatattttagattcattcatttaataatgta 8383243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 18731405 - 18731346
Alignment:
Q  5 atcactattataagcaaaactt-tatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||| || | | ||||||||||||||||| |||||||||| ||||    
T  18731405 atcactattataagcaaaagttcttttttttagattcattcaataaataatgtatgtagt 18731346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 31175093 - 31175140
Alignment:
Q  11 attataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||| |||  ||||||||||||||||||||||||||| ||||||    
T  31175093 attataagtaaatttttatattttagattcattcaattaatgatgtat 31175140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 38181891 - 38181836
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||   || |||||| ||||||||||||||| |||||||||||    
T  38181891 actattataagcaaaaaactacattttacattcattcaattaatgatgtatatagt 38181836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 38581014 - 38581065
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||||||| |||| | ||||||||| |||||||||||||||| ||||||||    
T  38581014 tattataagtaaaaatctatattttatattcattcaattaatattgtatata 38581065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 2050224 - 2050186
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcatt 43  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  2050224 atcattattataagcaaaactttttattttagattcatt 2050186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 15119910 - 15119856
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| | || |||||||||| ||||| ||||| ||||||||    
T  15119910 tcactattataagcaaaaatctacattttagatttattcatttaatgatgtatat 15119856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 31211242 - 31211272
Alignment:
Q  28 atattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||||||||||||||||    
T  31211242 atattttagattcattcaattaataatgtat 31211272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 43732149 - 43732199
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||| | || |||||||||||||||||||||| ||| ||||    
T  43732149 tattataagcaaaaatatacattttagattcattcaattaatgatgaatat 43732199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 45473403 - 45473345
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||| ||||||||||||| | |||||||||| |||||||||||||  || ||||||||    
T  45473403 atcaccattataagcaaaaatctatattttaggttcattcaattaacgatatatatagt 45473345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 8740526 - 8740571
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| | || |||||||||||||||| |||||    
T  8740526 tcactattataagcaaaaatctacattttagattcattcatttaat 8740571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 12116262 - 12116303
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||| ||| ||||||||||||||||| |||||    
T  12116262 tattataagcaaaattttgtattttagattcattcatttaat 12116303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 13994322 - 13994266
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||||  | |||||||||||||||| | ||| |||||||||||    
T  13994322 tcactattataagcaaaacta-acattttagattcattcattaaatgatgtatatagt 13994266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 15916744 - 15916797
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||| |  |||||||||||||||||| | |||||||||| ||||    
T  15916744 tattataagcaaaaatcaatattttagattcattcattaaataatgtatgtagt 15916797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 19612948 - 19612993
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||| ||||||||||| | ||||||||||||||||||| |||||    
T  19612948 tcactaatataagcaaaaatctatattttagattcattcatttaat 19612993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 26269407 - 26269374
Alignment:
Q  25 tttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||| ||||||||||||||    
T  26269407 tttatattttagattcatttaattaataatgtat 26269374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 32143413 - 32143450
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcatt 43  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  32143413 tcactattataagcaaaactttacattttaaattcatt 32143450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 32218687 - 32218654
Alignment:
Q  28 atattttagattcattcaattaataatgtatata 61  Q
    |||||||||||||||||||||||| |||||||||    
T  32218687 atattttagattcattcaattaatgatgtatata 32218654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 35438633 - 35438670
Alignment:
Q  14 ataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||| | |||||||||||||||||||||||||    
T  35438633 ataagcaaaaatctatattttagattcattcaattaat 35438670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 3098259 - 3098207
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| | || |||||||||||||||| | ||| ||||||    
T  3098259 tcactattataagcaaaaatctacattttagattcattcattaaatgatgtat 3098207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 3121429 - 3121481
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| |  |||||||||||||||| | | ||||||||||    
T  3121429 tcactattataagcaaaaatcaatattttagattcatttattaaataatgtat 3121481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 3121555 - 3121511
