View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18234_low_4 (Length: 533)

Name: NF18234_low_4
Description: NF18234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18234_low_4
NF18234_low_4
[»] chr4 (73 HSPs)
chr4 (327-516)||(50664349-50664538)
chr4 (329-516)||(2613631-2613818)
chr4 (329-516)||(16506869-16507056)
chr4 (329-516)||(16508070-16508257)
chr4 (329-516)||(50662995-50663182)
chr4 (328-516)||(55978474-55978662)
chr4 (329-516)||(56065078-56065264)
chr4 (329-516)||(2217079-2217266)
chr4 (329-516)||(2614949-2615136)
chr4 (327-516)||(56063645-56063835)
chr4 (329-516)||(677046-677233)
chr4 (329-516)||(52896307-52896493)
chr4 (329-490)||(2215785-2215946)
chr4 (329-516)||(52897641-52897826)
chr4 (329-516)||(23100938-23101126)
chr4 (329-516)||(23102229-23102417)
chr4 (357-516)||(678454-678606)
chr4 (368-490)||(37004280-37004402)
chr4 (397-516)||(3880893-3881025)
chr4 (329-448)||(621552-621671)
chr4 (322-448)||(620463-620589)
chr4 (350-447)||(31779751-31779850)
chr4 (347-448)||(27454934-27455035)
chr4 (283-328)||(47671525-47671570)
chr4 (329-385)||(3880855-3880910)
chr4 (329-372)||(26171677-26171720)
chr4 (325-362)||(13994575-13994612)
chr4 (329-385)||(13966696-13966752)
chr4 (329-385)||(36077317-36077373)
chr4 (329-417)||(37998792-37998880)
chr4 (329-417)||(50181251-50181339)
chr4 (321-372)||(6337116-6337167)
chr4 (327-362)||(23475127-23475162)
chr4 (323-362)||(30114127-30114165)
chr4 (329-372)||(30317558-30317601)
chr4 (329-372)||(30356480-30356523)
chr4 (329-372)||(34016856-34016899)
chr4 (329-372)||(36870097-36870140)
chr4 (329-372)||(40279331-40279374)
chr4 (321-372)||(41611495-41611546)
chr4 (329-372)||(48800472-48800515)
chr4 (329-372)||(56444271-56444314)
chr4 (331-385)||(6194939-6194993)
chr4 (328-362)||(33821084-33821118)
chr4 (320-394)||(42387534-42387608)
chr4 (330-372)||(56443144-56443186)
chr4 (329-419)||(56473800-56473890)
chr4 (329-362)||(1613445-1613478)
chr4 (329-418)||(19169292-19169381)
chr4 (329-362)||(20598693-20598726)
chr4 (329-362)||(22535197-22535230)
chr4 (329-362)||(22731057-22731090)
chr4 (323-372)||(23591299-23591348)
chr4 (329-362)||(32859924-32859957)
chr4 (329-358)||(34018720-34018749)
chr4 (329-362)||(37687495-37687528)
chr4 (329-362)||(37998031-37998064)
chr4 (329-362)||(42987008-42987041)
chr4 (329-362)||(44255443-44255476)
chr4 (329-362)||(45895365-45895398)
chr4 (333-418)||(46614754-46614839)
chr4 (329-418)||(47309218-47309305)
chr4 (329-362)||(48614153-48614186)
chr4 (329-422)||(49681264-49681356)
chr4 (329-362)||(50182098-50182131)
chr4 (440-489)||(51615876-51615925)
chr4 (329-366)||(55979731-55979767)
chr4 (329-418)||(56280527-56280616)
chr4 (329-361)||(1566011-1566043)
chr4 (329-385)||(1614973-1615029)
chr4 (329-372)||(6334990-6335034)
chr4 (329-372)||(6335940-6335984)
chr4 (330-362)||(34825511-34825543)
[»] chr8 (49 HSPs)
chr8 (329-516)||(11680170-11680357)
chr8 (329-516)||(35124553-35124740)
chr8 (329-516)||(11681495-11681682)
chr8 (329-516)||(35123237-35123423)
chr8 (327-516)||(767532-767721)
chr8 (329-516)||(32672291-32672477)
chr8 (329-516)||(14864972-14865158)
chr8 (329-516)||(14866035-14866222)
chr8 (327-509)||(27242926-27243107)
chr8 (327-509)||(27254501-27254682)
chr8 (329-516)||(32673602-32673790)
chr8 (347-509)||(27241619-27241780)
chr8 (347-509)||(27247492-27247653)
chr8 (332-516)||(12128007-12128191)
chr8 (329-500)||(32219538-32219709)
chr8 (330-516)||(12126735-12126920)
chr8 (329-516)||(32220728-32220913)
chr8 (329-448)||(14791470-14791589)
chr8 (329-443)||(14790672-14790786)
chr8 (325-418)||(15565624-15565717)
chr8 (329-418)||(17925259-17925348)
chr8 (329-418)||(41578097-41578186)
chr8 (328-372)||(40449825-40449869)
chr8 (329-385)||(11302366-11302422)
chr8 (329-385)||(11856012-11856068)
chr8 (322-362)||(15731350-15731390)
chr8 (329-385)||(44672041-44672097)
chr8 (329-372)||(4482367-4482410)
chr8 (319-362)||(24028211-24028254)
chr8 (329-372)||(31203870-31203913)
chr8 (327-362)||(36894605-36894640)
chr8 (327-360)||(26982-27015)
chr8 (329-362)||(356018-356051)
chr8 (329-362)||(1650349-1650382)
chr8 (329-362)||(3925870-3925903)
chr8 (329-362)||(9737210-9737243)
chr8 (329-362)||(10443058-10443091)
chr8 (328-441)||(20112299-20112412)
chr8 (329-362)||(24574055-24574088)
chr8 (329-362)||(28776000-28776033)
chr8 (329-362)||(29100624-29100657)
chr8 (329-362)||(31127739-31127772)
chr8 (329-362)||(39132733-39132766)
chr8 (329-362)||(39324460-39324493)
chr8 (330-362)||(14054061-14054093)
chr8 (328-372)||(32989132-32989176)
chr8 (329-385)||(39189081-39189137)
chr8 (317-385)||(40520143-40520211)
chr8 (328-372)||(44444808-44444851)
[»] chr3 (77 HSPs)
chr3 (329-516)||(52946366-52946553)
chr3 (329-516)||(52118191-52118378)
chr3 (329-516)||(49725914-49726101)
chr3 (329-516)||(1136240-1136427)
chr3 (329-516)||(1137536-1137723)
chr3 (329-516)||(11032387-11032574)
chr3 (329-516)||(52947715-52947901)
chr3 (323-516)||(34651309-34651502)
chr3 (329-516)||(34649875-34650062)
chr3 (329-516)||(40954645-40954832)
chr3 (329-516)||(11033690-11033877)
chr3 (329-516)||(51149966-51150150)
chr3 (351-516)||(25580806-25580970)
chr3 (320-516)||(32610810-32611006)
chr3 (329-500)||(49964678-49964850)
chr3 (329-516)||(25582348-25582535)
chr3 (397-516)||(49724665-49724784)
chr3 (397-516)||(52116949-52117067)
chr3 (329-490)||(32612295-32612454)
chr3 (329-490)||(43643740-43643901)
chr3 (328-516)||(55455881-55456068)
chr3 (329-516)||(43640786-43640974)
chr3 (347-448)||(50837478-50837578)
chr3 (329-448)||(1576486-1576605)
chr3 (329-448)||(1577527-1577645)
chr3 (329-448)||(54560833-54560952)
chr3 (345-443)||(54560049-54560147)
chr3 (351-448)||(43546388-43546485)
chr3 (328-385)||(49724625-49724682)
chr3 (347-448)||(50838275-50838376)
chr3 (328-380)||(52116909-52116961)
chr3 (326-372)||(46651222-46651268)
chr3 (329-418)||(35234839-35234928)
chr3 (323-418)||(9104000-9104094)
chr3 (329-372)||(20820307-20820350)
chr3 (329-372)||(40066635-40066678)
chr3 (329-372)||(45969318-45969361)
chr3 (346-385)||(47470740-47470779)
chr3 (329-444)||(47471496-47471611)
chr3 (319-362)||(53178656-53178699)
chr3 (329-418)||(14509172-14509261)
chr3 (329-385)||(35235974-35236031)
chr3 (320-385)||(54627014-54627079)
chr3 (329-385)||(10657196-10657252)
chr3 (326-362)||(13737806-13737842)
chr3 (329-385)||(20496125-20496181)
chr3 (329-385)||(36026969-36027025)
chr3 (329-372)||(1033884-1033927)
chr3 (329-372)||(3938313-3938356)
chr3 (329-372)||(6757006-6757049)
chr3 (329-384)||(32951048-32951103)
chr3 (327-362)||(33305150-33305185)
chr3 (397-448)||(47470762-47470813)
chr3 (324-362)||(47799832-47799870)
chr3 (329-362)||(3370850-3370883)
chr3 (328-385)||(4069794-4069851)
chr3 (329-362)||(6756720-6756753)
chr3 (329-362)||(10119902-10119935)
chr3 (329-362)||(10435413-10435446)
chr3 (329-362)||(13342440-13342473)
chr3 (329-362)||(17053158-17053191)
chr3 (329-418)||(17754861-17754950)
chr3 (329-418)||(19056181-19056270)
chr3 (329-362)||(23781820-23781853)
chr3 (329-362)||(29006553-29006586)
chr3 (329-418)||(29491998-29492087)
chr3 (329-362)||(31583439-31583472)
chr3 (329-362)||(35154735-35154768)
chr3 (329-362)||(36791817-36791850)
chr3 (329-362)||(39172578-39172611)
chr3 (329-362)||(40163038-40163071)
chr3 (329-362)||(45078302-45078335)
chr3 (329-362)||(47799021-47799054)
chr3 (329-362)||(52960943-52960976)
chr3 (329-361)||(3021061-3021093)
chr3 (329-385)||(29006932-29006988)
chr3 (329-385)||(40792405-40792461)
[»] chr1 (72 HSPs)
chr1 (322-516)||(11341962-11342156)
chr1 (322-516)||(11499981-11500175)
chr1 (329-516)||(14282780-14282967)
chr1 (329-516)||(14284121-14284308)
chr1 (329-516)||(41706932-41707119)
chr1 (319-516)||(42813723-42813920)
chr1 (329-516)||(51304737-51304924)
chr1 (329-516)||(4564079-4564265)
chr1 (329-516)||(51306219-51306407)
chr1 (327-516)||(41729783-41729972)
chr1 (329-516)||(16420118-16420304)
chr1 (328-516)||(38482395-38482581)
chr1 (329-516)||(16421987-16422178)
chr1 (329-516)||(42813230-42813416)
chr1 (329-512)||(46318760-46318942)
chr1 (329-516)||(4562756-4562943)
chr1 (329-458)||(11343340-11343469)
chr1 (329-458)||(11501360-11501489)
chr1 (352-490)||(41728825-41728963)
chr1 (401-516)||(46319072-46319187)
chr1 (396-516)||(38480987-38481105)
chr1 (322-453)||(47444981-47445112)
chr1 (329-419)||(46294437-46294527)
chr1 (329-385)||(38480950-38481005)
chr1 (326-372)||(24253171-24253217)
chr1 (319-372)||(11201888-11201941)
chr1 (327-372)||(18611147-18611192)
chr1 (321-374)||(46319184-46319237)
chr1 (329-372)||(16834365-16834408)
chr1 (329-372)||(44431180-44431223)
chr1 (329-372)||(52869658-52869701)
chr1 (325-418)||(7287537-7287629)
chr1 (329-361)||(6783128-6783160)
chr1 (328-372)||(24250407-24250451)
chr1 (322-362)||(37613676-37613716)
chr1 (329-385)||(38787532-38787588)
chr1 (329-372)||(1799818-1799861)
chr1 (330-385)||(31435558-31435613)
chr1 (329-372)||(40315640-40315683)
chr1 (329-372)||(42149206-42149249)
chr1 (329-372)||(44209101-44209144)
chr1 (333-419)||(6783888-6783973)
chr1 (478-516)||(11343303-11343341)
chr1 (478-516)||(11501323-11501361)
chr1 (328-362)||(13242193-13242227)
chr1 (328-362)||(46295581-46295615)
chr1 (332-418)||(48720770-48720856)
chr1 (319-372)||(48803990-48804044)
chr1 (329-362)||(3898505-3898538)
chr1 (329-362)||(10386836-10386869)
chr1 (329-362)||(13243058-13243091)
chr1 (329-362)||(20898514-20898547)
chr1 (329-362)||(20899359-20899392)
chr1 (329-362)||(24982645-24982678)
chr1 (329-362)||(29329290-29329323)
chr1 (329-362)||(29330135-29330168)
chr1 (329-362)||(31675384-31675417)
chr1 (329-362)||(35894065-35894098)
chr1 (329-362)||(37538532-37538565)
chr1 (329-362)||(41115351-41115384)
chr1 (329-362)||(43680364-43680397)
chr1 (329-362)||(51619409-51619442)
chr1 (328-372)||(8896919-8896963)
chr1 (322-362)||(18053683-18053723)
chr1 (329-385)||(25228228-25228284)
chr1 (329-385)||(27134257-27134313)
chr1 (328-372)||(31676476-31676520)
chr1 (329-385)||(35392478-35392534)
chr1 (332-372)||(35393231-35393271)
chr1 (329-385)||(35894888-35894944)
chr1 (328-372)||(44432331-44432374)
chr1 (336-372)||(52869915-52869951)
[»] chr5 (66 HSPs)
chr5 (324-516)||(19897387-19897579)
chr5 (329-516)||(17640353-17640540)
chr5 (329-516)||(38559571-38559758)
chr5 (329-516)||(23094666-23094853)
chr5 (329-516)||(1301227-1301412)
chr5 (329-516)||(34089878-34090064)
chr5 (319-516)||(38561070-38561265)
chr5 (329-516)||(34088576-34088761)
chr5 (325-516)||(43492696-43492887)
chr5 (329-516)||(1302717-1302902)
chr5 (329-495)||(19898754-19898920)
chr5 (324-516)||(34384969-34385162)
chr5 (329-516)||(26626497-26626685)
chr5 (323-516)||(26625036-26625227)
chr5 (329-516)||(34386387-34386573)
chr5 (329-500)||(639857-640024)
chr5 (397-516)||(23093278-23093397)
chr5 (319-415)||(17641744-17641840)
chr5 (329-489)||(19877608-19877766)
chr5 (328-451)||(43492542-43492663)
chr5 (440-511)||(17641670-17641741)
chr5 (347-448)||(36429300-36429401)
chr5 (329-385)||(23093239-23093295)
chr5 (329-448)||(5348522-5348641)
chr5 (345-443)||(5347739-5347837)
chr5 (352-445)||(33136607-33136700)
chr5 (347-448)||(36681867-36681966)
chr5 (323-372)||(11664947-11664996)
chr5 (329-385)||(41210287-41210343)
chr5 (322-385)||(13307120-13307183)
chr5 (329-372)||(41084209-41084252)
chr5 (329-418)||(1144403-1144492)
chr5 (329-385)||(4299744-4299800)
chr5 (328-372)||(5575109-5575153)
chr5 (322-362)||(16868447-16868487)
chr5 (318-362)||(26395377-26395421)
chr5 (329-372)||(4992893-4992936)
chr5 (329-372)||(9587508-9587551)
chr5 (349-444)||(31808297-31808392)
chr5 (329-372)||(32272359-32272402)
chr5 (326-385)||(36499271-36499330)
chr5 (327-362)||(39761415-39761450)
chr5 (330-372)||(3999858-3999900)
chr5 (329-362)||(459469-459502)
chr5 (319-372)||(729317-729369)
chr5 (329-362)||(970432-970465)
chr5 (329-362)||(2061428-2061461)
chr5 (329-362)||(6681336-6681369)
chr5 (329-362)||(8159935-8159968)
chr5 (329-362)||(8408229-8408262)
chr5 (329-362)||(9772231-9772264)
chr5 (329-362)||(11445905-11445938)
chr5 (329-362)||(12403559-12403592)
chr5 (329-362)||(17526056-17526089)
chr5 (329-362)||(17526902-17526935)
chr5 (329-362)||(18146514-18146547)
chr5 (319-372)||(19293267-19293320)
chr5 (329-362)||(21632500-21632533)
chr5 (329-362)||(21639911-21639944)
chr5 (329-362)||(21640747-21640780)
chr5 (329-362)||(22613643-22613676)
chr5 (329-362)||(38396220-38396253)
chr5 (329-362)||(39760569-39760602)
chr5 (329-362)||(43067515-43067548)
chr5 (328-372)||(5576346-5576390)
chr5 (324-372)||(26359924-26359971)
[»] chr7 (50 HSPs)
chr7 (329-516)||(31286793-31286980)
chr7 (329-516)||(31285469-31285657)
chr7 (329-516)||(35394639-35394826)
chr7 (329-516)||(35393163-35393350)
chr7 (329-498)||(29721028-29721194)
chr7 (329-490)||(34894195-34894356)
chr7 (329-419)||(26157272-26157362)
chr7 (352-500)||(34895456-34895603)
chr7 (351-448)||(36068123-36068220)
chr7 (352-444)||(24240589-24240681)
chr7 (329-372)||(26928071-26928114)
chr7 (326-497)||(46220680-46220848)
chr7 (329-395)||(23351660-23351725)
chr7 (324-362)||(38353965-38354003)
chr7 (321-418)||(28311475-28311571)
chr7 (329-385)||(7337163-7337219)
chr7 (329-385)||(21125694-21125750)
chr7 (329-385)||(29417151-29417207)
chr7 (326-362)||(30890209-30890245)
chr7 (330-418)||(34486877-34486964)
chr7 (329-372)||(17774288-17774331)
chr7 (323-362)||(46230272-46230311)
chr7 (347-389)||(3987311-3987353)
chr7 (328-362)||(5668342-5668376)
chr7 (324-362)||(18120244-18120282)
chr7 (330-372)||(28294240-28294282)
chr7 (411-516)||(34596473-34596579)
chr7 (328-362)||(39402781-39402815)
chr7 (327-417)||(47170182-47170272)
chr7 (329-362)||(3627936-3627969)
chr7 (329-362)||(5668245-5668278)
chr7 (329-362)||(8640898-8640931)
chr7 (329-362)||(17272628-17272661)
chr7 (328-385)||(33697388-33697445)
chr7 (329-362)||(38170901-38170934)
chr7 (329-362)||(38171740-38171773)
chr7 (329-362)||(40667924-40667957)
chr7 (329-362)||(41080262-41080295)
chr7 (329-362)||(45155757-45155790)
chr7 (328-385)||(46100124-46100181)
chr7 (329-362)||(46100971-46101004)
chr7 (329-362)||(47171034-47171067)
chr7 (329-361)||(8296258-8296290)
chr7 (329-361)||(12231007-12231039)
chr7 (330-362)||(19495934-19495966)
chr7 (329-385)||(24466299-24466355)
chr7 (329-361)||(34345220-34345252)
chr7 (329-385)||(34994734-34994790)
chr7 (330-362)||(38354815-38354847)
chr7 (329-385)||(44744261-44744316)
[»] chr6 (41 HSPs)
chr6 (329-516)||(10917859-10918046)
chr6 (329-516)||(1387519-1387706)
chr6 (329-516)||(4138843-4139029)
chr6 (329-516)||(4137656-4137842)
chr6 (329-509)||(10919206-10919386)
chr6 (329-516)||(1378455-1378641)
chr6 (329-516)||(1386203-1386389)
chr6 (329-448)||(17732015-17732134)
chr6 (329-443)||(15347432-15347546)
chr6 (382-507)||(6276028-6276158)
chr6 (346-448)||(17732832-17732934)
chr6 (329-441)||(30710302-30710413)
chr6 (345-448)||(15348213-15348315)
chr6 (326-362)||(8940211-8940247)
chr6 (329-417)||(11098928-11099016)
chr6 (329-385)||(22821131-22821187)
chr6 (345-389)||(30709507-30709551)
chr6 (323-362)||(2318533-2318572)
chr6 (449-516)||(6277150-6277217)
chr6 (323-362)||(21784352-21784391)
chr6 (327-362)||(22822251-22822286)
chr6 (329-372)||(34657803-34657846)
chr6 (330-372)||(23074300-23074342)
chr6 (326-372)||(29724170-29724216)
chr6 (329-362)||(1327306-1327339)
chr6 (329-362)||(5430634-5430667)
chr6 (348-445)||(6008660-6008757)
chr6 (329-362)||(8743142-8743175)
chr6 (332-417)||(8812858-8812943)
chr6 (329-362)||(11158107-11158140)
chr6 (329-362)||(11624629-11624662)
chr6 (329-362)||(15127768-15127801)
chr6 (329-362)||(15146622-15146655)
chr6 (329-362)||(18739379-18739412)
chr6 (329-362)||(24110272-24110305)
chr6 (329-362)||(25404075-25404108)
chr6 (329-362)||(32628728-32628761)
chr6 (322-362)||(5430183-5430223)
chr6 (319-362)||(10624445-10624489)
chr6 (329-369)||(11100041-11100080)
chr6 (329-385)||(23075379-23075435)
[»] chr2 (45 HSPs)
chr2 (323-516)||(43201347-43201539)
chr2 (329-516)||(36764753-36764940)
chr2 (329-508)||(39618028-39618207)
chr2 (329-487)||(10865184-10865340)
chr2 (329-490)||(36766056-36766217)
chr2 (329-495)||(45227217-45227380)
chr2 (338-507)||(36657566-36657735)
chr2 (329-500)||(32946649-32946819)
chr2 (380-516)||(42684140-42684276)
chr2 (329-443)||(39619273-39619388)
chr2 (329-458)||(17600695-17600822)
chr2 (353-487)||(45228746-45228879)
chr2 (382-485)||(39259195-39259296)
chr2 (319-443)||(4592617-4592741)
chr2 (413-516)||(10175569-10175672)
chr2 (329-490)||(39257430-39257581)
chr2 (329-372)||(17815462-17815505)
chr2 (323-372)||(2695916-2695965)
chr2 (329-362)||(9707867-9707900)
chr2 (329-385)||(121508-121564)
chr2 (348-448)||(4593420-4593519)
chr2 (329-385)||(15830983-15831038)
chr2 (318-362)||(19222853-19222897)
chr2 (404-444)||(39619240-39619280)
chr2 (329-372)||(5439109-5439152)
chr2 (329-372)||(9758284-9758327)
chr2 (349-440)||(22539136-22539226)
chr2 (329-372)||(28586808-28586851)
chr2 (462-516)||(39619170-39619225)
chr2 (326-361)||(43130119-43130154)
chr2 (329-418)||(17816237-17816325)
chr2 (329-418)||(18059475-18059564)
chr2 (329-362)||(22064720-22064753)
chr2 (329-418)||(28149862-28149950)
chr2 (329-418)||(28780081-28780170)
chr2 (443-516)||(32947719-32947792)
chr2 (329-362)||(36566525-36566558)
chr2 (329-362)||(40598419-40598452)
chr2 (329-362)||(41727181-41727214)
chr2 (329-362)||(42793857-42793890)
chr2 (351-444)||(45114913-45115006)
chr2 (352-448)||(10256506-10256601)
chr2 (321-385)||(15829901-15829964)
chr2 (321-372)||(28587639-28587691)
chr2 (329-381)||(41287470-41287522)
[»] scaffold0340 (1 HSPs)
scaffold0340 (329-372)||(1331-1374)
[»] scaffold0031 (2 HSPs)
scaffold0031 (329-372)||(95051-95094)
scaffold0031 (323-362)||(94240-94279)
[»] scaffold0020 (1 HSPs)
scaffold0020 (364-447)||(1984-2065)
[»] scaffold0102 (2 HSPs)
scaffold0102 (399-448)||(33160-33209)
scaffold0102 (345-389)||(32367-32411)
[»] scaffold0608 (1 HSPs)
scaffold0608 (329-417)||(1711-1799)
[»] scaffold0060 (2 HSPs)
scaffold0060 (329-385)||(7081-7137)
scaffold0060 (329-372)||(66585-66628)
[»] scaffold0006 (1 HSPs)
scaffold0006 (329-385)||(43445-43501)
[»] scaffold0572 (1 HSPs)
scaffold0572 (329-372)||(1778-1821)
[»] scaffold0498 (2 HSPs)
scaffold0498 (329-362)||(5183-5216)
scaffold0498 (326-362)||(11413-11449)
[»] scaffold0320 (2 HSPs)
scaffold0320 (329-362)||(15564-15597)
scaffold0320 (329-362)||(16315-16348)
[»] scaffold0078 (1 HSPs)
scaffold0078 (329-362)||(1836-1869)
[»] scaffold0001 (1 HSPs)
scaffold0001 (329-362)||(185597-185630)
[»] scaffold0672 (1 HSPs)
scaffold0672 (329-361)||(6386-6418)
[»] scaffold0214 (1 HSPs)
scaffold0214 (329-361)||(28742-28774)
[»] scaffold0066 (1 HSPs)
scaffold0066 (329-361)||(13619-13651)
[»] scaffold0015 (1 HSPs)
scaffold0015 (329-361)||(42580-42612)


Alignment Details
Target: chr4 (Bit Score: 174; Significance: 2e-93; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 327 - 516
Target Start/End: Complemental strand, 50664538 - 50664349
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgt 426  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50664538 tggagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgt 50664439  T
Q  427 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  50664438 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 50664349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 2613631 - 2613818
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2613631 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 2613730  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  2613731 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 2613818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 16506869 - 16507056
