View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18234_low_25 (Length: 261)

Name: NF18234_low_25
Description: NF18234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18234_low_25
NF18234_low_25
[»] chr8 (73 HSPs)
chr8 (1-261)||(31689802-31690060)
chr8 (93-261)||(40422379-40422546)
chr8 (94-261)||(7612-7778)
chr8 (98-261)||(29190378-29190540)
chr8 (95-261)||(9632328-9632493)
chr8 (93-261)||(43866709-43866876)
chr8 (94-261)||(25287791-25287957)
chr8 (94-261)||(36623572-36623738)
chr8 (94-261)||(40525506-40525672)
chr8 (96-250)||(22763596-22763749)
chr8 (88-261)||(20096013-20096185)
chr8 (97-261)||(15716095-15716258)
chr8 (95-258)||(547657-547819)
chr8 (94-261)||(11478144-11478310)
chr8 (85-261)||(37343001-37343176)
chr8 (98-261)||(37713699-37713861)
chr8 (95-261)||(23424512-23424677)
chr8 (83-261)||(23514009-23514186)
chr8 (98-261)||(13566413-13566575)
chr8 (94-261)||(41251122-41251288)
chr8 (95-198)||(43866993-43867095)
chr8 (95-198)||(23424794-23424896)
chr8 (97-261)||(26739714-26739881)
chr8 (93-198)||(27857024-27857128)
chr8 (89-198)||(40422154-40422262)
chr8 (97-198)||(41801818-41801918)
chr8 (102-198)||(38619805-38619900)
chr8 (94-180)||(9632603-9632688)
chr8 (96-261)||(41802035-41802194)
chr8 (94-198)||(36623351-36623454)
chr8 (94-198)||(37342781-37342884)
chr8 (94-198)||(41182178-41182281)
chr8 (95-190)||(24529946-24530040)
chr8 (95-196)||(547431-547530)
chr8 (188-261)||(40933267-40933340)
chr8 (98-198)||(35163500-35163599)
chr8 (98-198)||(41251408-41251507)
chr8 (150-261)||(24529732-24529841)
chr8 (96-198)||(26739999-26740101)
chr8 (116-198)||(11478427-11478508)
chr8 (209-261)||(35163721-35163773)
chr8 (95-142)||(9632472-9632519)
chr8 (106-185)||(20096319-20096397)
chr8 (96-163)||(23424636-23424702)
chr8 (97-196)||(31690180-31690277)
chr8 (114-200)||(27437515-27437600)
chr8 (96-142)||(41182040-41182086)
chr8 (96-158)||(41251252-41251313)
chr8 (93-198)||(7391-7495)
chr8 (95-164)||(23514144-23514212)
chr8 (93-198)||(29190158-29190262)
chr8 (220-261)||(38619824-38619865)
chr8 (93-198)||(40525789-40525893)
chr8 (97-142)||(41802011-41802056)
chr8 (98-142)||(15716072-15716116)
chr8 (98-198)||(22763878-22763977)
chr8 (114-214)||(27436582-27436681)
chr8 (141-261)||(27856787-27856907)
chr8 (95-163)||(40422354-40422420)
chr8 (95-198)||(38600232-38600334)
chr8 (96-142)||(11478289-11478335)
chr8 (97-163)||(25287916-25287981)
chr8 (96-142)||(29190353-29190399)
chr8 (96-142)||(37342976-37343022)
chr8 (220-261)||(547752-547793)
chr8 (220-261)||(9632354-9632395)
chr8 (220-261)||(15716193-15716234)
chr8 (220-261)||(22763621-22763662)
chr8 (220-261)||(40422477-40422518)
chr8 (220-261)||(41251149-41251190)
chr8 (95-163)||(22763719-22763786)
chr8 (96-140)||(27856888-27856932)
chr8 (114-214)||(38598983-38599082)
[»] chr1 (73 HSPs)
chr1 (93-261)||(33030332-33030499)
chr1 (84-261)||(49003094-49003270)
chr1 (94-260)||(739218-739383)
chr1 (94-261)||(8890428-8890594)
chr1 (95-261)||(5183725-5183890)
chr1 (93-261)||(19755624-19755791)
chr1 (86-261)||(12577231-12577405)
chr1 (95-261)||(46849877-46850042)
chr1 (92-261)||(33347635-33347803)
chr1 (93-261)||(1040296-1040463)
chr1 (93-261)||(1047202-1047369)
chr1 (94-261)||(24701489-24701654)
chr1 (94-261)||(48380680-48380846)
chr1 (96-261)||(37152757-37152921)
chr1 (94-261)||(6056375-6056541)
chr1 (95-261)||(2953683-2953848)
chr1 (91-261)||(25415063-25415232)
chr1 (96-261)||(26953320-26953484)
chr1 (94-261)||(30830350-30830514)
chr1 (96-261)||(29980857-29981021)
chr1 (95-245)||(5926756-5926905)
chr1 (114-250)||(46544961-46545096)
chr1 (103-261)||(46364794-46364951)
chr1 (140-257)||(52454978-52455095)
chr1 (150-261)||(10019592-10019703)
chr1 (94-261)||(35312195-35312361)
chr1 (92-197)||(6334653-6334757)
chr1 (98-198)||(49002879-49002978)
chr1 (178-257)||(6334902-6334981)
chr1 (93-198)||(8890210-8890313)
chr1 (92-198)||(26953098-26953203)
chr1 (94-198)||(12577009-12577112)
chr1 (82-198)||(29043037-29043152)
chr1 (94-198)||(33030617-33030719)
chr1 (98-261)||(29042759-29042920)
chr1 (100-198)||(5926524-5926621)
chr1 (94-196)||(24701269-24701370)
chr1 (92-198)||(25414841-25414946)
chr1 (121-234)||(49989821-49989933)
chr1 (98-198)||(29980642-29980741)
chr1 (96-198)||(5183507-5183608)
chr1 (160-261)||(51933993-51934095)
chr1 (98-143)||(35312172-35312217)
chr1 (93-198)||(46364572-46364676)
chr1 (94-198)||(1047486-1047589)
chr1 (95-198)||(2953464-2953566)
chr1 (96-191)||(52454757-52454851)
chr1 (101-198)||(37152544-37152640)
chr1 (95-198)||(6056660-6056763)
chr1 (94-198)||(33347415-33347518)
chr1 (95-198)||(739500-739602)
chr1 (95-142)||(49990133-49990180)
chr1 (97-163)||(33030458-33030523)
chr1 (220-261)||(1047521-1047562)
chr1 (93-198)||(48380965-48381069)
chr1 (98-198)||(35311977-35312076)
chr1 (96-163)||(5183700-5183766)
chr1 (95-142)||(24701463-24701510)
chr1 (131-198)||(37152469-37152535)
chr1 (96-163)||(46364769-46364835)
chr1 (96-142)||(29980832-29980878)
chr1 (96-142)||(33347610-33347656)
chr1 (219-261)||(35312000-35312042)
chr1 (219-261)||(46544786-46544828)
chr1 (220-261)||(2953781-2953822)
chr1 (220-261)||(5926545-5926586)
chr1 (220-261)||(24701296-24701337)
chr1 (220-261)||(37152855-37152896)
chr1 (220-261)||(46364600-46364641)
chr1 (220-261)||(48380707-48380748)
chr1 (98-142)||(26953297-26953341)
chr1 (221-261)||(33030360-33030400)
chr1 (98-142)||(34176119-34176163)
[»] chr4 (60 HSPs)
chr4 (96-261)||(37678067-37678231)
chr4 (94-261)||(8286931-8287097)
chr4 (98-261)||(35730880-35731042)
chr4 (94-261)||(54961430-54961596)
chr4 (91-261)||(22249952-22250121)
chr4 (95-261)||(12691406-12691571)
chr4 (96-261)||(32846363-32846527)
chr4 (95-245)||(19916891-19917040)
chr4 (95-261)||(47862152-47862317)
chr4 (94-252)||(50246085-50246243)
chr4 (97-261)||(27813051-27813213)
chr4 (97-261)||(47980687-47980850)
chr4 (95-261)||(33294144-33294309)
chr4 (86-258)||(20600937-20601109)
chr4 (95-233)||(13872316-13872453)
chr4 (131-261)||(26601295-26601424)
chr4 (99-261)||(34238474-34238635)
chr4 (94-198)||(8287215-8287318)
chr4 (94-198)||(53559669-53559772)
chr4 (150-261)||(53559441-53559552)
chr4 (94-198)||(22249732-22249835)
chr4 (95-198)||(47981918-47982020)
chr4 (93-198)||(50245855-50245959)
chr4 (87-198)||(37677839-37677950)
chr4 (179-261)||(20086656-20086738)
chr4 (92-198)||(47862434-47862538)
chr4 (93-198)||(33294425-33294529)
chr4 (98-198)||(12691687-12691786)
chr4 (95-198)||(13872069-13872171)
chr4 (92-198)||(20086434-20086539)
chr4 (187-261)||(48507505-48507579)
chr4 (106-198)||(19916667-19916758)
chr4 (151-261)||(489402-489513)
chr4 (151-261)||(515194-515305)
chr4 (95-142)||(27813192-27813239)
chr4 (95-163)||(37678041-37678108)
chr4 (98-198)||(48507699-48507798)
chr4 (105-208)||(45199137-45199239)
chr4 (219-261)||(19916972-19917014)
chr4 (220-261)||(48507734-48507775)
chr4 (97-198)||(54961713-54961813)
chr4 (95-163)||(8287056-8287123)
chr4 (221-261)||(34238781-34238821)
chr4 (94-142)||(35730661-35730709)
chr4 (96-163)||(47862276-47862342)
chr4 (96-163)||(47980809-47980875)
chr4 (95-141)||(489376-489422)
chr4 (95-141)||(515168-515214)
chr4 (220-261)||(19916682-19916723)
chr4 (220-261)||(20086463-20086504)
chr4 (220-261)||(22249759-22249800)
chr4 (95-184)||(27813349-27813436)
chr4 (220-261)||(35730978-35731019)
chr4 (220-261)||(37677874-37677915)
chr4 (220-261)||(45199153-45199194)
chr4 (220-261)||(47862178-47862219)
chr4 (220-261)||(47981953-47981994)
chr4 (220-261)||(54961457-54961498)
chr4 (95-163)||(19740860-19740927)
chr4 (95-163)||(35730854-35730921)
[»] chr7 (48 HSPs)
chr7 (85-261)||(20947183-20947358)
chr7 (95-260)||(5280491-5280655)
chr7 (93-261)||(43938113-43938280)
chr7 (89-261)||(12928258-12928429)
chr7 (94-261)||(5636026-5636190)
chr7 (98-261)||(27557851-27558013)
chr7 (94-261)||(34454699-34454865)
chr7 (94-261)||(37563573-37563739)
chr7 (83-261)||(12929473-12929650)
chr7 (165-261)||(15827940-15828036)
chr7 (150-261)||(19980004-19980115)
chr7 (94-261)||(26825849-26826015)
chr7 (160-261)||(45586590-45586691)
chr7 (106-261)||(12930957-12931111)
chr7 (96-198)||(25049443-25049544)
chr7 (91-199)||(5280268-5280375)
chr7 (153-261)||(47082066-47082174)
chr7 (91-198)||(37563350-37563456)
chr7 (98-261)||(44545814-44545976)
chr7 (98-261)||(47121281-47121442)
chr7 (95-198)||(27558134-27558236)
chr7 (94-198)||(26825629-26825732)
chr7 (91-198)||(43937890-43937996)
chr7 (98-196)||(26830025-26830122)
chr7 (96-198)||(47121560-47121661)
chr7 (89-198)||(34454478-34454586)
chr7 (94-199)||(7159210-7159313)
chr7 (98-198)||(35262629-35262728)
chr7 (97-158)||(44545597-44545657)
chr7 (98-198)||(5636307-5636406)
chr7 (94-198)||(12928036-12928138)
chr7 (95-163)||(15827914-15827981)
chr7 (95-163)||(27557972-27558039)
chr7 (97-163)||(12929449-12929514)
chr7 (221-261)||(34454798-34454838)
chr7 (94-198)||(47081846-47081949)
chr7 (96-163)||(19980074-19980140)
chr7 (96-163)||(34454674-34454740)
chr7 (95-158)||(44545788-44545850)
chr7 (219-261)||(26825656-26825698)
chr7 (220-261)||(5280588-5280629)
chr7 (220-261)||(7159245-7159286)
chr7 (98-183)||(19980190-19980274)
chr7 (220-261)||(34454510-34454551)
chr7 (90-198)||(12929282-12929389)
chr7 (90-198)||(12930767-12930874)
chr7 (98-142)||(47082043-47082087)
chr7 (221-261)||(47121596-47121636)
[»] chr6 (63 HSPs)
chr6 (98-261)||(32337567-32337729)
chr6 (91-261)||(13480204-13480373)
chr6 (93-261)||(7612546-7612713)
chr6 (98-261)||(19296446-19296608)
chr6 (94-261)||(26542613-26542782)
chr6 (96-257)||(3299782-3299942)
chr6 (96-261)||(23291745-23291909)
chr6 (98-261)||(5064554-5064716)
chr6 (98-261)||(31879461-31879622)
chr6 (95-261)||(737916-738081)
chr6 (148-261)||(26503416-26503529)
chr6 (96-261)||(3586430-3586591)
chr6 (95-261)||(21880583-21880748)
chr6 (121-261)||(1066358-1066497)
chr6 (93-261)||(31386797-31386963)
chr6 (98-261)||(20774092-20774254)
chr6 (91-261)||(20561146-20561314)
chr6 (91-196)||(3299555-3299659)
chr6 (94-179)||(16704610-16704694)
chr6 (121-261)||(22493907-22494045)
chr6 (94-198)||(26503636-26503739)
chr6 (108-198)||(9607598-9607687)
chr6 (97-198)||(7612831-7612931)
chr6 (94-198)||(22494162-22494264)
chr6 (94-198)||(32337849-32337951)
chr6 (93-198)||(5064333-5064437)
chr6 (93-198)||(13480490-13480594)
chr6 (94-199)||(16706933-16707036)
chr6 (93-198)||(30234874-30234978)
chr6 (94-198)||(15819772-15819875)
chr6 (94-198)||(20560927-20561030)
chr6 (95-198)||(20994973-20995075)
chr6 (95-198)||(23292026-23292128)
chr6 (101-198)||(31393465-31393561)
chr6 (92-192)||(18865117-18865216)
chr6 (94-198)||(20774363-20774466)
chr6 (95-142)||(31386942-31386989)
chr6 (93-198)||(3586210-3586313)
chr6 (97-142)||(5064530-5064575)
chr6 (95-196)||(20994819-20994918)
chr6 (220-261)||(20994845-20994886)
chr6 (221-261)||(1066457-1066497)
chr6 (221-261)||(21544544-21544584)
chr6 (95-163)||(26542741-26542808)
chr6 (95-142)||(3586404-3586451)
chr6 (95-142)||(21544518-21544565)
chr6 (95-198)||(21880364-21880466)
chr6 (96-163)||(23291868-23291934)
chr6 (96-198)||(26542902-26543003)
chr6 (96-142)||(32337708-32337754)
chr6 (97-142)||(7612692-7612737)
chr6 (220-261)||(8427226-8427267)
chr6 (220-261)||(13480525-13480566)
chr6 (220-261)||(15819807-15819848)
chr6 (98-163)||(19296423-19296487)
chr6 (220-261)||(21880390-21880431)
chr6 (220-261)||(22493907-22493948)
chr6 (220-261)||(23292061-23292102)
chr6 (220-261)||(32337590-32337631)
chr6 (221-261)||(7612574-7612614)
chr6 (221-261)||(20774399-20774439)
chr6 (221-261)||(26542938-26542978)
chr6 (94-198)||(31879740-31879843)
[»] chr2 (57 HSPs)
chr2 (91-261)||(22309650-22309819)
chr2 (93-261)||(9693961-9694128)
chr2 (93-261)||(28599425-28599592)
chr2 (94-261)||(20911129-20911295)
chr2 (94-261)||(16367182-16367346)
chr2 (121-261)||(41846611-41846750)
chr2 (95-261)||(17366626-17366791)
chr2 (94-261)||(1149936-1150102)
chr2 (98-261)||(9959044-9959206)
chr2 (95-261)||(17580328-17580493)
chr2 (95-261)||(32519155-32519320)
chr2 (95-261)||(5608813-5608978)
chr2 (94-261)||(22731751-22731917)
chr2 (93-243)||(18477113-18477262)
chr2 (95-261)||(45663727-45663892)
chr2 (93-261)||(8089450-8089617)
chr2 (95-196)||(10446832-10446932)
chr2 (94-191)||(17580613-17580710)
chr2 (94-198)||(22309430-22309533)
chr2 (101-233)||(37984733-37984864)
chr2 (182-250)||(43682087-43682155)
chr2 (180-250)||(4375633-4375703)
chr2 (93-198)||(4375833-4375937)
chr2 (94-198)||(16366962-16367065)
chr2 (94-198)||(32519437-32519540)
chr2 (93-198)||(41846390-41846494)
chr2 (98-198)||(18476910-18477009)
chr2 (94-198)||(43681855-43681958)
chr2 (94-234)||(17284742-17284873)
chr2 (94-198)||(1150219-1150322)
chr2 (95-198)||(9693742-9693844)
chr2 (95-198)||(9958826-9958927)
chr2 (95-198)||(20911412-20911513)
chr2 (95-142)||(28599571-28599618)
chr2 (93-163)||(45663699-45663768)
chr2 (95-198)||(28599709-28599811)
chr2 (95-196)||(17285019-17285119)
chr2 (95-163)||(5608787-5608854)
chr2 (95-163)||(17366750-17366817)
chr2 (98-198)||(19606920-19607019)
chr2 (94-198)||(37985009-37985112)
chr2 (95-163)||(41846585-41846652)
chr2 (96-163)||(20911254-20911320)
chr2 (95-142)||(22309624-22309671)
chr2 (95-142)||(22731725-22731772)
chr2 (96-163)||(32519279-32519345)
chr2 (220-261)||(1149963-1150004)
chr2 (220-261)||(5608911-5608952)
chr2 (220-261)||(9694059-9694100)
chr2 (220-261)||(16366989-16367030)
chr2 (220-261)||(17284769-17284810)
chr2 (98-163)||(17580452-17580516)
chr2 (220-261)||(20911156-20911197)
chr2 (220-261)||(28599453-28599494)
chr2 (95-143)||(9959018-9959066)
chr2 (221-261)||(19607173-19607213)
chr2 (221-261)||(22309749-22309789)
[»] chr3 (53 HSPs)
chr3 (92-261)||(33989012-33989178)
chr3 (98-261)||(33457919-33458081)
chr3 (93-261)||(10749316-10749483)
chr3 (97-261)||(30803848-30804011)
chr3 (98-261)||(55036672-55036834)
chr3 (98-261)||(24576291-24576455)
chr3 (96-261)||(21255750-21255914)
chr3 (92-261)||(22129003-22129171)
chr3 (93-261)||(28310567-28310734)
chr3 (95-261)||(53037027-53037192)
chr3 (100-261)||(40256879-40257039)
chr3 (121-261)||(30890233-30890372)
chr3 (92-261)||(11312954-11313120)
chr3 (94-261)||(30654702-30654864)
chr3 (94-242)||(38642898-38643041)
chr3 (91-198)||(55036951-55037057)
chr3 (86-198)||(1741378-1741489)
chr3 (91-261)||(21300352-21300521)
chr3 (116-261)||(46670474-46670618)
chr3 (90-198)||(46670243-46670350)
chr3 (96-198)||(33458200-33458301)
chr3 (93-198)||(10749678-10749782)
chr3 (94-142)||(35432405-35432453)
chr3 (95-163)||(35432475-35432542)
chr3 (169-261)||(51279449-51279541)
chr3 (96-261)||(10997878-10998039)
chr3 (96-198)||(10998155-10998256)
chr3 (96-198)||(30804130-30804231)
chr3 (205-261)||(1741606-1741662)
chr3 (94-198)||(11312734-11312837)
chr3 (94-198)||(51279230-51279333)
chr3 (95-143)||(28310541-28310589)
chr3 (98-198)||(30890489-30890588)
chr3 (96-196)||(38642632-38642731)
chr3 (220-261)||(10749713-10749754)
chr3 (220-261)||(30890233-30890274)
chr3 (209-261)||(35432464-35432516)
chr3 (95-142)||(30803990-30804037)
chr3 (95-142)||(33989157-33989204)
chr3 (96-163)||(55036793-55036859)
chr3 (96-142)||(21300327-21300373)
chr3 (80-198)||(30654469-30654586)
chr3 (140-198)||(35432632-35432690)
chr3 (98-156)||(40257005-40257062)
chr3 (94-127)||(49648-49681)
chr3 (220-261)||(1741413-1741454)
chr3 (220-261)||(10749344-10749385)
chr3 (220-261)||(10998190-10998231)
chr3 (221-258)||(30803875-30803912)
chr3 (97-198)||(33989301-33989401)
chr3 (220-261)||(53037053-53037094)
chr3 (95-163)||(24576414-24576481)
chr3 (98-142)||(33458060-33458104)
[»] chr5 (70 HSPs)
chr5 (94-261)||(33735532-33735698)
chr5 (95-261)||(7015728-7015893)
chr5 (94-261)||(32052443-32052609)
chr5 (94-261)||(22024089-22024255)
chr5 (87-261)||(21260857-21261030)
chr5 (140-261)||(27753698-27753819)
chr5 (93-261)||(37944992-37945159)
chr5 (95-261)||(16118170-16118335)
chr5 (96-261)||(25253087-25253251)
chr5 (96-261)||(25316877-25317041)
chr5 (98-261)||(22533609-22533771)
chr5 (93-261)||(34404482-34404649)
chr5 (98-261)||(6421841-6422003)
chr5 (93-231)||(14745446-14745583)
chr5 (93-198)||(7015506-7015610)
chr5 (96-261)||(18934714-18934878)
chr5 (121-261)||(41339573-41339711)
chr5 (98-261)||(8323059-8323221)
chr5 (150-261)||(18013666-18013777)
chr5 (91-198)||(33735309-33735415)
chr5 (96-198)||(27753480-27753580)
chr5 (93-198)||(25253368-25253472)
chr5 (93-198)||(25317159-25317263)
chr5 (90-198)||(6421617-6421724)
chr5 (93-198)||(32052222-32052326)
chr5 (95-142)||(7015702-7015749)
chr5 (95-198)||(12991070-12991172)
chr5 (95-198)||(13064691-13064793)
chr5 (94-196)||(22533389-22533490)
chr5 (98-198)||(18934996-18935094)
chr5 (106-198)||(14745595-14745686)
chr5 (106-198)||(18013894-18013984)
chr5 (97-157)||(21260995-21261054)
chr5 (94-142)||(31118954-31119002)
chr5 (95-163)||(34404607-34404675)
chr5 (94-198)||(37945276-37945378)
chr5 (95-198)||(8323338-8323440)
chr5 (195-250)||(12628314-12628369)
chr5 (210-261)||(12990902-12990953)
chr5 (96-163)||(12990912-12990978)
chr5 (210-261)||(13064523-13064574)
chr5 (96-163)||(13064533-13064599)
chr5 (95-142)||(16118144-16118191)
chr5 (96-163)||(37945118-37945184)
chr5 (97-143)||(8323199-8323245)
chr5 (98-163)||(16117964-16118028)
chr5 (97-142)||(41339549-41339594)
chr5 (95-163)||(22533583-22533650)
chr5 (95-163)||(25253210-25253277)
chr5 (92-143)||(147442-147493)
chr5 (95-142)||(22024063-22024110)
chr5 (95-142)||(27753672-27753719)
chr5 (96-163)||(33735507-33735573)
chr5 (219-261)||(147422-147464)
chr5 (220-261)||(12991105-12991146)
chr5 (220-261)||(16117987-16118028)
chr5 (220-261)||(21260891-21260932)
chr5 (220-261)||(25253112-25253153)
chr5 (220-261)||(25253403-25253444)
chr5 (220-261)||(25316902-25316943)
chr5 (95-163)||(25317000-25317068)
chr5 (220-261)||(25317194-25317235)
chr5 (220-261)||(32052250-32052291)
chr5 (220-261)||(32052541-32052582)
chr5 (220-261)||(33735630-33735671)
chr5 (220-261)||(34404510-34404551)
chr5 (220-261)||(37945020-37945061)
chr5 (93-198)||(41339352-41339456)
chr5 (99-163)||(6421819-6421882)
chr5 (97-198)||(20704995-20705096)
[»] scaffold0206 (2 HSPs)
scaffold0206 (94-261)||(10324-10490)
scaffold0206 (220-261)||(10351-10392)
[»] scaffold1493 (2 HSPs)
scaffold1493 (94-261)||(812-978)
scaffold1493 (97-163)||(788-853)
[»] scaffold0233 (2 HSPs)
scaffold0233 (97-252)||(8435-8589)
scaffold0233 (220-261)||(8459-8500)
[»] scaffold0202 (2 HSPs)
scaffold0202 (98-261)||(14238-14400)
scaffold0202 (93-196)||(14518-14620)
[»] scaffold0279 (3 HSPs)
scaffold0279 (98-261)||(11076-11238)
scaffold0279 (95-198)||(10853-10955)
scaffold0279 (95-163)||(11050-11117)
[»] scaffold0321 (3 HSPs)
scaffold0321 (94-261)||(10661-10827)
scaffold0321 (89-198)||(10944-11052)
scaffold0321 (99-163)||(10786-10849)
[»] scaffold0022 (1 HSPs)
scaffold0022 (98-250)||(120208-120353)
[»] scaffold0201 (2 HSPs)
scaffold0201 (150-261)||(14112-14223)
scaffold0201 (98-163)||(14089-14153)
[»] scaffold0009 (1 HSPs)
scaffold0009 (84-199)||(260990-261104)
[»] scaffold0251 (1 HSPs)
scaffold0251 (220-261)||(12045-12086)


Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 31689802 - 31690060
Alignment:
Q  1 aatataaaaggataaatgattttaaattattgactatatagtcaaaatacttcnnnnnnnggtcaagtagtcaaaatactttttattatatttaggctta 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  31689802 aatataaaaggataaatgattttaa-ttattgactatatagtcaaaatacttctttttttggtcaagtagtcaaaatactttttattatatttaggctta 31689900  T
Q  101 aataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31689901 aataggtcttttgtccctgcaaatatagaccatttgaatttt-cgtccatgaagttaccaatccttccaatatgccactgcaaatgttaatcatttgaaa 31689999  T
Q  201 aattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  31690000 aattgtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 31690060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 40422546 - 40422379
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||||||||||  |||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||| ||| ||||||||||||| ||||||    
T  40422546 taggcttaaataggtctttcatccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttcaaatctgccactgcaaatattaatc 40422448  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  40422447 atttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 40422379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 7778 - 7612
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||| |||||||||||| |||||||| |||||||    
T  7778 aggcttaaataggtctttcgtccctgcaaatataggccatttgaa-ttttcgtccatgaagttactaatccttccaatatgcccctgcaaatattaatca 7680  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | ||| |||||||||||||||||| ||||||| |||||||||| |||||| ||||||||    
T  7679 tttgacttttggtcataattacatctgattagtgacttcagggacgaaaattcaaatgacctatattt 7612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 29190540 - 29190378
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| |||||||||||||||||||||||||||||||   || ||||||||| |||| ||||||| |||| |||||||| |||||||||||    
T  29190540 ttaaataggtctttcgtccctgcaaatatagaccatttgaatttttatctc-tgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 29190442  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |    | ||||||||||||||||||||||||||| || |||||||||| |||||| ||||||||    
T  29190441 acttttagtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatattt 29190378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 95 - 261
Target Start/End: Original strand, 9632328 - 9632493
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||| ||| | ||||||||| |||| ||||| | || || ||||||| ||||||||    
T  9632328 ggcttaaataggtcttttgtccttgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccattttgtcattgcaaatattaatcat 9632426  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||  || ||||||||||||||||||||||||||| |||||||||| ||||| |||| ||||    
T  9632427 ttgaaaaaaggttctaattacatctgattagtaacttcagtgacgaaaattcaaatggtctagattt 9632493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 43866709 - 43866876
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| |||||||||||||||| ||||||||||||| ||| | |||| |||| |||  |||||||||||| |||||||| ||||||    
T  43866709 taggcttaaatatgtctttcgtccctgcaaatataggccatttgaatttt-cgtccctgaaattactaattcttccaatatgcccctgcaaatattaatc 43866807  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||    | |||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||    
T  43866808 atttgacttttggtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatattt 43866876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 25287791 - 25287957
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||| |||||| | ||||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| |||||||    
T  25287791 aggcttaaatatgtctttcgtccctgtaaatattggccatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 25287889  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  25287890 tttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 25287957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 36623738 - 36623572
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||| ||| | |||| |||| |||  |||||||||||| |||||||| |||||||    
T  36623738 aggcttaaatatgtctttcgtccctgcaaatataggccatttgaatttt-cgtccctgaaattactaattcttccaatatgcccctgcaaatattaatca 36623640  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | |||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||    
T  36623639 tttgacttttggtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatattt 36623572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 40525506 - 40525672
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| || ||||||||||||   |||||||||||| ||| | ||||||||| |||| ||||||| ||||||||||||| |||||||    
T  40525506 aggcttaaataagtctttcgttcctgcaaatatatgtcatttgaatttt-cgtccctgaagttactaatccttccaatctgccactgcaaatattaatca 40525604  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  40525605 tttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 40525672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 250
Target Start/End: Original strand, 22763596 - 22763749
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||||||||| ||| |||| |||||||||||  |||||||||||| ||| | ||||||||| |||||||| ||| | ||||| ||||| |||||||||    
T  22763596 gcttaaataggtatttcgtccttgcaaatataggtcatttgaatttt-cgtccctgaagttactaatctttctaatctaccactacaaatattaatcatt 22763694  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaat 250  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||| ||||    
T  22763695 tgaaaaatggtcctaattagatctgattagtaacttcagggacgaaaattcaaat 22763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 88 - 261
Target Start/End: Original strand, 20096013 - 20096185
Alignment:
Q  88 atatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgt 187  Q
    ||||| ||| |||||||||||||| |||||||||||||||   ||||||||||||| || | ||||||||| |||| ||||||| |||| |||||||| |    
T  20096013 atattaaggtttaaataggtctttcgtccctgcaaatatatgtcatttgaattttt-gtccctgaagttactaatccttccaatttgcctctgcaaatat 20096111  T
Q  188 taatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||    | |||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||    
T  20096112 taatcatttgacttttggtcctaattacatctgattagtaacttcagggaagaaaattcaaatgacctatattt 20096185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 97 - 261
Target Start/End: Complemental strand, 15716258 - 15716095
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    ||||||||||||||| |||| ||||||||||   ||||| |||||| ||| | ||||||||| |||| ||| | | ||||| | ||||| ||||||||||    
T  15716258 cttaaataggtctttcgtccatgcaaatatatgtcatttaaatttt-cgtccctgaagttactaatccttctattttgccattacaaatattaatcattt 15716160  T
Q  197 gaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  15716159 gaaaaatggtcataattacatctgattagtaacttcagagacgaaaattcaaatgacctatattt 15716095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 95 - 258
Target Start/End: Complemental strand, 547819 - 547657
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||| ||| | | ||||||| |||| ||||||| ||||||| ||||| ||||||||    
T  547819 ggcttaaatagatctttcgtccctgcaaatatagatcatttgaatttt-cgtccctaaagttactaatccttccaatctgccactacaaatattaatcat 547721  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctata 258  Q
    ||||    | |||||||||||||||||||||||||||||  |||||||||| |||||| |||||    
T  547720 ttgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctata 547657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 11478144 - 11478310
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||| ||| ||||||||||||||||  |||||||| ||||||| | ||||||||| |||| || |||| |||| |||||||| |||||||    
T  11478144 aggcttaaataggtttttcgtccctgcaaatataggtcatttgaa-ttttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatca 11478242  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | | |||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  11478243 tttgacttttggccctaattacatctgattagtaacttcagcgacgaaaattcaaatgacctatattt 11478310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 261
Target Start/End: Complemental strand, 37343176 - 37343001
Alignment:
Q  85 attatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaa 184  Q
    ||||| ||||| |||||||| |||||| | ||||||||||||||  |||||||||||| ||| | |||| |||| |||  |||||||||||| |||||||    
T  37343176 attatttttagacttaaatatgtctttcgcccctgcaaatataggtcatttgaatttt-cgtccctgaaattactaattcttccaatatgcccctgcaaa 37343078  T
Q  185 tgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    | ||||||||||||    | |||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||    
T  37343077 tattaatcatttgacttttggtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatattt 37343001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 37713699 - 37713861
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| ||||||  |||||||   |||||||||||| ||| ||||||||||  |||  || |||| | ||| ||||||| |||||||||||    