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaa 50  Q
    |||||||||||||||||| | || ||||||||| |||||||||||    
T  3121555 tcactattataagcaaaaatctacattttagatccattcaattaa 3121511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 11726628 - 11726576
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || | |||||||||||||||| | ||| ||||||    
T  11726628 tcactattataagcaaaaattaacattttagattcattcattaaatgatgtat 11726576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 15119784 - 15119836
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || | |||||||||||||||| | ||| ||||||    
T  15119784 tcactattataagcaaaaattaacattttagattcattcattaaatgatgtat 15119836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 19951576 - 19951524
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||| ||||| |  |||||||| ||||||||||||||| ||||||||    
T  19951576 actattataaacaaaaatcaatattttatattcattcaattaatgatgtatat 19951524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 25270989 - 25270937
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| | || |||||||||||||||| | ||| ||||||    
T  25270989 tcactattataagcaaaaatctacattttagattcattcattaaatgatgtat 25270937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 38594477 - 38594425
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| | ||| |||||||| |||||||||||| ||||||    
T  38594477 tcactaatataagcaaaaatctattttttagatacattcaattaatgatgtat 38594425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 38598073 - 38598021
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| | ||| |||||||| |||||||||||| ||||||    
T  38598073 tcactaatataagcaaaaatctattttttagatacattcaattaatgatgtat 38598021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 41057021 - 41056969
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| | || |||||||||||||||| | ||| ||||||    
T  41057021 tcactattataagcaaaaatctacattttagattcattcattaaatgatgtat 41056969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 45472414 - 45472474
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||| |||| ||||  ||||| ||||||||||| ||| |||||| ||||    
T  45472414 cgatcactattataagtaaaaatttactttttaaattcattcaataaatgatgtatgtagt 45472474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 4354 - 4408
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4354 tcactaatataagcaaaactttatattttagattcattcaattaataacgtatat 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 3511713 - 3511770
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||    
T  3511713 cgatcactaatataagcaaaactttacattttagattcattcaattaatgatgtatat 3511770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 35151794 - 35151737
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||    
T  35151794 tcactattataaacaaaactttgtattttagattcattcaattgatgatgtatatagt 35151737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 10308242 - 10308286
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaa 50  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  10308242 tcactgttataagcaaaactttatattttagattcattcaattaa 10308286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 16537268 - 16537323
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||||||||||  ||| |||||||||||| ||||||||||||    
T  16537268 cgatcactattataagcaaaactttgcattatagattcattcatttaataatgtat 16537323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 21142224 - 21142169
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  21142224 atcattattataagcaaaagtttatattttagattcatttaattaatgatgtatat 21142169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25138685 - 25138744
Alignment:
Q  1 tacgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| |||||||||||||||||||||| |||| ||||||||| |||||||| ||||||||    
T  25138685 tacggtcactattataagcaaaactttgtattatagattcatgcaattaatgatgtatat 25138744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 35425263 - 35425313
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||| |||||||||||||||| ||||| ||||||||    
T  35425263 tattataagcaaaactttaaattttagattcattcatttaatgatgtatat 35425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 40952477 - 40952427
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||    
T  40952477 tattataagcaaaaatttatattttagattcattcaattaaatatgtatat 40952427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 3669563 - 3669608
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||  |||||||||||||||||||||||||||    
T  3669563 tcactattataagcaaatatttatattttagattcattcaattaat 3669608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 50686141 - 50686084
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||| |||||||| | ||||||||||||||||||||||||||  ||||||||    
T  50686141 cgatcactatcataagcaacattttatattttagattcattcaattaacgatgtatat 50686084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 53176441 - 53176396
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||    
T  53176441 tcactattataagcaaaaatttatattttagattcattcagttaat 53176396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 4406370 - 4406322
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||||    