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16506869 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaaccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 16506968  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  16506969 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 16507056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 16508257 - 16508070
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16508257 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 16508158  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  16508157 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 16508070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 50662995 - 50663182
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50662995 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 50663094  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  50663095 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatgatcagaaaa 50663182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 328 - 516
Target Start/End: Original strand, 55978474 - 55978662
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  55978474 ggagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 55978573  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  55978574 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 55978662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 56065264 - 56065078
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  56065264 gagtaaatagtcaattaccccc-tgaaattgtaactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 56065166  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  56065165 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 56065078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 2217266 - 2217079
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| | || |||||||||||||||||||||||||| ||||||||||||||||||||    
T  2217266 gagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaacctccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 2217167  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  2217166 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 2217079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 2615136 - 2614949
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||  | | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  2615136 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaaacacatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 2615037  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  2615036 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 2614949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 327 - 516
Target Start/End: Original strand, 56063645 - 56063835
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaa-cccacctgaaattgtcaagcg 425  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  56063645 tggagtaaatagtcaattacccccctgaaattgtaactttcatcaaaaacccccctgaattttgcaaaatgtcaaaaaacccccctgaaattgtcaagcg 56063744  T
Q  426 tctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  56063745 tctgtcaattacccccctccgttaattttctccatccaacatgctgatgtagccgttaactgccacgtggcactgacacatggtcagaaaa 56063835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 677046 - 677233
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||||||   ||||||||||||||||||    
T  677046 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaccctcctgaattttgcaaaatgtaaaaaacccctatgaaattgtcaagcgtct 677145  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  677146 gtcaattaccccccttcgttaatttcctccatccaacatgctgatgtggcggttaactgccacgtggcactgacacatggtcaaaaaa 677233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 52896307 - 52896493
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||||   ||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||| | ||||||||||||||||||    
T  52896307 gagtaaatagtcaattaccctt-tgaaattgtaactttcgtcaaaaacccctctgaattttgtaaaatgtcaaaaaccctcttgaaattgtcaagcgtct 52896405  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  52896406 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 52896493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 329 - 490
Target Start/End: Original strand, 2215785 - 2215946
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| || | |||||||||||||||||||||||||| |||||||||| |||||||||    
T  2215785 gagtaaatagtcaattacccccctaaaattgtaactttcgtcaaaaaccctcatgaattttgcaaaatgtcaaaaacccccctgaaattgccaagcgtct 2215884  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcca 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2215885 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcca 2215946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 52897826 - 52897641
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||||||||  |  ||||||||||||||||||     
T  52897826 gagtaaatagtcaattacccc--tgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaaaacctctgaaattgtcaagcgtcg 52897729  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||||    
T  52897728 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactaccacgtggcactaacacatggtcaaaaaa 52897641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 23100938 - 23101126
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||| |||||||||||||||||||  ||||| |||| ||| ||||||||||||||||    
T  23100938 gagtaaatagtcaattacccccctaaaattgtacctttcgtcaaaaacccccctgaattttgcaaaacttcaaatacccccctaaaattgtcaagcgtct 23101037  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| |||||||    
T  23101038 gtcaattacccccctccgttaatatcctccatccaacatgctgatgtggccgttaactgcccacgtggcactgccacatggccagaaaa 23101126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 23102417 - 23102229
Alignment:
Q  329 gagtaaatagtcaattacccccc-tgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||| |||||||||||||||||||  ||||| |||| ||||||||||||||||||     
T  23102417 gagtaaatagtcaattaccccccctgaaattgtagctttcgtcaaaaacccccctgaattttgcaaaacttcaaatacccccctgaaattgtcaagcgtt 23102318  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| |||||||    
T  23102317 tgtcaattac-cccctccgttaatatcttccatccaacatgctgatgtggccgttaactgcccacgtggcactgccacatggccagaaaa 23102229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 357 - 516
Target Start/End: Complemental strand, 678606 - 678454
Alignment:
Q  357 ttgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaatttcct 456  Q
    |||||||||| |||||||| ||  |||||||||||||||  ||||||| || ||||      ||||||||||||||||||||||| ||||||||||||||    
T  678606 ttgtaactttcgtcaaaaacccttctgaattttgcaaaagatcaaaaaaccccctg------tcaagcgtctgtcaattaccccc-tccgttaatttcct 678514  T
Q  457 ccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  678513 ccatccaacatgttgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 678454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 368 - 490
Target Start/End: Complemental strand, 37004402 - 37004280
Alignment:
Q  368 gtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacat 467  Q
    ||||||||||| |||||||||| ||||| ||||||||||   ||||||||||| |||||||||||||| ||| |||| ||||||||||| ||||||||||    
T  37004402 gtcaaaaatcctcctgaattttacaaaacgtcaaaaacctctctgaaattgtctagcgtctgtcaattgccctcctctgttaatttcctacatccaacat 37004303  T
Q  468 gctgatgtggccgttaactgcca 490  Q
    ||||||||| |||||||||||||    
T  37004302 gctgatgtgtccgttaactgcca 37004280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 397 - 516
Target Start/End: Original strand, 3880893 - 3881025
Alignment:
Q  397 gtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctcc-------------gttaatttcctccatccaacatgctgatgtggccgtta 483  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| ||             ||||||||||||||||||||||||||||||||||||||    
T  3880893 gtcaaaaacccccctgaaattgtcaagcgtcggtcaattaccccccccccccccccccgtgcgttaatttcctccatccaacatgctgatgtggccgtta 3880992  T
Q  484 actgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||| |||||||| ||||||||||| ||||    
T  3880993 actgccacgtggcactaacacatggtcaaaaaa 3881025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 448
Target Start/End: Complemental strand, 621671 - 621552
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||| |||  ||||||||||||||||| |||| |||||||| |||||||| ||||   |||  |||||||||| |||||||||| ||| |||      
T  621671 gagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaacccccctgaaattgacaaacgtta 621572  T
Q  429 gtcaattacccccctccgtt 448  Q
    ||||||||||||||||||||    
T  621571 gtcaattacccccctccgtt 621552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 322 - 448
Target Start/End: Original strand, 620463 - 620589
Alignment:
Q  322 aaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtca 421  Q
    |||||| |||||||||| |||  ||||| |||||||||||  ||| ||||||||||||||||| ||||   |||  |||||||||| |||||||||| ||    
T  620463 aaaaatcgagtaaataggcaaaaacccctctgaaattgtagttttcgtcaaaaatccccctgatttttaggaaacttcaaaaacccccctgaaattgaca 620562  T
Q  422 agcgtctgtcaattacccccctccgtt 448  Q
    | |||  ||||||||||||||||||||    
T  620563 aacgttagtcaattacccccctccgtt 620589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 31779751 - 31779850
Alignment:
Q  350 cctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaaccca--cctgaaattgtcaagcgtctgtcaattacccccctccgt 447  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||   |  ||||||||||| || |||  |||||||| ||||||||||    
T  31779751 cctgaaattgtaacttttgtcaaaaatcctcctgatttttgcaaaatttcaaaaaaaaaaccctgaaattgttaaacgttagtcaattatccccctccgt 31779850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 448
Target Start/End: Original strand, 27454934 - 27455035
Alignment:
Q  347 ccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccg 446  Q
    |||||||||||||||||||| |||||||| |||||||| ||||   |||  | ||||||||   ||||||| |||| |||| ||||||||||||||||||    
T  27454934 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttgaaaaacccctttgaaattatcaaacgtcagtcaattacccccctccg 27455033  T
Q  447 tt 448  Q
    ||    
T  27455034 tt 27455035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 47671570 - 47671525
Alignment:
Q  283 tttaaaaatgcatctgaaaatatattaatttagtccaataaaaatg 328  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  47671570 tttaaaaatgcatctgaaaatatattaatttagtcaaataaaaatg 47671525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 3880855 - 3880910
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  3880855 gagtaaatagtcaattacccc-ctgaaattgtaactttcgtcaaaaacccccctgaa 3880910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 26171677 - 26171720
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  26171677 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 26171720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 13994612 - 13994575
Alignment:
Q  325 aatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||||| |||||||||||||||||    
T  13994612 aatggagtaaatagtcaatttcccccctgaaattgtaa 13994575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 13966696 - 13966752
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||  |||||||||||    
T  13966696 gagtaaataggcaattacccccttgaaattgtaagtttcgtcaattatccccctgaa 13966752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 36077373 - 36077317
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||  | |||||||||    
T  36077373 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacccccctgaa 36077317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 417
Target Start/End: Complemental strand, 37998880 - 37998792
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaatt 417  Q
    ||||||||||||||||  |||||||||||||||| |||  ||||  ||||||||||| ||  |||||| ||||  |||| |||||||||    
T  37998880 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaattatccccctgaaattaacaaaatttcaattacccccctgaaatt 37998792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 417
Target Start/End: Original strand, 50181251 - 50181339
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaatt 417  Q
    ||||||||||||||||  |||||||||||||||| |||  ||||  ||||||||||| ||  |||||| ||||  |||| |||||||||    
T  50181251 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaattatccccctgaaattaacaaaatttcaattacccccctgaaatt 50181339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 372
Target Start/End: Complemental strand, 6337167 - 6337116
Alignment:
Q  321 taaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||| ||||||| |||||||||| ||||||||||||||| ||| |||||    
T  6337167 taaaaatagagtaaagagtcaattactcccctgaaattgtaagtttcgtcaa 6337116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 23475127 - 23475162
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||| |||||||||||||||||    
T  23475127 tggagtaaatagtcaatttcccccctgaaattgtaa 23475162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 30114165 - 30114127
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  30114165 aaaatggagtaaatagtcaatt-cccccctgaaattgtaa 30114127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 30317558 - 30317601
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||    
T  30317558 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 30317601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 30356480 - 30356523
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  30356480 gagtaaatagtcaatttcccccctgaaattgtaaattttatcaa 30356523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 34016856 - 34016899
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||    
T  34016856 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 34016899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 36870097 - 36870140
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||    
T  36870097 gagtaaatagacaattacccccctgaaattgtaagtttcgtcaa 36870140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 40279374 - 40279331
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||    
T  40279374 gagtaaatagtcaatttcccccttgaaattgtaagttttgtcaa 40279331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 372
Target Start/End: Complemental strand, 41611546 - 41611495
Alignment:
Q  321 taaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| |||||    
T  41611546 taaaaattgagtaaatagacaattatccccctgaaattgtaagtttcgtcaa 41611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 48800515 - 48800472
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||    
T  48800515 gagtaaatagtcaattaccctcctgaaattgtaagtttcgtcaa 48800472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 56444314 - 56444271
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||    
T  56444314 gagtaaatagtcaattaccctcctgaaattgtaagttttatcaa 56444271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 6194993 - 6194939
Alignment:
Q  331 gtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||| ||||||||||||||||||||||| ||| |||||  | |||||||||    
T  6194993 gtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaa 6194939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 362
Target Start/End: Original strand, 33821084 - 33821118
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||| |||||||||||||||||    
T  33821084 ggagtaaatagtcaatttcccccctgaaattgtaa 33821118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 394
Target Start/End: Original strand, 42387534 - 42387608
Alignment:
Q  320 ataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaa 394  Q
    ||||| ||||||||||||||||||||| |  ||||||||| ||| ||||| |||||  |||||||| ||| ||||    
T  42387534 ataaacatggagtaaatagtcaattacacatctgaaattgcaacgtttgttaaaaactcccctgaaattttcaaa 42387608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 56443144 - 56443186
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||||  ||||||||||| |||||||||    
T  56443144 agtaaatagtcaattacccctttgaaattgtaagttttgtcaa 56443186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 56473890 - 56473800
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgt 419  Q
    |||||||||| || ||||| |||||||||||||| |||||||||  | ||||||||| ||  |||||| ||||  || | |||||||||||    
T  56473890 gagtaaataggcatttacctccctgaaattgtaagttttgtcaattacccccctgaaattaacaaaatttcaattactcccctgaaattgt 56473800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 1613445 - 1613478
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||||| |||||||||||||    
T  1613445 gagtaaatagtcaattaccctcctgaaattgtaa 1613478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 19169292 - 19169381
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||||||||| ||||||||||||||||  ||| |||||  | ||||||||| ||  |||||  ||||  |||| ||||||||||    
T  19169292 gagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattaccctcctgaaattg 19169381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 20598693 - 20598726
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  20598693 gagtaaatagtcaatttcccccctgaaattgtaa 20598726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 22535197 - 22535230
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  22535197 gagtaaatagtcaatttcccccctgaaattgtaa 22535230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 22731057 - 22731090
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  22731057 gagtaaatagtcaatttcccccctgaaattgtaa 22731090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 23591348 - 23591299
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||| |||||||||| ||||||||||||| ||||||||| ||| |||||    
T  23591348 aaaattgagtaaataggcaattacccccctaaaattgtaagtttcgtcaa 23591299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 32859924 - 32859957
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  32859924 gagtaaatagtcaatttcccccctgaaattgtaa 32859957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 34018749 - 34018720
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaatt 358  Q
    ||||||||||||||||||||||||||||||    
T  34018749 gagtaaatagtcaattacccccctgaaatt 34018720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 37687495 - 37687528
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||| |||||||||||||||||||||||    
T  37687495 gagtaaataggcaattacccccctgaaattgtaa 37687528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 37998031 - 37998064
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  37998031 gagtaaatagtcaatttcccccctgaaattgtaa 37998064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 42987008 - 42987041
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  42987008 gagtaaatagtcaatttcccccctgaaattgtaa 42987041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 44255476 - 44255443
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  44255476 gagtaaatagtcaatttcccccctgaaattgtaa 44255443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 45895365 - 45895398
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  45895365 gagtaaatagtcaatttcccccctgaaattgtaa 45895398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 418
Target Start/End: Complemental strand, 46614839 - 46614754
Alignment:
Q  333 aaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||| ||||| ||||||||||||||||| |||||||||  | ||||||||| ||  |||||  ||||  |||| ||||||||||    
T  46614839 aaataggcaatttcccccctgaaattgtaagttttgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattg 46614754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Complemental strand, 47309305 - 47309218
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||  || ||||| || ||  |||||||||||  |||| ||||||||||    