T  37713699 ttaaataggtctttcgtccctataaatataagtcatttgaatttt-cgtccatgaagttattaattctttcaatctaccattgcaaatattaatcatttg 37713797  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||| | |||| ||||||||    
T  37713798 aaaaatggtcctaattacatccgattagtaacttcagggacgaaaattcatatgacctatattt 37713861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 261
Target Start/End: Original strand, 23424512 - 23424677
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||||||||||  |||||| ||||||||  ||||||||||||| || | ||||||||| |||  |  |||| |||| |||||||| ||||||||    
T  23424512 ggcttaaataggtctttcatccctgtaaatataggtcatttgaattttt-gtccctgaagttactaattctaacaatctgcccctgcaaatattaatcat 23424610  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    |  ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  23424611 ttgacttttgatcctaattacatctgattagtaacttcagggacgaaaattcaaatgatctatattt 23424677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 261
Target Start/End: Original strand, 23514009 - 23514186
Alignment:
Q  83 ttattatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgca 182  Q
    |||||||  ||||||||||||| |||||| ||| ||||||||| ||  |||||||||||| ||  | | ||||||| |||| || || | ||||| ||||    
T  23514009 ttattattattaggcttaaataagtctttcgtctctgcaaataaagttcatttgaatttt-cgaccttaaagttactaatcctttcattttgccattgca 23514107  T
Q  183 aatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||| ||||||||||||||||| |||||||||||||| |||||||| |||||  |||||||||| ||||  |||||||||    
T  23514108 aatattaatcatttgaaaaatggtcctaattacatcagattagtagcttcatggacgaaaattcaaatagtctatattt 23514186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 13566413 - 13566575
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| ||||||||||||| ||  |||||||||||||   || ||||||||   ||| ||||| | ||||| ||||||| |||||||||||    
T  13566413 ttaaataggtctttcgtccctgcaaatacagtacatttgaatttttgtctc-tgaagttattgatccttccattttgccattgcaaatattaatcatttg 13566511  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| ||  |||||||||||||||||||| ||||  |||||||||| |||||| || |||||    
T  13566512 aaaaatggttataattacatctgattagtaaattcaaggacgaaaattcaaatgacctgtattt 13566575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 41251122 - 41251288
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| ||||||||||||||||  || ||||| |||||||   ||||||||| |||| |||||||||| | || ||||| |||||||    
T  41251122 aggcttaaataggtctttcgtccctgcaaatataggtcaattgaa-ttttcgtctctgaagttactaatccttccaatatgtccctacaaatattaatca 41251220  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | ||| |||||||| ||| ||||||||||||  |||||||||| |||||| ||||||||    
T  41251221 tttgacttttggtcataattacacctgtttagtaacttcatggacgaaaattcaaatgacctatattt 41251288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 43867095 - 43866993
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| || ||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||| || |||| |||| |||||||| ||||||||    
T  43867095 ggcttaaatatgtttttcgtccctgcaaatatagaccatttgaa-ttttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcat 43866997  T
Q  195 ttga 198  Q
    ||||    
T  43866996 ttga 43866993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 23424896 - 23424794
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| || ||||||||||||| ||||||||| ||||||| | ||||||||| |||| ||||||| |||| |||||||| ||||||||    
T  23424896 ggcttaaatatgtctttcgttcctgcaaatataggccatttgaa-ttttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatcat 23424798  T
Q  195 ttga 198  Q
    ||||    
T  23424797 ttga 23424794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 261
Target Start/End: Original strand, 26739714 - 26739881
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagacca-----tttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    ||||||||||||||| ||||||| ||||||||| ||     |||||||||| ||| | |||| |||| |||| || ||||||| | |||||||| |||||    
T  26739714 cttaaataggtctttcgtccctgtaaatatagatcagatcatttgaatttt-cgtccctgaaattactaatcctttcaatatgtccctgcaaatattaat 26739812  T
Q  192 catttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||    | ||||||||||||||||||||| |||||||| |||| ||||| |||||| ||||||||    
T  26739813 catttgacgtttggtcctaattacatctgattaggaacttcagggacg-aaattcaaatgacctatattt 26739881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 27857128 - 27857024
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||| ||||||| |||||| |||||||||||||||| ||||||||| ||||||| | ||||||||| |||| ||||||| ||||  ||||||| ||||||    
T  27857128 taggtttaaatatgtctttcgtccctgcaaatataggccatttgaa-ttttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatc 27857030  T
Q  193 atttga 198  Q
    ||||||    
T  27857029 atttga 27857024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 40422154 - 40422262
Alignment:
Q  89 tatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgtt 188  Q
    |||| |||||||||||||||||| ||||||||||||||||  ||| |||| |||||||   |||||| || |||| ||||||| ||||||||||||| ||    
T  40422154 tattcaggcttaaataggtctttcgtccctgcaaatataggtcatatgaa-ttttcgtctctgaagtaactaatccttccaatctgccactgcaaatatt 40422252  T
Q  189 aatcatttga 198  Q
    ||||||||||    
T  40422253 aatcatttga 40422262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 41801818 - 41801918
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    |||||||| || ||| ||||||||||||||||  |||||||||||| ||||| ||||||||| |||| ||||||| |||| |||||||| ||||||||||    
T  41801818 cttaaatatgtttttcgtccctgcaaatataggtcatttgaatttt-cgttcctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 41801916  T
Q  197 ga 198  Q
    ||    
T  41801917 ga 41801918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 38619805 - 38619900
Alignment:
Q  102 ataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    |||||||||| || |||||||||||||| |||||||||||| ||| | ||||||||| |||| ||||||| ||||||||||||  ||||||||||||    
T  38619805 ataggtctttcgttcctgcaaatatagatcatttgaatttt-cgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttga 38619900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 9632688 - 9632603
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactg 180  Q
    |||||||||||||||||||||||||||||||||||  |||||||| ||||||| | ||||||||| |||| ||||||| || |||||    
T  9632688 aggcttaaataggtcttttgtccctgcaaatataggtcatttgaa-ttttcgtccttgaagttactaatccttccaatgtgtcactg 9632603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 261
Target Start/End: Complemental strand, 41802194 - 41802035
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||||||||||||| || |||||||||||| |     |||||||| | | | ||||||||| |||| ||||||| |||| |||||||| || ||||||    
T  41802194 gcttaaataggtctttcgttcctgcaaatataaa-----tgaatttt-catccttgaagttactaatcattccaatttgcccctgcaaatatttatcatt 41802101  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||| |  |  ||||||||||||||||||| || |||||| |||||||||| |||||  ||||||||    
T  41802100 tgacatttgatcctaattacatctgattattagcttcagggacgaaaattcaaatggcctatattt 41802035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 36623351 - 36623454
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| || ||| |||||||||||||||| ||||||||| ||||||| | ||||||||| |||| || |||| |||  |||||||| |||||||    
T  36623351 aggcttaaatatgtttttcgtccctgcaaatataggccatttgaa-ttttcgtccctgaagttactaatcctttcaatctgctcctgcaaatattaatca 36623449  T
Q  194 tttga 198  Q
    |||||    
T  36623450 tttga 36623454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 37342781 - 37342884
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||  | ||| ||||||||||||| |||||||||||| ||||||||| ||||||||| |||| || ||||  ||| |||||||| |||||||    
T  37342781 aggcttaaatatctttttcgtccctgcaaatacagaccatttgaa-ttttcgttcctgaagttactaatcctttcaatccgcccctgcaaatattaatca 37342879  T
Q  194 tttga 198  Q
    |||||    
T  37342880 tttga 37342884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 41182281 - 41182178
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| |||||||||||||||   |||||||| ||||||| | ||||||||| |||| || |||| |||| |||||||| |||||||    
T  41182281 aggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaa-ttttcgtccctgaagttactaatcatttcaatctgcccctgcaaatattaatca 41182183  T
Q  194 tttga 198  Q
    |||||    
T  41182182 tttga 41182178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 24530040 - 24529946
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    ||||||||||||||||| || |||||||||||||  |||||||| ||||||||  ||||||||| |||| |||| || ||||||||||||| ||||    
T  24530040 ggcttaaataggtctttcgttcctgcaaatataggtcatttgaa-ttttcgttactgaagttactaatccttcctatctgccactgcaaatattaa 24529946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 547431 - 547530
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| | |||| |||||||||||||||| |||||| ||||||| || | ||||||||| |||| ||||||| |||| |||||||| ||||||||    
T  547431 ggcttaaatatg-ctttcgtccctgcaaatataggccatttaaattttt-gtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 547528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 261
Target Start/End: Original strand, 40933267 - 40933340
Alignment:
Q  188 taatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||||  |||||||||||| |||||||||| |||||| || |||||| |||||| ||||||||    
T  40933267 taatcatttgaaaaatgatcctaattacatttgattagtaatttcagaaacaaaaattcaaatgacctatattt 40933340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 35163500 - 35163599
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||||||||||  ||||||||||||||  ||||||||| ||||||| | |||||||||  ||| || |||| ||||||||||||  |||||||||||    
T  35163500 ttaaataggtctttcatccctgcaaatataagccatttgaa-ttttcgtccttgaagttactgatcctttcaatctgccactgcaaaatttaatcatttg 35163598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 41251507 - 41251408
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||  ||||| ||||||||||||||| |||||||||| ||| ||| ||||||||||| |||| || |||| | || |||||||| |||||||||||    
T  41251507 ttaaatatatctttcgtccctgcaaatataaaccatttgaa-tttccgtccatgaagttactaatcatttcaatctacccctgcaaatattaatcatttg 41251409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 24529732 - 24529841
Alignment:
Q  150 tgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaa 249  Q
    ||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||||| || ||  |||  |||||||||||||||| | |||||||||| |||    
T  24529732 tgaagttactaatccttccaatgtgccagtgcaaatattaatcatttgaaaaatggt-ctggttatgtctgattagtaacttctg-gacgaaaattcaaa 24529829  T
Q  250 tgatctatattt 261  Q
    |||  |||||||    
T  24529830 tgacttatattt 24529841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 26740101 - 26739999
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatg-ccactgcaaatgttaatcat 194  Q
    ||||||||| |||||| ||||||||||||||||  |||||||| ||||||| ||||||||||| |||| || |||| || || || ||||| ||||||||    
T  26740101 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccatgaagttactaatccttgcaatctgccccctacaaatattaatcat 26740003  T
Q  195 ttga 198  Q
    ||||    
T  26740002 ttga 26739999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 11478508 - 11478427
Alignment:
Q  116 cctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    |||| |||||||||||||||||| ||| ||| | ||||||||| |||| ||||||| |||| |||||||| ||||||||||||    
T  11478508 cctgtaaatatagaccatttgaacttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 11478427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 35163773 - 35163721
Alignment:
Q  209 taattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||||||||||||||  ||||||||| |||||| ||||||||    
T  35163773 taattacatctgattagtaacttcagttacgaaaattcaaatgacctatattt 35163721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 9632519 - 9632472
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||| |||||||| |||||||||||| |||||||||||||||||    
T  9632519 ggcttaaacaggtctttcgtccctgcaaatctagaccatttgaatttt 9632472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 20096397 - 20096319
Alignment:
Q  106 gtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaat 185  Q
    |||||| |||||||||||||||| ||||||||| ||||||| | ||||||||| |||| ||||||| ||||  |||||||    
T  20096397 gtctttcgtccctgcaaatataggccatttgaa-ttttcgtccctgaagttactaatccttccaatctgcccatgcaaat 20096319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 23424702 - 23424636
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||| |||||||| ||||||| | ||||||||| ||||    
T  23424702 gcttaaataggtctttcatccctgcaaatatagatcatttgaa-ttttcgtccctgaagttactaatc 23424636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 31690277 - 31690180
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    |||||||| || ||| ||||||| ||||||||  |||| ||||||| ||| | ||||||||| |||| ||||||| ||||||||||||| ||||||||||    
T  31690277 cttaaatatgtatttcgtccctgtaaatataggtcatt-gaatttt-cgtccctgaagttactaatcattccaatctgccactgcaaatattaatcattt 31690180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 27437600 - 27437515
Alignment:
Q  114 tccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaa 200  Q
    ||||||||||||||| || |||||||||| ||| | ||||||||| ||||||| || | ||||||||||| |  |||||||||||||    
T  27437600 tccctgcaaatataggccgtttgaatttt-cgtccctgaagttactaatcttttcattttgccactgcaattactaatcatttgaaa 27437515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 41182086 - 41182040
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||    
T  41182086 gcttaaataggtctttcgtccctgcaaatataggtcatttgaatttt 41182040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 41251313 - 41251252
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttac 158  Q
    ||||||||||||||||  |||||||||||||||  |||||||| ||||||| |||||||||||    
T  41251313 gcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccatgaagttac 41251252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 7391 - 7495
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||| ||||||| |||||| ||||||||||||||||  |||||||| ||||| | | ||||||||| |||  |||||| ||| | || ||||| ||||||    
T  7391 taggattaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttcttccctgaagttactaattcttccaacatgtccctacaaatattaatc 7489  T
Q  193 atttga 198  Q
    ||||||    
T  7490 atttga 7495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 23514212 - 23514144
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatct 164  Q
    ||||||||||| ||||| ||||||| |||||||||| ||||||| ||||||| ||||||| ||| |||||    
T  23514212 ggcttaaatagttctttcgtccctgtaaatatagactatttgaa-ttttcgtccatgaagctactaatct 23514144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 29190158 - 29190262
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||  |||||  ||||||||||||||| |||| |||| |||||||   ||||||||| |||| ||||||| |  | |||||||| ||||||    
T  29190158 taggcttaaatatatctttcctccctgcaaatataggccatctgaa-ttttcgtctctgaagttactaatccttccaatctatccctgcaaatattaatc 29190256  T
Q  193 atttga 198  Q
    ||||||    
T  29190257 atttga 29190262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 38619865 - 38619824
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  38619865 gattagtaacttcagggacgaaaattcaaatgatctatattt 38619824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 40525893 - 40525789
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||  ||||  ||||||| ||||||||   ||||||||||| ||| | |||| |||| |||| ||||||| |||| |||||||| ||||||    
T  40525893 taggcttaaatatatcttccgtccctgtaaatataggttatttgaatttt-cgtccctgaaattactaatcattccaatctgcccctgcaaatattaatc 40525795  T
Q  193 atttga 198  Q
    ||||||    
T  40525794 atttga 40525789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 41802011 - 41802056
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||    
T  41802011 cttaaataggtctttcatccctgcaaatataggccatttgaatttt 41802056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 15716072 - 15716116
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||    
T  15716072 ttaaataggtcttttatccctgcaaatataggtcatttgaatttt 15716116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 22763977 - 22763878
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||| ||||| |||||||||  |||| |||||||||| |||||||   ||||||||| |||| ||||||| || || || |||| |||||||||||    
T  22763977 ttaaatagatctttcgtccctgcagctataaaccatttgaa-ttttcgtctctgaagttactaatccttccaatctgtcattgtaaatattaatcatttg 22763879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 27436582 - 27436681
Alignment:
Q  114 tccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaatt 213  Q
    |||||||||||||||  | |||||||||| ||| | ||||||||| ||||||| || | ||||||||||| |  |||||||||||||  | |||||||||    
T  27436582 tccctgcaaatataggtcgtttgaatttt-cgtccctgaagttactaatcttttcattttgccactgcaattactaatcatttgaaatttagtcctaatt 27436680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 27856787 - 27856907
Alignment:
Q  141 tttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacga 240  Q
    |||||| | ||||||||| |||| |||||||  ||| |||||||| ||||||||||||    | ||| ||||||||| |||||| |||||| |  |||||    
T  27856787 tttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttgacttttggtcttaattacatttgattactaactttatggacga 27856886  T
Q  241 aaatttaaatgatctatattt 261  Q
     |||| ||||||| |||||||    
T  27856887 taattcaaatgatttatattt 27856907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 40422354 - 40422420
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  40422354 ggcttaaataggtcttt-gtccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 40422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 38600334 - 38600232
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||  ||| ||||||||||||||||  ||||||||  |||||| | ||||||||| |||| || |||   |||||||||||  ||||||||    
T  38600334 ggcttaaataggcatttcgtccctgcaaatataggtcatttgaa-atttcgtccctgaagttactaatcctttcaaacagccactgcaaaatttaatcat 38600236  T
Q  195 ttga 198  Q
    ||||    
T  38600235 ttga 38600232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 11478335 - 11478289
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||    
T  11478335 gcttaaataggtctttcatccctgcaaatataggtcatttgaatttt 11478289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 25287981 - 25287916
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  25287981 cttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 25287916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 29190353 - 29190399
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||    
T  29190353 gcttaaataggtctttcatccctgcaaatataggtcatttgaatttt 29190399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 37342976 - 37343022
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||    
T  37342976 gcttaaataggtctttcatccctgcaaatataggtcatttgaatttt 37343022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 547752 - 547793
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||| || |||||||||| |||||||||||||||    
T  547752 gattagtaactttagggacgaaaattcaaatgatctatattt 547793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 9632395 - 9632354
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  9632395 gattagtaacttcagggacgaaaattcaaatgacctatattt 9632354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 15716193 - 15716234
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||||||||||  |||||||    
T  15716193 gattagtaacttcagggacgaaaatttaaatgacatatattt 15716234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 22763662 - 22763621
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  22763662 gattagtaacttcagggacgaaaattcaaatgacctatattt 22763621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 40422477 - 40422518
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  40422477 gattagtaacttcagggacgaaaattcaaatgacctatattt 40422518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 41251190 - 41251149
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| || ||| ||||||||    
T  41251190 gattagtaacttcagagacgaaaattcaattgacctatattt 41251149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 22763786 - 22763719
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| ||||||||||||||   | ||||||| ||||||| | ||||||||| ||||    
T  22763786 ggcttaaataggtctttcgtccctgcaaatatctgctatttgaa-ttttcgtccctgaagttactaatc 22763719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 27856932 - 27856888
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatt 140  Q
    ||||||||||||||||  |||||||||||||| | ||||||||||    
T  27856932 gcttaaataggtctttcatccctgcaaatataaatcatttgaatt 27856888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 38598983 - 38599082
Alignment:
Q  114 tccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaatt 213  Q
    ||||||||| ||||| |||||||| |||||| | | |||| |||| |||| |  || | |||| |||||||| ||||||||||||||| | |||||||||    
T  38598983 tccctgcaattataggccatttga-tttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttgaaaattcgtcctaatt 38599081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 33030332 - 33030499
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| ||| | ||||||||| |||  ||||||| ||||||||||||| | ||||    
T  33030332 taggcttaaataggtcttttgtccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaattcttccaatctgccactgcaaatatgaatc 33030430  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||  |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  33030431 atttgaaaaatgatcctaattacatctgattagtaacttcagaaacgaaaattcaaatgatctatattt 33030499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 84 - 261
Target Start/End: Complemental strand, 49003270 - 49003094
Alignment:
Q  84 tattatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaa 183  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||  |||||||| ||||||| ||||||||||| |||| ||||||| |||| ||||||    
T  49003270 tattatattaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccatgaagttactaatccttccaatctgcctctgcaa 49003172  T
Q  184 atgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    || ||||||||||||    | |||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||    
T  49003171 atattaatcatttgatttttggtcctaattacatctgattagtaacttcagggacggaaattcaaatgacctatattt 49003094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 94 - 260
Target Start/End: Original strand, 739218 - 739383
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| ||||||| | ||||||||| |||| |||||||||||| |||||||| |||||||    
T  739218 aggcttaaataggtttttcgtccctgcaaatatagaccatttgaa-ttttcgtccttgaagttactaatccttccaatatgcccctgcaaatattaatca 739316  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatatt 260  Q
    |||||    | ||||||||||||||||||||||||||||||  ||||||||| |||||| |||||||    
T  739317 tttgacttttggtcctaattacatctgattagtaacttcaggaacgaaaattcaaatgacctatatt 739383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 8890594 - 8890428
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||| || ||| |||||||| || |||| |||||||||| |||||||||| |||||||    
T  8890594 aggcttaaataggtctttcgtccctgcaaatataggtcatttgaatatt-cgtccatgaagtgactaatcattccaatatgtcactgcaaatattaatca 8890496  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||  |  ||||||||||| |||||||||||||  |||||||||| |||||| ||||||||    
T  8890495 tttgaaaaatgattttaattacatctcattagtaacttcatggacgaaaattcaaatgacctatattt 8890428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 5183890 - 5183725
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||||||| | ||||||||| |||| ||||||| |||| |||||||| ||||||||    
T  5183890 ggcttaaatacgtcttttgtccctgcaaatataggccatttgaa-ttttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaatcat 5183792  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    | ||||||||||||| |||||||||||||||  |||||||||| |||||| ||||||||    
T  5183791 ttgacttttggtcctaattacatatgattagtaacttcatggacgaaaattcaaatgacctatattt 5183725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 19755791 - 19755624
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||||||  | | ||||||||| |||| ||||||| |||| |||||||| ||||||    
T  19755791 taggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttta-tccctgaagttactaatccttccaatctgcccctgcaaatattaatc 19755693  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||    | |||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||    
T  19755692 atttgacttttggtcctaattatatctgattagtaacttcagggacgaaaattcaaatgacctatattt 19755624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 261
Target Start/End: Complemental strand, 12577405 - 12577231
Alignment:
Q  86 ttatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaat 185  Q
    |||| ||||||||||||||||||||| |||||||||||||||   ||||| |||||| ||| | ||||||||| |||| || |||| |||| ||||||||    
T  12577405 ttatttttaggcttaaataggtctttcgtccctgcaaatataagtcatttaaatttt-cgtccttgaagttactaatcctttcaatctgcccctgcaaat 12577307  T
Q  186 gttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
     ||||||||||||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  12577306 attaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 12577231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 46850042 - 46849877
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||| ||| | |||||||||  ||| ||||||| |||| |||||||| ||||||||    
T  46850042 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaatttt-cgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcat 46849944  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    | |||||||||||||||||||||||||||||| |||||||||| ||||||  |||||||    
T  46849943 ttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacatatattt 46849877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 261
Target Start/End: Complemental strand, 33347803 - 33347635
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    ||||||||| |||||||||| ||||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| ||||  ||||||| |||||    
T  33347803 ttaggcttatataggtctttcgtccctgcaaatataggtcatttgaatttt-cgtccttgaagttactaatccttccaatctgcccttgcaaatattaat 33347705  T
Q  192 catttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||    | ||||||||||||||||| |||||||||||| |||||||||| |||||| ||||||||    
T  33347704 catttgacttttggtcctaattacatctgactagtaacttcagggacgaaaattcaaatgacctatattt 33347635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 1040296 - 1040463
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| |||| ||||||||||  |||||||||||||| || | ||||||||| |||| ||||||| |||| |||||||| ||||||    
T  1040296 taggcttaaatatgtctttcgtccttgcaaatataagccatttgaattttt-gtccctgaagttactaatccttccaatctgcccctgcaaatattaatc 1040394  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||    | ||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  1040395 atttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatattt 1040463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 1047202 - 1047369
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| |||| ||||||||||  |||||||||||||| || | ||||||||| |||| ||||||| |||| |||||||| ||||||    
T  1047202 taggcttaaatatgtctttcgtccttgcaaatataagccatttgaattttt-gtccctgaagttactaatccttccaatctgcccctgcaaatattaatc 1047300  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||    | ||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  1047301 atttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatattt 1047369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 24701654 - 24701489
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||||||||||  ||||||||||||||  ||||||||||||| ||| | ||||||||| |||| ||||| | ||||| | ||||| |||| ||    
T  24701654 aggcttaaataggtctttcatccctgcaaatataagccatttgaatttt-cgtccctgaagttactaatccttccattttgccattacaaatattaacca 24701556  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||| ||||||||||||| |||||| ||||||||| |||||||||| |||||| ||||||||    
T  24701555 tttgaaaaatggtcctaattacat-tgattaataacttcagggacgaaaattcaaatgacctatattt 24701489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 48380680 - 48380846
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| |||| || ||||||||  |||||||||||| |||   ||||||||| |||| ||||||| ||||| ||||||  |||||||    