T  4406370 tattataagcaaaaatttatattttggattcattcaattaatgatgtat 4406322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 5816548 - 5816600
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||    
T  5816548 actattataagcaaaactttgtattttaaattcatttaattaatgatgtatat 5816600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 38298103 - 38298151
Alignment:
Q  12 ttataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  38298103 ttatacgcaaaattttatattttagattcattcaattaatgatgtatat 38298151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 19934774 - 19934719
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||| ||| ||||||    
T  19934774 cgatcactattataagcaaaaatctattttttagattcattcaataaatgatgtat 19934719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 26920805 - 26920754
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||| |||||    
T  26920805 tcactattataagtaaaactttgcattttagattcattcaattaatgatgta 26920754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 35151668 - 35151723
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||||| ||||||    
T  35151668 tcactattataagtaaaattttatattttagattcattcattaaataatatatata 35151723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 38539484 - 38539539
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||| ||| ||||||||    
T  38539484 atcactattataagcaaaaatttatattttaaatttattcaataaatgatgtatat 38539539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 4484085 - 4484135
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||| ||||||||  |||||||||||||||||||||| ||||||||    
T  4484085 tattataagtaaaactttgcattttagattcattcaattaatgatgtatat 4484135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 33376137 - 33376179
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattca 45  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  33376137 cgatcactattataagcaaaactttgcattttagattcattca 33376179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 33377547 - 33377493
Alignment:
Q  7 cactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||||| |||| |||  |||||||||||||||||||||| |||||||||    
T  33377547 cactattataagtaaaattttgcattttagattcattcaattaatgatgtatata 33377493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 36072577 - 36072631
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||||| |||  ||||||||||||||||||| || ||||||||    
T  36072577 tcactattataagcaaaattttgcattttagattcattcaatttatgatgtatat 36072631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 44755562 - 44755508
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||| ||||||||  |||||||||||||||| | ||||||||||||    
T  44755562 tcactattataagtaaaactttgcattttagattcattcattaaataatgtatat 44755508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 55416311 - 55416361
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||| |||| ||||||||| ||||||||||||||||| ||||||||    
T  55416311 tattataagtaaaaatttatatttgagattcattcaattaatgatgtatat 55416361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 12672451 - 12672500
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaata 52  Q
    |||||| |||||||| ||||| |||| |||||||||||||||||||||||    
T  12672451 cgatcattattataaacaaaaatttacattttagattcattcaattaata 12672500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 16170914 - 16170971
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| ||||||||||  ||||||||| ||||||||||||||||||||||  |||||||    
T  16170914 cgataactattataaaaaaaactttacattttagattcattcaattaatggtgtatat 16170971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 49481887 - 49481932
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||    
T  49481887 tcactattataagcaaaagtttacattttagattcattcatttaat 49481932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 54508183 - 54508228
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  54508183 tataagcaaaaatttatattttagattcattcaataaatgatgtat 54508228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 54713105 - 54713150
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||    
T  54713105 tcactattataagcaaaaatttacattttagattcattcatttaat 54713150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 55934647 - 55934704
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||| | | |||||||||||||||| | ||| |||||||||||    
T  55934647 tcactattataagcaaaacctaacattttagattcattcattaaatgatgtatatagt 55934704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 7740619 - 7740571
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  7740619 tattataagcaaaaatttatattttaaattcattaaattaatgatgtat 7740571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 13689669 - 13689617
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| || |  ||||||||||||||||||||||||||||    
T  13689669 tcactaatataagcaaaaattcactttttagattcattcaattaataatgtat 13689617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 14450961 - 14451009
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    ||||||||||||||||||||| | || |||||||||||||||| |||||    
T  14450961 cgatcactattataagcaaaaatctacattttagattcattcatttaat 14451009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 18423913 - 18423953