T  47309305 gagtaaatagtcaattac-cccctgaaattgtaagtttcgtcaattat-cccctaaaattaacaaaatgtcaattacccccctgaaattg 47309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 48614186 - 48614153
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  48614186 gagtaaatagtcaatttcccccctgaaattgtaa 48614153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 422
Target Start/End: Original strand, 49681264 - 49681356
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaa 422  Q
    |||||||||| |||  || ||||| |||||||| |||||||||||||  ||||||| ||||  ||||  ||||||||||  |||||||||||||    
T  49681264 gagtaaataggcaaaaactcccct-aaattgtagcttttgtcaaaaactcccctgatttttagaaaacttcaaaaacccctctgaaattgtcaa 49681356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 50182131 - 50182098
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  50182131 gagtaaatagtcaatttcccccctgaaattgtaa 50182098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 489
Target Start/End: Original strand, 51615876 - 51615925
Alignment:
Q  440 ccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 489  Q
    |||| ||||| |||||||||||||||||| ||| ||| ||||||||||||    
T  51615876 cccttcgttagtttcctccatccaacatgatgacgtgaccgttaactgcc 51615925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 55979767 - 55979731
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttt 366  Q
    |||||||||||||||||| |||||||||||||||||||    
T  55979767 gagtaaatagtcaattac-cccctgaaattgtaacttt 55979731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Complemental strand, 56280616 - 56280527
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    ||||||||||||||||||||| |||||| ||||| ||| |||||  |||||| | || ||  |||||||||||  | || ||||||||||    
T  56280616 gagtaaatagtcaattacccctctgaaactgtaagtttcgtcaattatccccttaaaattaacaaaatgtcaattatccccctgaaattg 56280527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 1566043 - 1566011
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgta 361  Q
    |||||||||||||||| ||||||||||||||||    
T  1566043 gagtaaatagtcaatttcccccctgaaattgta 1566011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 1615029 - 1614973
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||  | |||||||||    
T  1615029 gagtaaatagtcaattacccccataaaattgtaagtttcgtcaattacccccctgaa 1614973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 6334990 - 6335034
Alignment:
Q  329 gagtaaatagtcaattaccccc-ctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||    
T  6334990 gagtaaatagtcaattaccccctctgaaattgtaagtttcgtcaa 6335034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 6335940 - 6335984
Alignment:
Q  329 gagtaaatagtcaattaccccc-ctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||    
T  6335940 gagtaaatagtcaattaccccctctgaaattgtaagtttcgtcaa 6335984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 34825543 - 34825511
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||| |||||||||||||||||    
T  34825543 agtaaatagtcaatttcccccctgaaattgtaa 34825511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 8e-90; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 11680170 - 11680357
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11680170 gagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11680269  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  11680270 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 11680357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 35124740 - 35124553
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  35124740 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaatccccctgaaattgtcaagcgtct 35124641  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  35124640 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 35124553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 11681682 - 11681495
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  11681682 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaacccccctgaaattgttaagcgtct 11681583  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  11681582 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 11681495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 35123237 - 35123423
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35123237 gagtaaatagtcaattacccc-ctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 35123335  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  35123336 gtcaattatccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 35123423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 327 - 516
Target Start/End: Complemental strand, 767721 - 767532
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgt 426  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  767721 tggagtaaatagtcaattactcccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgt 767622  T
Q  427 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  767621 ctgtcaattacccccctccgttaatttcctcaatccaacatgctgatgtggtcgttaactgccacgtggcactgacacatggtcaaaaaa 767532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 32672291 - 32672477
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32672291 gagtaaatagtcaattacccc-ctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 32672389  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  32672390 gtcaattacccccctccgttaatttcatccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 32672477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 14864972 - 14865158
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  14864972 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcgtct 14865071  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  14865072 gtcaatta-ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcgctgacacatggtcaaaaaa 14865158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 14866222 - 14866035
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaac-ccacctgaaattgtcaagcgtc 427  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  14866222 gagtaaatagtcaattacccccctgaaattgtaactttcttcaaaaatccccctgaattttgcaaaatgtcaaaaactccctctgaaattgtcaagcgtc 14866123  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  14866122 tgtcaatta-ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcgctgacacatggtcaaaaaa 14866035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 327 - 509
Target Start/End: Complemental strand, 27243107 - 27242926
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgt 426  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  27243107 tggagtaaatagtcaattacccccctgaaattataactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaactcccctgaaattgtcaagcgt 27243008  T
Q  427 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggt 509  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27243007 ccgtcaattac-cccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggt 27242926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 327 - 509
Target Start/End: Complemental strand, 27254682 - 27254501
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgt 426  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  27254682 tggagtaaatagtcaattacccccctgaaattataactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaactcccctgaaattgtcaagcgt 27254583  T
Q  427 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggt 509  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27254582 ccgtcaattac-cccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggt 27254501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 32673790 - 32673602
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||| |||||| ||| ||||||||||||| |||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  32673790 gagtaaatagtcatttaccctcctcaaattgtaactttcgtcaaaaatttccctgaattttgcaaaatatcaaaaacccccctgaaattgtcaagcgtct 32673691  T
Q  429 gtcaattacccccc-tccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  32673690 gtcaattaccccccttccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 32673602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 347 - 509
Target Start/End: Original strand, 27241619 - 27241780
Alignment:
Q  347 ccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccg 446  Q
    |||||| ||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||  |||| |||||||||||||||||||||| |||| ||||    
T  27241619 ccccctaaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaatccctctgatattgtcaagcgtctgtcaattatcccc-tccg 27241717  T
Q  447 ttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggt 509  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27241718 ttaattttctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggt 27241780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 347 - 509
Target Start/End: Original strand, 27247492 - 27247653
Alignment:
Q  347 ccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccg 446  Q
    |||||| ||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||  |||| |||||||||||||||||||||| |||| ||||    
T  27247492 ccccctaaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaatccctctgatattgtcaagcgtctgtcaattatcccc-tccg 27247590  T
Q  447 ttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggt 509  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27247591 ttaattttctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggt 27247653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 332 - 516
Target Start/End: Complemental strand, 12128191 - 12128007
Alignment:
Q  332 taaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtc 431  Q
    ||||||||||||||||||| || |||||||||||| ||||||||| | ||||||||||||||||  ||||| || | | |||||||||||||||||||||    
T  12128191 taaatagtcaattaccccc-tggaattgtaactttcgtcaaaaattctcctgaattttgcaaaacttcaaatactcccttgaaattgtcaagcgtctgtc 12128093  T
Q  432 aattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| |||||||    
T  12128092 aattacccccctccgttaatatcttccatccaacatgctgatgtggccgttaactgcccacgtggcactgccacatggccagaaaa 12128007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 329 - 500
Target Start/End: Original strand, 32219538 - 32219709
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||| |||| ||||||||||||  ||||| |||| ||||||||||||||||||||    
T  32219538 gagtaaatagtcaattacccccttgaaattgtaattttcgtcaaaaatctccctaaattttgcaaaacttcaaatacccccctgaaattgtcaagcgtct 32219637  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccatgtggcactg 500  Q
    |||||||| |||||| ||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32219638 gtcaatta-cccccttcgttagtatcctccatccaacatgctgatgtggccgttaactgtccatgtggcactg 32219709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 330 - 516
Target Start/End: Original strand, 12126735 - 12126920
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctg 429  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||     |||||||||||||||  ||||| |||| ||||||||||| |||||||||    
T  12126735 agtaaatagtcaattacccct-tgaaattgtagctttcgtcaaaaaaatttctgaattttgcaaaacttcaaatacccccctgaaattgttaagcgtctg 12126833  T
Q  430 tcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||| |||| ||||||||| |||||||||||||||| |||||||||||||||||| ||| ||||||||| ||||||| |||||||    
T  12126834 tcaatta-ccccttccgttaatatcctccatccaacatgttgatgtggccgttaactgcccacgtggcactgccacatggccagaaaa 12126920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 32220913 - 32220728
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||| |||| | ||||||||  ||| |||||||| ||| || ||||||||||||  ||||| |||| | | ||||||||||||||||    
T  32220913 gagtaaatagtcaattatcccc-taaaattgtagttttcgtcaaaaa-ccctctaaattttgcaaaacttcaaatacccccttaaaattgtcaagcgtct 32220816  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||| || |||||| || ||||||||||||| |||||||||||||||||| ||| ||||||||| ||||||| |||||||    
T  32220815 gtcaattaccccc-tcggttaatatcatccatccaacatgttgatgtggccgttaactgcccacgtggcactgccacatggccagaaaa 32220728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 448
Target Start/End: Complemental strand, 14791589 - 14791470
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||| |||  ||||||||||||||||| |||| |||||||| |||||||| ||||   |||  ||||||| || |||||||||| ||| |||      
T  14791589 gagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgtta 14791490  T
Q  429 gtcaattacccccctccgtt 448  Q
    ||||||||||||||||||||    
T  14791489 gtcaattacccccctccgtt 14791470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 443
Target Start/End: Original strand, 14790672 - 14790786
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||| |||  | |||||||||||||||||||| |||||||| |||||||| ||||   |||  |||||||||| ||||||||| |||| |||      
T  14790672 gagtaaataggcaaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 14790771  T
Q  429 gtcaattacccccct 443  Q
    |||||||||||||||    
T  14790772 gtcaattacccccct 14790786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 15565717 - 15565624
Alignment:
Q  325 aatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||  | ||||||||| ||  |||||  ||||  |||| ||||||||||    
T  15565717 aatggagtaaatagtcaattacccccttgaaattgtaagttttgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattg 15565624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 418
Target Start/End: Complemental strand, 17925348 - 17925259
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||  | |||||| || ||  |||||||||||  |||| ||||||||||    
T  17925348 gagtaaatagtgaattacccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattacccccctgaaattg 17925259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 418
Target Start/End: Complemental strand, 41578186 - 41578097
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||  ||||||||||| ||  |||||  ||||  |||| ||||||||||    
T  41578186 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattatccccctgaaattaacaaaacttcaattacccccctgaaattg 41578097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 40449825 - 40449869
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||    
T  40449825 ggagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 40449869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 11302366 - 11302422
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||  |||||||||||    
T  11302366 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatccccctgaa 11302422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 11856012 - 11856068
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||  |||||||||||    
T  11856012 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatccccctgaa 11856068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 15731350 - 15731390
Alignment:
Q  322 aaaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  15731350 aaaaatagagtaaatagtcaatttcccccctgaaattgtaa 15731390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 44672097 - 44672041
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||  | |||||||||    
T  44672097 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacccccctgaa 44672041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 4482367 - 4482410
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||    
T  4482367 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 4482410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 24028211 - 24028254
Alignment:
Q  319 aataaaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  24028211 aataaaaagggaataaataggcaattacccccctgaaattgtaa 24028254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 31203870 - 31203913
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||    
T  31203870 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 31203913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Complemental strand, 36894640 - 36894605
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||| |||||||||||||||||    
T  36894640 tggagtaaatagtcaatttcccccctgaaattgtaa 36894605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 27015 - 26982
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgt 360  Q
    |||||||||||||||||||| |||||||||||||    
T  27015 tggagtaaatagtcaattactcccctgaaattgt 26982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 356051 - 356018
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  356051 gagtaaatagtcaatttcccccctgaaattgtaa 356018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 1650349 - 1650382
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  1650349 gagtaaatagtcaatttcccccctgaaattgtaa 1650382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 3925870 - 3925903
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  3925870 gagtaaatagtcaatttcccccctgaaattgtaa 3925903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 9737243 - 9737210
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||| ||||||||||||||||    
T  9737243 gagtaaatagtcaattaaccccctgaaattgtaa 9737210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 10443058 - 10443091
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  10443058 gagtaaatagtcaatttcccccctgaaattgtaa 10443091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 441
Target Start/End: Complemental strand, 20112412 - 20112299
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    ||||| ||||| |||  ||||| |||||||||||||||| || |||||  ||||||| ||||   |||  ||||||||||  |||||||| |||| |||     
T  20112412 ggagtgaataggcaaaaacccctctgaaattgtaactttcgtaaaaaaaacccctgatttttaagaaacttcaaaaaccccactgaaattatcaaacgtt 20112313  T
Q  428 tgtcaattaccccc 441  Q
     |||||||||||||    
T  20112312 agtcaattaccccc 20112299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 24574088 - 24574055
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  24574088 gagtaaatagtcaatttcccccctgaaattgtaa 24574055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 28776000 - 28776033
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  28776000 gagtaaatagtcaatttcccccctgaaattgtaa 28776033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 29100624 - 29100657
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  29100624 gagtaaatagtcaatttcccccctgaaattgtaa 29100657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 31127772 - 31127739
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  31127772 gagtaaatagtcaatttcccccctgaaattgtaa 31127739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 39132733 - 39132766
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||| |||||||||||||||||||||||    
T  39132733 gagtaaataggcaattacccccctgaaattgtaa 39132766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 39324460 - 39324493
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  39324460 gagtaaatagtcaatttcccccctgaaattgtaa 39324493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 14054093 - 14054061
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||| |||||||||||||||||    
T  14054093 agtaaatagtcaatttcccccctgaaattgtaa 14054061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 32989132 - 32989176
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||| |||| |||||||||||| |||| ||||    
T  32989132 ggagtaaatagtcaatttcccctctgaaattgtaagttttatcaa 32989176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 39189137 - 39189081
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||| ||||||||| |||  ||||  |||||||||||    
T  39189137 gagtaaatagtcaatttcccccctaaaattgtaagtttcatcaattatccccctgaa 39189081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 40520143 - 40520211
Alignment:
Q  317 ccaataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||| |||||| ||||||||| |||||| || |||||||||||||| |||  ||||  |||||||||||    
T  40520143 ccaaaaaaaatagagtaaataatcaatttcctccctgaaattgtaagtttcatcaattatccccctgaa 40520211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 44444808 - 44444851