T  48380680 aggcttaaataggtctttcgtccttgtaaatataggtcatttgaatttt-cgtcgctgaagttactaatccttccaatctgccagtgcaaaaattaatca 48380778  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||| ||||||||||||||||||||||||||||   ||||||| || ||||||| |||||||    
T  48380779 tttgaaaaatggtcctaattacatctgattagtaacttcgtggacgaaatttcaaatgatatatattt 48380846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 96 - 261
Target Start/End: Complemental strand, 37152921 - 37152757
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||| |||   ||||||||| |||| ||||||| |||| |||||||| |||||||||    
T  37152921 gcttaaatatgtctttcgtccctgcaaatatagtccatttgaatttt-cgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 37152823  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||    | |||||||||||||||||||||||||||||  |||||||||| ||||||  |||||||    
T  37152822 tgacttttagtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacttatattt 37152757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 6056375 - 6056541
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||||||||||||  |||||||||||| ||| | | || ||||  ||| |||||||||| | |||||||| |||||||    
T  6056375 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaatttt-cgtccctaaaattactgatccttccaatatgtccctgcaaatattaatca 6056473  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  6056474 tttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 6056541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 2953848 - 2953683
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| ||||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| ||||||||    
T  2953848 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 2953750  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    | ||||||||||||| |||||||||||||||  |||||||||| ||||||  |||||||    
T  2953749 ttgatttttggtcctaattacatatgattagtaacttcaaggacgaaaattcaaatgacttatattt 2953683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 261
Target Start/End: Complemental strand, 25415232 - 25415063
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||| |||||||||  | ||| |||||||||||||||   |||||||||||| ||||| ||||||||| |||| ||||||||||   |||||||| ||||    
T  25415232 tttatgcttaaatatatttttcgtccctgcaaatataagtcatttgaatttt-cgttcctgaagttactaatccttccaatatgttcctgcaaatattaa 25415134  T
Q  191 tcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
     |||||||    | ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  25415133 ccatttgacttttggtcctaattacatctgattagtaacttcagagacgaaaattcaaatgacctatattt 25415063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 96 - 261
Target Start/End: Complemental strand, 26953484 - 26953320
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||||||  | ||| ||||||||||||||| |||||||||||||| | ||| ||||||||| |||  ||||||| |||   ||||||| |||||||||    
T  26953484 gcttaaatatatatttcgtccctgcaaatataaaccatttgaatttt-cattcctgaagttactaattcttccaatctgctcttgcaaatattaatcatt 26953386  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||    | ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  26953385 tgacttttggtcctaattacatctgattagtaacttcagagacgaaaattcaaatgacctatattt 26953320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 30830514 - 30830350
Alignment:
Q  94 aggcttaaataggtctttt-gtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| |||| ||||||||||   |||||||||||| ||| ||   |||||| |||| ||||| | ||||| ||||||| ||||||    
T  30830514 aggcttaaataggtctttttgtccttgcaaatataagtcatttgaatttt-cgtcca---agttactaatcattccattttgccattgcaaatattaatc 30830419  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||| || ||||||||||||||||||||||||||| || |||||||||| ||||||  |||||||    
T  30830418 atttgaaatatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacttatattt 30830350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 261
Target Start/End: Complemental strand, 29981021 - 29980857
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||||||||||||| |||  |||||||||||  |||||||||||| ||| |  |||||||| |||| ||||||| |||| |||||||| |||||||||    
T  29981021 gcttaaataggtctttcgtctttgcaaatataggtcatttgaatttt-cgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcatt 29980923  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||    | ||||||||||||||| ||||||||||| || |||||||||| |||||| ||||||||    
T  29980922 tgatttttggtcctaattacatcttattagtaactttagggacgaaaattcaaatgacctatattt 29980857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 245
Target Start/End: Complemental strand, 5926905 - 5926756
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| | | ||||||||| ||||  |||||| |||| ||||||||  |||||||    
T  5926905 ggcttaaataggtctttcgtccctgcaaatatagaccatttgaa-ttttcatccctgaagttactaatccgtccaatctgcctctgcaaatagtaatcat 5926807  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatt 245  Q
    ||||    | ||||||||||||| | ||||||||||||||  |||||||||    
T  5926806 ttgacttttggtcctaattacatttaattagtaacttcaggaacgaaaatt 5926756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 250
Target Start/End: Complemental strand, 46545096 - 46544961
Alignment:
Q  114 tccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaatt 213  Q
    |||||| ||||||||  |||||||| ||| ||| | ||||||||| |||| ||||| | ||||||||||||| ||||||||||||||||| |||||||||    
T  46545096 tccctgtaaatataggtcatttgaagttt-cgtccctgaagttactaatccttccattttgccactgcaaatattaatcatttgaaaaatagtcctaatt 46544998  T
Q  214 acatctgattagtaacttcagagacgaaaatttaaat 250  Q
     ||||||||||||||||| |  |||||||||| ||||    
T  46544997 gcatctgattagtaactttatggacgaaaattcaaat 46544961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 261
Target Start/End: Complemental strand, 46364951 - 46364794
Alignment:
Q  103 taggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaa 202  Q
    ||||||||| | |||||||||||||    ||||||||||| ||| | |||| |||| |||| || ||||||||| |||||||| ||||||||||||        
T  46364951 taggtctttcgcccctgcaaatataagttatttgaatttt-cgtccttgaaattactaatcctttcaatatgcccctgcaaatattaatcatttgacttt 46364853  T
Q  203 ttgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |  ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  46364852 tgatcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 46364794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 52455095 - 52454978
Alignment:
Q  140 ttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacg 239  Q
    ||||||| ||| ||||||  |||| ||||||| ||||||||||| | ||||||||||||||||| ||| ||||||||||||||||||||||| || || |    
T  52455095 ttttcgtccataaagttattaatccttccaatctgccactgcaactattaatcatttgaaaaatggtcataattacatctgattagtaactttagggatg 52454996  T
Q  240 aaaatttaaatgatctat 257  Q
    |||||| |||||| ||||    
T  52454995 aaaattcaaatgacctat 52454978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 10019703 - 10019592
Alignment:
Q  150 tgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaa 249  Q
    ||||||||| |||| ||||| | ||||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||| |||||||| |||||||||| |||    
T  10019703 tgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatggtcataattacatttgattagcaacttcagggacgaaaattcaaa 10019604  T
Q  250 tgatctatattt 261  Q
    |||  |||||||    
T  10019603 tgacttatattt 10019592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 35312361 - 35312195
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| || |||| |||||||    ||||||||||| ||| | || |||||| |||| ||||| | || || ||||||| |||||||    
T  35312361 aggcttaaataagtctttcgttcctgtaaatatatcttatttgaatttt-cgtccttggagttactaatccttccattttgtcattgcaaatattaatca 35312263  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||| ||| ||||||||| |||||||||||||||  ||| |||||| ||||| |||||||||    
T  35312262 tttgaaaaatggtcttaattacatttgattagtaacttcatcgacaaaaattcaaatggtctatattt 35312195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 6334653 - 6334757
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||  | ||||||| |||| |||| || ||||||||||||| |||||    
T  6334653 ttaggcttaaataagtctttcatccctgcaaatatagaccatttgaa-ttttcgttgttaaagttactaatccttccgatctgccactgcaaatattaat 6334751  T
Q  192 catttg 197  Q
    ||||||    
T  6334752 catttg 6334757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 49002879 - 49002978
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||| |||||| ||||||||||||||||  |||||||||||| ||| ||||||||||| |||| ||||||| |||| |||||||| |||||||||||    
T  49002879 ttaaatatgtctttcgtccctgcaaatataggtcatttgaatttt-cgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 49002977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 6334902 - 6334981
Alignment:
Q  178 ctgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctat 257  Q
    |||||||| ||||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  6334902 ctgcaaatattaatcatttgaaaagtggtcataattacatctgattagtaacttcaaagacgaaaattcaaatgacctat 6334981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 8890210 - 8890313
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||| ||| ||||||||||||||||  ||||||||| ||  || | ||||||||| |||||||||||| ||||||| ||||| ||||||    
T  8890210 taggcttaaataggtatttcgtccctgcaaatataggtcatttgaatatt--gtccctgaagttactaatctttccaatctgccactccaaatattaatc 8890307  T
Q  193 atttga 198  Q
    ||||||    
T  8890308 atttga 8890313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 26953098 - 26953203
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    ||||||||||||| |||||| |||| ||||||||||||| ||||||| ||||||| | ||||||||| |||| || |||| |||| |||||||| |||||    
T  26953098 ttaggcttaaatatgtctttcgtccttgcaaatatagactatttgaa-ttttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaat 26953196  T
Q  192 catttga 198  Q
    |||||||    
T  26953197 catttga 26953203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 12577009 - 12577112
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||| |||||||| ||||||||| |||||||  |||||||||| |||| || |||| |||| |||||||| |||||||    
T  12577009 aggcttaaatatgtctttcgtccctgtaaatataggccatttgaa-ttttcgtctatgaagttactaatcatttcaatctgcccctgcaaatattaatca 12577107  T
Q  194 tttga 198  Q
    |||||    
T  12577108 tttga 12577112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 29043152 - 29043037
Alignment:
Q  82 tttattatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgc 181  Q
    |||||| ||| | |||||||||| |||||| ||| |||||||||||| ||||||||| ||||||| | ||||||||| |||| || |||| |||| ||||    
T  29043152 tttattttatcttggcttaaatatgtctttcgtctctgcaaatataggccatttgaa-ttttcgtccctgaagttactaatcctttcaatctgcccctgc 29043054  T
Q  182 aaatgttaatcatttga 198  Q
    |||| ||||||||||||    
T  29043053 aaatattaatcatttga 29043037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 33030719 - 33030617
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||| ||||| || |||||||||||||| |||||||||||| ||| |||||| |||| |||| || |||| ||||||||||||| |||||||    
T  33030719 aggcttaaatag-tctttcgttcctgcaaatatagatcatttgaatttt-cgtccatgaaattactaatcctttcaatctgccactgcaaatattaatca 33030622  T
Q  194 tttga 198  Q
    |||||    
T  33030621 tttga 33030617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 29042759 - 29042920
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||| |||||| ||||| | |||||||| |||||||| ||||||||    |||||||  |||| ||||||| || | |||||||| |||||||||||    
T  29042759 ttaaatatgtctttcgtccc-gtaaatataggccatttga-tttttcgtcgcggaagttattaatccttccaatctgtccctgcaaatattaatcatttg 29042856  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |    | ||| |||||||||||||||||||||||||| || ||||||| |||||| ||||||||    
T  29042857 atttttggtcataattacatctgattagtaacttcagggatgaaaattcaaatgacctatattt 29042920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 198
Target Start/End: Original strand, 5926524 - 5926621
Alignment:
Q  100 aaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    ||||| |||||| ||||||||||||||||  |||||||||||| ||| | ||||||||| |||| |||||||||||| |||||||  ||||||||||||    
T  5926524 aaatatgtctttcgtccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcatttga 5926621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 24701269 - 24701370
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||| ||||||||||||  |||||||| ||||||| | ||||||||| |||| ||||||| ||||||||||||  |||||||    
T  24701269 aggcttaaataagtctttcgtctctgcaaatatagctcatttgaa-ttttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatca 24701367  T
Q  194 ttt 196  Q
    |||    
T  24701368 ttt 24701370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 25414841 - 25414946
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    ||||||||||||| |||||| |||||| ||||||||| |||||||||||||    || ||||||||| |||| ||||||| |||| |||||||| |||||    
T  25414841 ttaggcttaaatatgtctttcgtccctacaaatataggccatttgaattttcttctc-tgaagttactaatccttccaatctgcccctgcaaatattaat 25414939  T
Q  192 catttga 198  Q
    |||||||    
T  25414940 catttga 25414946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 49989821 - 49989933
Alignment:
Q  121 aaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctg 220  Q
    |||||| |||||||| |||||||||||| ||||||||  |||| || |||| |||| |||||||| ||||||||||||    | ||||||||||||||||    
T  49989821 aaatatggaccattt-aatttttcgttcttgaagttattaatcctttcaatctgcctctgcaaatattaatcatttgacttttggtcctaattacatctg 49989919  T
Q  221 attagtaacttcag 234  Q
    |||| |||||||||    
T  49989920 attaataacttcag 49989933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 29980642 - 29980741
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||| |||||| |||| || ||||||||  |||||||||||| ||  ||||||||||| |||||||||||| |||| |||||||| |||||||||||    
T  29980642 ttaaatatgtctttcgtccttgtaaatataggtcatttgaatttt-cgcccatgaagttactaatctttccaatctgcccctgcaaatattaatcatttg 29980740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 5183507 - 5183608
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| |||||| || |||| ||||||||  |||||||||||| ||| ||| ||||||| |||| ||||||| |||| |||||||| |||||||||    
T  5183507 gcttaaatatgtctttcgttcctgaaaatataggtcatttgaatttt-cgtccataaagttactaatccttccaatctgcccctgcaaatattaatcatt 5183605  T
Q  196 tga 198  Q
    |||    
T  5183606 tga 5183608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 51934095 - 51933993
Alignment:
Q  160 aatctttccaatatgccactgcaaa-tgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctata 258  Q
    |||| ||||||  |||||||||||| | ||||||||||||||||| |||||||||||||||||| ||||  ||||  |||||||||| ||||||  ||||    
T  51934095 aatccttccaagctgccactgcaaaatattaatcatttgaaaaatggtcctaattacatctgatcagtagtttcaaggacgaaaattcaaatgacatata 51933996  T
Q  259 ttt 261  Q
    |||    
T  51933995 ttt 51933993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 35312172 - 35312217
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaattttt 143  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  35312172 ttaaataggtctttcgtccctgcaaatatagaccatttgaattttt 35312217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 46364572 - 46364676
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| ||||||| | || || | || ||||| ||||||    
T  46364572 taggcttaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatcttttccatctgtccctacaaatattaatc 46364670  T
Q  193 atttga 198  Q
    ||||||    
T  46364671 atttga 46364676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 1047589 - 1047486
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| ||||||  |||||| ||||||||  |||||||||||| |||   ||||||||| |||| ||||||| |||| |||||||| |||||||    
T  1047589 aggcttaaatatgtctttcatccctgtaaatataggtcatttgaatttt-cgtctctgaagttactaatccttccaatctgcccctgcaaatattaatca 1047491  T
Q  194 tttga 198  Q
    |||||    
T  1047490 tttga 1047486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 2953464 - 2953566
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| ||||||| ||||||||  |||||||| ||||||| | | ||||||| |||| || |||| |||| |||||||| ||||||||    
T  2953464 ggcttaaatatgtctttcgtccctgtaaatataggtcatttgaa-ttttcgtccctaaagttactaatcctttcaatctgcccctgcaaatattaatcat 2953562  T
Q  195 ttga 198  Q
    ||||    
T  2953563 ttga 2953566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 52454757 - 52454851
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    ||||||||| |||||| | || |||||||||||  ||||||| |||| ||| |||||||||| ||||| ||||||| ||||||||||||| |||||    
T  52454757 gcttaaataagtctttcgcccatgcaaatataggtcatttgactttt-cgtccatgaagttatcaatcattccaatctgccactgcaaatattaat 52454851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 37152544 - 37152640
Alignment:
Q  101 aataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    |||| |||||| |||||| |||||||||  |||||||||||| ||| ||||||||||| |||| ||||||| ||||  |||||||  |||||||||||    
T  37152544 aatatgtctttcgtccctacaaatataggtcatttgaatttt-cgtccatgaagttactaatccttccaatctgcccgtgcaaatactaatcatttga 37152640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 6056763 - 6056660
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatg-aagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||| |||||| |||||||||||||||  ||||||||||||| | | | || ||||||| |||| || |||| |||| |||||||| |||||||    
T  6056763 ggcttaaatatgtctttcgtccctgcaaatataagccatttgaatttt-catccctgtaagttactaatcctttcaatctgcccctgcaaatattaatca 6056665  T
Q  194 tttga 198  Q
    |||||    
T  6056664 tttga 6056660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 33347415 - 33347518
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| |||||||||||||||   ||||||||  |||||| | ||||||||| |||  ||||||| |||| || ||||| |||||||    
T  33347415 aggcttaaatatgtctttcgtccctgcaaatataagtcatttgaa-ctttcgtccctgaagttactaattcttccaatctgcccctacaaatattaatca 33347513  T
Q  194 tttga 198  Q
    |||||    
T  33347514 tttga 33347518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 739602 - 739500
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |  ||| ||| ||||||||||||  |||||||||||| ||| ||||||||||| |||| || |||| || | |||||||| ||||||||    
T  739602 ggcttaaatatgattttcgtctctgcaaatataggtcatttgaatttt-cgtacatgaagttactaatcctttcaatctgtccctgcaaatattaatcat 739504  T
Q  195 ttga 198  Q
    ||||    
T  739503 ttga 739500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 49990180 - 49990133
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||| |||||| |||||||||||||||||| |||||||||||    
T  49990180 ggcttaaatatgtctttcgtccctgcaaatatagactatttgaatttt 49990133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 33030523 - 33030458
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||| ||| ||||||||||||||||| |||||||| ||||||||  ||||||||| ||||    
T  33030523 cttaaataggtttttcgtccctgcaaatatagatcatttgaa-ttttcgtttctgaagttactaatc 33030458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 1047521 - 1047562
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  1047521 gattagtaacttcagagacgaaaattcaaatgacctatattt 1047562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 48381069 - 48380965
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| ||||||| |||||||   ||||| |||||| ||| | | ||||||  |||| ||||||| |||| |||||||| ||||||    
T  48381069 taggcttaaataagtctttcgtccctgtaaatataattcatttaaatttt-cgtccttaaagttattaatccttccaatctgccgctgcaaatattaatc 48380971  T
Q  193 atttga 198  Q
    ||||||    
T  48380970 atttga 48380965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 35311977 - 35312076
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| ||||||  ||||||||  |||||||| |||||||   ||||||||| |||| ||||||| || || ||||||  |||||||||||    
T  35311977 ttaaataggtctttcgtccctataaatataggtcatttgaa-ttttcgtcactgaagttactaatcattccaatctgtcattgcaaaatttaatcatttg 35312075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 5183700 - 5183766
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  ||||| |||||||||  |||||||| ||||||| ||||||||||| ||||    
T  5183700 gcttaaataggtctttcatccctacaaatataggtcatttgaa-ttttcgtccatgaagttactaatc 5183766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 24701463 - 24701510
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||| ||||| ||||||||||||||||  ||||||||||||    
T  24701463 ggcttaaatagctctttcgtccctgcaaatataggtcatttgaatttt 24701510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 37152469 - 37152535
Alignment:
Q  131 catttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||  |||||||  |||||||||||    
T  37152469 catttgaatttt-cgtccatgaagttactaatccttccaatatgcccttgcaaatactaatcatttga 37152535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 46364769 - 46364835
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  46364769 gcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 46364835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 29980832 - 29980878
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||    
T  29980832 gcttaaataggtctttcatccctgcaaatataggtcatttgaatttt 29980878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 33347610 - 33347656
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||    
T  33347610 gcttaaataggtctttcatccctgcaaatataggtcatttgaatttt 33347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 35312042 - 35312000
Alignment:
Q  219 tgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||| |||||||||| |||||| ||||||||    
T  35312042 tgattagtaacttcagtgacgaaaattcaaatgacctatattt 35312000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 46544828 - 46544786
Alignment:
Q  219 tgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||    
T  46544828 tgattagtaacttcaaagacgaaaattcaaatgacctatattt 46544786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 2953781 - 2953822
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  2953781 gattagtaacttcagggacgaaaattcaaatgacctatattt 2953822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 5926586 - 5926545
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  5926586 gattagtaacttcagggacgaaaattcaaatgacctatattt 5926545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 24701337 - 24701296
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  24701337 gattagtaacttcagggacgaaaattcaaatgagctatattt 24701296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 37152855 - 37152896
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| |||||  ||||||||    
T  37152855 gattagtaacttcagagacgaaaattcaaatggactatattt 37152896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 46364641 - 46364600
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  46364641 gattagtaacttcagggacgaaaattcaaatgacctatattt 46364600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 48380748 - 48380707
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  48380748 gattagtaacttcagcgacgaaaattcaaatgacctatattt 48380707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 26953297 - 26953341
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||  |||||||||||||||  ||||||||||||    
T  26953297 ttaaataggtctttcatccctgcaaatataggtcatttgaatttt 26953341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 33030400 - 33030360
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  33030400 attagtaacttcagggacgaaaattcaaatgacctatattt 33030360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 34176119 - 34176163
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||||||| |||||||||||||||   ||||||||||||    
T  34176119 ttaaataggtctttcgtccctgcaaatataagtcatttgaatttt 34176163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 96 - 261
Target Start/End: Complemental strand, 37678231 - 37678067
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||||||||||||| |||||||||||||||  |||||| |||||| ||| | ||||||||| |||| ||||||| ||||||||||||| |||||||||    
T  37678231 gcttaaataggtctttcgtccctgcaaatataagccatttaaatttt-cgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatt 37678133  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  37678132 tgaaaaatggttctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 37678067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 8286931 - 8287097
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||| |||   ||||||||  |||| ||||| | ||||| ||||||| |||||||    
T  8286931 aggcttaaataggtctttcgtccctgcaaatataagccatttgaatttt-cgtctctgaagttaataatccttccattttgccattgcaaatattaatca 8287029  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  8287030 tttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 8287097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 35731042 - 35730880
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||| ||||||||| ||||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||| |||| || ||||||| |||||||||||    
T  35731042 ttaagtaggtctttcgtccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccattatgtcattgcaaatattaatcatttg 35730944  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  35730943 aaaaatagtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatattt 35730880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 54961430 - 54961596
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||| |||| |||||||||||| |||||||| |||||||    
T  54961430 aggcttaaataggtctttcgtccctgcaaatatagaccatttgaa-ttttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatca 54961528  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    |  || |||||||||||||||||||||||||| || ||||||| || ||| ||||||||    
T  54961529 tttgacttttgatcataattacatctgattagtaacttcagtgatgaaaattcaagtgacctatattt 54961596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 261
Target Start/End: Complemental strand, 22250121 - 22249952
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||||||| ||| | |||| |||| |||  |||||||||||| |||||||| ||||    
T  22250121 tttaggcttaaatatgtctttcgtccctgcaaatataggccatttgaatttt-cgtccctgaaattactaattcttccaatatgcccctgcaaatattaa 22250023  T
Q  191 tcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||    | |||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||    
T  22250022 tcatttgacttttagtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatattt 22249952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 95 - 261
Target Start/End: Original strand, 12691406 - 12691571
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||| ||| | ||||||||| |||| ||||||| || | || ||||| ||||||||    
T  12691406 ggcttaaataggtctttcgtccatgcaaatataggccatttgaatttt-cgtccctgaagttactaatccttccaatctgtccctacaaatattaatcat 12691504  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  12691505 ttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 12691571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 261
Target Start/End: Original strand, 32846363 - 32846527
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||||||||||||| || | ||||||||||| ||||||||||||| ||||| ||||||||  |||| ||||| | ||||| ||||||| |||||||||    
T  32846363 gcttaaataggtctttcgtgcttgcaaatataggccatttgaatttt-cgttcctgaagttattaatccttccattttgccattgcaaatattaatcatt 32846461  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||| ||| ||||||||||| |||||||||| ||| |||||||||| ||||| || ||||||    
T  32846462 tgaaaaatggtcttaattacatcttattagtaactccagggacgaaaattcaaatggtcgatattt 32846527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 245
Target Start/End: Complemental strand, 19917040 - 19916891
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||| ||| ||||||||||||||||  ||||| |||||| |||   ||||||||| |||| || |||| ||||||||||||| ||||||||    
T  19917040 ggcttaaataggtttttcgtccctgcaaatataggtcatttaaatttt-cgtctttgaagttactaatcatttcaatctgccactgcaaatattaatcat 19916942  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatt 245  Q
    ||||||||| ||| |||||||||||||||||||| ||||| ||||||||||    
T  19916941 ttgaaaaatggtcataattacatctgattagtaatttcagggacgaaaatt 19916891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 261
Target Start/End: Original strand, 47862152 - 47862317
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||||||||||  ||||||||||||||   |||||||||||| |||   ||||||||| |||| ||||||| |||| ||||||||  |||||||    
T  47862152 ggcttaaataggtctttcatccctgcaaatatatgtcatttgaatttt-cgtctctgaagttactaatccttccaatctgcccctgcaaatactaatcat 47862250  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  47862251 ttgactttttgtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 47862317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 94 - 252