Alignment:
Q  20 aaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  18423913 aaaaatttatattttagattcattcaattaatgatgtatat 18423953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 20215692 - 20215640
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||| ||||||||| || |||||||||||||||||||| ||| ||||||    
T  20215692 tcactattttaagcaaaagttgatattttagattcattcaataaatgatgtat 20215640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 26636573 - 26636521
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||| |||| ||||| ||||||||||||||||| ||| ||||||    
T  26636573 tcactattataagtaaaaatttattttttagattcattcaataaatgatgtat 26636521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 29006842 - 29006894
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| | ||| ||||||||||||||||| ||| ||||||    
T  29006842 tcactattataagcaaaaatctattttttagattcattcaataaatgatgtat 29006894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 52914131 - 52914079
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || |||||||||||||||||| | ||| ||||||    
T  52914131 tcactattataagcaaaaattaatattttagattcattcattaaatgatgtat 52914079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 54164946 - 54164894
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| | ||| ||||||||||||||||| ||| ||||||    
T  54164946 tcactattataagcaaaaatctattttttagattcattcaataaatgatgtat 54164894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 6462844 - 6462793
Alignment:
Q  7 cactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| ||| ||||||    
T  6462844 cactattataaacaaaattttattttttagattcattcaataaatgatgtat 6462793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 18881479 - 18881432
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||| ||||| | || ||||||||||||||||||||||    
T  18881479 gatcactattataaccaaaaatatacattttagattcattcaattaat 18881432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 38716439 - 38716396
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||    
T  38716439 actattataaacaaaaatttacattttagattcattcaattaat 38716396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 48402543 - 48402492
Alignment:
Q  7 cactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||| | ||||||||||||||||||| | ||| ||||||    
T  48402543 cactattataagcaaaaatctatattttagattcattcattaaatgatgtat 48402492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 3094274 - 3094328
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||| ||||| ||||| ||||| ||||||||||| ||| ||||||||    
T  3094274 tcactattataaacaaaaatttattttttatattcattcaataaatgatgtatat 3094328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 26920679 - 26920717
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattc 44  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  26920679 tcactattataagcaaaattttgtattttagattcattc 26920717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 36786160 - 36786214
Alignment:
Q  9 ctattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||| ||||| |  | |||||||||||||||||||||| |||||||||||    
T  36786160 ctattataaacaaaaatcaacattttagattcattcaattaatgatgtatatagt 36786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 48603571 - 48603625
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||||||| | | ||||||||||||| ||||||||||| ||| ||||    
T  48603571 tcactattataagcaagaatctatattttagatttattcaattaatgatgcatat 48603625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 48995569 - 48995615
Alignment:
Q  12 ttataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||| ||||||||||||||||||| ||| ||||||||||    
T  48995569 ttataaacaaaattttatattttagattcatttaataaataatgtat 48995615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 3504083 - 3504136
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||| ||||| ||||| || || ||||||||||||||||||||| ||||||    
T  3504083 atcactaatataaacaaaaattcattttttagattcattcaattaatgatgtat 3504136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 4370404 - 4370461
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||| | ||||||||||| |  |||||||||||||||||||| ||| ||||||||    
T  4370404 cgatcacaaatataagcaaaaatccatattttagattcattcaataaatgatgtatat 4370461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 4708660 - 4708615
Alignment:
Q  15 taagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| |||| ||||||||||| ||||||| ||||||||||||||||    
T  4708660 taagaaaaaatttatattttaaattcatttaattaataatgtatat 4708615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 22768151 - 22768208
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||||  ||||||||||| |||| ||| | |||||||| ||||    
T  22768151 tcactattataagcaaaactccatattttagatacattgaataattaatgtatctagt 22768208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 23071413 - 23071458
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||| |||||||| |||| ||||||||||||||||||||| |||||    
T  23071413 tcacaattataagtaaaaatttatattttagattcattcatttaat 23071458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 23568513 - 23568456
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||  | | |||||||||||||||| | ||| |||||||||||    