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||    
T  44444808 ggagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaa 44444851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 8e-90; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 52946366 - 52946553
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  52946366 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 52946465  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  52946466 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 52946553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 52118378 - 52118191
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  52118378 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 52118279  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  52118278 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 52118191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 49726101 - 49725914
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  49726101 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaatccccctgaaattgtcaagcgtct 49726002  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  49726001 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 49725914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 1136240 - 1136427
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  1136240 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcacgcgtct 1136339  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  1136340 gtcaattaccctcctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacatggcactgacacatggtcaaaaaa 1136427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 1137723 - 1137536
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  1137723 gagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaccccccctgaaattgtcaagcgtct 1137624  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  1137623 gtcaattacccccctccgttaatttcctccatccaacatgctaatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 1137536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 11032387 - 11032574
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  11032387 gagtaaatagtcaattacccccctgaaattttaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11032486  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  11032487 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaacagccacgtggcactgacacatggtcaaaaaa 11032574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 52947901 - 52947715
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  52947901 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccctctgaattttacaaaatgtcaaaaaccc-cctgaaattgtcaagcgtct 52947803  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  52947802 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 52947715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 323 - 516
Target Start/End: Complemental strand, 34651502 - 34651309
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaa 422  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  34651502 aaaatagagtaaatagtcaattacctccctgaaattgtaacttttatcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaa 34651403  T
Q  423 gcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |  |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34651402 gtttctgtcaattacccccctccgttaattttcttcatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 34651309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 34649875 - 34650062
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||  ||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  34649875 gagtaaatagtcaattacccccttgaaattgtaactttcgtaaaaaactcccctgaattttgcaaaatgtcaaaaatctccctgaaattgtcaagcgtct 34649974  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34649975 gtcaattatccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 34650062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 40954645 - 40954832
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaat-ccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40954645 gagtaaatagtcaattatcccc-tgaaattgtaacttttgtcaaaaaaaccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 40954743  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  40954744 tgtcaattacccccctccgttaatttccaccatccaacatgctgatgtggccgttaactgccacgtggcactggcacatggtcaaaaaa 40954832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 11033877 - 11033690
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||| |||||||||||||  | ||||||||||||||||||||    
T  11033877 gagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaaatcccctgaattttgtaaaatgtcaaaaaaacccctgaaattgtcaagcgtct 11033778  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  11033777 gtcaattacccccctccgttaatttcctccatccaacttgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 11033690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 51149966 - 51150150
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||    
T  51149966 gagtaaatagtcaattacccc-ctgaaattgtaactttcgtcaaaaacccctctgaattttgcaaaatgtcaaaaacccctctgaaattgtcaagcgtct 51150064  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  51150065 gtcaattaccccc--tcgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 51150150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 351 - 516
Target Start/End: Original strand, 25580806 - 25580970
Alignment:
Q  351 ctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaa 450  Q
    |||||||||||||||| |||||||||  || |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  25580806 ctgaaattgtaactttcgtcaaaaatttccttgaattttgcaaaacgtcaaaacccc-cctgaaattgtcaagcgtctgtcaattacccccctccgttaa 25580904  T
Q  451 tttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25580905 tttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 25580970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 320 - 516
Target Start/End: Original strand, 32610810 - 32611006
Alignment:
Q  320 ataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgt 419  Q
    |||||| | |||||||||||||| |||| |||| ||||||||| ||| |||||||| | ||||||||||||||||| ||||||||| | | ||||||| |    
T  32610810 ataaaattagagtaaatagtcaactacctccctaaaattgtaattttcgtcaaaaacctccctgaattttgcaaaacgtcaaaaactcccatgaaatttt 32610909  T
Q  420 caagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  32610910 caagcgtctgtcaattaccctcctccgttaatttcctccatccaacaagctgatgtggtcgttaactgccacgtggcactgccacatggtcagaaaa 32611006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 329 - 500
Target Start/End: Original strand, 49964678 - 49964850
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||| |||  || ||||||||||||||||    
T  49964678 gagtaaatagtcaattatccccctgaaattgtaactttcgttaaaaaaccccctgaattttgcaaaacgtcaaaaccccctctaaaattgtcaagcgtct 49964777  T
Q  429 gtcaattac-ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactg 500  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49964778 gtcaattactccccctctgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactg 49964850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 25582535 - 25582348
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccc-cctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    ||||||||| |||||||||||||| | |||||||||||  |||||||     |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  25582535 gagtaaataatcaattacccccctaatattgtaactttcttcaaaaaaaaaacctgaattttgcaaaacgtcaaaaacccccctgaaattgtcaagcgtc 25582436  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  25582435 tgtcaattaccccc-tccattaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactggcacatggtcagaaaa 25582348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 397 - 516
Target Start/End: Original strand, 49724665 - 49724784
Alignment:
Q  397 gtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggc 496  Q
    |||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49724665 gtcaaaaaccccactgaaattgtcaagcgtctgtcaattatccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggc 49724764  T
Q  497 actgacacatggtcagaaaa 516  Q
    ||||||||||||||| ||||    
T  49724765 actgacacatggtcaaaaaa 49724784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 397 - 516
Target Start/End: Original strand, 52116949 - 52117067
Alignment:
Q  397 gtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggc 496  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  52116949 gtcaaaaaccc-cctaaaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggc 52117047  T
Q  497 actgacacatggtcagaaaa 516  Q
    ||||||||||||||| ||||    
T  52117048 actgacacatggtcaaaaaa 52117067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 329 - 490
Target Start/End: Complemental strand, 32612454 - 32612295
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||  | ||||||||||||||||  ||||||||||  || ||| ||||||||||||    
T  32612454 gagtaaatagtcaattaccccc-tgaaattgtaacttttgtaaaaaaaactcctgaattttgcaaaacatcaaaaacccctcttaaagtgtcaagcgtct 32612356  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcca 490  Q
    | |||||| | |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  32612355 gccaatta-ctccctccattaatttcttccatccaacatgctgatgtggccgttaactgcca 32612295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 329 - 490
Target Start/End: Complemental strand, 43643901 - 43643740
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||  |||||||||    |||||||||||| | |      
T  43643901 gagtaaataatcaattacccctctgaaattgtagcttttgtcaaaaatcctcctgaattttgcaaaacttcaaaaacctctttgaaattgtcaaacatta 43643802  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcca 490  Q
    ||||| |||| || ||||||||||||||||||||||||||||||  |||| |||||||||||    
T  43643801 gtcaaatacctccatccgttaatttcctccatccaacatgctgacatggctgttaactgcca 43643740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 328 - 516
Target Start/End: Original strand, 55455881 - 55456068
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    |||||||||||||||||||||||||||||||||| |||| | |||||   ||| ||||||||||||||  |||||||||| |||||||||||||   |||    
T  55455881 ggagtaaatagtcaattacccccctgaaattgtagctttcgccaaaatctcccttgaattttgcaaaacttcaaaaaccc-cctgaaattgtcataagtc 55455979  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
      |||| ||||| |||||||||||||||||||||||||| |||||  || | ||||||||||| ||||||||| |||||| ||| ||||    
T  55455980 aatcaaataccctcctccgttaatttcctccatccaacacgctgacatgactgttaactgccacgtggcactgccacatgatcaaaaaa 55456068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 43640786 - 43640974
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||||| || |||||||| |||| ||||||||  ||||||||||||||||||  |||||||    |||||||||||||| ||||     
T  43640786 gagtaaatagtcaattaccccactaaaattgtagctttcgtcaaaaaaacccctgaattttgcaaaacttcaaaaagaaccctgaaattgtcaaacgtca 43640885  T
Q  429 gtc-aattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||| ||| ||| |||||||||||||||||||||||||||||||||  | || |||||| |||| ||||||||  |||||| ||| ||||    
T  43640886 gtcaaataacctccctccgttaatttcctccatccaacatgctgacattgctgttaacagccacgtggcactaccacatgatcaaaaaa 43640974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 347 - 448
Target Start/End: Original strand, 50837478 - 50837578
Alignment:
Q  347 ccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccg 446  Q
    |||||||||||||||||||| |||||||| |||||||| ||||  ||||| |||||||||| |||||||||| ||| |||  ||||||||||||||||||    
T  50837478 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttagaaaatttcaaaaaccc-cctgaaattgacaaacgttagtcaattacccccctccg 50837576  T
Q  447 tt 448  Q
    ||    
T  50837577 tt 50837578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 448
Target Start/End: Original strand, 1576486 - 1576605
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||| |||  ||||||||||||||||| |||| |||||||| |||||||| ||||   |||  |||||||||| |||||||||| ||| |||      
T  1576486 gagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaacccccctgaaattgacaaacgtta 1576585  T
Q  429 gtcaattacccccctccgtt 448  Q
    ||||||||||||||||||||    
T  1576586 gtcaattacccccctccgtt 1576605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 448
Target Start/End: Complemental strand, 1577645 - 1577527
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||  ||||||||||||||||| |||| |||||||| |||||||| ||||   |||  |||||||||| |||||||||| ||| |||      
T  1577645 gagtaaatagtcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaccc-cctgaaattgacaaacgtta 1577547  T
Q  429 gtcaattacccccctccgtt 448  Q
    ||||||||||||||||||||    
T  1577546 gtcaattacccccctccgtt 1577527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 448
Target Start/End: Complemental strand, 54560952 - 54560833
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||| |||  ||||||||||||||||| |||| |||||||| |||||||| ||||   |||  ||||||| || |||||||||| ||| |||      
T  54560952 gagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgtta 54560853  T
Q  429 gtcaattacccccctccgtt 448  Q
    ||||||||||||||||||||    
T  54560852 gtcaattacccccctccgtt 54560833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 443
Target Start/End: Original strand, 54560049 - 54560147
Alignment:
Q  345 acccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccct 443  Q
    |||||||||||||||||||||| |||||||| |||||||| ||||   |||  |||||||||| | ||||||| |||| |||  |||||||||||||||    
T  54560049 acccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccatgaaattatcaaacgttagtcaattacccccct 54560147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 448
Target Start/End: Original strand, 43546388 - 43546485
Alignment:
Q  351 ctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgtt 448  Q
    |||||||||||||||| ||||||||||  ||||| ||||   |||  ||||||||||  |||||||| |||| |||| ||||||||||||||||||||    
T  43546388 ctgaaattgtaactttcgtcaaaaatcttcctgatttttaagaaacttcaaaaacccctctgaaattatcaaacgtcagtcaattacccccctccgtt 43546485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 49724625 - 49724682
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||    
T  49724625 ggagtaaatagtcaattacccccctgaaattgtaattttcgtcaaaaaccccactgaa 49724682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 448
Target Start/End: Complemental strand, 50838376 - 50838275
Alignment:
Q  347 ccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccg 446  Q
    |||||||||||||||||||| |||||||| |||||| | ||||   |||  |||||||| | ||||||||| |||| |||  ||||||||||||||||||    
T  50838376 ccccctgaaattgtaactttcgtcaaaaacccccctaatttttaagaaacttcaaaaactcccctgaaattatcaaacgttagtcaattacccccctccg 50838277  T
Q  447 tt 448  Q
    ||    
T  50838276 tt 50838275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 380
Target Start/End: Original strand, 52116909 - 52116961
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatcccc 380  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  52116909 ggagtaaattgtcaattacccccctgaaattgtaactttcgtcaaaaaccccc 52116961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 46651268 - 46651222
Alignment:
Q  326 atggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  46651268 atggagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 46651222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 35234839 - 35234928
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||||||||||||||||||||||||||| ||| |||||  | ||||||||| ||  |||||  ||||  |||| ||||||||||    
T  35234839 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattg 35234928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 418
Target Start/End: Complemental strand, 9104094 - 9104000
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||| |||||  | |||||| || ||  |||||||||||  |||| ||||||||||    
T  9104094 aaaattgagtaaatagtcaattaccccc-tgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattacccccctgaaattg 9104000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 20820350 - 20820307
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  20820350 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 20820307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 40066678 - 40066635
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  40066678 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 40066635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 45969318 - 45969361
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||||||||||||||| |||||||||    
T  45969318 gagtaaatagtcaatttcccccctgaaattgtaagttttgtcaa 45969361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 47470740 - 47470779
Alignment:
Q  346 cccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  47470740 cccccctgaaattgtaactttcgtcaaaaatccccctgaa 47470779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 444
Target Start/End: Complemental strand, 47471611 - 47471496
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||| |||  | |||| |||||||||| |||| |||||||  |||||||| ||||   |||  |||||||||| |||||||||| ||| |||      
T  47471611 gagtaaataggcaaaaaaccccttgaaattgtagctttcgtcaaaaccccccctgatttttaggaaacttcaaaaacccccctgaaattgccaaacgtta 47471512  T
Q  429 gtcaattacccccctc 444  Q
    ||||||||||||||||    
T  47471511 gtcaattacccccctc 47471496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 53178699 - 53178656
Alignment:
Q  319 aataaaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  53178699 aataaaaatcgagtaaatagtcaatttcccccctgaaattgtaa 53178656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 14509172 - 14509261
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||  | |||| | |||||  |||||||||||  |||  ||||||||||    
T  14509172 gagtaaatagtcaattacccccccgaaattgtaagtttcgtcaactacccccttaaatttaacaaaatgtcaattaccaccctgaaattg 14509261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 35236031 - 35235974
Alignment:
Q  329 gagtaaatagtcaattacccccc-tgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  | |||||||||    
T  35236031 gagtaaatagtcaattaccccccttgaaattgtaagttttgtcaattacccccctgaa 35235974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 320 - 385
Target Start/End: Original strand, 54627014 - 54627079
Alignment:
Q  320 ataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||| | ||||||||||||||||||||| |||||||||||| ||| |||||  | |||||||||    
T  54627014 ataaaatttgagtaaatagtcaattacccctctgaaattgtaagtttcgtcaattacccccctgaa 54627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 10657252 - 10657196
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||  | |||||||||    
T  10657252 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacccccctgaa 10657196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 13737842 - 13737806
Alignment:
Q  326 atggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||||| |||||||||||||||||    
T  13737842 atggagtaaatagtcaatttcccccctgaaattgtaa 13737806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 20496181 - 20496125
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||  | |||||||||    
T  20496181 gagtaaatagtcaatttcccccctgaaattgtaagttttatcaattacccccctgaa 20496125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 36026969 - 36027025
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||  | |||||||||    
T  36026969 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaa 36027025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 1033927 - 1033884
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||    
T  1033927 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 1033884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 3938356 - 3938313
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||    