Target Start/End: Complemental strand, 50246243 - 50246085
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||| |||||  |||||||||||||||  |||||||||||| ||| ||||||||||| |||| ||||||| || |||||||||| |||||||    
T  50246243 aggcttaaatagatctttcatccctgcaaatataggtcatttgaatttt-cgtccatgaagttactaatccttccaatctgtcactgcaaatattaatca 50246145  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttca-gagacgaaaatttaaatga 252  Q
    |||||||||| ||  ||||| ||| ||||||||||||||| | |||||||||| ||||||    
T  50246144 tttgaaaaatggttttaattgcatttgattagtaacttcaggggacgaaaattcaaatga 50246085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 261
Target Start/End: Original strand, 27813051 - 27813213
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    |||||||| ||||||||||||||||||||||   |||||||||||||  | |||||||||||  ||| ||||| | || || |||||||  |||||||||    
T  27813051 cttaaataagtcttttgtccctgcaaatataagtcatttgaattttta-tccatgaagttactgatccttccattttgtcattgcaaatactaatcattt 27813149  T
Q  197 gaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||| || |||||||||||||||||| | |||||| |||||||||| |||||||||||||||    
T  27813150 gaaaaatggttctaattacatctgattag-atcttcagggacgaaaattcaaatgatctatattt 27813213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 261
Target Start/End: Original strand, 47980687 - 47980850
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| | |||||||||  ||| ||||||| |  | |||||||| ||||||||||    
T  47980687 cttaaataggtctttcgtccctgcaaatatagaccatttgaa-ttttcgtccctgaagttactgatccttccaatctatccctgcaaatattaatcattt 47980785  T
Q  197 gaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||    |  ||||||||||||||||||||||||||||  |||||||||| |||||| || |||||    
T  47980786 gacttttgatcctaattacatctgattagtaacttcatggacgaaaattcaaatgacctgtattt 47980850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 261
Target Start/End: Original strand, 33294144 - 33294309
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| || |||||||| |||||||||||   |||||||||||| || ||||||||||| |||| ||||||| |||| |||||||| ||||||||    
T  33294144 ggcttaaatatgttttttgtccatgcaaatataggttatttgaattttt-gtccatgaagttactaatccttccaatttgcccctgcaaatattaatcat 33294242  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    || |    | ||| |||||||||||||||||||||||| | |||||||||| |||||| ||||||||    
T  33294243 ttaacttttggtcataattacatctgattagtaacttccgggacgaaaattcaaatgacctatattt 33294309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 258
Target Start/End: Original strand, 20600937 - 20601109
Alignment:
Q  86 ttatattta-ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaa 184  Q
    ||||||||| ||| || |||||||||| |||||| |||||||||  |||||||||||| ||||  ||||||| | |||  ||||||| |||||||||||     
T  20600937 ttatatttaaggcatacataggtctttcgtcccttcaaatataggtcatttgaatttt-cgtttttgaagttgctaattcttccaatttgccactgcaac 20601035  T
Q  185 tgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctata 258  Q
    | ||||| ||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||  ||||| |||||    
T  20601036 tattaataatttgaaaaattgtcctaactacatcttattaataacttcagggacgaaaattcgaatgacctata 20601109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 233
Target Start/End: Complemental strand, 13872453 - 13872316
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| |||||||||||||||| | |||||||||||| || | ||||||||| |||  ||||||| |||| |||||||| ||||||||    
T  13872453 ggcttaaatatgtctttcgtccctgcaaatatagtctatttgaattttt-gtccctgaagttactaattcttccaatctgcccctgcaaatattaatcat 13872355  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttca 233  Q
    ||||    | |||||||||||||||||||||||||||||    
T  13872354 ttgacttttggtcctaattacatctgattagtaacttca 13872316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 26601424 - 26601295
Alignment:
Q  131 catttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaact 230  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||  ||||||| ||||||||||||    | |||||||||||||||||||| |||||    
T  26601424 catttgaatttt-cgtccatgaagttactaatcattccaatatgcccatgcaaatattaatcatttgacttttggtcctaattacatctgattaataact 26601326  T
Q  231 tcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| ||||||  |||||||    
T  26601325 tcagagacgaaaattcaaatgacttatattt 26601295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 261
Target Start/End: Original strand, 34238474 - 34238635
Alignment:
Q  99 taaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    ||||||||||||| |||| || |||||||| | ||||||||||| |||   ||||||||| |||| || ||||||||| |||||||| ||||||||||||    
T  34238474 taaataggtctttcgtccttgtaaatataggctatttgaatttt-cgtctctgaagttactaatcctttcaatatgcccctgcaaatattaatcatttga 34238572  T
Q  199 aaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
        | ||| |||||||||||||||||||||||||| |||||||||| |||||| ||| ||||    
T  34238573 cttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctaaattt 34238635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 8287318 - 8287215
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| ||||||| | ||||||||| |||| ||||||| ||||||||||||  |||||||    
T  8287318 aggcttaaataggtctttcgtccctgcaaatataggccatttgaa-ttttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatca 8287220  T
Q  194 tttga 198  Q
    |||||    
T  8287219 tttga 8287215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 53559772 - 53559669
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||| ||||||| | ||||||||| |||| ||||||| |||| |||||||| |||||||    
T  53559772 aggcttaaatatgtctttcgtccctgcaaatataggccatttgaa-ttttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaatca 53559674  T
Q  194 tttga 198  Q
    |||||    
T  53559673 tttga 53559669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 53559441 - 53559552
Alignment:
Q  150 tgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaa 249  Q
    ||||||||  |||| ||||||| |||| |||||||| ||||||||||||    | |||||||||||||||||||||||||||||| |||||||||| |||    
T  53559441 tgaagttattaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaa 53559540  T
Q  250 tgatctatattt 261  Q
    ||| ||||||||    
T  53559541 tgacctatattt 53559552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 22249732 - 22249835
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| || ||| ||||||||||||||||| |||||||| ||||||| ||||||||||| |||| || |||| |||| |||||||| |||||||    
T  22249732 aggcttaaatatgtttttcgtccctgcaaatatagatcatttgaa-ttttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatca 22249830  T
Q  194 tttga 198  Q
    |||||    
T  22249831 tttga 22249835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 47982020 - 47981918
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| |||||||||||||||||| ||||||| |||||||   ||||||||| |||| ||||||| |||| |||||||| ||||||||    
T  47982020 ggcttaaatatgtctttcgtccctgcaaatatagactatttgaa-ttttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcat 47981922  T
Q  195 ttga 198  Q
    ||||    
T  47981921 ttga 47981918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 50245855 - 50245959
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||| |||||||| ||||| ||||||| ||||||||  |||||||||||| | | ||||||||||| |||| ||||||| ||||||||||||| ||||||    
T  50245855 taggtttaaatagatctttcgtccctgtaaatataggtcatttgaatttt-catccatgaagttactaatcattccaatctgccactgcaaatattaatc 50245953  T
Q  193 atttga 198  Q
    ||||||    
T  50245954 atttga 50245959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 37677839 - 37677950
Alignment:
Q  87 tatattta-ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaat 185  Q
    |||||||| |||||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| |||| |||| || ||||||||||||     
T  37677839 tatatttatggcttaaataggtctttcttccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatccttccgatctgccactgcaaaa 37677937  T
Q  186 gttaatcatttga 198  Q
     ||||||||||||    
T  37677938 tttaatcatttga 37677950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 20086738 - 20086656
Alignment:
Q  179 tgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||| ||||||||||||    |||||||||||||||||||||||||||||||| |||||||||| ||| || ||||||||    
T  20086738 tgcaaatattaatcatttgactttttgtcctaattacatctgattagtaacttcagggacgaaaattcaaaggacctatattt 20086656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 47862538 - 47862434
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    ||||||||||||| |||||| |||| || |||||||| ||||||||||||| ||| ||||||||||| |||| ||| ||| |||| |||||||| |||||    
T  47862538 ttaggcttaaatatgtctttcgtcc-tgtaaatataggccatttgaatttt-cgtccatgaagttactaatccttctaatttgcccctgcaaatattaat 47862441  T
Q  192 catttga 198  Q
    |||||||    
T  47862440 catttga 47862434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 33294529 - 33294425
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| ||||||  ||||||||||||||| | ||||||| ||||||| | ||||||||| |||| |||| || |||| |||||||| ||||||    
T  33294529 taggcttaaatatgtctttcctccctgcaaatataggcaatttgaa-ttttcgtccctgaagttactaatccttccgatctgcccctgcaaatattaatc 33294431  T
Q  193 atttga 198  Q
    ||||||    
T  33294430 atttga 33294425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 12691786 - 12691687
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||| |||||| ||||||||||||||||  ||||||||||||| || | ||||||||| |||| |||||||  ||| |||||||| |||||||||||    
T  12691786 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttt-gtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttg 12691688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 13872069 - 13872171
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| ||||||||||||||||   ||||||| ||||||| ||||||||||  |||| ||||||||||||  |||||||  |||||||    
T  13872069 ggcttaaatatgtctttcgtccctgcaaatataggttatttgaa-ttttcgtccatgaagttattaatccttccaatatgcccttgcaaatactaatcat 13872167  T
Q  195 ttga 198  Q
    ||||    
T  13872168 ttga 13872171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 20086434 - 20086539
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    ||||||||||||| |||||| ||| ||  ||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| |||||    
T  20086434 ttaggcttaaatatgtctttcgtctctataaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaat 20086532  T
Q  192 catttga 198  Q
    |||||||    
T  20086533 catttga 20086539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 261
Target Start/End: Original strand, 48507505 - 48507579
Alignment:
Q  187 ttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||| |||||||| || |||||||||||| ||||||||||||||||| |||||||||| ||||||  |||||||    
T  48507505 ttaataatttgaaatatggtcctaattacacctgattagtaacttcagggacgaaaattcaaatgacttatattt 48507579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 19916667 - 19916758
Alignment:
Q  106 gtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    |||||| ||||||||||||||||  ||||| |||||| ||  | ||||||||| |||| ||||||| ||||||||||||| ||||||||||||    
T  19916667 gtctttcgtccctgcaaatataggtcatttaaatttt-cgcccctgaagttactaatccttccaatctgccactgcaaatattaatcatttga 19916758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 489513 - 489402
Alignment:
Q  151 gaagttaccaatctttccaatatgccactgcaaatgttaatcatttga-aaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaa 249  Q
    |||||||| |||| ||||| | ||||| ||||||| |||||||||||| ||||| ||| ||||||||| |||||||||| || || |||| ||||| |||    
T  489513 gaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaaatggtcataattacatatgattagtaaatttagggacggaaattcaaa 489414  T
Q  250 tgatctatattt 261  Q
     || ||||||||    
T  489413 cgacctatattt 489402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 515305 - 515194
Alignment:
Q  151 gaagttaccaatctttccaatatgccactgcaaatgttaatcatttga-aaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaa 249  Q
    |||||||| |||| ||||| | ||||| ||||||| |||||||||||| ||||| ||| ||||||||| |||||||||| || || |||| ||||| |||    
T  515305 gaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaaatggtcataattacatatgattagtaaatttagggacggaaattcaaa 515206  T
Q  250 tgatctatattt 261  Q
     || ||||||||    
T  515205 cgacctatattt 515194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 27813239 - 27813192
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  27813239 ggcttaaataggtctttcgtccctgcaaatatagatcatttgaatttt 27813192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 37678041 - 37678108
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  37678041 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 37678108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 48507798 - 48507699
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| |||||| |||||||||  |||||||| |||||||   ||||||||| |||| ||||||| ||||||  ||||  |||||||||||    
T  48507798 ttaaataggtctttcgtccctacaaatataggtcatttgaa-ttttcgtctctgaagttactaatccttccaatctgccacaacaaaatttaatcatttg 48507700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 45199137 - 45199239
Alignment:
Q  105 ggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaatt 204  Q
    ||||||| ||||| ||||||||| | ||| |||||||| |||   ||||||||| |||| || ||||||| || ||||||| |||||||||||||||||     
T  45199137 ggtctttcgtccccgcaaatataaatcatctgaatttt-cgtctctgaagttactaatcctttcaatatgacagtgcaaatattaatcatttgaaaaatg 45199235  T
Q  205 gtcc 208  Q
    ||||    
T  45199236 gtcc 45199239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 19916972 - 19917014
Alignment:
Q  219 tgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||||||||||| ||||||||    
T  19916972 tgattagtaacttcaaagacgaaaatttaaatgacctatattt 19917014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 48507734 - 48507775
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  48507734 gattagtaacttcagagacgaaaattcaaatgacctatattt 48507775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 54961813 - 54961713
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    |||||||| |||||| ||||||||||||||||  |||||||| |||| || | ||||||||| |||| || |||| |||| | | |||| ||||||||||    
T  54961813 cttaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttagtccctgaagttactaatcctttcaatctgcccccgtaaatattaatcattt 54961715  T
Q  197 ga 198  Q
    ||    
T  54961714 ga 54961713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 8287123 - 8287056
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| || |||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  8287123 ggcttaaataggtctttcgttcctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 8287056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 34238781 - 34238821
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  34238781 attagtaatttcagggacgaaaatttaaatgatctatattt 34238821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 35730661 - 35730709
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||||||||||| |||||||||||||||   ||||||||||||    
T  35730661 aggcttaaataggtctttcgtccctgcaaatataagtcatttgaatttt 35730709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 47862342 - 47862276
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  47862342 gcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 47862276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 47980875 - 47980809
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||| ||  |||||||| ||||||| ||||||||||| ||||    
T  47980875 gcttaaataggtctttcatccctgcaaatacaggtcatttgaa-ttttcgtccatgaagttactaatc 47980809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 489376 - 489422
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaattt 141  Q
    ||||||||||||||||| ||||||||||||||||  | |||||||||    
T  489376 ggcttaaataggtctttcgtccctgcaaatataggtcgtttgaattt 489422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 515168 - 515214
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaattt 141  Q
    ||||||||||||||||| ||||||||||||||||  | |||||||||    
T  515168 ggcttaaataggtctttcgtccctgcaaatataggtcgtttgaattt 515214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 19916723 - 19916682
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| | ||||||||||||||| ||||||||    
T  19916723 gattagtaacttcaggggcgaaaatttaaatgacctatattt 19916682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 20086504 - 20086463
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  20086504 gattagtaacttcagggacgaaaattcaaatgacctatattt 20086463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 22249800 - 22249759
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||  |||||||||| |||||||||||||||    
T  22249800 gattagtaacttcatggacgaaaattcaaatgatctatattt 22249759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 27813436 - 27813349
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaa 184  Q
    |||||||||| |||||| |||||||||| ||||  ||||||||||||  ||  | ||||||||| |||| ||||||| ||||||||||||    
T  27813436 ggcttaaataagtctttcgtccctgcaa-tatacgccatttgaatttc-cgcccctgaagttactaatccttccaatctgccactgcaaa 27813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 35730978 - 35731019
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  35730978 gattagtaacttcagggacgaaaattcaaatgacctatattt 35731019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 37677915 - 37677874
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  37677915 gattagtaacttcagggacgaaaattcaaatgacctatattt 37677874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 45199194 - 45199153
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| | ||||| |||||||    
T  45199194 gattagtaacttcagagacgaaaattcagatgatttatattt 45199153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 47862219 - 47862178
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| ||||||  |||||||    
T  47862219 gattagtaacttcagagacgaaaattcaaatgacatatattt 47862178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 47981953 - 47981994
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| ||||  |||||||||    
T  47981953 gattagtaacttcagagacgaaaattcaaatagtctatattt 47981994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 54961498 - 54961457
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| ||||| |||||||||    
T  54961498 gattagtaacttcagggacgaaaattcaaatggtctatattt 54961457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 19740860 - 19740927
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| |||| ||||||||||   |||||||| ||||||| | ||||||||| ||||    
T  19740860 ggcttaaataggtctttcgtccttgcaaatatatgtcatttgaa-ttttcgtccctgaagttactaatc 19740927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 35730854 - 35730921
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||| ||||| |||| |||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  35730854 ggcttaaatagttctttcgtccatgcaaatataggtcatttgaa-ttttcgtccttgaagttactaatc 35730921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 9e-48; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 85 - 261
Target Start/End: Original strand, 20947183 - 20947358
Alignment:
Q  85 attatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaa 184  Q
    |||| ||||||| |||||||||||||| |||||| |||||||||  |||||||||||| ||| ||||||||||| |||| ||||||| ||||||| ||||    
T  20947183 attaaatttaggtttaaataggtctttcgtcccttcaaatataggtcatttgaatttt-cgtccatgaagttactaatccttccaatctgccactacaaa 20947281  T
Q  185 tgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    | ||||||||||||||||| ||| |||||||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  20947282 tattaatcatttgaaaaatggtcataattacatctgattagtaacttcaaggacgaaaattcaaatgacctatattt 20947358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 95 - 260
Target Start/End: Complemental strand, 5280655 - 5280491
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||| ||| | ||||||||| |||| ||  ||| || || ||||||| ||||||||    
T  5280655 ggcttaaataggtcttttgtccttgcaaatataggtcatttgaatttt-cgtccctgaagttactaatcctttgaatctgtcattgcaaatattaatcat 5280557  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatatt 260  Q
    ||||||||| |||||||| ||||||||||||||| ||||  |||||||||| ||||| ||||||||    
T  5280556 ttgaaaaatggtcctaatcacatctgattagtaagttcaaggacgaaaattcaaatggtctatatt 5280491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 43938280 - 43938113
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| |||| ||||||||||  ||||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| ||||||    
T  43938280 taggcttaaatatgtctttcgtccttgcaaatataagccatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaatc 43938182  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||    | ||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  43938181 atttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatattt 43938113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 261
Target Start/End: Complemental strand, 12928429 - 12928258
Alignment:
Q  89 tatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgtt 188  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||| ||  ||| |||| |||||||| |     
T  12928429 tatttaagcttaaataggtcttttgtccctgcaaatatagaccatttgaa-ttttcgtccttgaagttactaatccttttaatctgccgctgcaaatatc 12928331  T
Q  189 aatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||    | || |||||||||| |||||||| ||||||| |||||||||| ||||||  |||||||    
T  12928330 aatcatttgacttttggttctaattacatgtgattagtgacttcagggacgaaaattcaaatgacttatattt 12928258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 5636026 - 5636190
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||| ||  ||||||||||||||||  |||||||||||| ||| | | ||||||| |||| ||||| | ||||| ||||||| |||||||    
T  5636026 aggcttaaataggtattc-gtccctgcaaatataggtcatttgaatttt-cgtccctaaagttactaatccttccatt-tgccattgcaaatattaatca 5636122  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||| ||||||||||||||| |||||||||||||| |||||||||| ||||||  |||||||    
T  5636123 tttgaaaaatggtcctaattacatctaattagtaacttcagggacgaaaattcaaatgacttatattt 5636190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 27557851 - 27558013
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||| |||||||| ||||||| ||||||||  |||||||||||| ||| | ||||||||  |||  ||||| | ||||| ||||||| |||||||||||    
T  27557851 ttaaacaggtctttcgtccctgtaaatataggtcatttgaatttt-cgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttg 27557949  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| ||| |||||||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  27557950 aaaaatggtcttaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatattt 27558013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 34454865 - 34454699
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||||| ||||  |||||||||||||||| |||||||||||| ||| | ||||||||| |||  || |||| |||| |||||||| |||||||    
T  34454865 aggcttaaataggactttcatccctgcaaatatagatcatttgaatttt-cgtccctgaagttactaattctttcaatctgcccctgcaaatattaatca 34454767  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | || ||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  34454766 tttgacttttggttctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 34454699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 37563739 - 37563573
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||| |||||||| ||||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| ||||||     
T  37563739 aggcttaaatatgtctttcgtccctgtaaatataggccatttgaatttt-cgtccctgaagttactaatccttccaatttgcccctgcaaatattaatct 37563641  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | |||||||| ||||||||||||||||||||| |||||||||| |||||  ||||||||    
T  37563640 tttgacttttggtcctaatcacatctgattagtaacttcagggacgaaaattcaaatgccctatattt 37563573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 261
Target Start/End: Complemental strand, 12929650 - 12929473
Alignment:
Q  83 ttattatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgca 182  Q
    ||||| |||||||||||||||| |||||| |||||||||||||| |  |||||||||||  ||| | |||||| || |||| ||||||| ||||  ||||    
T  12929650 ttattttatttaggcttaaatatgtctttcgtccctgcaaatattggtcatttgaatttc-cgtccctgaagtgactaatccttccaatctgcccgtgca 12929552  T
Q  183 aatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||| ||||||||||||    | |||||||||||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  12929551 aatattaatcatttgacttttggtcctaattacatctgattagtaacttcatggacgaaaattcaaatgacctatattt 12929473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 15828036 - 15827940
Alignment:
Q  165 ttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||    
T  15828036 ttccaatttgccactgcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatggcctatattt 15827940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 19980004 - 19980115
Alignment:
Q  150 tgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaa 249  Q
    ||||||||| |||| ||||| | ||||  ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||  |||||||||| |||    
T  19980004 tgaagttactaatcattccattttgccgttgcaaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcaaggacgaaaattcaaa 19980103  T
Q  250 tgatctatattt 261  Q
    ||||||||||||    
T  19980104 tgatctatattt 19980115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 26826015 - 26825849
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| || ||||||||||||   |||||||| ||||||| ||||||||||  |||| || |||| |||| |||||||| |||||||    
T  26826015 aggcttaaataggtctttcgttcctgcaaatatatgtcatttgaa-ttttcgtccatgaagttattaatcctttcaatctgcccctgcaaatattaatca 26825917  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | ||  |||||| ||||||||||||||||||| |||||||||| |||||| ||||||||    
T  26825916 tttgacttttggttataattatatctgattagtaacttcagggacgaaaattcaaatgacctatattt 26825849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 45586691 - 45586590
Alignment:
Q  160 aatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatat 259  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  |||||||||| |||||| ||||||    
T  45586691 aatccttccaatccgccagtgcaaatgttaatcatttgaaaaatggtcctaattacatatgattagtaacttcaaggacgaaaattcaaatgacctatat 45586592  T
Q  260 tt 261  Q
    ||    
T  45586591 tt 45586590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 261
Target Start/End: Complemental strand, 12931111 - 12930957
Alignment:
Q  106 gtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattg 205  Q
    |||||| |||||||||||||| |  |||||||||||| ||| | ||||||||| |||| ||||||| ||||  ||||||| ||||||||||||    | |    
T  12931111 gtctttcgtccctgcaaatattggtcatttgaatttt-cgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcatttgacttttgg 12931013  T
Q  206 tcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||| |||||||  |||||||||| |||||| ||||||||    
T  12931012 tcctaattacatctgattagaaacttcatggacgaaaattcaaatgacctatattt 12930957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 25049544 - 25049443
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||||||||||||| ||||||| ||||||||  |||||||||||||| | | ||||||||| |||||||||||||||||||||||||  |||||||||    
T  25049544 gcttaaataggtctttcgtccctgtaaatataggtcatttgaatttttc-tccctgaagttactaatctttccaatatgccactgcaaaatttaatcatt 25049446  T
Q  196 tga 198  Q
    |||    
T  25049445 tga 25049443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 5280268 - 5280375
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||| ||||||||  ||||||||| |||| ||||||| |||||||| |||| ||||    
T  5280268 tttaggcttaaataagtctttcgtccctgcaaatataggccatttgaa-ttttcgttactgaagttactaatccttccaatctgccactgtaaatattaa 5280366  T
Q  191 tcatttgaa 199  Q
    | |||||||    
T  5280367 taatttgaa 5280375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 153 - 261
Target Start/End: Complemental strand, 47082174 - 47082066
Alignment:
Q  153 agttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatga 252  Q
    |||||| |||| || |||| ||||||| ||||| |||||||||||||||||  | ||||||||||||||||| ||||||||| |||||||||| ||||||    
T  47082174 agttactaatcctttcaatctgccactacaaatattaatcatttgaaaaatgattctaattacatctgattaataacttcagggacgaaaattcaaatga 47082075  T