T  23568513 tcactattataagcaaaaactaacattttagattcattcattaaatgatgtatatagt 23568456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 24331451 - 24331484
Alignment:
Q  25 tttatattttagattcattcaattaataatgtat 58  Q
    ||||| ||||||||||||||||||||||||||||    
T  24331451 tttattttttagattcattcaattaataatgtat 24331484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 33693981 - 33694030
Alignment:
Q  11 attataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||| |||  ||||||||||| |||||||||| ||||||||    
T  33693981 attataagcaaaattttgcattttagattcgttcaattaatgatgtatat 33694030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 38381983 - 38382020
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcatt 43  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  38381983 tcactattataagcaaaaatttacattttagattcatt 38382020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 41346474 - 41346511
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcatt 43  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  41346474 tcactattataagtaaaaatttatattttagattcatt 41346511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 46803411 - 46803472
Alignment:
Q  3 cgatcactattataagcaaaactt-tatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||| |||||||  |||| || ||||||||||||||||| ||||||| |||||||||||    
T  46803411 cgatcacaattataaataaaaattatatattttagattcattaaattaattatgtatatagt 46803472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 47308118 - 47308175
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||||| |  | ||||| |||||||||| ||||| ||||||||    
T  47308118 cgatcactattataagcaaaaatcaacattttggattcattcatttaatgatgtatat 47308175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 54106489 - 54106534
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||| || |||||||||||||||||||| ||| ||||||    
T  54106489 tataagcaaaaattcatattttagattcattcaataaatgatgtat 54106534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 54106601 - 54106556
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||| ||||| ||||||||||||||||| ||| ||||||    
T  54106601 tataagcaaaaatttatgttttagattcattcaataaatgatgtat 54106556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 54338955 - 54338918
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaat 47  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  54338955 tattataagcaaaaatttattttttagattcattcaat 54338918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 55936125 - 55936068
Alignment:
Q  1 tacgatcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||| |||||||||||||||||| |  |||||||||||||||||| | ||| ||||||    
T  55936125 tacggtcactattataagcaaaaatcaatattttagattcattcattaaatgatgtat 55936068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 12168641 - 12168693
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||| |||| |||| |||||| |||||| |||||||| ||||||    
T  12168641 tcactattataagtaaaaatttaaattttaaattcatacaattaatgatgtat 12168693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 13689543 - 13689595
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| | ||| |||||||| |||||||||||| ||||||    
T  13689543 tcactaatataagcaaaaatctattttttagatacattcaattaatgatgtat 13689595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 17658043 - 17657999
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaat 47  Q
    |||||| | ||||||| |||||||||| |||||||||||||||||    
T  17658043 cgatcattgttataagtaaaactttattttttagattcattcaat 17657999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 19597066 - 19597014
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||| ||||| ||||||| ||||||| |||||| |||| ||||||    
T  19597066 tcactattataaacaaaaatttatatattagattaattcaactaatgatgtat 19597014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 20215574 - 20215626
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || | ||||||| |||||||||| ||| ||||||    
T  20215574 tcactattataagcaaaaattgacattttaggttcattcaataaatgatgtat 20215626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 35005188 - 35005136
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||| |||||||||||| || |  ||||||||||||||||| ||||||||||    
T  35005188 tcactgttataagcaaaaattcaatttttagattcattcaataaataatgtat 35005136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 37255689 - 37255741
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| ||  | ||||||||||||||||| ||| ||||||    
T  37255689 tcactattataagcaaaagttggttttttagattcattcaataaatgatgtat 37255741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 58
Target Start/End: Original strand, 38938072 - 38938100
Alignment:
Q  30 attttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||||||||||||||    
T  38938072 attttagattcattcaattaataatgtat 38938100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 24615 - 24667
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  24615 actaatataagcaaaacattatattttagattcattcaattaataacgtatat 24667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 24739 - 24687
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || |||||||||||||||||| | ||| ||||||    