T  3938356 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 3938313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 6757049 - 6757006
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||    
T  6757049 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 6757006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 384
Target Start/End: Complemental strand, 32951103 - 32951048
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctga 384  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||  ||||||||||    
T  32951103 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatccccctga 32951048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 33305150 - 33305185
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||| |||||||||||||||||    
T  33305150 tggagtaaatagtcaatttcccccctgaaattgtaa 33305185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 47470762 - 47470813
Alignment:
Q  397 gtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgtt 448  Q
    |||||||| || ||||||||| |||| |||| ||||||||||||||||||||    
T  47470762 gtcaaaaatccccctgaaattatcaaacgtcagtcaattacccccctccgtt 47470813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 47799870 - 47799832
Alignment:
Q  324 aaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  47799870 aaatggagtaaatagtcaatttctcccctgaaattgtaa 47799832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 3370883 - 3370850
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  3370883 gagtaaatagtcaatttcccccctgaaattgtaa 3370850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 4069794 - 4069851
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||||||||||| ||||| ||||||||||| ||| |||||  | |||||||||    
T  4069794 ggagtaaatagtcaatttcccccatgaaattgtaagtttcgtcaattacccccctgaa 4069851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 6756753 - 6756720
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||| |||||||||||||||||||||||    
T  6756753 gagtaaataggcaattacccccctgaaattgtaa 6756720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 10119902 - 10119935
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  10119902 gagtaaatagtcaatttcccccctgaaattgtaa 10119935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 10435413 - 10435446
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  10435413 gagtaaatagtcaatttcccccctgaaattgtaa 10435446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 13342473 - 13342440
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  13342473 gagtaaatagtcaatttcccccctgaaattgtaa 13342440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 17053158 - 17053191
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  17053158 gagtaaatagtcaatttcccccctgaaattgtaa 17053191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Complemental strand, 17754950 - 17754861
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    ||||||||||||||||  |||| ||||||||||| ||| |||||  ||||||||||| ||  |||||  ||||  |||| ||||||||||    
T  17754950 gagtaaatagtcaattttccccatgaaattgtaagtttcgtcaattatccccctgaaattaacaaaaattcaattacccccctgaaattg 17754861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Complemental strand, 19056270 - 19056181
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    ||||||||||||||||  |||| ||||||||||| ||| |||||  ||||||||||| ||  |||||  ||||  |||| ||||||||||    
T  19056270 gagtaaatagtcaattttccccatgaaattgtaagtttcgtcaattatccccctgaaattaacaaaaattcaattacccccctgaaattg 19056181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 23781853 - 23781820
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  23781853 gagtaaatagtcaatttcccccctgaaattgtaa 23781820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 29006553 - 29006586
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  29006553 gagtaaatagtcaatttcccccctgaaattgtaa 29006586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 29491998 - 29492087
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||||||||| ||||||||||||||||  ||| |||||  | ||||||||| ||  |||||  ||||  |||| ||||||||||    
T  29491998 gagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattg 29492087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 31583472 - 31583439
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  31583472 gagtaaatagtcaatttcccccctgaaattgtaa 31583439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 35154768 - 35154735
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  35154768 gagtaaatagtcaatttcccccctgaaattgtaa 35154735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 36791850 - 36791817
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  36791850 gagtaaatagtcaatttcccccctgaaattgtaa 36791817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 39172611 - 39172578
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  39172611 gagtaaatagtcaatttcccccctgaaattgtaa 39172578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 40163038 - 40163071
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  40163038 gagtaaatagtcaatttcccccctgaaattgtaa 40163071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 45078302 - 45078335
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  45078302 gagtaaatagtcaatttcccccctgaaattgtaa 45078335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 47799021 - 47799054
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  47799021 gagtaaatagtcaatttcccccctgaaattgtaa 47799054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 52960943 - 52960976
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  52960943 gagtaaatagtcaatttcccccctgaaattgtaa 52960976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 3021061 - 3021093
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgta 361  Q
    |||||||||||||||| ||||||||||||||||    
T  3021061 gagtaaatagtcaatttcccccctgaaattgta 3021093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 29006988 - 29006932
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||| ||||||||||| |||  ||||  |||||||||||    
T  29006988 gagtaaatagtcaatttcccccttgaaattgtaagtttcatcaattatccccctgaa 29006932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 40792461 - 40792405
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||  |||||| ||||    
T  40792461 gagtaaataggcaattacccccttgaaattgtaagtttcgtcaattatccccttgaa 40792405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 3e-89; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 322 - 516
Target Start/End: Original strand, 11341962 - 11342156
Alignment:
Q  322 aaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtca 421  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11341962 aaaaaaggagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtca 11342061  T
Q  422 agcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  11342062 agcgtctgtcaattacccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 11342156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 322 - 516
Target Start/End: Original strand, 11499981 - 11500175
Alignment:
Q  322 aaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtca 421  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11499981 aaaaaaggagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtca 11500080  T
Q  422 agcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  11500081 agcgtctgtcaattacccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 11500175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 14282780 - 14282967
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14282780 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgatattgtcaagcgtct 14282879  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  14282880 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 14282967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 14284308 - 14284121
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  14284308 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgttaaaaacccccctgaaattgtcaagcgtct 14284209  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  14284208 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 14284121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 41707119 - 41706932
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  41707119 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaaaacccctgaattttgcaaaacgtcaaaaacccccctgaaattgtcaagcgtct 41707020  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41707019 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 41706932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 319 - 516
Target Start/End: Complemental strand, 42813920 - 42813723
Alignment:
Q  319 aataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    ||||||||||    
T  42813920 aataaatatagagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaaaaaccctgaaattg 42813821  T
Q  419 tcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42813820 tcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 42813723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 51304737 - 51304924
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccct-gaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  51304737 gagtaaatagtcaattaccccc-tgaaattgtaactttcatcaaaaatcccccttgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 51304835  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  51304836 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggctgttaactgccatgtggcactgacacatggtcagaaaa 51304924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 4564265 - 4564079
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4564265 gagtaaatagtcaattacccct-tgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 4564167  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  4564166 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtgacactgacacatggtcagaaaa 4564079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 51306407 - 51306219
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatc-cccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  51306407 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaaaaacccctgaattatgcgaaatgtcaaaaacccccctgaaattgtcaagcgtc 51306308  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  51306307 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtaagaaaa 51306219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 327 - 516
Target Start/End: Complemental strand, 41729972 - 41729783
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgt 426  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  41729972 tggagtaaatagtcaattacacccctgaaattgtaattttcgtcaaaaacccccctaaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgt 41729873  T
Q  427 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||    
T  41729872 ctgtcaattatccccctccgttaatttcctccatccaacatgccgatgtggccgttaactgccacgtggcactggcacatggtcagaaaa 41729783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 16420118 - 16420304
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  16420118 gagtaaatagtcaattacccc-ctgaaattgtaactttcgttaaaaatccccctgaattttgcaaaatatcaaaaacccccctgaaattgtaaagcgtct 16420216  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||    
T  16420217 atcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcattggcacatggtcagaaaa 16420304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 328 - 516
Target Start/End: Complemental strand, 38482581 - 38482395
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  38482581 ggagtaaatagtcaattaccccc-tgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgttaaaaaccccctggaaattgtcaagcgtc 38482483  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  38482482 tgtcaattaccccc-tccgttaatttcctccatccaacatgctgatgtggctgttaactgccacgtggcactgacacatggtcagaaaa 38482395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 16422178 - 16421987
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaa----atccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagc 424  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||      ||||||||||| || |||||||||||||| | ||||||||||||||||    
T  16422178 gagtaaatagtcaattacccccctgaagttgtaactttcgtcaaaaccccccccccctgaattatgaaaaatgtcaaaaactcccctgaaattgtcaagc 16422079  T
Q  425 gtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  16422078 gtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggttagaaaa 16421987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 42813230 - 42813416
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||| |||| |||||||||||||||  ||||||| ||||||||||||||| ||||||||||||| | |||||||||| ||||||||     
T  42813230 gagtaaatagtcaattatcccc-tgaaattgtaactttcatcaaaaacccccctgaattttgccaaatgtcaaaaactcccctgaaattgccaagcgtcg 42813328  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  42813329 gtcaattacccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgccacgtggcactgacaaatggtcagaaaa 42813416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 329 - 512
Target Start/End: Original strand, 46318760 - 46318942
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  46318760 gagtaaatagtcaattacccccataaaattgtaactttcgtcaaaaccccccctgaattttgcaaaatgtaaaaaacccccctgaaatggtcaagcgtct 46318859  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcag 512  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  46318860 gtcaatta-cctcctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcgctgacacatggtcag 46318942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 4562756 - 4562943
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||| |||||||||||  | ||||||||| ||| || |||||  ||  ||||||||||||||||||||||| ||  |||||||||||||||||||    
T  4562756 gagtaaataatcaattacccctttaaaattgtaattttcgttaaaaactcctttgaattttgcaaaatgtcaaaaaaccctctgaaattgtcaagcgtct 4562855  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||    
T  4562856 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgacacgtggcactgacacatggtcaaaaaa 4562943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 329 - 458
Target Start/End: Complemental strand, 11343469 - 11343340
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11343469 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11343370  T
Q  429 gtcaattacccccctccgttaatttcctcc 458  Q
    ||||||||||||||||||||||||||||||    
T  11343369 gtcaattacccccctccgttaatttcctcc 11343340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 329 - 458
Target Start/End: Complemental strand, 11501489 - 11501360
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11501489 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11501390  T
Q  429 gtcaattacccccctccgttaatttcctcc 458  Q
    ||||||||||||||||||||||||||||||    
T  11501389 gtcaattacccccctccgttaatttcctcc 11501360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 352 - 490
Target Start/End: Original strand, 41728825 - 41728963
Alignment:
Q  352 tgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaat 451  Q
    |||||||||||||||| ||||||| |||| | |||||||||||| |||||| ||||   |||||||||||||| | ||||||||||||||||||||||||    
T  41728825 tgaaattgtaacttttttcaaaaacccccttaaattttgcaaaacgtcaaagacccctttgaaattgtcaagcatttgtcaattacccccctccgttaat 41728924  T
Q  452 ttcctccatccaacatgctgatgtggccgttaactgcca 490  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41728925 ttcctccatccaacatgctgatgtggccgttaactgcca 41728963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 401 - 516
Target Start/End: Complemental strand, 46319187 - 46319072
Alignment:
Q  401 aaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactg 500  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  46319187 aaaacccccctgaaattgtcaagcgtctgtcaattaccccccttcgttaacttcctccatccaacatgctgatgtggccgttaactgccacgtggctctg 46319088  T
Q  501 acacatggtcagaaaa 516  Q
    ||||||||||| ||||    
T  46319087 acacatggtcaaaaaa 46319072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 396 - 516
Target Start/End: Original strand, 38480987 - 38481105
Alignment:
Q  396 tgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtgg 495  Q
    |||||||||  | |||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  38480987 tgtcaaaaattcccctgaaattgtcaagcgt-tgtcaattatcctc-tccgttaatttcctccatccaacatgttgatgtggccgttaactgccacgtgg 38481084  T
Q  496 cactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||    
T  38481085 cactgacacatggtcagaaaa 38481105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 322 - 453
Target Start/End: Original strand, 47444981 - 47445112
Alignment:
Q  322 aaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtca 421  Q
    ||||| ||||||||||| |||  | ||||||||||||||| |||| |||||||  |||||||| |||    |||  |||||||||| | |||||||||||    
T  47444981 aaaaaaggagtaaatagccaaaaaaccccctgaaattgtagctttcgtcaaaaccccccctgattttcaggaaacttcaaaaacccccatgaaattgtca 47445080  T
Q  422 agcgtctgtcaattacccccctccgttaattt 453  Q
    | |||  |||||||||||||||||||| ||||    
T  47445081 aacgttagtcaattacccccctccgtttattt 47445112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 46294437 - 46294527
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgt 419  Q
    |||||||||||||||||||||||||||||||||| ||| |||||  | |||||| || ||  |||||||||||  |||| |||||||||||    
T  46294437 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattacccccctgaaattgt 46294527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 38480950 - 38481005
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  38480950 gagtaaatagtcaattatcccc-tgaaattgtaacttttgtcaaaaattcccctgaa 38481005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 24253217 - 24253171
Alignment:
Q  326 atggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  24253217 atggagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 24253171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 11201888 - 11201941
Alignment:
Q  319 aataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||  ||||||||||||||||||||||||||||||||| ||| |||||    
T  11201888 aataaaaatatagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 11201941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 18611147 - 18611192
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  18611147 tggagtaaatagtcaattatccccctgaaattgtaagttttgtcaa 18611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 46319237 - 46319184
Alignment:
Q  321 taaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaa 374  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||| |||||||    
T  46319237 taaaaaaggagtaaaaagtcaattacccccctgaaattataactttcgtcaaaa 46319184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 16834365 - 16834408
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  16834365 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 16834408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 44431180 - 44431223
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  44431180 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 44431223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 52869658 - 52869701
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  52869658 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 52869701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 7287537 - 7287629
Alignment:
Q  325 aatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    ||||||||||||| ||||||||||  |||||||||||| |||||||||  | |||||| || ||  |||||||||||  |||| ||||||||||    
T  7287537 aatggagtaaataatcaattacccttctgaaattgtaagttttgtcaattacccccctaaaattaacaaaatgtcaattaccc-cctgaaattg 7287629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 6783128 - 6783160