Q  253 tctatattt 261  Q
     ||||||||    
T  47082074 actatattt 47082066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 37563350 - 37563456
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| | |||| |||| |||| ||| ||| |||| |||||||| ||||    
T  37563350 tttaggcttaaatatgtcttttgtccctgcaaatataggccatttgaa-ttttcgtccctgaatttactaatccttctaatctgcccctgcaaatattaa 37563448  T
Q  191 tcatttga 198  Q
    ||||||||    
T  37563449 tcatttga 37563456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 44545976 - 44545814
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| |||| |||||||| |   |||||||||||| ||| | ||||||||| |||| ||| | | | ||| ||||||| ||||||||||     
T  44545976 ttaaataggtctttcgtccatgcaaatacaagtcatttgaatttt-cgtccctgaagttactaatccttcaattttaccattgcaaatattaatcatttt 44545878  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| ||||||||||||||| ||||||||||| |   ||||||||| |||||| ||||||||    
T  44545877 aaaaatggtcctaattacatctaattagtaacttaatgaacgaaaattcaaatgacctatattt 44545814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 47121281 - 47121442
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||| | |||||||| || ||||||||  | ||| |||||| ||| | |||||||| ||||| ||||| | | ||| ||||||| ||||| |||||    
T  47121281 ttaaatagattttttgtccttgtaaatataggtcttttaaatttt-cgtccctgaagttatcaatccttccattttcccattgcaaatattaattatttg 47121379  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||||||| |||||| ||||||||    
T  47121380 aaaaatggtcctaattacatttgattag-aacttcagggacgaaaattcaaatgacctatattt 47121442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 27558236 - 27558134
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||||||| ||||||||||||||||  |||||||| ||||||| || |||||||| |||| ||||| | ||||| ||||||| ||||||||    
T  27558236 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcat 27558138  T
Q  195 ttga 198  Q
    ||||    
T  27558137 ttga 27558134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 26825629 - 26825732
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||| ||||||||  |||||||| ||||||| | ||||||||| |||| ||||||| |||| |||||||  |||||||    
T  26825629 aggcttaaatatgtctttcgtccctgtaaatataggtcatttgaa-ttttcgtccctgaagttactaatcattccaatctgcccctgcaaagattaatca 26825727  T
Q  194 tttga 198  Q
    |||||    
T  26825728 tttga 26825732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 43937890 - 43937996
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||||||||||||| |||||| |||| || ||||||||  |||||||||||| | | | ||||||||| |||| ||||||| |||| |||||||| ||||    
T  43937890 tttaggcttaaatatgtctttcgtccttgtaaatataggtcatttgaatttt-catccctgaagttactaatccttccaatctgcccctgcaaatattaa 43937988  T
Q  191 tcatttga 198  Q
    ||||||||    
T  43937989 tcatttga 43937996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 26830122 - 26830025
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    |||||||||||||| |||||| ||| ||||| || ||| |||||| | ||||||||||||| |||| ||||| | ||||||||||||| ||||||||||    
T  26830122 ttaaataggtctttagtccctacaagtataggccgttttaatttt-cattcatgaagttactaatccttccattttgccactgcaaatattaatcattt 26830025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 47121661 - 47121560
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||||||||||||| |||||||||||||| ||||||||||| |||||||   ||||||||| |||  || |||| | ||||||||||  |||||||||    
T  47121661 gcttaaataggtctttcgtccctgcaaatattgaccatttgaa-ttttcgtctctgaagttactaatactttcaatctaccactgcaaaatttaatcatt 47121563  T
Q  196 tga 198  Q
    |||    
T  47121562 tga 47121560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 34454478 - 34454586
Alignment:
Q  89 tatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgtt 188  Q
    |||| ||||||||||| ||| || ||||||||||||||||  |||||||| |||||||   ||||||||| |||| ||||||| | || |||||||| ||    
T  34454478 tattaaggcttaaatatgtccttcgtccctgcaaatataggtcatttgaa-ttttcgtctttgaagttactaatccttccaatctacccctgcaaatatt 34454576  T
Q  189 aatcatttga 198  Q
    ||||||||||    
T  34454577 aatcatttga 34454586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 7159313 - 7159210
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| ||| ||  |||||||||||||||| |||||||| ||||||||| ||||||||| |||| | ||| | | || |||||||| |||||||    
T  7159313 aggcttaaatatgtcattcatccctgcaaatatagatcatttgaa-ttttcgttcctgaagttactaatcctcccattttacc-ctgcaaatattaatca 7159216  T
Q  194 tttgaa 199  Q
    ||||||    
T  7159215 tttgaa 7159210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 35262629 - 35262728
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaa-tatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    |||||||||||||| ||||||||||| ||||| | ||||||||||||   || ||||||||| |||| ||||||| ||||||||||||  ||||||||||    
T  35262629 ttaaataggtctttcgtccctgcaaaatatagtc-atttgaatttttgtctc-tgaagttactaatccttccaatctgccactgcaaaatttaatcattt 35262726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 44545597 - 44545657
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttac 158  Q
    ||||||||||||||||||| ||||||||||||  |||||||| ||||||||| |||||||||    
T  44545597 cttaaataggtcttttgtctctgcaaatataggtcatttgaa-ttttcgttcctgaagttac 44545657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 5636406 - 5636307
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| |||| ||||||||||    ||||||||||| ||| | ||||||||| |||| ||||||| ||||||||||||  ||||| |||||    
T  5636406 ttaaataggtctttcgtccttgcaaatataagtaatttgaatttt-cgtccctgaagttactaatccttccaatctgccactgcaaaatttaattatttg 5636308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 12928036 - 12928138
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||| |||||||||||| ||| ||||| ||||||| | | ||||||| |||| ||||||| ||||| |||| || |||||||    
T  12928036 aggcttaaatatgtctttcgtcgctgcaaatataggccacttgaa-ttttcgtccctaaagttactaatccttccaatctgcca-tgcatatattaatca 12928133  T
Q  194 tttga 198  Q
    |||||    
T  12928134 tttga 12928138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 15827914 - 15827981
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||| |||||| |||||||||||||||| ||||||||| ||||||| | ||||||||| ||||    
T  15827914 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaa-ttttcgtccctgaagttactaatc 15827981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 27558039 - 27557972
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  27558039 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccttgaagttactaatc 27557972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 12929449 - 12929514
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||||||||  |||||||||||||||  |||||||| ||||||| ||||||||||| ||||    
T  12929449 cttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccatgaagttactaatc 12929514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 34454798 - 34454838
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  34454798 attagtaacttcagggacgaaaattcaaatgatctatattt 34454838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 47081846 - 47081949
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| |||||| ||||||||   ||||||||||||    || ||||||||| |||| || |||| ||||| || |||| |||||||    
T  47081846 aggcttaaataggtctttcgtcccttcaaatatatgtcatttgaattttcatctc-tgaagttactaatcctttcaatctgccattgtaaatattaatca 47081944  T
Q  194 tttga 198  Q
    |||||    
T  47081945 tttga 47081949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 19980140 - 19980074
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||||||||| |||| | |||||||||| |||||||| ||||||| | ||||||||| ||||    
T  19980140 gcttaaataggtctttcgtccttccaaatatagatcatttgaa-ttttcgtccttgaagttactaatc 19980074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 34454674 - 34454740
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  34454674 gcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 34454740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 44545788 - 44545850
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttac 158  Q
    ||||||||||||||||| || | |||||||||||  |||||||| ||||||||||| |||||||    
T  44545788 ggcttaaataggtctttcgttcttgcaaatataggtcatttgaa-ttttcgttcattaagttac 44545850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 26825698 - 26825656
Alignment:
Q  219 tgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||| |||||||||| |||||| ||||||||    
T  26825698 tgattagtaacttcagggacgaaaattcaaatgacctatattt 26825656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 5280588 - 5280629
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  5280588 gattagtaacttcagggacgaaaattcaaatgacctatattt 5280629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 7159245 - 7159286
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||  ||||||||| |||||||||||||||    
T  7159245 gattagtaacttcaggaacgaaaattcaaatgatctatattt 7159286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 183
Target Start/End: Complemental strand, 19980274 - 19980190
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaa 183  Q
    ||||||||||||||  || |||||||||||   ||||||||||||| || | ||||||||| |||| || |||| |||||||||||    
T  19980274 ttaaataggtctttcatcactgcaaatataagtcatttgaattttt-gtccttgaagttactaatcatttcaatctgccactgcaa 19980190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 34454551 - 34454510
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||| ||||||||||| |||||| ||||||||    
T  34454551 gattagtaacttcaaagacgaaaattcaaatgacctatattt 34454510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 12929282 - 12929389
Alignment:
Q  90 atttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgtta 189  Q
    ||||||||||||||| |  |||  ||||||||||||||| | ||||| ||||||| | | |||| |||| |||| | ||| | |||| |||||||| |||    
T  12929282 atttaggcttaaatatgcatttcatccctgcaaatataggctatttg-atttttcatccctgaacttactaatcctcccattttgcccctgcaaatatta 12929380  T
Q  190 atcatttga 198  Q
    |||||||||    
T  12929381 atcatttga 12929389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 12930767 - 12930874
Alignment:
Q  90 atttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgtta 189  Q
    ||||||||||||||| |  |||  ||||||||| |||||  ||||||| |||||| | | |||| |||| |||| ||||| | |||| |||||||| |||    
T  12930767 atttaggcttaaatatgcatttcatccctgcaattataggtcatttga-tttttcatccctgaacttactaatccttccattttgcccctgcaaatatta 12930865  T
Q  190 atcatttga 198  Q
    |||||||||    
T  12930866 atcatttga 12930874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 47082043 - 47082087
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||| |||||| ||||||||||||||||  ||||||||||||    
T  47082043 ttaaataagtctttcgtccctgcaaatatagttcatttgaatttt 47082087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 47121596 - 47121636
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||||||||||||| ||||| || ||||||    
T  47121596 attagtaacttcagagacgaaaattcaaatggtcaatattt 47121636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 32337567 - 32337729
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||| |||| |||||||||||| |||||||| |||||||||||    
T  32337567 ttaaataggtctttcgtccctgcaaatatagaccatttgaa-ttttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttg 32337665  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |    | | ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  32337666 acttttgggcctaattacatctgattagtaacttcagagacgaaaattcaaatgacctatattt 32337729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 91 - 261
Target Start/End: Original strand, 13480204 - 13480373
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| ||||    
T  13480204 tttaggcttaaatatgtctttcgtccctgcaaatataggccatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaa 13480302  T
Q  191 tcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||    | ||||||||||||||| |||||||||||||| |||||||||| |||||| ||||||||    
T  13480303 tcatttgacttttggtcctaattacatctaattagtaacttcagggacgaaaattcaaatgacctatattt 13480373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 7612546 - 7612713
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||| |||  || || | || || ||||||| ||||||    
T  7612546 taggcttaaataggtctttcgtccctgcaaatatagaccatttgaatttt-cgtccctgaagttactaattctttcattttgtcattgcaaatattaatc 7612644  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||| ||||||  |||||||    
T  7612645 atttgaaaaatggtcctaattacatctgattagtaattccagggacgaaaattcaaatgacttatattt 7612713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 19296608 - 19296446
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| |||| ||||||||||   |||||||||||| ||||| ||||||||| ||| || ||||| | ||||||||||| |||||||||||    
T  19296608 ttaaataggtctttcgtccttgcaaatatatgtcatttgaatttt-cgttcctgaagttactaattttgccaatctaccactgcaaatattaatcatttg 19296510  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| |||||||||||||||||||||||||||||  || ||||||| |||||| ||||||||    
T  19296509 aaaaatggtcctaattacatctgattagtaacttcatggatgaaaattcaaatgacctatattt 19296446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 26542613 - 26542782
Alignment:
Q  94 aggcttaaataggtcttttgtccctg--caaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgtt-aa 190  Q
    |||||||||||||| ||| ||||||   ||||||||   |||||||||||| ||| | ||||||||| |||| || |||| ||||||||||||| || ||    
T  26542613 aggcttaaataggtttttcgtccctttacaaatatatgtcatttgaatttt-cgtccctgaagttactaatcatttcaatctgccactgcaaatatttaa 26542711  T
Q  191 tcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  26542712 tcatttgaaaaatcgtcctaattacatctgattagtaacttcagggacgaaaattcaaatgatctatattt 26542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 3299942 - 3299782
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| || ||| ||||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| ||||| ||||||| |||||||||    
T  3299942 gcttaaatatgtatttcgtccctgcaaatataggtcatttgaatttt-cgtccttgaagttactaatccttccaatctgccattgcaaatattaatcatt 3299844  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctat 257  Q
    |||||||| || ||||||||||||||||||||||||||  || ||||||| |||||| ||||    
T  3299843 tgaaaaatggttctaattacatctgattagtaacttcatggatgaaaattcaaatgacctat 3299782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 261
Target Start/End: Original strand, 23291745 - 23291909
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| |||||| |||||| ||||||||| ||||||||||||| | | | ||||||||| |||| ||||||| |||| |||||||| |||||||||    
T  23291745 gcttaaatatgtctttcgtccctacaaatataggccatttgaatttt-catccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 23291843  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  23291844 tgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 23291909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 5064716 - 5064554
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||| |||||| ||| |||||||||||| ||||||||||||| ||| | ||| ||||| |||| ||||||| |||| |||||||| |||||||||||    
T  5064716 ttaaatatgtctttcgtctctgcaaatataggccatttgaatttt-cgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcatttg 5064618  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |    | ||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  5064617 acttttggtcctaattacatctaattagtaacttcagggacgaaaattcaaatgatctatattt 5064554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 31879461 - 31879622
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| |||||||||||||| | | ||||||||||| ||| |  |||||||| |||||||||| | ||||| ||||||| ||||| |||||    
T  31879461 ttaaataggtctttcgtccctgcaaatatggtc-atttgaatttt-cgtccccgaagttactaatctttccattttgccattgcaaatattaataatttg 31879558  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| |||||||||||||||||| | ||||||||| |||||||||| |||||| ||||||||    
T  31879559 aaaaatggtcctaattacatctgataattaacttcagggacgaaaattcaaatgacctatattt 31879622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 738081 - 737916
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| ||||||||||||||||  |||||||||||| ||| ||||||||||| |||| ||||||| |||| || ||| | ||||||||    
T  738081 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaatttt-cgtccatgaagttactaatccttccaatctgccccttcaagtattaatcat 737983  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    | ||||||||||||||||||||||||||||||  | ||||||| |||||| ||||||||    
T  737982 ttgacttttggtcctaattacatctgattagtaacttcaggaatgaaaattcaaatgacctatattt 737916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 26503416 - 26503529
Alignment:
Q  148 catgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaattta 247  Q
    ||||||||||| |||| || |||| | ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |    
T  26503416 catgaagttactaatcctttcaatctaccactgcaaatataaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattca 26503515  T
Q  248 aatgatctatattt 261  Q
    ||||| ||||||||    
T  26503516 aatgacctatattt 26503529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 261
Target Start/End: Complemental strand, 3586591 - 3586430
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||| ||| ||   | |||| | || ||||| | ||||| ||||||| |||||||||    
T  3586591 gcttaaacaggtctttcgtccctgcaaatatagactatttgaatttt-cgtcca---aattactattccttccattttgccattgcaaatattaatcatt 3586496  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    | |||||| ||| ||||||||||||||||||||||| || |||||||||| |||||| ||||||||    
T  3586495 taaaaaatggtcataattacatctgattagtaactttagggacgaaaattcaaatgacctatattt 3586430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 21880748 - 21880583
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||||||| |||||| ||||||||  | ||||||||||| ||| | ||||||||| |||| ||||||| |  | |||||||| |||| |||    
T  21880748 ggcttaaataggtctttcgtccctccaaatatatgcaatttgaatttt-cgtccctgaagttactaatccttccaatctatccctgcaaatattaagcat 21880650  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  21880649 ttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 21880583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 261
Target Start/End: Complemental strand, 1066497 - 1066358
Alignment:
Q  121 aaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctg 220  Q
    ||||||||| |||||||||||| ||| | ||||||||| ||| |||||| | ||||| ||||||| ||||||||||||||||| ||| |||||| || ||    
T  1066497 aaatatagatcatttgaatttt-cgtccctgaagttactaatatttccattttgccattgcaaatattaatcatttgaaaaatagtcataattatatttg 1066399  T
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||  | || ||||||| |||||| ||||||||    
T  1066398 attagtaacttttgggatgaaaattcaaatgacctatattt 1066358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 31386797 - 31386963
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||| |||  |||||| ||||||||   |||||||| || ||| | ||||||| | |||| ||||| | ||| | ||||||| ||||||    
T  31386797 taggcttaaataggtgtttcatccctgtaaatataggatatttgaatatt-cgtccttgaagttgctaatccttccattttgcaattgcaaatattaatc 31386895  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||  ||||||||||||||| ||||||||||||| || ||||||| |||||| ||||||||    
T  31386896 atttgaaaaatgatcctaattacatctggttagtaacttcag-gatgaaaattcaaatgacctatattt 31386963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 20774092 - 20774254
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||||||||||  ||| | ||||||||   |||||||||||| ||| | ||||||||  |||| || || | || || ||||||| |||||||||||    
T  20774092 ttaaataggtctttcatccttacaaatatatgtcatttgaatttt-cgtccttgaagttattaatcctttcattttgtcattgcaaatattaatcatttg 20774190  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| |||||||||||||||||||||||| ||||  |||||||||| ||||||  |||||||    
T  20774191 aaaaatggtcctaattacatctgattagtaatttcatggacgaaaattcaaatgacttatattt 20774254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 261
Target Start/End: Complemental strand, 20561314 - 20561146
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||||| |||||||||||||| |||  || |||||||   |||||||||||| ||| | ||| ||||  |||| ||||||| |||| |||||||| ||||    
T  20561314 tttaggattaaataggtctttcgtct-tgtaaatatatgtcatttgaatttt-cgtccttgatgttattaatccttccaatctgcccctgcaaatattaa 20561217  T
Q  191 tcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||    | |||||||||||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  20561216 tcatttgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatattt 20561146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 196
Target Start/End: Original strand, 3299555 - 3299659
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    ||||||||||||||||||||| ||| |||||||||||   |||||||||||| ||| ||||||||||| |||| ||||||| ||||| ||||||| ||||    
T  3299555 tttaggcttaaataggtctttcgtctctgcaaatataagtcatttgaatttt-cgtccatgaagttactaatcattccaatttgccattgcaaatattaa 3299653  T
Q  191 tcattt 196  Q
    ||||||    
T  3299654 tcattt 3299659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 16704694 - 16704610
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccact 179  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| ||||||| | ||||||||| |||| ||||||| |||||||    
T  16704694 aggcttaaataggtctttcgtccctgcaaatataggccatttgaa-ttttcgtccttgaagttactaatccttccaatctgccact 16704610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 261
Target Start/End: Original strand, 22493907 - 22494045
Alignment:
Q  121 aaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctg 220  Q
    ||||||||  |||||||||||| ||| | ||||||||| ||||||| |||| | || |||||||| ||||||||||||    | ||||||||||||| ||    
T  22493907 aaatataggtcatttgaatttt-cgtccctgaagttactaatcttttcaatctacc-ctgcaaatattaatcatttgacttttggtcctaattacatttg 22494004  T
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||| |||||||||| |||| | ||||||||    
T  22494005 attagtaacttcagggacgaaaattcaaataacctatattt 22494045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 26503739 - 26503636
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||| ||| |||||||||||||||   |||||||||||| ||| ||||||||||  |||| |||||||  |||||||||||| |||||||    
T  26503739 aggcttaaataggtttttcgtccctgcaaatataagtcatttgaatttt-cgtccatgaagttattaatccttccaatccgccactgcaaatattaatca 26503641  T
Q  194 tttga 198  Q
    |||||    
T  26503640 tttga 26503636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 9607687 - 9607598
Alignment:
Q  108 cttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    |||| ||||||||||||||||  |||||||||||| ||| ||||||||||| |||| ||| |||||||| |||||||| ||||||||||||    
T  9607687 ctttcgtccctgcaaatataggtcatttgaatttt-cgtccatgaagttactaatccttctaatatgcccctgcaaatattaatcatttga 9607598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 7612931 - 7612831
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    ||||||||||||||| || |||| |||||||  | ||||||||||| ||| | |||| ||||||||||||||||| ||||||||||||  ||||||||||    
T  7612931 cttaaataggtctttcgtgcctgtaaatataagctatttgaatttt-cgtccctgaaattaccaatctttccaatctgccactgcaaaatttaatcattt 7612833  T
Q  197 ga 198  Q
    ||    
T  7612832 ga 7612831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 22494264 - 22494162
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| || ||||||||||||||||||||  |||||||| ||||||| | ||||||||| |||| ||||||| |||| |||||||| | |||||    
T  22494264 aggcttaaatatgt-ttttgtccctgcaaatataggtcatttgaa-ttttcgtccttgaagttactaatccttccaatctgcccctgcaaatatcaatca 22494167  T
Q  194 tttga 198  Q
    |||||    
T  22494166 tttga 22494162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 32337951 - 32337849
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| |||| |||||||||||  |||||||||||| ||| | |||||||||  ||| |||||||||||| |||||||| |||||||    
T  32337951 aggcttaaatatgtctttcgtcc-tgcaaatataggtcatttgaatttt-cgtccctgaagttactgatccttccaatatgcccctgcaaatattaatca 32337854  T
Q  194 tttga 198  Q
    |||||    
T  32337853 tttga 32337849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 5064333 - 5064437
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| ||||||| |||||||   |||||||||||| ||| | ||||||||| |||| | ||||| |||| |||||||| ||||||    
T  5064333 taggcttaaatatgtctttcgtccctgtaaatataagtcatttgaatttt-cgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatc 5064431  T
Q  193 atttga 198  Q
    ||||||    
T  5064432 atttga 5064437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 13480594 - 13480490
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| |||| || ||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| || ||||| ||||||    
T  13480594 taggcttaaatatgtctttcgtccttgtaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctacaaatattaatc 13480496  T
Q  193 atttga 198  Q
    ||||||    
T  13480495 atttga 13480490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 16707036 - 16706933
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||| ||||||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| |||| ||||||| |||||| | |||| || ||||    
T  16707036 aggcttaattaggtctttggtccctgcaaatataggtcatttgaa-ttttcgtccttgaagttactaatcattccaatctgccacag-aaatatttatca 16706939  T
Q  194 tttgaa 199  Q
    ||||||    
T  16706938 tttgaa 16706933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 30234978 - 30234874
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| ||||||||||||||||    |||||||||| | | | ||||||||| |||| ||||||| |||| |||||||| ||||||    
T  30234978 taggcttaaatatgtctttcgtccctgcaaatataggttgtttgaatttt-catccctgaagttactaatccttccaatctgcccctgcaaatattaatc 30234880  T
Q  193 atttga 198  Q
    ||||||    
T  30234879 atttga 30234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 15819875 - 15819772
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| |||| ||||||| | ||  |||||||  ||||||    
T  15819875 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatccttccaatctacccttgcaaatactaatca 15819777  T
Q  194 tttga 198  Q
    |||||    
T  15819776 tttga 15819772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 20560927 - 20561030
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||||||||||||  |||||||| ||||||| | || |||||  |||| || |||| |||| |||||||| |||||||    
T  20560927 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccctgtagttattaatcatttcaatctgcccctgcaaatattaatca 20561025  T
Q  194 tttga 198  Q
    |||||    
T  20561026 tttga 20561030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 20995075 - 20994973
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||||||| ||| ||||||||| |   |||||||||||| | | | ||||||||| |||| ||||||| |||| |||||||| ||||||||    
T  20995075 ggcttaaataggtctttcgtctctgcaaatagaagtcatttgaatttt-catccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 20994977  T
Q  195 ttga 198  Q
    ||||    
T  20994976 ttga 20994973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 23292128 - 23292026
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| |||| |||||||||||  |||||||| ||||||| | ||||||||| |||| ||||||| |  | |||||||| ||||||||    
T  23292128 ggcttaaatatgtctttcgtccatgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatccttccaatctatccctgcaaatattaatcat 23292030  T
Q  195 ttga 198  Q
    ||||    
T  23292029 ttga 23292026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 31393561 - 31393465
Alignment:
Q  101 aataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    ||||||||||| ||||||||||| ||||   |||| |||||| | ||||||||||||| |||  |||||||||||||| |||||  ||||||||||||    
T  31393561 aataggtctttcgtccctgcaaacatagcttatttcaatttt-cattcatgaagttactaattcttccaatatgccaccgcaaaatttaatcatttga 31393465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 18865117 - 18865216
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    |||||||||||||||||||| |||||| |||||| |   |||||||| |||||||  || ||||||| |||| ||||||  ||||||||||||| |||||    
T  18865117 ttaggcttaaataggtctttagtccctacaaatacaagtcatttgaa-ttttcgtctataaagttactaatccttccaaattgccactgcaaatattaat 18865215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 20774466 - 20774363
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| ||| ||||||||||||  |||||| | |||||||   ||||||||| |||  || |||| ||||||||||||  |||||||    
T  20774466 aggcttaaataggtctttcgtctctgcaaatataggtcatttgta-ttttcgtctctgaagttactaattctttcaatctgccactgcaaaatttaatca 20774368  T
