View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18234_low_32 (Length: 228)
Name: NF18234_low_32
Description: NF18234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18234_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 15323326 - 15323471
Alignment:
| Q |
65 |
ggattggacaaacttgaaaggcaaacaacc-aaggatggtactggttcaaattatgagaattctaaaccataatttaaagttaaattagacatttggtcg |
163 |
Q |
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| T |
15323326 |
ggattggacaaacttgaaaggcaaacaacctaaggatggtactggttcaaattatgagaattctaaaccataatttaaagttaaattagacatttggtcg |
15323425 |
T |
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| Q |
164 |
cttaattaatttgtgtgtttccttcataactcctaaaatcttacat |
209 |
Q |
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| T |
15323426 |
cttaattaatttgtgtgtttccttcataactcctaaaatcgtacat |
15323471 |
T |
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