T  24739 tcactattataagcaaaaattaatattttagattcattcattaaatgatgtat 24687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 2943345 - 2943293
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  2943345 tcactattataagcaaaaaattatattttacattcattcaattaataatgtat 2943293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 30138924 - 30138864
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||| ||||||| |||| |||| |||||||||||||||||||||| |||||||||||    
T  30138924 cgatcactgttataagtaaaaatttacattttagattcattcaattaatgatgtatatagt 30138864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 21886478 - 21886525
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgta 57  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  21886478 tattataagcaaaaatttatattttagattcattcaattaatgatgta 21886525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 22752574 - 22752621
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  22752574 tataagcaaaaatttatattttagattcattcaataaataatgtatat 22752621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 31813418 - 31813472
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||| ||||||||    
T  31813418 tcactattataaacaaaaatttacattttagattcattcaattaatgatgtatat 31813472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 6455553 - 6455601
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||    
T  6455553 cgatcactattataagcaaaaatttacattttagattcattcatttaat 6455601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 45002083 - 45002131
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataat 54  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  45002083 tcactattataaacaaaactttacattttaaattcattcaattaataat 45002131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 9930399 - 9930450
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||| ||||| ||||||||||||||||||| ||||||| |||||||||    
T  9930399 tattataaacaaaaatttatattttagattcatttaattaattatgtatata 9930450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 37101832 - 37101777
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||||||| ||||||| ||||||||||||||||| | |||| ||||||||    
T  37101832 tcactattataagccaaactttgtattttagattcattcattaaatattgtatata 37101777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 43103205 - 43103150
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||||||||||| |||| ||||||||||||||| ||| ||||||| |||||||||    
T  43103205 tcactattataagtaaaattttatattttagatttatttaattaatgatgtatata 43103150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 48440066 - 48440015
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaataatg 55  Q
    |||||||||||||||||||| || ||||||||| |||||||||| |||||||    
T  48440066 gatcactattataagcaaaaattaatattttaggttcattcaataaataatg 48440015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 24617803 - 24617861
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||| |||||||| ||||| | ||| ||||||||||||||||| |||||||||||||||    
T  24617803 atcagtattataaacaaaaatgtattttttagattcattcaataaataatgtatatagt 24617861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 6847280 - 6847337
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||||||||| |||  |||||| ||| ||||||||||| ||||||||    
T  6847280 cgatcactattataagcaaaaatttgcattttatatttattcaattaatgatgtatat 6847337  T

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Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 26477297 - 26477240
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||| ||||| ||||||||| ||||| ||| ||||||| ||||||||    
T  26477297 cgatcactattataaacaaaaatttatatttaagatttatttaattaatgatgtatat 26477240  T

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Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 26553737 - 26553680
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||||||||| ||||| ||||||||| ||||| ||| ||||||| ||||||||    
T  26553737 cgatcactattataaacaaaaatttatatttaagatttatttaattaatgatgtatat 26553680  T

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Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 44416658 - 44416613
Alignment:
Q  13 tataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  44416658 tataaacaaaaatttatattttagattcattcaattaattatgtat 44416613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 9555389 - 9555341
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||||||||| |||||||||||||||| | ||| ||||||    
T  9555389 tattataagcaaaactttacattttagattcattcattaaatgatgtat 9555341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 23797481 - 23797429
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||||||||| |||| |||  |||||||||||||||||||||| ||||||    
T  23797481 tcactattataagtaaaattttgcattttagattcattcaattaatgatgtat 23797429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 28321569 - 28321625
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||| ||||||||| || | |||||||||||||||||| ||| ||||||||    
T  28321569 gatcactattgtaagcaaaaattaacattttagattcattcaataaattatgtatat 28321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 2533949 - 2533988