Q  194 tttga 198  Q
    |||||    
T  20774367 tttga 20774363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 31386989 - 31386942
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||    
T  31386989 ggcttaaataggtcttttgtccttgcaaatataggtcatttgaatttt 31386942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 3586210 - 3586313
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| || |||||||||||||  |||||||| |||||||   | ||||| | |||| ||| ||| ||||||||||||  ||||||    
T  3586210 taggcttaaataggtctttcgt-cctgcaaatataggtcatttgaa-ttttcgtctctaaagttgctaatccttcaaatctgccactgcaaaatttaatc 3586307  T
Q  193 atttga 198  Q
    ||||||    
T  3586308 atttga 3586313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 5064530 - 5064575
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||    
T  5064530 cttaaataggtctttcatccctgcaaatatagatcatttgaatttt 5064575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 20994819 - 20994918
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| ||||||| ||||||||  |||||||| |||||||   ||||||||| |||| ||| ||| |||| |||||||| ||||||||    
T  20994819 ggcttaaatatgtctttcgtccctgtaaatatagttcatttgaa-ttttcgtctctgaagttactaatccttctaatctgcc-ctgcaaatattaatcat 20994916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 20994886 - 20994845
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  20994886 gattagtaacttcagagacgaaaattcaaatgaactatattt 20994845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 1066457 - 1066497
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  1066457 attagtaacttcagggacgaaaattcaaatgatctatattt 1066497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 21544584 - 21544544
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  21544584 attagtaacttcagagacgaaaattcaaatgacctatattt 21544544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 26542808 - 26542741
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| ||  ||||||||||||| |||||||| ||||||| | ||||||||| ||||    
T  26542808 ggcttaaataggtctttcgtatctgcaaatatagatcatttgaa-ttttcgtccctgaagttactaatc 26542741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 3586404 - 3586451
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||||    
T  3586404 ggcttaaataggtctttcgtccctacaaatataggtcatttgaatttt 3586451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 21544518 - 21544565
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||| ||||| ||||||||||||||||  ||||||||||||    
T  21544518 ggcttaaatagatctttcgtccctgcaaatataggtcatttgaatttt 21544565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 21880364 - 21880466
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| || |||| |||||||   |||||||||||| |||   ||||||||| |||| || |||| |||| |||||||| ||||||||    
T  21880364 ggcttaaatatgtctttcgttcctgtaaatataagtcatttgaatttt-cgtctctgaagttactaatcctttcaatctgcccctgcaaatattaatcat 21880462  T
Q  195 ttga 198  Q
    ||||    
T  21880463 ttga 21880466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 23291934 - 23291868
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  23291934 gcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 23291868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 26543003 - 26542902
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||| ||||||||| ||||||||||||||||  |||||| | |||||||   ||||||||| |||  || ||||  ||||| |||||| |||||||||    
T  26543003 gcttaattaggtctttcgtccctgcaaatataggtcatttg-agttttcgtctctgaagttactaataatttcaatcggccaccgcaaatattaatcatt 26542905  T
Q  196 tga 198  Q
    |||    
T  26542904 tga 26542902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 32337754 - 32337708
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||    
T  32337754 gcttaaataggtctttcatccctgcaaatataggtcatttgaatttt 32337708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 7612737 - 7612692
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||| |||||||||||||||   ||||||||||||    
T  7612737 cttaaataggtctttcgtccctgcaaatataagtcatttgaatttt 7612692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 8427267 - 8427226
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||| ||||||||||||| |||||| ||||||||    
T  8427267 gattagtaacttgagagacgaaaattcaaatgacctatattt 8427226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 13480525 - 13480566
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  13480525 gattagtaacttcagggacgaaaattcaaatgacctatattt 13480566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 15819807 - 15819848
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  15819807 gattagtaacttcagggacgaaaattcaaatgacctatattt 15819848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 19296423 - 19296487
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||||| | ||||||||||||||||  |||||||| ||||| | ||||||||||| ||||    
T  19296423 ttaaataggtctatcgtccctgcaaatataggtcatttgaa-ttttcatccatgaagttactaatc 19296487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 21880431 - 21880390
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| ||||||  |||||||    
T  21880431 gattagtaacttcagagacgaaaattcaaatgacttatattt 21880390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 22493948 - 22493907
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  22493948 gattagtaacttcagggacgaaaattcaaatgacctatattt 22493907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 23292061 - 23292102
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  23292061 gattagtaacttcagggacgaaaattcaaatgacctatattt 23292102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 32337631 - 32337590
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| ||||| |||||||||    
T  32337631 gattagtaacttcagggacgaaaattcaaatggtctatattt 32337590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 7612614 - 7612574
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||| |||||||||| ||||| |||||||||    
T  7612614 attagtaacttcagggacgaaaattcaaatggtctatattt 7612574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 20774399 - 20774439
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||||||||||||  |||||| ||||||||    
T  20774399 attagtaacttcagagacgaaaatacaaatgacctatattt 20774439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 26542938 - 26542978
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||||||||||| | |||||| ||||||||    
T  26542938 attagtaacttcagagacgaaaactcaaatgacctatattt 26542978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 31879843 - 31879740
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||| ||||||||||| |||||| |||||||||  |||||||||||  | | | ||||||||| |||  ||||||| ||  ||||||||  |||||||    
T  31879843 aggcttcaataggtctttcgtccctacaaatataggtcatttgaatttg-catccctgaagttactaataattccaatctgttactgcaaaatttaatca 31879745  T
Q  194 tttga 198  Q
    |||||    
T  31879744 tttga 31879740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 91 - 261
Target Start/End: Complemental strand, 22309819 - 22309650
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||||||||||||||||||||  |||||||||||||||  |||||||||||| ||| | ||||||||| |||  ||||||| || |||||||||| ||||    
T  22309819 tttaggcttaaataggtctttcttccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaattgttccaatctgacactgcaaatattaa 22309721  T
Q  191 tcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||| ||||||||    
T  22309720 tcatttgaaaaatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatattt 22309650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 9694128 - 9693961
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| |||| |||||||||||  |||||||||||| ||| | ||||||||| |||| ||||| | || || ||||||| ||||||    
T  9694128 taggcttaaataggtctttcgtccatgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccattttgtcattgcaaatattaatc 9694030  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||| ||||||||    
T  9694029 atttgaaaaatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatattt 9693961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 28599425 - 28599592
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||| |||||||||||||| |||| |||||||||||| |||||||||||| ||| ||||||||||| |||| ||||| | ||||| ||||||| ||||||    
T  28599425 taggtttaaataggtctttcgtccttgcaaatatagatcatttgaatttt-cgtccatgaagttactaatccttccattttgccattgcaaatattaatc 28599523  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||| ||||||||||||| | |||||||| ||||| |||||||||| ||||| |||||||||    
T  28599524 atttgaaaaatggtcctaattacatataattagtaatttcagggacgaaaattcaaatggtctatattt 28599592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 20911129 - 20911295
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| |||||||    
T  20911129 aggcttaaataggtctttcgtccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 20911227  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | ||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  20911228 tttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 20911295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 16367346 - 16367182
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||  |||||| |||||||||||||||| ||||||||||||| ||| | ||||||||| |||| |||||||||||| |||||||| |||||||    
T  16367346 aggcttaaat--gtctttcgtccctgcaaatataggccatttgaatttt-cgtccctgaagttactaatccttccaatatgcccctgcaaatattaatca 16367250  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | ||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  16367249 tttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatattt 16367182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 121 - 261
Target Start/End: Complemental strand, 41846750 - 41846611
Alignment:
Q  121 aaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctg 220  Q
    |||||||| ||||||||||||| ||||| ||||||||| | || ||||||| ||||||||||||| |||||||||||||||||  | |||||||||||||    
T  41846750 aaatataggccatttgaatttt-cgttcctgaagttactactccttccaatctgccactgcaaatattaatcatttgaaaaatgattctaattacatctg 41846652  T
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  41846651 attagtaacttcagggacgaaaattcaaatgacctatattt 41846611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 95 - 261
Target Start/End: Original strand, 17366626 - 17366791
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||||||||||  ||| |||||||||||  |||||||||||| | | | |||| |||  |||| ||||||| ||||||||||||| ||||||||    
T  17366626 ggcttaaataggtctttcatccatgcaaatataggtcatttgaatttt-cttccctgaatttaataatccttccaatctgccactgcaaatattaatcat 17366724  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    || |||||| |||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||    
T  17366725 ttaaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatggactatattt 17366791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 1149936 - 1150102
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||| ||| ||||||||||||||||  |||||||||||| ||| | ||||||||| |||| |||||||  ||| |||||||| |||||||    
T  1149936 aggcttaaataggtatttcgtccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatcggcccctgcaaatattaatca 1150034  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | ||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  1150035 tttgacttttggtcctaattacatttgattagtaacttcagggacgaaaattcaaatgacctatattt 1150102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 9959206 - 9959044
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||| |||||| |||||||||||||| |  ||||||||||||  || ||||||||||| |||| || |||| ||||||| ||||| |||||||||||    
T  9959206 ttaaataagtctttcgtccctgcaaatattggtcatttgaattttg-gtccatgaagttactaatcctttcaatctgccactacaaatattaatcatttg 9959108  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| ||| ||||||||||||||||||||||||| |||  |||||| |||||| ||||||||    
T  9959107 aaaaatggtcataattacatctgattagtaacttcaaagataaaaattcaaatgacctatattt 9959044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 261
Target Start/End: Original strand, 17580328 - 17580493
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||||||| ||| ||| |||||||||| ||||||||||| ||| |  |||||||  |||| ||||||| |||| |||||||| ||||||||    
T  17580328 ggcttaaataggtctttcgtctctgtaaatatagactatttgaatttt-cgtccccgaagttattaatccttccaatttgcccctgcaaatattaatcat 17580426  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    |  ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  17580427 ttgacttttgatcctaattacatctgattagtaacttcagggacgaaaattcaaatgatctatattt 17580493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 261
Target Start/End: Original strand, 32519155 - 32519320
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| ||||||||||||||||  |||||||||||| ||| | |||| |||| |||| |||||||||||  |||||||| ||||||||    
T  32519155 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaatttt-cgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcat 32519253  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    | || ||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  32519254 ttgacttttggttctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 32519320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 5608978 - 5608813
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||| |||||||| || || ||||||||||| |||||||||||| |  || | ||||||| |||| || || | ||||| ||||||| ||||||||    
T  5608978 ggcttaaacaggtctttcgttccagcaaatatagatcatttgaattttcctctc-taaagttactaatcctttcattttgccattgcaaatattaatcat 5608880  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||  |||||||    
T  5608879 ttgaaaaatggtcctaattacatctgattagtaacttcataaacgaaaattaaaatgacttatattt 5608813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 22731917 - 22731751
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||| ||| | ||||||||| | || || |||| || | |||||||| |||||||    
T  22731917 aggcttaaatatgtctttcgtccctgcaaatataggccatttgaatttt-cgtccgtgaagttactattcctttcaatctgtccctgcaaatattaatca 22731819  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | ||||| ||||||||||||||||||||| || |||||||||| |||||| ||||||||    
T  22731818 tttgacttttggtccttattacatctgattagtaactttagggacgaaaattcaaatgacctatattt 22731751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 93 - 243
Target Start/End: Complemental strand, 18477262 - 18477113
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||| ||||||| || ||| |||||||||||||||  |||||| |||||| ||| ||||||||||| |||| ||||| | ||||| || | || ||||||    
T  18477262 taggtttaaatatgtatttcgtccctgcaaatataagccatttaaatttt-cgtccatgaagttactaatcattccattttgccattgaagatattaatc 18477164  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaa 243  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  18477163 atttcaaaaatggtcctaattacatctgattagtaacttcagggacgaaaa 18477113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 45663892 - 45663727
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| ||||||| |||||||| | ||||||||||| ||| | ||||||||| |||| ||| ||| || | |||||||| ||||||||    
T  45663892 ggcttaaatatgtctttcgtccctgtaaatatagtcaatttgaatttt-cgtccctgaagttactaatccttcaaatctggccctgcaaatattaatcat 45663794  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||    | |||||||||||||||||||||||||||||   ||||||||| |||||| ||||||||    
T  45663793 ttgacttttggtcctaattacatctgattagtaacttcaagaacgaaaattcaaatgacctatattt 45663727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 8089450 - 8089617
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||| |||||||||| ||| ||| |||||||||||   |||||||||||| |||   ||||||||| |||| ||||||| |||| |||||||| | ||||    
T  8089450 taggtttaaataggtttttcgtctctgcaaatatatgtcatttgaatttt-cgtctttgaagttactaatccttccaatctgcccctgcaaatatcaatc 8089548  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||    | |||||||||||||||||||||||||||||  |||||||||| ||| || ||||||||    
T  8089549 atttgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaacgacctatattt 8089617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 10446832 - 10446932
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| |||||||||||||||| ||||||||| ||||||| | ||||||||| |||| ||||||| |||| |||||||| ||||||||    
T  10446832 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaa-ttttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 10446930  T
Q  195 tt 196  Q
    ||    
T  10446931 tt 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 17580710 - 17580613
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    ||||||||||| |||||| |||||| |||||||||  |||||||||||||||| | | ||||||| |||| ||||||||||||||||||||| |||||    
T  17580710 aggcttaaatatgtctttcgtccctacaaatataggtcatttgaatttttcgtccctaaagttactaatccttccaatatgccactgcaaatattaat 17580613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 22309430 - 22309533
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| ||||||||||||||||  |||||||| |||| ||  |||||||||| |||| ||||||| |||||||||| || |||||||    
T  22309430 aggcttaaataggtctttcgtccctgcaaatataggtcatttgaa-ttttagtcaatgaagttactaatccttccaatctgccactgcacatattaatca 22309528  T
Q  194 tttga 198  Q
    |||||    
T  22309529 tttga 22309533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 37984733 - 37984864
Alignment:
Q  101 aataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaa 200  Q
    |||||| ||||| |||||||||||||| | |||||||||||| |||  || ||||||| |||  ||||| | ||||| || |||| ||||| ||||||||    
T  37984733 aatagggcttttttccctgcaaatatatatcatttgaatttt-cgtctataaagttactaattcttccattttgccattgtaaatattaattatttgaaa 37984831  T
Q  201 aattgtcctaattacatctgattagtaacttca 233  Q
    ||| |||||||||||||||||||||||| ||||    
T  37984832 aatggtcctaattacatctgattagtaatttca 37984864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 43682155 - 43682087
Alignment:
Q  182 aaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaat 250  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  43682155 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaat 43682087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 4375633 - 4375703
Alignment:
Q  180 gcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaat 250  Q
    |||||| ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| ||||    
T  4375633 gcaaatattaatcatttgaaaaatggttctaattacatctgattagtaacttcagggacgaaaattcaaat 4375703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 4375937 - 4375833
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| |||| ||||||||||   ||||| |||||| ||| ||||||||||| |||| ||||||| ||||||||||||  ||||||    
T  4375937 taggcttaaataggtctttcgtccatgcaaatatatgtcatttaaatttt-cgtccatgaagttactaatccttccaatctgccactgcaaaatttaatc 4375839  T
Q  193 atttga 198  Q
    ||||||    
T  4375838 atttga 4375833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 16366962 - 16367065
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||| ||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| |||||||    
T  16366962 aggcttaaatatgtctttcgtccctgtaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 16367060  T
Q  194 tttga 198  Q
    |||||    
T  16367061 tttga 16367065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 32519540 - 32519437
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| |||||||||||||||   |||||||||||| ||||| ||||||||| |||| || |||| |||| |||||||| |||||||    
T  32519540 aggcttaaatatgtctttcgtccctgcaaatataagtcatttgaatttt-cgttcctgaagttactaatcctttcaatctgcccctgcaaatattaatca 32519442  T
Q  194 tttga 198  Q
    |||||    
T  32519441 tttga 32519437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 41846390 - 41846494
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||| ||||| |||||| |||||||||  |||||||| ||||||| | ||||||||  |||| ||| ||| ||||||||||||| ||||||    
T  41846390 taggcttaaatagatctttcgtccctacaaatataggtcatttgaa-ttttcgtccctgaagttagtaatccttctaatctgccactgcaaatattaatc 41846488  T
Q  193 atttga 198  Q
    ||||||    
T  41846489 atttga 41846494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 18476910 - 18477009
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||||| |||| |||||||||| |||||  ||||||||||||| || | ||||||||| |||| ||||||| ||||||||||||  |||||||||||    
T  18476910 ttaaataggcctttcgtccctgcaactataggtcatttgaattttt-gtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttg 18477008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 43681855 - 43681958
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| |||||||||||||||   |||||||| ||||||| ||| ||||||| |||| ||||| | ||||| ||||||| |||||||    
T  43681855 aggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaa-ttttcgtccataaagttactaatcattccattttgccattgcaaatattaatca 43681953  T
Q  194 tttga 198  Q
    |||||    
T  43681954 tttga 43681958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 234
Target Start/End: Original strand, 17284742 - 17284873
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||| ||| ||||||||||||||||  |||||||||||| |||   ||||||||| |||| ||||| |        | |||| |||||||    
T  17284742 aggcttaaataggtttttcgtccctgcaaatataggtcatttgaatttt-cgtatctgaagttactaatccttccatt--------gaaaatattaatca 17284832  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcag 234  Q
    |||||||||| ||||||| ||||| ||||||||||||||||    
T  17284833 tttgaaaaatggtcctaactacatatgattagtaacttcag 17284873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 1150322 - 1150219
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| || |||||||||||||  |||||||| ||||||| | |||| |||| |||| || |||| |||| |||||||| |||||||    
T  1150322 aggcttaaatatgtctttcgtgcctgcaaatataggtcatttgaa-ttttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaatca 1150224  T
Q  194 tttga 198  Q
    |||||    
T  1150223 tttga 1150219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 9693742 - 9693844
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||  ||||||| ||| |||||||| |||||| |||||| |||   ||||||||| |||| ||||||| ||||||||||||  ||||||||    
T  9693742 ggcttaaatagggattttgtcgctgaaaatataggccattttaatttt-cgtcactgaagttactaatccttccaatctgccactgcaaagtttaatcat 9693840  T
Q  195 ttga 198  Q
    ||||    
T  9693841 ttga 9693844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 9958826 - 9958927
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||| |||||||  |||||||| | |||  |||||||  |||||||||||| |||||||     
T  9958826 ggcttaaataggt-tttcgtccctgcaaatatagatcatttgaa-ttttcgtcaatgaagttgctaatgcttccaatcagccactgcaaatattaatcag 9958923  T
Q  195 ttga 198  Q
    ||||    
T  9958924 ttga 9958927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 20911513 - 20911412
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| ||||||| ||||||||  ||||||||||||| || | ||||||||| |||| ||||||| || | |||||||| ||||||||    
T  20911513 ggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttt-gtccctgaagttactaatcattccaatctgtc-ctgcaaatattaatcat 20911416  T
Q  195 ttga 198  Q
    ||||    
T  20911415 ttga 20911412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 28599618 - 28599571
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  28599618 ggcttaaataggtctttcgcccctgcaaatatagaccatttgaatttt 28599571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 45663699 - 45663768
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||||| |||||| ||||||||||||||||  |||||||| ||||||||| ||||||||| ||||    
T  45663699 taggcttaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttcgttcttgaagttactaatc 45663768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 28599811 - 28599709
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||||||||||  |||||| |||||||   |||||||||||| |||   ||||||||| |||| ||||||| ||||| ||||||  ||||||||    
T  28599811 ggcttaaataggtctttcatccctgtaaatataagtcatttgaatttt-cgtctctgaagttacaaatccttccaatctgccattgcaaaatttaatcat 28599713  T
Q  195 ttga 198  Q
    ||||    
T  28599712 ttga 28599709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 17285119 - 17285019
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||| ||||| ||||||| |||| |||  |||||||| |||||||  |||||||||| |||| |||||||||| |||  ||||  ||||||||    
T  17285119 ggcttaaatagatctttcgtccctgaaaatttaggtcatttgaa-ttttcgtcaatgaagttactaatccttccaatatgtcacaacaaaatttaatcat 17285021  T
Q  195 tt 196  Q
    ||    
T  17285020 tt 17285019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 5608787 - 5608854
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| |||||||||||||||   ||||| || |||||||| |||||||||| ||||    
T  5608787 ggcttaaataggtctttcgtccctgcaaatataagtcattttaa-ttttcgtttatgaagttactaatc 5608854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 17366817 - 17366750
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||| |||||| |||| ||||||||||| ||||||||| ||||||| | ||||||||| ||||    
T  17366817 ggcttaaatatgtctttcgtccttgcaaatatagtccatttgaa-ttttcgtccctgaagttactaatc 17366750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 19606920 - 19607019
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||| |||||| ||||||| |||||||   |||||||||||| ||| | ||||||||| |||| ||||||| || |  ||||||| |||||||||||    
T  19606920 ttaaatatgtctttcgtccctgtaaatatatgtcatttgaatttt-cgtccctgaagttactaatccttccaatctgtcgttgcaaatattaatcatttg 19607018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 37985112 - 37985009
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||| ||||| || ||| |||||||||||||||   ||||||| ||||||||   |||| |||| |||| ||||||| ||||||||||||  |||||||    
T  37985112 aggctaaaataagtatttcgtccctgcaaatatatgtcatttga-tttttcgtctctgaaattactaatccttccaatttgccactgcaaaatttaatca 37985014  T
Q  194 tttga 198  Q
    |||||    
T  37985013 tttga 37985009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 41846585 - 41846652
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||| |||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  41846585 ggcttaaataagtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 41846652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 20911320 - 20911254
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||| ||||| |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  20911320 gcttaaataggacttttatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 20911254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 22309624 - 22309671
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||  ||||||||||||||||||||  ||||||||||||    
T  22309624 ggcttaaataggcattttgtccctgcaaatataggtcatttgaatttt 22309671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 22731725 - 22731772
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||||||||||  |||||||||||||||  ||||||||||||    
T  22731725 ggcttaaataggtctttcatccctgcaaatataggtcatttgaatttt 22731772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 32519345 - 32519279
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  32519345 gcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 32519279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 1150004 - 1149963
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  1150004 gattagtaacttcagggacgaaaattcaaatgacctatattt 1149963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 5608911 - 5608952
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||| ||||| ||||||| |||||||||||||||    
T  5608911 gattagtaactttagagaggaaaattcaaatgatctatattt 5608952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 9694059 - 9694100
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  9694059 gattagtaacttcagggacgaaaattcaaatgacctatattt 9694100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 16367030 - 16366989
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  16367030 gattagtaacttcagggacgaaaattcaaatgacctatattt 16366989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 17284810 - 17284769
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||| ||||||||| |||||| ||||||||    
T  17284810 gattagtaacttcagatacgaaaattcaaatgacctatattt 17284769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 17580516 - 17580452
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||  ||| |||||||||||| |||||||| ||||||| | ||||||||| ||||    
