View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18234_high_37 (Length: 201)
Name: NF18234_high_37
Description: NF18234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18234_high_37 |
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Alignment Details
Target: chr8 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 14854367 - 14854195
Alignment:
| Q |
18 |
ctttgtgatatctacgtgtttaaggatagaatcaaaaagtggttacatatcaaatcctcacaaagttcaatcaatatatataagggacattacaacaggg |
117 |
Q |
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| T |
14854367 |
ctttgtgagatctacgtgtttaaggatagaatcaaaaagtggttacatatcaaatcctcactaagttcaatcaatatatataaaggacattacaataggg |
14854268 |
T |
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| Q |
118 |
aagctatgcatttcatgattattaaccgcatataccacctaaactacgccctttttgttctgcttcttctcac |
190 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||| |
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| T |
14854267 |
aagctatgcatttcatgattattaactgcatataccacctaaactacgtcctttctgttctgcttcttatcac |
14854195 |
T |
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