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgta 361  Q
    |||||||||||||||||||||||||||||||||    
T  6783128 gagtaaatagtcaattacccccctgaaattgta 6783160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 24250407 - 24250451
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||    
T  24250407 ggagtaaatagtcaattatccccctgaaattgtaagtttcgtcaa 24250451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 37613716 - 37613676
Alignment:
Q  322 aaaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  37613716 aaaaaaggagtaaatagtcaatttcccccctgaaattgtaa 37613676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 38787532 - 38787588
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||| ||||||||||||||||||||||| |||  ||||  |||||||||||    
T  38787532 gagtaaataggcaattacccccctgaaattgtaagtttcatcaattatccccctgaa 38787588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 1799861 - 1799818
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||    
T  1799861 gagtaaatagtcaattacccccttgaaattgtaagtttcgtcaa 1799818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 31435613 - 31435558
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||||||||| ||||||||||||||||| |||  ||||  |||||||||||    
T  31435613 agtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatccccctgaa 31435558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 40315683 - 40315640
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||    
T  40315683 gagtaaataggcaattaccctcctgaaattgtaagttttgtcaa 40315640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 42149249 - 42149206
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  42149249 gagtaaatagtcaatttcccccctgaaattgtaagttttatcaa 42149206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 44209101 - 44209144
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||    
T  44209101 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 44209144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 419
Target Start/End: Complemental strand, 6783973 - 6783888
Alignment:
Q  333 aaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgt 419  Q
    ||||||||||||| |||||||||||||||| ||| |||||  |||||| |||| ||  ||||| |||||  |||| |||||||||||    
T  6783973 aaatagtcaattatccccctgaaattgtaagtttcgtcaattatccccttgaaattaacaaaacgtcaattaccc-cctgaaattgt 6783888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 516
Target Start/End: Complemental strand, 11343341 - 11343303
Alignment:
Q  478 ccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  11343341 ccgttaactgccacgtggcactgacacatggtcaaaaaa 11343303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 516
Target Start/End: Complemental strand, 11501361 - 11501323
Alignment:
Q  478 ccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  11501361 ccgttaactgccacgtggcactgacacatggtcaaaaaa 11501323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 362
Target Start/End: Original strand, 13242193 - 13242227
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||| |||||||||||||||||    
T  13242193 ggagtaaatagtcaatttcccccctgaaattgtaa 13242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 362
Target Start/End: Complemental strand, 46295615 - 46295581
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||||| ||||||||||||||    
T  46295615 ggagtaaatagtcaattacctccctgaaattgtaa 46295581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 418
Target Start/End: Original strand, 48720770 - 48720856
Alignment:
Q  332 taaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||||||||| |||||||||||||| ||| |||||  ||||  || || ||  |||||||||||  |||| ||||||||||    
T  48720770 taaatagtcaattacctccctgaaattgtaagtttcgtcaattatccttctaaaattaacaaaatgtcaattaccctcctgaaattg 48720856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 48804044 - 48803990
Alignment:
Q  319 aataaaaatggagtaaatagtcaattaccccc-ctgaaattgtaacttttgtcaa 372  Q
    ||||||||  |||||||||||||||||||||| |||||||||||| ||| |||||    
T  48804044 aataaaaaatgagtaaatagtcaattaccccctctgaaattgtaagtttcgtcaa 48803990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 3898538 - 3898505
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  3898538 gagtaaatagtcaatttcccccctgaaattgtaa 3898505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 10386836 - 10386869
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  10386836 gagtaaatagtcaatttcccccctgaaattgtaa 10386869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 13243091 - 13243058
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  13243091 gagtaaatagtcaatttcccccctgaaattgtaa 13243058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 20898514 - 20898547
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  20898514 gagtaaatagtcaatttcccccctgaaattgtaa 20898547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 20899392 - 20899359
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  20899392 gagtaaatagtcaatttcccccctgaaattgtaa 20899359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 24982645 - 24982678
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  24982645 gagtaaatagtcaatttcccccctgaaattgtaa 24982678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 29329290 - 29329323
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  29329290 gagtaaatagtcaatttcccccctgaaattgtaa 29329323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 29330168 - 29330135
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  29330168 gagtaaatagtcaatttcccccctgaaattgtaa 29330135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 31675384 - 31675417
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||| |||||||||||||||||||||||    
T  31675384 gagtaaataggcaattacccccctgaaattgtaa 31675417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 35894065 - 35894098
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  35894065 gagtaaatagtcaatttcccccctgaaattgtaa 35894098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 37538565 - 37538532
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  37538565 gagtaaatagtcaatttcccccctgaaattgtaa 37538532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 41115351 - 41115384
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  41115351 gagtaaatagtcaatttcccccctgaaattgtaa 41115384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 43680364 - 43680397
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  43680364 gagtaaatagtcaatttcccccctgaaattgtaa 43680397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 51619409 - 51619442
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  51619409 gagtaaatagtcaatttcccccctgaaattgtaa 51619442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 8896919 - 8896963
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||||| ||| ||||||||| ||| |||||    
T  8896919 ggagtaaatagtcaattaccctcctaaaattgtaagtttcgtcaa 8896963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 18053683 - 18053723
Alignment:
Q  322 aaaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||| ||||||| ||| |||||||||||||    
T  18053683 aaaaatggagtaaatggtcaatttccctcctgaaattgtaa 18053723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 25228284 - 25228228
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||| ||||||||||| |||  ||||  |||||||||||    
T  25228284 gagtaaatagtcaatttcccccttgaaattgtaagtttcatcaattatccccctgaa 25228228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 27134257 - 27134313
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||| ||||| ||||| ||||||||||| |||||||||  | |||||||||    
T  27134257 gagtaaataggcaatttcccccttgaaattgtaagttttgtcaattacccccctgaa 27134313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 31676520 - 31676476
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||| ||||||||||| ||||||||||| ||| |||||    
T  31676520 ggagtaaataggcaattacccccttgaaattgtaagtttcgtcaa 31676476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 35392478 - 35392534
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||| |||||| ||||||||||||||||  |||||||||  | |||||||||    
T  35392478 gagtaaatattcaatttcccccctgaaattgtaggttttgtcaattacccccctgaa 35392534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 35393271 - 35393231
Alignment:
Q  332 taaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||| ||||||||||||||||| ||| |||||    
T  35393271 taaatagtcaatttcccccctgaaattgtaagtttcgtcaa 35393231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 35894944 - 35894888
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||| ||||||||| |||  ||||  |||||||||||    
T  35894944 gagtaaatagtcaatttcccccctaaaattgtaagtttcatcaattatccccctgaa 35894888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 44432374 - 44432331
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||    
T  44432374 ggagtaaatagtcaattac-cccctgaaattgtaagtttcgtcaa 44432331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 372
Target Start/End: Original strand, 52869915 - 52869951
Alignment:
Q  336 tagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  52869915 tagtcaattacccccctgaaattgtaagtttcgtcaa 52869951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 5e-88; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 324 - 516
Target Start/End: Original strand, 19897387 - 19897579
Alignment:
Q  324 aaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaag 423  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||||||||||||||    
T  19897387 aaattgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaag 19897486  T
Q  424 cgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  19897487 cgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 19897579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 17640353 - 17640540
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  17640353 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaatccccctgaatttggtaaaatgtcaaaaacccccctgaaattgtcaagcgtct 17640452  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  17640453 gtcaattacccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 17640540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 38559571 - 38559758
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  38559571 gagtaaatagtcgattacccccctgaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcatct 38559670  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38559671 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 38559758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 23094853 - 23094666
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||| |    
T  23094853 gagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaaacctcctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtat 23094754  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  23094753 gtcaattatccccctccgttaatttcctccatccaacatgctgatgtggccgttaactaccacgtggcactgacacatggtcagaaaa 23094666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 1301227 - 1301412
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  1301227 gagtaaatagtcaattatccccttgaaattgtaacttttgtcaaaaacccccctgaattttgcaaaatgtcaaaaatcc--ctgaaattgtcaagcgtct 1301324  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  1301325 gtcaattacccccctccgttaatttcatccatccaacatgctgatgtggccgttaacggccacgtggcactgacacatggtcagaaaa 1301412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 34090064 - 34089878
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||  |||||||||||||||||||    
T  34090064 gagtaaatagtcaattaccccc-tgaaattgtaactttcgtcaaaaattcctctgaattttgcaaaatgtcaaaaacccctctgaaattgtcaagcgtct 34089966  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  34089965 gtcaattatccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 34089878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 319 - 516
Target Start/End: Complemental strand, 38561265 - 38561070
Alignment:
Q  319 aataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||| |||||||| ||| |||||||||||||||||||||||| || ||||||||||    
T  38561265 aataaaaaatgagtaaatagtcaattaccccc-tgaaattgtaactttcgtcaaaaacccctctgaattttgcaaaatgtcaaaaaaccccctgaaattg 38561167  T
Q  419 tcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  38561166 tcaagcgtctgtcaattac-cccctccgttaatttcctccatccaacatgctgatgtggctgttaactgccacgtggcactgacacatggtcagaaaa 38561070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 34088576 - 34088761
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34088576 gagtaaatagtcaattaccccc-tgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaaccc-cctgaaattgtcaagcgtct 34088673  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||||||| ||||    
T  34088674 gtcaattacccccctccgttaatttcctccatccaacacgctgatgtgaccgttaactaccacgtggcactgacacatggtcaaaaaa 34088761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 325 - 516
Target Start/End: Complemental strand, 43492887 - 43492696
Alignment:
Q  325 aatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagc 424  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||  ||||||| || ||||||||||||||||    
T  43492887 aatggagtaaatggtcaattacccccctgaaattgtaactttcgtcaaaaccccccctgaattttgcaaaacatcaaaaatccccctgaaattgtcaagc 43492788  T
Q  425 gtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| ||||||||||||||||    
T  43492787 gtctgtcaattacccccctccgttaatttcctccatccaacatgttgatgtggccgttaactgccgcgtggcacttacacatggtcagaaaa 43492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 1302902 - 1302717
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||    
T  1302902 gagtaaatagtcaattaccctc-tgaaattgtaactttcgtcaaaaatccccctaaattttgtaaaatgtcaaaaatccccctgaaattgtcaagcgtct 1302804  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  1302803 gtcaattaccccc-tccgttaatttcctccatccaacatgctgatgtggctgttaactgccacgtggcactgacacatggtcagaaaa 1302717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 329 - 495
Target Start/End: Complemental strand, 19898920 - 19898754
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  ||| || ||||||||||||||||     
T  19898920 gagtaaatagtcaattacccccctaaaattgtaacttttgtcaaaaacccccctgaattttgcaaaatgtcaaacccccccccgaaattgtcaagcgtcg 19898821  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtgg 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19898820 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtgg 19898754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 324 - 516
Target Start/End: Original strand, 34384969 - 34385162
Alignment:
Q  324 aaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacct-gaaattgtcaa 422  Q
    |||| |||||||||||||||| | ||||||||||||||| ||| |||||||| |||| |||||||||||||| ||||||||||| ||| |||||||||||    
T  34384969 aaattgagtaaatagtcaattgctcccctgaaattgtaattttcgtcaaaaaaccccttgaattttgcaaaacgtcaaaaaccccccttgaaattgtcaa 34385068  T
Q  423 gcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34385069 gcgtctgtcaattaccctcctctgttaatttcctctatccaacatgctgatgtggccgttaactgccatgtggcactgccacatggtcagaaaa 34385162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 26626685 - 26626497
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacc-tgaaattgtcaagcgtc 427  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||  ||||||||||||| |||| ||||||| ||| || |||||||||||||||||    
T  26626685 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaactcccctgaattttgtaaaacgtcaaaacccccccctgaaattgtcaagcgtc 26626586  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||| || ||||||    
T  26626585 tgtcaattacgcccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtgacaatgacacatagttagaaaa 26626497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 323 - 516
Target Start/End: Original strand, 26625036 - 26625227
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaa 422  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| || ||||| || |||||||||||||||| |||||||   | | ||||||||||||    
T  26625036 aaaaaggagtaaatagtcaattaccccc-tgaaattgtaactttcgtaaaaaaccctcctgaattttgcaaaacgtcaaaacatc-cttgaaattgtcaa 26625133  T
Q  423 gcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  26625134 gcgtctgtcaattaccctcatccgttaatttcctccatccaacatgctgatgtggccgttaacagccacgtggcactgacacatggtcagaaaa 26625227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 34386573 - 34386387
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||| | |||||||||  ||||||||||||||| || ||||| | |  |||||||||||||| ||||||||  | | | ||||| ||||||||||    
T  34386573 gagtaaataattaattacccct-tgaaattgtaactttcgttaaaaaactctttgaattttgcaaaacgtcaaaaattcccttaaaattatcaagcgtct 34386475  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  34386474 gtcaattacccccctccgttaatttcctccatccaacatgttgatgtggccgttaactgccatgtggcactgccacatggtcagaaaa 34386387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 329 - 500
Target Start/End: Original strand, 639857 - 640024
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||   || ||||||||||||||  |||||||  | | |||| |||||||||||||    
T  639857 gagtaaatagtcaattaccctcccgaaattgtaactttcgtcaaaaaattcc-tgaattttgcaaaagatcaaaaaagcccttgaa-ttgtcaagcgtct 639954  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactg 500  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  639955 gtcaattacccc--tccgttaatttcctccatcaaacatgctgatgtggccgttaactgccatgcggcactg 640024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 397 - 516
Target Start/End: Original strand, 23093278 - 23093397
Alignment:
Q  397 gtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggc 496  Q
    |||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||||||| ||| |    
T  23093278 gtcaaaaaaccccctgaaattgtcaagcgtctgtcaattatccccctccgttaatttcctccatccaacatgttgatgtagctgttaactgccacgtgac 23093377  T
Q  497 actgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||    
T  23093378 actgacacatggtcagaaaa 23093397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 319 - 415
Target Start/End: Complemental strand, 17641840 - 17641744
Alignment:
Q  319 aataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaa 415  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  17641840 aataaaaatagagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaa 17641744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 329 - 489
Target Start/End: Complemental strand, 19877766 - 19877608
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||| ||| |||||| |||||| |||||||  |||  ||||||||||||||  |||||| ||| ||||||||||| ||||| ||    
T  19877766 gagtaaatagtcaattaccctcctaaaattgcaactttcgtcaaaatccccattgaattttgcaaaacttcaaaacccc-cctgaaattgttaagcgcct 19877668  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 489  Q
    | ||||||| ||| ||||| ||||||||||||||||||||||||  |||||||||||||||    
T  19877667 gccaattactccc-tccgtcaatttcctccatccaacatgctgacatggccgttaactgcc 19877608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 328 - 451
Target Start/End: Original strand, 43492542 - 43492663
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctg-aattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgt 426  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||| |||| || |||||||||||| ||| ||||||| ||||||||||||||||||    
T  43492542 ggagtaaatagtcaattacctccctgaaattgtaactttcgtcaaaaa-ccccttgaaattttgcaaaacgtc-aaaacccccctgaaattgtcaagcgt 43492639  T
Q  427 ctgtcaattacccccctccgttaat 451  Q
    |||||||||| ||||||||||||||    
T  43492640 ctgtcaatta-ccccctccgttaat 43492663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 440 - 511
Target Start/End: Complemental strand, 17641741 - 17641670
Alignment:
