View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18234_low_24 (Length: 267)
Name: NF18234_low_24
Description: NF18234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18234_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 6040677 - 6040529
Alignment:
| Q |
103 |
tgattagactcaaacggttaacgaactttcacttaaagcgcaaaccattcaggaacaattcttaaaacatattttacacttacctcacaatcgaactcta |
202 |
Q |
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| T |
6040677 |
tgattagactcaaacggttaacgaactttcacttaaagcgcaaaccattcaggaacaattcttaaaacatattttacacttacctcacaatcgaactcta |
6040578 |
T |
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| Q |
203 |
aattagcaaagccccttcccaaaccggaaggtttaacaacgaaaaaatg |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6040577 |
aattagcaaagccccttcccaaaccggaaggtttaacaacgaaaaaatg |
6040529 |
T |
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