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaat 47  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  2533949 actattataagcaaaaatttatattttagatttattcaat 2533988  T

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Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 3882816 - 3882859
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||| ||||| || ||||||||||||||||||||||||    
T  3882816 actattataaacaaaaattaatattttagattcattcaattaat 3882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 21586944 - 21586893
Alignment:
Q  9 ctattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||| |||| |  |||||||||||||||||||||||| ||||||||    
T  21586944 ctattataagtaaaaatcaatattttagattcattcaattaatgatgtatat 21586893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 24280954 - 24280899
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||||||||||| |||| | || |||||| ||||||||||||||| |||||||||    
T  24280954 tcactattataagtaaaaatctacattttaaattcattcaattaatgatgtatata 24280899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 25814813 - 25814758
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||| ||||||| || |||||||||| ||||| ||||||||||| |||||    
T  25814813 actattataaacaaaactctacattttagatttattcatttaataatgtacatagt 25814758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 32490601 - 32490648
Alignment:
Q  11 attataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    ||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  32490601 attataaacaaaactttacattttagattcatttaattaatgatgtat 32490648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 33935027 - 33935062
Alignment:
Q  28 atattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| |||||||||||||||||    
T  33935027 atattttagattcattcatttaataatgtatatagt 33935062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 34840797 - 34840746
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataat 54  Q
    ||||||||||||||||||||| || | ||||||| |||||||||| ||||||    
T  34840797 cgatcactattataagcaaaagttgacattttaggttcattcaataaataat 34840746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 37489535 - 37489570
Alignment:
Q  19 caaaactttatattttagattcattcaattaataat 54  Q
    ||||| ||||||||||||||||||||||||||||||    
T  37489535 caaaaatttatattttagattcattcaattaataat 37489570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 39380615 - 39380670
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||| ||||| ||||||||||||||||||| ||| |||||| ||| ||||    
T  39380615 actattataaacaaaattttatattttagattcatttaataaataatatatgtagt 39380670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 43250472 - 43250417
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||||||||||||||||  |||||||| |||| ||| | |||||||||||    
T  43250472 tcactattataagcaaaactttactttttagatacattgaataattaatgtatata 43250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 4089910 - 4089868
Alignment:
Q  18 gcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||    
T  4089910 gcaaaaatttatattttatattcattcaattaatgatgtatat 4089868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 23324792 - 23324846
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    |||||||||||| |||||||||||  |||| ||||||||||| ||| ||||||||    
T  23324792 tcactattataaacaaaactttatcatttacattcattcaataaattatgtatat 23324846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 46718058 - 46718116
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    |||||||||||||||  |||| |||| |||||||||| | |||||||||||| ||||||    
T  46718058 cgatcactattataaataaaattttacattttagatttagtcaattaataatatatata 46718116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 5950327 - 5950270
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||||||||  | | |||||||||||||||| | ||| |||||||||||    
T  5950327 tcactattataagcaaaaactaacattttagattcattcattaaatgatgtatatagt 5950270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 9555267 - 9555324
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||| ||||| |||| |||| |||||| ||| ||||||||||| |||||||||||    
T  9555267 tcactatcataagtaaaattttacattttaaatttattcaattaatgatgtatatagt 9555324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 12088944 - 12088887
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||||||| |||| |||  |||| |||||||||||||||||  ||||||||||    
T  12088944 tcactattataagtaaaattttgcatttaagattcattcaattaatgttgtatatagt 12088887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 23797355 - 23797412
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||| |||  |||||||||||||||| | ||| |||||| ||||    
T  23797355 tcactattataagcaaaattttgcattttagattcattcattaaatgatgtatgtagt 23797412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 38940231 - 38940276
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatg 55  Q
    |||||||||||||| || | |||||||||||||||||| |||||||    
T  38940231 tattataagcaaaaattgacattttagattcattcaataaataatg 38940276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 41106093 - 41106146
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||| |||| ||||| | ||||||||| ||||||| |||||||||||||||||    