Q  440 ccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtca 511  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  17641741 ccctccgttaatttcctccatccaacatgctgatgtggccattaactgccacgtggcactgacacatggtca 17641670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 347 - 448
Target Start/End: Original strand, 36429300 - 36429401
Alignment:
Q  347 ccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccg 446  Q
    |||||||||||||||||||| ||||||||||||||||| ||||   |||  |||||||| | ||||||||| |||| |||| ||||||||||||||||||    
T  36429300 ccccctgaaattgtaactttcgtcaaaaatccccctgatttttaagaaacttcaaaaacgcccctgaaattatcaaacgtcagtcaattacccccctccg 36429399  T
Q  447 tt 448  Q
    ||    
T  36429400 tt 36429401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 23093239 - 23093295
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  23093239 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaaccccctgaa 23093295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 448
Target Start/End: Complemental strand, 5348641 - 5348522
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||| |||  ||||||||||||||||| |||| |||||||| |||||||| ||||   |||  ||||||| || |||||||||| ||| |||      
T  5348641 gagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgtta 5348542  T
Q  429 gtcaattacccccctccgtt 448  Q
    ||||||||||||||||||||    
T  5348541 gtcaattacccccctccgtt 5348522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 443
Target Start/End: Original strand, 5347739 - 5347837
Alignment:
Q  345 acccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccct 443  Q
    ||||| |||||||||||||||| |||||||| |||||||| ||||   |||  |||||||||| ||||||||| |||| |||  |||||||||||||||    
T  5347739 acccctctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 5347837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 445
Target Start/End: Complemental strand, 33136700 - 33136607
Alignment:
Q  352 tgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctcc 445  Q
    ||||| |||||||||||||||||| | |||| | ||||||||||  |||||||| | ||||||||||| || |||  |||||||||||||||||    
T  33136700 tgaaagtgtaacttttgtcaaaaaactccctaatttttgcaaaacttcaaaaactcccctgaaattgttaaacgttagtcaattacccccctcc 33136607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 347 - 448
Target Start/End: Complemental strand, 36681966 - 36681867
Alignment:
Q  347 ccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccg 446  Q
    |||| ||||||||||||||| || |||||||||||||| ||||  ||||  |||||  ||||  |||||||||||| |||  ||||||||||||||||||    
T  36681966 ccccttgaaattgtaactttcgttaaaaatccccctgatttttaaaaaacttcaaaccccca--tgaaattgtcaaacgttagtcaattacccccctccg 36681869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 11664947 - 11664996
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||||||||    
T  11664947 aaaatcgagtaaataggcaattacccccctgaaattgtaaattttgtcaa 11664996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 41210343 - 41210287
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||||||||||||||||||||| ||| |||||  |||||| ||||    
T  41210343 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattatccccttgaa 41210287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 13307183 - 13307120
Alignment:
Q  322 aaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||  ||||  |||||||||||    
T  13307183 aaaaaaggagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatccccctgaa 13307120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 41084209 - 41084252
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  41084209 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 41084252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 418
Target Start/End: Complemental strand, 1144492 - 1144403
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||  | |||||| || ||  |||||||||||  || | ||||||||||    
T  1144492 gagtaaatagtcaactacccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattactcccctgaaattg 1144403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 4299800 - 4299744
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||  |||||||||||    
T  4299800 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatccccctgaa 4299744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 5575153 - 5575109
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||    
T  5575153 ggagtaaatagtcaattactcccctgaaattgtaagtttcgtcaa 5575109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 16868447 - 16868487
Alignment:
Q  322 aaaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  16868447 aaaaatggagtaaatagtcaatttcccccctgaagttgtaa 16868487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 26395377 - 26395421
Alignment:
Q  318 caataaaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||  |||||||||||||||| |||||||||||||||||    
T  26395377 caataaaaaaagagtaaatagtcaatttcccccctgaaattgtaa 26395421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 4992893 - 4992936
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||    
T  4992893 gagtaaatagtcaattacccctctgaaattgtaagtttcgtcaa 4992936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 9587508 - 9587551
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||    
T  9587508 gagtaaatagacaattacccccctgaaattgtaagtttcgtcaa 9587551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 444
Target Start/End: Original strand, 31808297 - 31808392
Alignment:
Q  349 ccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctc 444  Q
    ||||||| |||||||||| |||||||||  |||||| ||||   |||  |||||||| | ||||||||||| || |||  ||||||||||||||||    
T  31808297 ccctgaatttgtaactttcgtcaaaaatttccctgatttttaagaaacttcaaaaactctcctgaaattgttaaacgttagtcaattacccccctc 31808392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 32272359 - 32272402
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  32272359 gagtaaatagtcaatttcccccctgaaattgtaagttttatcaa 32272402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 36499330 - 36499271
Alignment:
Q  326 atggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||||||||||||| ||| ||||||||||||| ||| |||||  | |||||||||    
T  36499330 atggagtaaatagtcaatttccctcctgaaattgtaagtttcgtcaattacccccctgaa 36499271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Complemental strand, 39761450 - 39761415
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||| |||||||||||||||||    
T  39761450 tggagtaaatagtcaatttcccccctgaaattgtaa 39761415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 3999858 - 3999900
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||    
T  3999858 agtaaatagtcaatttccctcctgaaattgtaagttttgtcaa 3999900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 459469 - 459502
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  459469 gagtaaatagtcaatttcccccctgaaattgtaa 459502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 729317 - 729369
Alignment:
Q  319 aataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||| ||||||||||||||||||  |||||||||||||||| ||| |||||    
T  729317 aataaaagtggagtaaatagtcaatt-tccccctgaaattgtaagtttcgtcaa 729369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 970432 - 970465
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  970432 gagtaaatagtcaatttcccccctgaaattgtaa 970465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 2061461 - 2061428
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  2061461 gagtaaatagtcaatttcccccctgaaattgtaa 2061428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 6681369 - 6681336
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  6681369 gagtaaatagtcaatttcccccctgaaattgtaa 6681336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 8159935 - 8159968
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  8159935 gagtaaatagtcaatttcccccctgaaattgtaa 8159968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 8408262 - 8408229
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  8408262 gagtaaatagtcaatttcccccctgaaattgtaa 8408229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 9772231 - 9772264
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  9772231 gagtaaatagtcaatttcccccctgaaattgtaa 9772264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 11445938 - 11445905
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  11445938 gagtaaatagtcaatttcccccctgaaattgtaa 11445905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 12403559 - 12403592
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  12403559 gagtaaatagtcaatttcccccctgaaattgtaa 12403592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 17526056 - 17526089
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  17526056 gagtaaatagtcaatttcccccctgaaattgtaa 17526089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 17526935 - 17526902
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  17526935 gagtaaatagtcaatttcccccctgaaattgtaa 17526902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 18146547 - 18146514
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  18146547 gagtaaatagtcaatttcccccctgaaattgtaa 18146514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 19293320 - 19293267
Alignment:
Q  319 aataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||  |||||||||| |||||||| |||||||||||||| ||| |||||    
T  19293320 aataaaaaacgagtaaataggcaattacctccctgaaattgtaagtttcgtcaa 19293267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 21632533 - 21632500
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  21632533 gagtaaatagtcaatttcccccctgaaattgtaa 21632500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 21639911 - 21639944
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  21639911 gagtaaatagtcaatttcccccctgaaattgtaa 21639944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 21640780 - 21640747
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  21640780 gagtaaatagtcaatttcccccctgaaattgtaa 21640747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 22613676 - 22613643
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  22613676 gagtaaatagtcaatttcccccctgaaattgtaa 22613643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 38396253 - 38396220
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  38396253 gagtaaatagtcaatttcccccctgaaattgtaa 38396220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 39760569 - 39760602
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  39760569 gagtaaatagtcaatttcccccctgaaattgtaa 39760602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 43067515 - 43067548
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  43067515 gagtaaatagtcaatttcccccctgaaattgtaa 43067548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 5576346 - 5576390
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||| ||||||||||  ||||||||||| |||||||||    
T  5576346 ggagtaaataggcaattacccctatgaaattgtaagttttgtcaa 5576390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 26359971 - 26359924
Alignment:
Q  324 aaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||| |||||||||||||||||| ||||||||||||||| ||| |||||    
T  26359971 aaattgagtaaatagtcaattac-cccctgaaattgtaattttcgtcaa 26359924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 2e-87; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 31286980 - 31286793
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  31286980 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgatattgtcaagcgtct 31286881  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  31286880 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 31286793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 31285469 - 31285657
Alignment:
Q  329 gagtaaatagtcaattacccc-cctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31285469 gagtaaatagtcaattaccccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 31285568  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  31285569 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 31285657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 35394826 - 35394639
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||| |||    
T  35394826 gagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccatgaaattgtcaagcatct 35394727  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35394726 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 35394639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 35393163 - 35393350
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  35393163 gagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaattcccctgaattttgcaaaatgtcaaaaaaccccctgaaattgtcaagcgtct 35393262  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  35393263 gtcaattatccccctccgttaatttcctccatccaacatgctgatgtggctgttaactgccacgtggcactgacacatggtaagaaaa 35393350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 329 - 498
Target Start/End: Complemental strand, 29721194 - 29721028
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||  ||||||||||||||||| |    
T  29721194 gagtaaatagtcaattacccccttgaaattgtaactttcttcaaaaa-ccccctgaattttgcaaaacgtcaaaaaccc--ctgaaattgtcaagcgttt 29721098  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcac 498  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  29721097 gtcaattacccccctccgttaatttcctccatccaagatgctgatgtggctgttaactgccacgtggcac 29721028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 329 - 490
Target Start/End: Original strand, 34894195 - 34894356
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||||| | ||||||||||||||||  |||||||  | |||||||||||||| ||||     
T  34894195 gagtaaatagtcaattacccccttgaaattgtagctttcgtcaaaaattctcctgaattttgcaaaacttcaaaaaaacccctgaaattgtcaaacgtca 34894294  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcca 490  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||  |||  |||||||||||    
T  34894295 gtcaaatacccccatccgttaatttcctccatccaacatgctgacatggatgttaactgcca 34894356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 26157272 - 26157362
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgt 419  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||| |||||||||||    
T  26157272 gagtaaatagtcaattgcccccctgaaattgtaatttttgtcaaaaacccccttgaattttgcaaaacgtcaaaaacccccctgaaattgt 26157362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 500
Target Start/End: Complemental strand, 34895603 - 34895456
Alignment:
Q  352 tgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaat 451  Q
    |||||||||| ||||| | |||||  |  |||||||||||||||  ||||||  || | |||||||||||| |||| ||||| |||||||||||||||||    
T  34895603 tgaaattgtagcttttataaaaaactcttctgaattttgcaaaacttcaaaactcc-cttgaaattgtcaaacgtcagtcaaatacccccctccgttaat 34895505  T
Q  452 ttcctccatccaacatgctgatgtggccgttaactgccatgtggcactg 500  Q
    ||||||||| |||||||||||  |||| ||||| ||||| |||||||||    
T  34895504 ttcctccattcaacatgctgacatggctgttaattgccacgtggcactg 34895456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 448
Target Start/End: Complemental strand, 36068220 - 36068123
Alignment:
Q  351 ctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgtt 448  Q
    ||||||||||| |||| |||||||| |||||||| ||||   |||| ||||||| || ||||||||||||||  ||  ||||||||||||||||||||    
T  36068220 ctgaaattgtagctttcgtcaaaaaaccccctgatttttaggaaatttcaaaaaaccccctgaaattgtcaaatgttagtcaattacccccctccgtt 36068123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 444
Target Start/End: Original strand, 24240589 - 24240681
Alignment:
Q  352 tgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctc 444  Q
    |||||||||||||||||||||||| |||| ||| |||||||||   |||||||  | ||||||||||| ||  ||  ||||||||||||||||    
T  24240589 tgaaattgtaacttttgtcaaaaacccccttgatttttgcaaagcttcaaaaaaacccctgaaattgttaaatgttagtcaattacccccctc 24240681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 26928071 - 26928114
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  26928071 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 26928114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 497
Target Start/End: Complemental strand, 46220848 - 46220680
Alignment:
Q  326 atggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcg 425  Q
    |||||||||||| ||||||| ||  ||||||||| |  ||| ||||||||||||  ||||||||||||||  |||| ||    ||||||||| |||| ||    
T  46220848 atggagtaaataatcaattatccttctgaaattgcagttttcgtcaaaaatccct-tgaattttgcaaaacttcaagaaaat-cctgaaattatcaaacg 46220751  T
Q  426 tctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggca 497  Q
    ||  |||| ||||||| |||| || |||||||| ||||| ||| |||  |||||||||||||||| ||||||    
T  46220750 tcaatcaaataccccc-tccgctagtttcctccctccaatatgttgacatggccgttaactgccacgtggca 46220680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 395
Target Start/End: Complemental strand, 23351725 - 23351660
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaa 395  Q
    |||||||||||||||||||||  ||||||||||||||| || ||||| |||| | ||||||||||||    
T  23351725 gagtaaatagtcaattacccct-tgaaattgtaactttcgttaaaaacccccttaaattttgcaaaa 23351660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 362
Target Start/End: Original strand, 38353965 - 38354003
Alignment:
Q  324 aaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  38353965 aaatggagtaaatagtcaatttcccccctgaaattgtaa 38354003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 28311475 - 28311571
Alignment:
Q  321 taaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||| |||||  ||||| ||||| ||  |||||  ||||  |||| ||||||||||    
T  28311475 taaatatggagtaaatagtcaatt-cccccctgaaattgtaagtttcgtcaattatccctctgaaattaacaaaacttcaatcacccccctgaaattg 28311571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 7337163 - 7337219
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||  ||||| |||||    
T  7337163 gagtaaatagtcaatttcccccctgaaattgtaagttttatcaattatccctctgaa 7337219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 21125750 - 21125694
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||  | |||||||||    
T  21125750 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaa 21125694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 29417151 - 29417207
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||  | |||||||||    
T  29417151 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaa 29417207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 30890209 - 30890245
Alignment:
Q  326 atggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||||| |||||||||||||||||    
T  30890209 atggagtaaatagtcaatttcccccctgaaattgtaa 30890245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 34486964 - 34486877
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    ||||||||||||||||||||| ||||||||||| |||  ||||  |||||||| || ||  |||||||||||  |||| ||||||||||    
T  34486964 agtaaatagtcaattaccccc-tgaaattgtaagtttcatcaattatccccctaaaattaacaaaatgtcaattacccccctgaaattg 34486877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 17774288 - 17774331
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||    
T  17774288 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 17774331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 46230311 - 46230272
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  46230311 aaaattgagtaaatagtcaatttcccccctgaaattgtaa 46230272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 347 - 389
Target Start/End: Complemental strand, 3987353 - 3987311
Alignment:
Q  347 ccccctgaaattgtaacttttgtcaaaaatccccctgaatttt 389  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||    
T  3987353 ccccctgaaattgtaactttcgtcaaaaatcctcctgattttt 3987311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 362
Target Start/End: Complemental strand, 5668376 - 5668342