T  17580516 ttaaataggtctttcatccttgcaaatatagatcatttgaa-ttttcgtccctgaagttactaatc 17580452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 20911197 - 20911156
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  20911197 gattagtaacttcagggacgaaaattcaaatgacctatattt 20911156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 28599494 - 28599453
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||  |||||||||| |||||||||||||||    
T  28599494 gattagtaacttcatggacgaaaattcaaatgatctatattt 28599453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 9959018 - 9959066
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaattttt 143  Q
    ||||||||| ||| ||| ||||||||||||||||  |||||||||||||    
T  9959018 ggcttaaattggtttttcgtccctgcaaatataggtcatttgaattttt 9959066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 19607173 - 19607213
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||| ||| |||||||||||| |||||||||||||||    
T  19607173 attagtaatttcggagacgaaaattcaaatgatctatattt 19607213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 22309749 - 22309789
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  22309749 attagtaacttcagggacgaaaattcaaatgacctatattt 22309789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 92 - 261
Target Start/End: Original strand, 33989012 - 33989178
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    |||||||||||||||| ||| |||| |||||||||||||| |||||||||| ||| | | ||||||| |||| ||||||| ||||||||||||| |||||    
T  33989012 ttaggcttaaataggtatttcgtcc-tgcaaatatagaccttttgaatttt-cgtaccttaagttactaatccttccaatctgccactgcaaatattaat 33989109  T
Q  192 catttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
     ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  33989110 tatttgaaaaatggtcctaattacatctgattagtaacttcag-gacgaaaattcaaatgacctatattt 33989178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 33457919 - 33458081
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| |||| || |||||| || |||||||||||||   || ||||||||| |||| ||  |||||| |||||||||| |||||||||||    
T  33457919 ttaaataggtctttcgtccatgtaaatatggatcatttgaatttttgcctc-tgaagttactaatccttttaatatgtcactgcaaatattaatcatttg 33458017  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  33458018 aaaaatggttctaattacatctgattagtaactttagagacgaaaattcaaatgacctatattt 33458081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 10749316 - 10749483
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| ||||||| ||||||||  |||||||||||| ||| | ||||||||| |||| ||| ||| |  | |||||||| ||||||    
T  10749316 taggcttaaataggtctttcgtccctgtaaatataggtcatttgaatttt-cgtccctgaagttactaatccttctaatctatccctgcaaatattaatc 10749414  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||    | |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  10749415 atttgacttttggtcctaattacatctgattagtaacttcagggacgaaaatttaaatgacctatattt 10749483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 97 - 261
Target Start/End: Original strand, 30803848 - 30804011
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    ||||||||||||||| |||||| ||| |||||  |||||||||||| |||   ||||||||| |||  ||||||| || |||||||||| ||||||| ||    
T  30803848 cttaaataggtctttcgtcccttcaactataggtcatttgaatttt-cgtctctgaagttactaattcttccaatctgtcactgcaaatattaatcaatt 30803946  T
Q  197 gaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||| |||||| ||||||||    
T  30803947 gaaaaatggtcctaattacatctgattagtaacttccgggacgaaaattcaaatgacctatattt 30804011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 55036672 - 55036834
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| ||||||||||||||||  |||||||| ||||| ||| ||||||||| |||| ||||||| |||| |||||||| ||||||||||     
T  55036672 ttaaataggtctttcgtccctgcaaatataggtcatttgaa-ttttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcattta 55036770  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |    | |||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||    
T  55036771 acctttggtcctaattatatctgattagtaacttcagggacgaaaattcaaatgacctatattt 55036834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 24576291 - 24576455
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatg--ttaatcatt 195  Q
    |||||||||||||| |||||||||||||||  ||||||||||||| ||| |||||| |||| |||| ||| ||| ||| ||||||||    |||||||||    
T  24576291 ttaaataggtctttcgtccctgcaaatataagccatttgaatttt-cgtccatgaaattactaatccttctaatctgcaactgcaaaaaaattaatcatt 24576389  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||  |||||||||||||||||| |||||||||| |||||||||| |||||| ||||||||    
T  24576390 tgaaaaatgatcctaattacatctgatttgtaacttcagggacgaaaattcaaatgacctatattt 24576455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 96 - 261
Target Start/End: Complemental strand, 21255914 - 21255750
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| |||||| || |||||||||||||| |||||||||||| ||| ||| ||||||| |||  ||||| | ||||| || |||| |||||||||    
T  21255914 gcttaaataagtctttcgttcctgcaaatatagatcatttgaatttt-cgtccataaagttactaatgcttccattttgccattgtaaatattaatcatt 21255816  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||| ||||||||||||||||||||||||||||||  | ||||||| ||||||  |||||||    
T  21255815 tgaaaaatggtcctaattacatctgattagtaacttcaggaatgaaaattcaaatgacttatattt 21255750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 92 - 261
Target Start/End: Original strand, 22129003 - 22129171
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    ||||||||||||||||||||  |||| | |||||||| | ||||||||||| |||   ||||||||| |||| ||||||| |||| |||||||| |||||    
T  22129003 ttaggcttaaataggtctttcatccccgtaaatataggctatttgaatttt-cgtcactgaagttactaatccttccaatttgcccctgcaaatattaat 22129101  T
Q  192 catttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  22129102 catttgacttttcgtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 22129171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 28310734 - 28310567
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| || || ||||||||||  ||||||||| || ||  | | ||||||| |||||||||| | ||||| ||||||| ||||||    
T  28310734 taggcttaaataggtctttcgttccagcaaatataggtcatttgaatctt-cgaccctaaagttactaatctttccattttgccattgcaaatattaatc 28310636  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||| |||||||||||||||||||||| || |||| ||| |||||| ||||| |||||||||    
T  28310635 atttgaaaaatggtcctaattacatctgattagttacgtcagggacaaaaattcaaatggtctatattt 28310567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 261
Target Start/End: Original strand, 53037027 - 53037192
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| ||||||  |||||| ||||||||  |||||||||||| ||| | ||||||||| |||| ||||||||| || |||||||| ||| ||||    
T  53037027 ggcttaaataagtctttcatccctgtaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatatacccctgcaaatattagtcat 53037125  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||| |  |  || |||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  53037126 ttgacatttgatcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 53037192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 261
Target Start/End: Original strand, 40256879 - 40257039
Alignment:
Q  100 aaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaa 199  Q
    |||||||||||| |||| |||||||||||   ||||||||||| ||| | ||||||||| |||| ||||||||||||  ||||||| ||||||||||||     
T  40256879 aaataggtctttcgtccatgcaaatataggttatttgaatttt-cgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcatttgac 40256977  T
Q  200 aaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
       | ||||||||||||||||||||| ||||||||  ||||||||| |||||| ||||||||    
T  40256978 ttttggtcctaattacatctgattagcaacttcaggaacgaaaattcaaatgacctatattt 40257039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 261
Target Start/End: Original strand, 30890233 - 30890372
Alignment:
Q  121 aaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctg 220  Q
    ||||||||| ||||||||||||    || ||||||||| |||||||| | | ||||| || |||| ||||||||||||||||| ||||||||||||||||    
T  30890233 aaatatagatcatttgaattttcatctc-tgaagttactaatctttctattttgccattgtaaatattaatcatttgaaaaatggtcctaattacatctg 30890331  T
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||| |||||||||| ||||||  |||||||    
T  30890332 attagtaacttcagggacgaaaattcaaatgacttatattt 30890372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 261
Target Start/End: Complemental strand, 11313120 - 11312954
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaat 191  Q
    |||||||||||||||||||   ||| |||| |||||   |||||||||||| ||| ||||||||||| |||| ||| ||| |||| ||||||||  ||||    
T  11313120 ttaggcttaaataggtcttacatcc-tgcagatatatttcatttgaatttt-cgt-catgaagttactaatccttctaatctgcccctgcaaatactaat 11313024  T
Q  192 catttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  11313023 catttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 11312954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 30654864 - 30654702
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||| ||||||||||| ||||||||||||||||  |||||||| |||||||  ||||||||||  ||| ||| ||| ||||||||| ||| |||||||    
T  30654864 aggctttaataggtctttcgtccctgcaaatataggtcatttgaa-ttttcgtctatgaagttactgatccttctaatctgccactgc-aatattaatca 30654767  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||| || ||||||||||   |||||||||||||  |||||||||  ||||||  |||||||    
T  30654766 tttgaaaaatggttctaattacat---attagtaacttcatggacgaaaatgcaaatgacatatattt 30654702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 242
Target Start/End: Complemental strand, 38643041 - 38642898
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||| ||| ||| ||||||||||||| |||||||||||| ||||||    ||||  |||  ||||| | ||||| ||||||| |||||||    
T  38643041 aggcttaaataggtgtttcgtctctgcaaatatagatcatttgaatttt-cgttca----gttattaattcttccattttgccattgcaaatattaatca 38642947  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaa 242  Q
    |||||||||| ||||||||| |||||||||| ||||||||  |||||||    
T  38642946 tttgaaaaatagtcctaattgcatctgattaataacttcatggacgaaa 38642898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 55037057 - 55036951
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||||| ||||||| |||||| ||||||||||||||||  |||||||||||| ||||| ||||||||| |||| ||||||| |||| |||||||| ||||    
T  55037057 tttaggtttaaatatgtctttcgtccctgcaaatataggtcatttgaatttt-cgttcttgaagttactaatccttccaatctgcccctgcaaatattaa 55036959  T
Q  191 tcatttga 198  Q
    ||||||||    
T  55036958 tcatttga 55036951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 1741378 - 1741489
Alignment:
Q  86 ttatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaat 185  Q
    |||| |||||||||||||| |||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| |||| ||||||| ||||  |||||||    
T  1741378 ttatttttaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatccttccaatctgcccttgcaaat 1741476  T
Q  186 gttaatcatttga 198  Q
     ||||||||||||    
T  1741477 attaatcatttga 1741489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 261
Target Start/End: Complemental strand, 21300521 - 21300352
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||||| |||||||||||||| |||||||||||||||    ||||||||||| |||   ||||||||| |||| || || | || | ||| |||| ||||    
T  21300521 tttaggtttaaataggtctttcgtccctgcaaatatatgttatttgaatttt-cgtctctgaagttactaatcctttcagtctgtccctgtaaatattaa 21300423  T
Q  191 tcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||    | | |||||||||||||||||||||||||||| || ||||||| |||||| ||||||||    
T  21300422 tcatttgacttttggccctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatattt 21300352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 261
Target Start/End: Complemental strand, 46670618 - 46670474
Alignment:
Q  116 cctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattac 215  Q
    |||| ||||||||  |||||||||||| | | | ||||||||| |||  ||||| | || || ||||||| |||||||||| |||||| ||| |||||||    
T  46670618 cctgtaaatataggtcatttgaatttt-catccctgaagttactaattcttccattttgtcattgcaaatattaatcatttaaaaaatggtcataattac 46670520  T
Q  216 atctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||||||| || ||||||| ||||||  |||||||    
T  46670519 atctgattagtaacttcagggatgaaaattcaaatgacatatattt 46670474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 46670243 - 46670350
Alignment:
Q  90 atttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgtta 189  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||| ||| ||| | |||| |||| |||| ||||||| | ||||||||||  |||    
T  46670243 atttaggcttaaataagtcttttgtccctgcaaatataggtcatttgaa-tttccgtccttgaatttactaatccttccaatctaccactgcaaaattta 46670341  T
Q  190 atcatttga 198  Q
    |||||||||    
T  46670342 atcatttga 46670350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 33458301 - 33458200
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||||||||||||| ||||||||||||||||  |||||||| || |||| | ||||||||| |||| ||| ||| || |||||||||| |||||||||    
T  33458301 gcttaaataggtctttcgtccctgcaaatataggtcatttgaa-ttgtcgtccctgaagttactaatccttctaatctgtcactgcaaatattaatcatt 33458203  T
Q  196 tga 198  Q
    |||    
T  33458202 tga 33458200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 10749782 - 10749678
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||| |||| |||||| ||||||||||||||||  ||||| |||||| ||| | ||||||||| |||||||||||| |||| | |||||| ||||||    
T  10749782 taggcttgaatatgtctttcgtccctgcaaatataggtcatttaaatttt-cgtccctgaagttactaatctttccaatctgcctcagcaaatattaatc 10749684  T
Q  193 atttga 198  Q
    ||||||    
T  10749683 atttga 10749678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 35432405 - 35432453
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35432405 aggcttaaataggtctttcgtccctgcaaatatagaccatttgaatttt 35432453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 35432542 - 35432475
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||||| ||||    
T  35432542 ggcttaaataggtctttcgtccctgcaaatatagaccatttgaa-ttttcgcccatgaagttactaatc 35432475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 261
Target Start/End: Complemental strand, 51279541 - 51279449
Alignment:
Q  169 aatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||| ||| |||| ||||||||||||    | ||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  51279541 aatatgcccctgtaaatattaatcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 51279449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 261
Target Start/End: Original strand, 10997878 - 10998039
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| || |||||| |||||||||| ||  |||||||||||| ||| | ||||||||| |||| |||||||    | ||| |||| |||||||||    
T  10997878 gcttaaatatgtattttgttcctgcaaatacaggtcatttgaatttt-cgtccctgaagttactaatccttccaatt---ccctgtaaatattaatcatt 10997973  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||    |  ||||||||||||||||||||||||||||  |||||||||| ||||||  |||||||    
T  10997974 tgacttttgatcctaattacatctgattagtaacttcatggacgaaaattcaaatgacatatattt 10998039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 10998256 - 10998155
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| || ||| ||| ||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| |||||||||    
T  10998256 gcttaaatatgtttttcgtctctgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 10998158  T
Q  196 tga 198  Q
    |||    
T  10998157 tga 10998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 30804231 - 30804130
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| || ||| ||||||  ||||||| | |||||||||||| ||||| ||||||||| |||| ||||||| || |||||||||| |||||||||    
T  30804231 gcttaaataagtatttcgtccctttaaatatatatcatttgaatttt-cgttcctgaagttactaatccttccaatctgtcactgcaaatattaatcatt 30804133  T
Q  196 tga 198  Q
    |||    
T  30804132 tga 30804130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 1741662 - 1741606
Alignment:
Q  205 gtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| ||| ||||||||    
T  1741662 gtcctaattacatctgattagtaactccagggacgaaaatttaattgacctatattt 1741606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 11312734 - 11312837
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||  ||||||||  |||||||||||| ||| | |||||||||||||| || || | |||| |||||||| |||||||    
T  11312734 aggcttaaatatgtctttcgtccctctaaatataggtcatttgaatttt-cgtccctgaagttaccaatccttgcagtctgcccctgcaaatattaatca 11312832  T
Q  194 tttga 198  Q
    |||||    
T  11312833 tttga 11312837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 51279230 - 51279333
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||||||||||||   ||||||| ||||||| |  |||||||| |||| || |||| |||| |||||||| |||||||    
T  51279230 aggcttaaatatgtctttcgtccctgcaaatataggttatttgaa-ttttcgtcccagaagttactaatcatttcaatttgcccctgcaaatattaatca 51279328  T
Q  194 tttga 198  Q
    |||||    
T  51279329 tttga 51279333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 28310541 - 28310589
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaattttt 143  Q
    |||||||||||||||| || || ||||||||||||||||||||||||||    
T  28310541 ggcttaaataggtcttgtgaccttgcaaatatagaccatttgaattttt 28310589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 30890588 - 30890489
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| ||  ||| ||||||||  |||||||||||| | | | ||||||||| ||||||| |||| ||||||||||||  |||||||||||    
T  30890588 ttaaataggtctttcgtttctgtaaatataggtcatttgaatttt-catccctgaagttactaatcttttcaatctgccactgcaaaatttaatcatttg 30890490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 38642632 - 38642731
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||||||||| ||| |||| ||||||||||   ||||| ||||| | || | |||||||||||||| ||||||||| ||||||||||  |||||||||    
T  38642632 gcttaaataggtatttcgtccatgcaaatataagtcatttaaatttct-gtccctgaagttaccaatccttccaatataccactgcaaaatttaatcatt 38642730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 10749713 - 10749754
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  10749713 gattagtaacttcagggacgaaaatttaaatgacctatattt 10749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 30890274 - 30890233
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  30890274 gattagtaacttcagagatgaaaattcaaatgatctatattt 30890233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 35432464 - 35432516
Alignment:
Q  209 taattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||  | |||||||| ||||| |||||||||    
T  35432464 taattacatctgattagtaacttcatgggcgaaaattcaaatggtctatattt 35432516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 30804037 - 30803990
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||| ||| ||||||||||||||||  ||||||||||||    
T  30804037 ggcttaaataggtttttcgtccctgcaaatataggtcatttgaatttt 30803990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 33989204 - 33989157
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||| ||| ||||||||||||||||  ||||||||||||    
T  33989204 ggcttaaataggtttttcgtccctgcaaatataggtcatttgaatttt 33989157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 55036859 - 55036793
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  55036859 gcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 55036793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 21300327 - 21300373
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||    
T  21300327 gcttaaataggtctttcatccctgcaaatataggtcatttgaatttt 21300373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 198
Target Start/End: Original strand, 30654469 - 30654586
Alignment:
Q  80 tttttattatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccact 179  Q
    ||||| || ||||| |||||||||| ||||||  ||||||||||||||   | ||||||  |||||| | ||||||||| ||| |||||||| ||| |||    
T  30654469 ttttttttttattttggcttaaataagtctttcatccctgcaaatataagtcgtttgaa-atttcgtccttgaagttactaatatttccaatctgctact 30654567  T
Q  180 gcaaatgttaatcatttga 198  Q
    | |||| ||||| ||||||    
T  30654568 gtaaatattaataatttga 30654586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 35432690 - 35432632
Alignment:
Q  140 ttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    ||||||||||| ||||||  |||| ||||||| ||||||||||||| ||||| ||||||    
T  35432690 ttttcgttcataaagttattaatccttccaatctgccactgcaaatattaattatttga 35432632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 40257062 - 40257005
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagtt 156  Q
    ||||||||||||||  |||||||||||||||  |||||||| ||||||||| |||||||    
T  40257062 ttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgttcctgaagtt 40257005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 49648 - 49681
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatata 127  Q
    |||||||||||||| |||||||||||||||||||    
T  49648 aggcttaaataggtattttgtccctgcaaatata 49681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 1741454 - 1741413
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  1741454 gattagtaacttcagggacgaaaattcaaatgacctatattt 1741413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 10749385 - 10749344
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  10749385 gattagtaacttcagggacgaaaattcaaatgacctatattt 10749344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 10998190 - 10998231
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  10998190 gattagtaacttcagggacgaaaattcaaatgacctatattt 10998231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 30803912 - 30803875
Alignment:
Q  221 attagtaacttcagagacgaaaatttaaatgatctata 258  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  30803912 attagtaacttcagagacgaaaattcaaatgacctata 30803875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 33989401 - 33989301
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    |||||||| |||||| ||   |||||||||| | |||||||||||| ||| ||||||||||  |||| ||||||| || |||| || || ||||||||||    
T  33989401 cttaaatatgtctttcgtagatgcaaatatatatcatttgaatttt-cgtccatgaagttagtaatccttccaatttgtcactacagatattaatcattt 33989303  T
Q  197 ga 198  Q
    ||    
T  33989302 ga 33989301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 53037094 - 53037053
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  53037094 gattagtaacttcagggacgaaaattcaaatgacctatattt 53037053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 24576481 - 24576414
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||| || ||| ||||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  24576481 ggcttaaataagtttttcgtccctgcaaatataggtcatttgaa-ttttcgtccctgaagttacaaatc 24576414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 33458104 - 33458060
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||||||| |||||| |||||||||  ||||||||||||    
T  33458104 ttaaataggtctttcgtccctacaaatataggtcatttgaatttt 33458060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 33735698 - 33735532
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| |||||||    
T  33735698 aggcttaaataggtctttcgtccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 33735600  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  33735599 tttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 33735532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 7015893 - 7015728
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||||||| |||| ||||||||||   | |||||||||| ||| | ||||||||| |||| ||||||| ||||||||||||| ||||||||    
T  7015893 ggcttaaataggtctttcgtccttgcaaatataagtcgtttgaatttt-cgtccctgaagttactaatccttccaatctgccactgcaaatattaatcat 7015795  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||| ||||||||||||||||||||||||||| || || ||||||| ||||||| |||||||    
T  7015794 ttgaaaaatagtcctaattacatctgattagtaactttagggatgaaaattcaaatgatatatattt 7015728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 32052609 - 32052443
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| |||||||    
T  32052609 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 32052511  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  32052510 tttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgaactatattt 32052443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 22024255 - 22024089
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||| ||||||||||||  |||||||||||| |||   | ||||||| |||| ||||||| ||||||||||||| |||||||    
T  22024255 aggcttaaatacgtctttcgtctctgcaaatataggtcatttgaatttt-cgtcacttaagttactaatccttccaatttgccactgcaaatattaatca 22024157  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||| |||||||||||||| ||| ||||||||||  |||||||||| |||||| ||||||||    
T  22024156 tttgaaaaatggtcctaattacatcggataagtaacttcaaggacgaaaattcaaatgacctatattt 22024089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 21260857 - 21261030
Alignment:
Q  87 tatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatg 186  Q
    ||||| || |||||||||| ||||| ||||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||| | ||||| |||||||     
T  21260857 tatatatatgcttaaatagttctttcgtccctgcaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccattttgccattgcaaata 21260955  T
Q  187 ttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||  || |||||||||||||||| |||||||||  ||||||||| |||||| ||||||||    
T  21260956 ttaatcatttgaaaaatgatcataattacatctgattaataacttcaggaacgaaaattcaaatgacctatattt 21261030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 140 - 261
Target Start/End: Complemental strand, 27753819 - 27753698
Alignment:
Q  140 ttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacg 239  Q
    ||||||||  ||||||||| |||| ||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || ||||    
T  27753819 ttttcgtttctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaaaaatagtcctaattacatctgattagtaactttagggacg 27753720  T
Q  240 aaaatttaaatgatctatattt 261  Q
    |||||| |||||| ||||||||    
T  27753719 aaaattcaaatgacctatattt 27753698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 37944992 - 37945159
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| |||| || ||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| ||||||    
T  37944992 taggcttaaataggtctttcgtccttgtaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatttgcccctgcaaatattaatc 37945090  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||    | |||||||||||||||||||||||||||||  |||||||||| || ||||||||||||    
T  37945091 atttgacttttggtcctaattacatctgattagtaacttcatggacgaaaattcaattgatctatattt 37945159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 16118335 - 16118170
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||||||||||  ||||||||||||||  || |||||||||| ||| | | ||| ||| |||||||||| |  |||| ||||||| || |||||    
T  16118335 ggcttaaataggtctttcatccctgcaaatataagccgtttgaatttt-cgtccctaaagatactaatctttccatttcgccattgcaaatattcatcat 16118237  T
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||    
T  16118236 ttgaaaaatggtcctaattacatatgattagtaactttagagacgaaaattcaaatgacctatattt 16118170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 96 - 261
Target Start/End: Original strand, 25253087 - 25253251
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| ||||||  |||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| |||||||||    
T  25253087 gcttaaatatgtctttcatccctgcaaatatagttcatttgaatttt-cgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatt 25253185  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||    | |||||||||||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  25253186 tgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatattt 25253251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 96 - 261
Target Start/End: Original strand, 25316877 - 25317041
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| ||||||  |||||||||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| |||||||||    
T  25316877 gcttaaatatgtctttcatccctgcaaatatagttcatttgaatttt-cgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatt 25316975  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||    | |||||||||||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  25316976 tgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatattt 25317041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 22533771 - 22533609