T  41106093 actataataaacaaaaatctatattttaaattcatttaattaataatgtatata 41106146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 43813132 - 43813173
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaat 47  Q
    |||||||||||||||||| ||||  |||||||||||||||||    
T  43813132 tcactattataagcaaaaatttaatttttagattcattcaat 43813173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 45531960 - 45532013
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    ||||||||  |||| ||||||||||||||| ||| ||||| |||||||||||||    
T  45531960 tattataaataaaaatttatattttagattaatttaattactaatgtatatagt 45532013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 1706840 - 1706892
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| |||||| |||| ||||| |||||||| |||||||||||| ||||||    
T  1706840 tcactaatataagtaaaaatttattttttagatacattcaattaatgatgtat 1706892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 63
Target Start/End: Complemental strand, 2534044 - 2534016
Alignment:
Q  35 agattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||||||||||||||||    
T  2534044 agattcattcaattaataatgtatatagt 2534016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 7701195 - 7701247
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| | || |||||||||||||||| | ||| ||||||    
T  7701195 tcactattataagcaaaaatctacattttagattcattcattaaatgatgtat 7701247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 10095726 - 10095778
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| || | |||||||||||||||| | ||| ||||||    
T  10095726 tcactattataagcaaaaattaacattttagattcattcattaaatgatgtat 10095778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 22281933 - 22281885
Alignment:
Q  10 tattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||||||||| ||||||||||| ||||| | ||| ||||||    
T  22281933 tattataagcaaaactttgtattttagatttattcattaaatgatgtat 22281885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 31319652 - 31319592
Alignment:
Q  3 cgatcactattataagcaaaactttatattttagattcattcaattaataatgtatatagt 63  Q
    |||||||||||||||| |||| | ||| ||||||||||||||||  ||| |||||| ||||    
T  31319652 cgatcactattataaggaaaaatatattttttagattcattcaaaaaatgatgtatgtagt 31319592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 37930831 - 37930779
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||||| ||||| || ||||||||||||||||  || ||||||||||    
T  37930831 tcactattataaacaaaaattaatattttagattcatttgataaataatgtat 37930779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 41872184 - 41872132
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| | || |||||||||||||||| ||||| ||||||    
T  41872184 tcactaatataagcaaaaatctacattttagattcattcatttaatgatgtat 41872132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 44406428 - 44406468
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattc 44  Q
    |||||||||||||||||||| ||| ||||||||||| ||||    
T  44406428 gatcactattataagcaaaattttgtattttagatttattc 44406468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 146098 - 146047
Alignment:
Q  9 ctattataagcaaaactttatattttagattcattcaattaataatgtatat 60  Q
    ||||||||| ||||| |||  |||||||||||||||||||||| ||||||||    
T  146098 ctattataaacaaaaatttgcattttagattcattcaattaatgatgtatat 146047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 7790 - 7745
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    |||||||||||||||||| | || |||||||||||||||| |||||    
T  7790 tcactattataagcaaaaatctacattttagattcattcatttaat 7745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 2426 - 2472
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    ||||||||||||||||||| |||| || ||||||||||||| |||||    
T  2426 atcactattataagcaaaaatttacatcttagattcattcatttaat 2472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 10081 - 10127
Alignment:
Q  5 atcactattataagcaaaactttatattttagattcattcaattaat 51  Q
    ||||||||||||||||||| |||| || ||||||||||||| |||||    
T  10081 atcactattataagcaaaaatttacatcttagattcattcatttaat 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 88985 - 88935
Alignment:
Q  8 actattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||||||| ||||| | ||||||||| ||||||||||||||| ||||||    
T  88985 actattataaacaaaaatctatattttatattcattcaattaatgatgtat 88935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 23603 - 23660
Alignment:
Q  4 gatcactattataagcaaaactttatattttagattcattcaattaataatgtatata 61  Q
    ||||| |||||||||||||| |||| |||| ||||||||| || ||||||| ||||||    
T  23603 gatcattattataagcaaaaatttacatttaagattcatttaactaataatatatata 23660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 120278 - 120226
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| ||||  |||||||| |||||||||||| ||||||    
T  120278 tcactaatataagcaaaaatttactttttagatacattcaattaatgatgtat 120226  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 246802 - 246854
Alignment:
Q  6 tcactattataagcaaaactttatattttagattcattcaattaataatgtat 58  Q
    |||||| ||||||||||| ||||  |||||||| |||||||||||| ||||||    
T  246802 tcactaatataagcaaaaatttactttttagatacattcaattaatgatgtat 246854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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