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||| | ||| ||||||||||||||||  |||||||||||| ||| |  |||||||| |||| ||| |   ||||| ||||||| |||||||||||    
T  22533771 ttaaatagctttttcgtccctgcaaatataggtcatttgaatttt-cgtccccgaagttactaatccttcaatgttgccattgcaaatattaatcatttg 22533673  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||    
T  22533672 aaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctaaattt 22533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 34404482 - 34404649
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| || |||||||||||||  |||||||||||| |||   ||||||||| |||| ||||| | || || ||||||| ||||||    
T  34404482 taggcttaaataggtctttcgttcctgcaaatataggtcatttgaatttt-cgtcactgaagttactaatccttccatt-tggcattgcaaatattaatc 34404579  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaacttcagagac-gaaaatttaaatgatctatattt 261  Q
    ||||||||||| ||| |||||||||||||||||||||||||  ||| ||||||| |||||| ||||||||    
T  34404580 atttgaaaaatggtcataattacatctgattagtaacttcatggacggaaaattcaaatgacctatattt 34404649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 6422003 - 6421841
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| | |||||||||||||   |||||||||||| ||| | |||| |||| |||| || ||||||||| |||||||| |||||||||||    
T  6422003 ttaaataggtctttcgcccctgcaaatataagtcatttgaatttt-cgtccctgaaattactaatcctttcaatatgcccctgcaaatattaatcatttg 6421905  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |    | ||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  6421904 acttttggtcctaagtacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 6421841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 14745446 - 14745583
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||| ||||| | | ||||||||| |||| ||||||| |||| |||||||| ||||||    
T  14745446 taggcttaaataggtctttcgtccctgcaaatataggtcatttgaa-ttttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatc 14745544  T
Q  193 atttgaaaaattgtcctaattacatctgattagtaactt 231  Q
    ||||||    | |||||||||||||||||||||||||||    
T  14745545 atttgacttttggtcctaattacatctgattagtaactt 14745583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 7015506 - 7015610
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||| ||||| | ||||||||||| |||| ||||||| ||||||||||||| ||||||    
T  7015506 taggcttaaataggtctttcgtccctgcaaatataggccatttgaa-ttttcatccatgaagttactaatcattccaatctgccactgcaaatattaatc 7015604  T
Q  193 atttga 198  Q
    ||||||    
T  7015605 atttga 7015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 261
Target Start/End: Original strand, 18934714 - 18934878
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    ||||||||| ||||||  ||||||||||||||   |||||||||||| ||| ||||||||||| |||| || || | ||||| ||||||| ||| |||||    
T  18934714 gcttaaatatgtctttcatccctgcaaatataagtcatttgaatttt-cgtccatgaagttactaatcctttcattttgccattgcaaatattagtcatt 18934812  T
Q  196 tgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||| ||| |||||||| ||||||||||||||| | || ||||||| |||||| ||||||||    
T  18934813 tgaaaaatggtcataattacaactgattagtaacttccgggatgaaaattcaaatgacctatattt 18934878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 261
Target Start/End: Complemental strand, 41339711 - 41339573
Alignment:
Q  121 aaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctg 220  Q
    ||||||||  |||||||||||| ||| ||| ||||||| |||| ||||| | |||||  |||||| ||||||||||||||||| ||||||||||||| ||    
T  41339711 aaatataggtcatttgaatttt-cgtccataaagttactaatcattccattttgccatcgcaaatattaatcatttgaaaaatggtcctaattacat-tg 41339614  T
Q  221 attagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    | |||||||||||| |||||||||| |||||||||||||||    
T  41339613 actagtaacttcagggacgaaaattcaaatgatctatattt 41339573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 8323059 - 8323221
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||||||||||||  |||||  ||||||||  |||||||||||| ||| ||||||||||| |||| ||||| | ||||| || | || |||||||||||    
T  8323059 ttaaataggtctttcatccctataaatataggtcatttgaatttt-cgtccatgaagttactaatccttccattttgccattgaagatattaatcatttg 8323157  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||  || |||||||||||||||||||||||||| ||| |||||| |||||  ||||||||    
T  8323158 aaaaatgatcataattacatctgattagtaacttcagggacaaaaattcaaatggcctatattt 8323221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 18013666 - 18013777
Alignment:
Q  150 tgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaa 249  Q
    ||||||||| |||| |||||||||||| |||||||| ||||||||||||    | ||  |||||||||||||||||||||||||| |||||||||| |||    
T  18013666 tgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggttttaattacatctgattagtaacttcagggacgaaaattcaaa 18013765  T
Q  250 tgatctatattt 261  Q
    ||| ||||||||    
T  18013766 tgacctatattt 18013777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 33735309 - 33735415
Alignment:
Q  91 tttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaa 190  Q
    |||||||||||||| |||||| |||||| ||||||||| ||||||| ||||||||| | |||| |||| |||| ||||||| || | |||||||| ||||    
T  33735309 tttaggcttaaatatgtctttcgtccctacaaatataggccatttg-atttttcgtccctgaaattactaatccttccaatctgtccctgcaaatattaa 33735407  T
Q  191 tcatttga 198  Q
    ||||||||    
T  33735408 tcatttga 33735415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 27753480 - 27753580
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatt 195  Q
    |||||| ||||||||| ||||||||||||||||  |||| ||||||| ||| ||||||||||| |||| ||||||  ||||||||||||| |||||||||    
T  27753480 gcttaagtaggtctttcgtccctgcaaatataggtcatt-gaatttt-cgtccatgaagttactaatccttccaaactgccactgcaaatattaatcatt 27753577  T
Q  196 tga 198  Q
    |||    
T  27753578 tga 27753580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 25253472 - 25253368
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| |||| ||||||| ||||  |||||||  |||||    
T  25253472 taggcttaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatc 25253374  T
Q  193 atttga 198  Q
    ||||||    
T  25253373 atttga 25253368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 25317263 - 25317159
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| |||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| |||| ||||||| ||||  |||||||  |||||    
T  25317263 taggcttaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatc 25317165  T
Q  193 atttga 198  Q
    ||||||    
T  25317164 atttga 25317159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 6421617 - 6421724
Alignment:
Q  90 atttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgtta 189  Q
    ||||||| ||||||| |||||| |||||||||||||||   ||||||||||||| || | ||||||||| ||||||| |||| |||| || ||||| |||    
T  6421617 atttaggtttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttt-gtccttgaagttactaatcttttcaatctgcccctacaaatatta 6421715  T
Q  190 atcatttga 198  Q
    |||||||||    
T  6421716 atcatttga 6421724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 32052222 - 32052326
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||| || ||| ||||||| ||||||||  |||||||||||| ||| | ||||||||| |||| |||||||  ||| |||||||| ||||||    
T  32052222 taggcttaaatatgtttttcgtccctgtaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatccgcccctgcaaatattaatc 32052320  T
Q  193 atttga 198  Q
    ||||||    
T  32052321 atttga 32052326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 7015702 - 7015749
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||    
T  7015702 ggcttaaataggtcttttgtccctgcaaatatatatcatttgaatttt 7015749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 12991172 - 12991070
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| |||||||||||||||   |||||||| |||||||   ||||||||| |||| ||||||| | || |||||||| ||||||||    
T  12991172 ggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaa-ttttcgtctctgaagttactaatccttccaatctacccctgcaaatattaatcat 12991074  T
Q  195 ttga 198  Q
    ||||    
T  12991073 ttga 12991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 13064793 - 13064691
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||||| |||||| |||||||||||||||   |||||||| |||||||   | ||||||| |||| ||||||| |||| |||||||| ||||||||    
T  13064793 ggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaa-ttttcgtctctaaagttactaatccttccaatctgcccctgcaaatattaatcat 13064695  T
Q  195 ttga 198  Q
    ||||    
T  13064694 ttga 13064691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 22533389 - 22533490
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| | || |||||||||||  |||||||| ||||||| | ||||||||  |||| ||||||| ||||||| ||||  |||||||    
T  22533389 aggcttaaataggtctttcgcccttgcaaatataggtcatttgaa-ttttcgtccctgaagttattaatcattccaatctgccactacaaaatttaatca 22533487  T
Q  194 ttt 196  Q
    |||    
T  22533488 ttt 22533490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 18935094 - 18934996
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||| ||||||||||| ||||||||  |||||||  ||||||| | |||| |||| |||| ||| ||| ||||||||||||  |||||||||||    
T  18935094 ttaaataggttttttgtccctgtaaatataggtcatttga--ttttcgtccctgaaattactaatccttctaatttgccactgcaaaatttaatcatttg 18934997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 14745686 - 14745595
Alignment:
Q  106 gtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    |||||| |||||| ||||||||| ||||||||||||| |||   ||||||||| |||| ||||||| ||||  ||||||| ||||||||||||    
T  14745686 gtctttcgtccctacaaatataggccatttgaatttt-cgtcgctgaagttactaatccttccaatctgcccttgcaaatattaatcatttga 14745595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 18013984 - 18013894
Alignment:
Q  106 gtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttga 198  Q
    |||||| |||||||||||||||| |||||| |||||| ||| | |||||||||||||| || |||| |||| |||||||| ||||| ||||||    
T  18013984 gtctttcgtccctgcaaatataggccatttaaatttt-cgtcc-tgaagttaccaatcctttcaatctgcctctgcaaatattaattatttga 18013894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 21261054 - 21260995
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagtta 157  Q
    |||||||| |||||||||||||||||||||||  |||||||| ||||||||| ||||||||    
T  21261054 cttaaatatgtcttttgtccctgcaaatataggtcatttgaa-ttttcgttcctgaagtta 21260995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 31118954 - 31119002
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  31118954 aggcttaaatagatctttcgtccctgcaaatataggccatttgaatttt 31119002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 34404675 - 34404607
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||| |||||| |||| |||||||||||  |||||||||||| ||| ||||||||||| ||||    
T  34404675 ggcttaaataagtctttcgtccttgcaaatataggtcatttgaattttccgtccatgaagttactaatc 34404607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 37945378 - 37945276
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||||||||||||  || ||||| ||||||| | ||||||||| |||| || |||| ||||  ||||||| |||||||    
T  37945378 aggcttaaatatgtctttcgtccctgcaaatataggtca-ttgaa-ttttcgtccctgaagttactaatcctttcaatctgcccttgcaaatattaatca 37945281  T
Q  194 tttga 198  Q
    |||||    
T  37945280 tttga 37945276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 8323440 - 8323338
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||||||| | |||||||||||||  | ||||||| ||||||| | ||||||||| |||  || || | ||||| ||||||| ||||||||    
T  8323440 ggcttaaataggtctttcgcccctgcaaatatatgctatttgaa-ttttcgtccttgaagttactaattctttcattttgccattgcaaatattaatcat 8323342  T
Q  195 ttga 198  Q
    ||||    
T  8323341 ttga 8323338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 12628314 - 12628369
Alignment:
Q  195 ttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaat 250  Q
    ||||||||| || |||||||||||| |||||||||||||| |||||||||| ||||    
T  12628314 ttgaaaaatggttctaattacatcttattagtaacttcagggacgaaaattcaaat 12628369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 12990902 - 12990953
Alignment:
Q  210 aattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  12990902 aattacatctgattagtaacttcatggacgaaaattcaaatgacctatattt 12990953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 12990978 - 12990912
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||  |||||||| ||||||| ||||||||||| ||||    
T  12990978 gcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccatgaagttactaatc 12990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 13064523 - 13064574
Alignment:
Q  210 aattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  13064523 aattacatctgattagtaacttcatggacgaaaattcaaatgacctatattt 13064574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 13064599 - 13064533
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||  |||||||| ||||||| ||||||||||| ||||    
T  13064599 gcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccatgaagttactaatc 13064533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 16118144 - 16118191
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  16118144 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaatttt 16118191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 37945184 - 37945118
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||| || ||||| ||||||| ||||||||||| ||||    
T  37945184 gcttaaataggtctttcatccctgcaaatatagatcaattgaa-ttttcgtccatgaagttactaatc 37945118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 8323245 - 8323199
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaattttt 143  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  8323245 cttaaataggtctttcgtcccagcaaatataggccatttgaattttt 8323199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 16117964 - 16118028
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||||||||||||||| ||||||||  |||||||| ||||||| | ||||||||| ||||    
T  16117964 ttaaataggtcttttgtccctgtaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 16118028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 41339549 - 41339594
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||| |||||| ||||||||||||||||| ||||||||||||    
T  41339549 cttaaatatgtctttcgtccctgcaaatatagatcatttgaatttt 41339594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 22533583 - 22533650
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| |||||||||||| |||  |||||||| ||||||| | ||||||||| ||||    
T  22533583 ggcttaaataggtctttcgtccctgcaaatttaggtcatttgaa-ttttcgtccctgaagttactaatc 22533650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 25253277 - 25253210
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  25253277 ggcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccttgaagttactaatc 25253210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 147493 - 147442
Alignment:
Q  92 ttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaattttt 143  Q
    |||||||||||||| ||||| || |||||||||||||| ||||| |||||||    
T  147493 ttaggcttaaatagctctttcgttcctgcaaatatagatcatttaaattttt 147442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 22024063 - 22024110
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||| |||||||||| ||||||||||||||||  ||||||||||||    
T  22024063 ggcttatataggtctttcgtccctgcaaatataggtcatttgaatttt 22024110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 27753672 - 27753719
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttt 142  Q
    |||||||||| |||||| ||||||||||||||||  ||||||||||||    
T  27753672 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaatttt 27753719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 33735507 - 33735573
Alignment:
Q  96 gcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  33735507 gcttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 33735573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 147422 - 147464
Alignment:
Q  219 tgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||    
T  147422 tgattagtaatttcagggacaaaaatttaaatgatctatattt 147464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 12991105 - 12991146
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||||||||||||||||||||||| ||||||  |||||||    
T  12991105 gattagtaacttcagagacgaaaattcaaatgacatatattt 12991146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 16118028 - 16117987
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  16118028 gattagtaacttcagggacgaaaattcaaatgacctatattt 16117987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 21260932 - 21260891
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  21260932 gattagtaacttcagggacgaaaattcaaatgacctatattt 21260891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 25253153 - 25253112
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  25253153 gattagtaacttcagggacgaaaattcaaatgaactatattt 25253112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 25253403 - 25253444
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  25253403 gattagtaacttcagggacgaaaattcaaatgacctatattt 25253444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 25316943 - 25316902
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  25316943 gattagtaacttcagggacgaaaattcaaatgaactatattt 25316902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 25317068 - 25317000
Alignment:
Q  95 ggcttaaataggtcttt-tgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| | |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  25317068 ggcttaaataggtctttctatccctgcaaatataggtcatttgaa-ttttcgtccttgaagttactaatc 25317000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 25317194 - 25317235
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  25317194 gattagtaacttcagggacgaaaattcaaatgacctatattt 25317235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 32052291 - 32052250
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  32052291 gattagtaacttcagggacgaaaattcaaatgacctatattt 32052250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 32052541 - 32052582
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  32052541 gattagtaacttcagggacgaaaattcaaatgacctatattt 32052582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 33735630 - 33735671
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  33735630 gattagtaacttcagggacgaaaattcaaatgacctatattt 33735671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 34404551 - 34404510
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  34404551 gattagtaacttcagtgacgaaaattcaaatgacctatattt 34404510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 37945061 - 37945020
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  37945061 gattagtaacttcagggacgaaaattcaaatgacctatattt 37945020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 41339352 - 41339456
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||| |||||||  ||||| || || |||||||||   |||||||||||| ||| | ||||||| | |||||||||||| ||||||||||||  || |||    
T  41339352 taggtttaaataaatctttagttccggcaaatataagtcatttgaatttt-cgtccctgaagttgctaatctttccaatctgccactgcaaaattttatc 41339450  T
Q  193 atttga 198  Q
    ||||||    
T  41339451 atttga 41339456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 6421819 - 6421882
Alignment:
Q  99 taaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  6421819 taaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 6421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 20705096 - 20704995
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagac--catttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    |||||||| |||||| ||||||| ||||||| |   |||||||||||| |||   ||||||||| ||||||| |||| |||| |||||||| ||||||||    
T  20705096 cttaaatatgtctttcgtccctgtaaatatataggtcatttgaatttt-cgtctttgaagttactaatcttttcaatctgcc-ctgcaaatattaatcat 20704999  T
Q  195 ttga 198  Q
    ||||    
T  20704998 ttga 20704995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 10324 - 10490
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||||||| | ||||||||| |||| ||||||| |||| |||||||| |||||||    
T  10324 aggcttaaataggtctttcgtccctgcaaatatagatcatttgaa-ttttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatca 10422  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | ||||||||||||||| |||||||||| ||| |||||||||| |||||| ||||||||    
T  10423 tttgacttttggtcctaattacatcttattagtaactccagggacgaaaattcaaatgacctatattt 10490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 10392 - 10351
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  10392 gattagtaacttcagggacgaaaattcaaatgatctatattt 10351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 978 - 812
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||| |||||| ||||||| |||||| | ||||||||||||| ||| | ||||||||| |||| ||||||| |||| |||||||| |||||||    
T  978 aggcttaaatatgtctttcgtccctgtaaatattggccatttgaatttt-cgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 880  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | |||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||    
T  879 tttgacttttggtcctaattatatctgattagtaacttcagggacgaaaattcaaatgacctatattt 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 788 - 853
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  788 cttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 8435 - 8589
Alignment:
Q  97 cttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcattt 196  Q
    ||||||||||||||| ||| ||  ||||||||  |||||||||||| ||| | ||||||||| |||| ||||||| ||||||||||||| ||||||||||    
T  8435 cttaaataggtctttcgtctctttaaatataggtcatttgaatttt-cgtccctgaagttactaatccttccaatctgccactgcaaatattaatcattt 8533  T
Q  197 gaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatga 252  Q
    ||||||| ||||||||||||||||||||||||| |||| |||  ||||| ||||||    
T  8534 gaaaaatggtcctaattacatctgattagtaacatcagggacagaaattcaaatga 8589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 8500 - 8459
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  8500 gattagtaacttcagggacgaaaattcaaatgacctatattt 8459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 14238 - 14400
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| |||||||||||||||   |||||||||||| ||| | ||| ||||| |||| ||||||| ||||||||||||| ||||| |||||    
T  14238 ttaaataggtctttcgtccctgcaaatataagtcatttgaatttt-cgtccttgaggttactaatccttccaatttgccactgcaaatattaataatttg 14336  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| ||||| |||||||||||||||||||||||  || ||||||| ||||| | |||||||    
T  14337 aaaaatcgtcctgattacatctgattagtaacttcaaggatgaaaattcaaatggtatatattt 14400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 14620 - 14518
Alignment:
Q  93 taggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatc 192  Q
    |||||||||||||||| ||  |||||| ||||||||  |||||||| ||||||| | ||||||||| |||| ||| ||| |||||||| |||| ||||||    
T  14620 taggcttaaataggtccttcctccctgtaaatataggtcatttgaa-ttttcgtccttgaagttactaatccttcaaatctgccactgtaaatattaatc 14522  T
Q  193 attt 196  Q
    ||||    
T  14521 attt 14518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 72; Significance: 8e-33; HSPs: 3)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 11238 - 11076
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    ||||| |||||||| ||||||| ||||||||  |||||||||||| ||| | ||||||||  |||  ||||| | ||||| ||||||| |||||||||||    
T  11238 ttaaacaggtctttcgtccctgtaaatataggtcatttgaatttt-cgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttg 11140  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||| ||| |||||||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  11139 aaaaatggtcttaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatattt 11076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 10853 - 10955
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcat 194  Q
    ||||||||||||||||| ||||||||||||||||  |||||||| ||||||| || |||||||| |||| ||||| | ||||| ||||||| ||||||||    
T  10853 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcat 10951  T
Q  195 ttga 198  Q
    ||||    
T  10952 ttga 10955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 11050 - 11117
Alignment:
Q  95 ggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||||| ||||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  11050 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccttgaagttactaatc 11117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 10661 - 10827
Alignment:
Q  94 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatca 193  Q
    ||||||||||||||||||   |||||||||||||  ||||||||||||| ||| | |||| |||  |||| || ||||||||| |||||||| |||||||    
T  10661 aggcttaaataggtctttcacccctgcaaatataagccatttgaatttt-cgtccctgaaattattaatcctttcaatatgcccctgcaaatattaatca 10759  T
Q  194 tttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    |||||    | ||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  10760 tttgacttttggtcctaactacatctgattagtaacttcagggacgaaaattcaaatgacctatattt 10827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 11052 - 10944
Alignment:
Q  89 tatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgtt 188  Q
    |||||||||||||||| |||||| ||||||||||||||||  |||||||| ||||||| ||||||||||| ||||||| ||||  ||| || ||||| ||    
T  11052 tatttaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaa-ttttcgtccatgaagttactaatcttttcaatccgcccctacaaatatt 10954  T
Q  189 aatcatttga 198  Q
    ||||||||||    
T  10953 aatcatttga 10944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 10849 - 10786
Alignment:
Q  99 taaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    |||||||||||||  |||||||||||||||  |||||||| ||||||| | ||||||||| ||||    
T  10849 taaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccctgaagttactaatc 10786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 250
Target Start/End: Original strand, 120208 - 120353
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaaatgttaatcatttg 197  Q
    |||||||||||||| |||||||||||| |||| ||||||||||||     |||    |||| |||| ||||||||||| ||||||||| |||||||||||    
T  120208 ttaaataggtctttcgtccctgcaaatgtagatcatttgaatttt-----catcc--ttactaatccttccaatatgcaactgcaaatattaatcatttg 120300  T
Q  198 aaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaat 250  Q
    || |||  |  |||||||||||||||||||||||||  |||||||||| ||||    
T  120301 aataatgattttaattacatctgattagtaacttcatggacgaaaattcaaat 120353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 14223 - 14112
Alignment:
Q  150 tgaagttaccaatctttccaatatgccactgcaaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagagacgaaaatttaaa 249  Q
    ||||||||| |||| ||||||| |||| || ||||| ||||||||||||    | ||||||||||||| ||||| |||||||||  |||||||||| |||    
T  14223 tgaagttactaatccttccaatctgcccctacaaatattaatcatttgacttttggtcctaattacatatgatttgtaacttcatggacgaaaattcaaa 14124  T
Q  250 tgatctatattt 261  Q
    ||| ||||||||    
T  14123 tgacctatattt 14112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 14089 - 14153
Alignment:
Q  98 ttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatc 163  Q
    ||||||||||||||  |||||||||||||||  |||||||| ||||||| ||||||||||| ||||    
T  14089 ttaaataggtctttcatccctgcaaatataggtcatttgaa-ttttcgtccatgaagttacaaatc 14153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 260990 - 261104
Alignment:
Q  84 tattatatttaggcttaaataggtcttttgtccctgcaaatatagaccatttgaatttttcgttcatgaagttaccaatctttccaatatgccactgcaa 183  Q
    |||| |||||||||||||||| |  |||  ||||||||| |||||  ||||||| |||||| | |||||| |||| |||| | ||| | |||| ||||||    
T  260990 tattttatttaggcttaaatatgcatttcatccctgcaattataggtcatttga-tttttcatccatgaatttactaatcctcccattttgcccctgcaa 261088  T
Q  184 atgttaatcatttgaa 199  Q
    || |||||||||||||    
T  261089 atattaatcatttgaa 261104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 12086 - 12045
Alignment:
Q  220 gattagtaacttcagagacgaaaatttaaatgatctatattt 261  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||    
T  12086 gattactaacttcagggacaaaaatttaaatgatctatattt 12045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University