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||| |||||||||||||||||    
T  5668376 ggagtaaatagtcaatttcccccctgaaattgtaa 5668342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 362
Target Start/End: Original strand, 18120244 - 18120282
Alignment:
Q  324 aaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  18120244 aaatggagtaaatagtcaatttccctcctgaaattgtaa 18120282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 28294240 - 28294282
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||    
T  28294240 agtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 28294282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 516
Target Start/End: Original strand, 34596473 - 34596579
Alignment:
Q  411 tgaaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccatgtggcactgacacatggt 509  Q
    |||||||||||| |||||||||| |||| |||||||||| ||| ||   || |||||||| | ||||  |||||||| | | ||| ||||||||| ||||    
T  34596473 tgaaattgtcaaacgtctgtcaaatacctccctccgttagttttctatgtctaacatgctaacgtggttgttaactgtcaacgtgacactgacacgtggt 34596572  T
Q  510 cagaaaa 516  Q
    |||||||    
T  34596573 cagaaaa 34596579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 362
Target Start/End: Original strand, 39402781 - 39402815
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||| |||||||||||||||||    
T  39402781 ggagtaaatagtcaatttcccccctgaaattgtaa 39402815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 417
Target Start/End: Original strand, 47170182 - 47170272
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaatt 417  Q
    ||||||||||| |||||| ||||||||||||||||| |||  ||||  | ||||||||| ||  |||||| ||||  |||| |||||||||    
T  47170182 tggagtaaatactcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaatttcaattacccccctgaaatt 47170272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 3627936 - 3627969
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  3627936 gagtaaatagtcaatttcccccctgaaattgtaa 3627969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 5668245 - 5668278
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  5668245 gagtaaatagtcaatttcccccctgaaattgtaa 5668278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 8640898 - 8640931
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  8640898 gagtaaatagtcaatttcccccctgaaattgtaa 8640931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 17272661 - 17272628
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  17272661 gagtaaatagtcaatttcccccctgaaattgtaa 17272628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 33697445 - 33697388
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||||| ||||||| ||||||||||||||| ||| |||||  | |||||||||    
T  33697445 ggagtaaataggcaattactcccctgaaattgtaagtttcgtcaattacccccctgaa 33697388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 38170901 - 38170934
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  38170901 gagtaaatagtcaatttcccccctgaaattgtaa 38170934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 38171773 - 38171740
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  38171773 gagtaaatagtcaatttcccccctgaaattgtaa 38171740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 40667924 - 40667957
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  40667924 gagtaaatagtcaatttcccccctgaaattgtaa 40667957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 41080262 - 41080295
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  41080262 gagtaaatagtcaatttcccccctgaaattgtaa 41080295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 45155790 - 45155757
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  45155790 gagtaaatagtcaatttcccccctgaaattgtaa 45155757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 46100124 - 46100181
Alignment:
Q  328 ggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||||||||||||| ||||| ||||||||||| |||| ||||  | |||||||||    
T  46100124 ggagtaaatagtcaatttcccccttgaaattgtaaattttatcaattacccccctgaa 46100181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 46101004 - 46100971
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  46101004 gagtaaatagtcaatttcccccctgaaattgtaa 46100971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 47171067 - 47171034
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  47171067 gagtaaatagtcaatttcccccctgaaattgtaa 47171034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 8296258 - 8296290
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgta 361  Q
    |||||||||||||||| ||||||||||||||||    
T  8296258 gagtaaatagtcaatttcccccctgaaattgta 8296290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 12231007 - 12231039
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgta 361  Q
    ||||||||||||||||||||||| |||||||||    
T  12231007 gagtaaatagtcaattacccccccgaaattgta 12231039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 19495966 - 19495934
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||| |||||||||||||||||    
T  19495966 agtaaatagtcaatttcccccctgaaattgtaa 19495934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 24466299 - 24466355
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||| ||||||||||||| |||  ||||  |||||||||||    
T  24466299 gagtaaatagtcaatttccctcctgaaattgtaagtttcatcaattatccccctgaa 24466355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 34345220 - 34345252
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgta 361  Q
    |||||||||||||||| ||||||||||||||||    
T  34345220 gagtaaatagtcaatttcccccctgaaattgta 34345252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 34994790 - 34994734
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||| ||||||| ||||||||||||||| |||  ||||  |||||||||||    
T  34994790 gagtaaataggcaattacacccctgaaattgtaagtttcatcaattatccccctgaa 34994734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 38354847 - 38354815
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||| |||||||||||||||||    
T  38354847 agtaaatagtcaatttcccccctgaaattgtaa 38354815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 44744261 - 44744316
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||  |||||||||||    
T  44744261 gagtaaatagtcaatt-cccccctgaaattgtaagtttcatcaattatccccctgaa 44744316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 2e-87; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 10917859 - 10918046
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10917859 gagtaaatagtcaatcacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 10917958  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  10917959 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 10918046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 1387706 - 1387519
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1387706 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccttgaaattgtcaagcgtct 1387607  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  1387606 gtcaattaccctcctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 1387519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 329 - 516
Target Start/End: Complemental strand, 4139029 - 4138843
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  4139029 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaaccc-cctgaaattgtcaagcgtcg 4138931  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  4138930 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 4138843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 4137656 - 4137842
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  4137656 gagtaaatagtcaattacccc-ctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcgtct 4137754  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  4137755 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccacgtggcactgacacatggtcaaaaaa 4137842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 329 - 509
Target Start/End: Complemental strand, 10919386 - 10919206
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  10919386 gagtaaatagtcaattactcccctgaaattgtaactttcgtcaaaaacccacatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 10919287  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggt 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  10919286 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggacgttaactgccacgtggcactgacacatggt 10919206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 1378455 - 1378641
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  1378455 gagtaaatagtcaattacccttctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaaccc-cctgaaattgtcaagcgtct 1378553  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||    
T  1378554 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgtcacgtggcactgacacatggtcaaaaaa 1378641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 1386203 - 1386389
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  1386203 gagtaaatagtcaattacccttctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaaccc-cctgaaattgtcaagcgtct 1386301  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||    
T  1386302 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgtcacgtggcactgacacatggtcaaaaaa 1386389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 329 - 448
Target Start/End: Original strand, 17732015 - 17732134
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||| |||  |||||||||||||||||  ||| ||||||||||||||||| ||||  ||||| ||||||| || |||||||||| ||| |||      
T  17732015 gagtaaataggcaaaaacccccctgaaattgtagttttcgtcaaaaatccccctgatttttagaaaatttcaaaaaaccccctgaaattgacaaacgtta 17732114  T
Q  429 gtcaattacccccctccgtt 448  Q
    ||||||||||||||||||||    
T  17732115 gtcaattacccccctccgtt 17732134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 329 - 443
Target Start/End: Original strand, 15347432 - 15347546
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||| |||  |||||||||||||||||||||| |||||||| |||||||| ||||   |||  |||||||||| ||||||||| |||| |||      
T  15347432 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 15347531  T
Q  429 gtcaattacccccct 443  Q
    |||||||||||||||    
T  15347532 gtcaattacccccct 15347546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 6276028 - 6276158
Alignment:
Q  382 tgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattaccc---ccctcc---gttaatttcctccatccaacatgctgatgt 475  Q
    ||||||||||||||| ||||||||   |||||||||||||| || | ||||| |||||   ||||||   ||||||||||||||||||||||| |||  |    
T  6276028 tgaattttgcaaaatatcaaaaactt-cctgaaattgtcaaacgacggtcaaataccctccccctcccccgttaatttcctccatccaacatgttgacat 6276126  T
Q  476 ggccgttaactgccatgtggcactgacacatg 507  Q
    ||  ||||||||||||||||||||| ||||||    
T  6276127 ggttgttaactgccatgtggcactgccacatg 6276158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 448
Target Start/End: Complemental strand, 17732934 - 17732832
Alignment:
Q  346 cccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctcc 445  Q
    ||||| ||||||||||||||| |||||||| |||||||| ||||   |||  |||||||||| ||||||||| |||| |||  | |||||||||||||||    
T  17732934 cccccttgaaattgtaactttcgtcaaaaaaccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagccaattacccccctcc 17732835  T
Q  446 gtt 448  Q
    |||    
T  17732834 gtt 17732832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 441
Target Start/End: Complemental strand, 30710413 - 30710302
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||| |||  |||||| |||||||||| |||| |||||||| |||||||| ||||   |||  |||||||||| |||||||||| ||| |||      
T  30710413 gagtaaataggcaaaaacccccttgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaccc-cctgaaattgccaaacgtta 30710315  T
Q  429 gtcaattaccccc 441  Q
    |||||||||||||    
T  30710314 gtcaattaccccc 30710302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 15348315 - 15348213
Alignment:
Q  345 acccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctc 444  Q
    ||||||||||||||||| |||| ||||||||| ||||||| ||||   |||  ||||||| || |||||||||| ||| |||  ||||||||||||| ||    
T  15348315 acccccctgaaattgtagctttcgtcaaaaat-cccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgttagtcaattacccccttc 15348217  T
Q  445 cgtt 448  Q
    ||||    
T  15348216 cgtt 15348213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 8940247 - 8940211
Alignment:
Q  326 atggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||||| |||||||||||||||||    
T  8940247 atggagtaaatagtcaatttcccccctgaaattgtaa 8940211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 417
Target Start/End: Original strand, 11098928 - 11099016
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaatt 417  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||  | ||||| ||| ||  |||||| ||||  |||| |||||||||    
T  11098928 gagtaaatagtcaattacccccttgaaattgtaagtttcgtcaattaccccccagaaattaacaaaatttcaattacccccctgaaatt 11099016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 22821131 - 22821187
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||  | |||||||||    
T  22821131 gagtaaatagtcaatttcccccctgaaattgtaagttttatcaattacccccctgaa 22821187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 30709507 - 30709551
Alignment:
Q  345 acccccctgaaattgtaacttttgtcaaaaatccccctgaatttt 389  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||    
T  30709507 acccctctgaaattgtaactttcgtcaaaaatccccctgattttt 30709551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 2318572 - 2318533
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  2318572 aaaattgagtaaatagtcaatttcccccctgaaattgtaa 2318533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 516
Target Start/End: Complemental strand, 6277217 - 6277150
Alignment:
Q  449 aatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||| ||||||||||  |||  ||||||||||| ||||||||| |||||| ||| ||||    
T  6277217 aatttcctccatctaacatgctgacatggttgttaactgccacgtggcactgccacatgatcaaaaaa 6277150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 21784391 - 21784352
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  21784391 aaaatcgagtaaatagtcaattacccctctgaaattgtaa 21784352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Complemental strand, 22822286 - 22822251
Alignment:
Q  327 tggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||| |||||||||||||||||    
T  22822286 tggagtaaatagtcaatttcccccctgaaattgtaa 22822251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 34657803 - 34657846
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||    
T  34657803 gagtaaatagtcaattacccccttgaaattgtaagtttcgtcaa 34657846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 23074300 - 23074342
Alignment:
Q  330 agtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||    
T  23074300 agtaaataggcaattacccccctgaaattgtaagtttcgtcaa 23074342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 29724216 - 29724170
Alignment:
Q  326 atggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||| |||| |||||||||||| ||| |||||    
T  29724216 atggagtaaatagtcaatttcccctctgaaattgtaagtttcgtcaa 29724170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 1327339 - 1327306
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  1327339 gagtaaatagtcaatttcccccctgaaattgtaa 1327306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 5430667 - 5430634
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||| |||||||||||||||||||||||    
T  5430667 gagtaaataggcaattacccccctgaaattgtaa 5430634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 445
Target Start/End: Original strand, 6008660 - 6008757
Alignment:
Q  348 cccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctcc 445  Q
    |||||||||||||| |||| |||||||| | |||||| ||||   |||  ||||||| || |||||||||| ||| |||  |||||| ||||||||||    
T  6008660 cccctgaaattgtagctttcgtcaaaaacctccctgatttttaggaaacttcaaaaagccccctgaaattgacaaacgttagtcaatcacccccctcc 6008757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 8743175 - 8743142
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  8743175 gagtaaatagtcaatttcccccctgaaattgtaa 8743142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 417
Target Start/End: Complemental strand, 8812943 - 8812858
Alignment:
Q  332 taaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaatt 417  Q
    ||||||||||||| ||||||||||||||||| |||  ||||  | ||||||||| ||  |||||  ||||| |||| |||||||||    
T  8812943 taaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaaatacccccctgaaatt 8812858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 11158107 - 11158140
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  11158107 gagtaaatagtcaatttcccccctgaaattgtaa 11158140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 11624629 - 11624662
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  11624629 gagtaaatagtcaatttcccccctgaaattgtaa 11624662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 15127801 - 15127768
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  15127801 gagtaaatagtcaatttcccccctgaaattgtaa 15127768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 15146655 - 15146622
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  15146655 gagtaaatagtcaatttcccccctgaaattgtaa 15146622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 18739412 - 18739379
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  18739412 gagtaaatagtcaatttcccccctgaaattgtaa 18739379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 24110272 - 24110305
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  24110272 gagtaaatagtcaatttcccccctgaaattgtaa 24110305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 25404075 - 25404108
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  25404075 gagtaaatagtcaatttcccccctgaaattgtaa 25404108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 32628761 - 32628728
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  32628761 gagtaaatagtcaatttcccccctgaaattgtaa 32628728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 5430183 - 5430223
Alignment:
Q  322 aaaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||| |||||||||| ||||||| |||||||||||||||    
T  5430183 aaaaattgagtaaataggcaattactcccctgaaattgtaa 5430223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 10624445 - 10624489
Alignment:
Q  319 aataaaaat-ggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||    
T  10624445 aataaaaataggagtaaataggcaattatccccctgaaattgtaa 10624489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 369
Target Start/End: Complemental strand, 11100080 - 11100041
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgt 369  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  11100080 gagtaaatagtcaattac-cccctgaaattgtaagttttgt 11100041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 23075435 - 23075379
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||| ||||||||||||| ||||||||| ||| |||||  | |||||||||    
T  23075435 gagtaaataggcaattacccccctaaaattgtaagtttcgtcaattacccccctgaa 23075379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 2e-69; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 323 - 516
Target Start/End: Complemental strand, 43201539 - 43201347
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaa 422  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||| ||||||| |||  |||||||||||||| |||||||| || ||||||||||||||    
T  43201539 aaaatcgagtaaatagtcaattaccccc-tgatattgtaacttttttcaaaaacccctatgaattttgcaaaacgtcaaaaaacctcctgaaattgtcaa 43201441  T
Q  423 gcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  43201440 gcgtctgtcaattactcctctccgttaatttcctccatccaacatgttgatgtggccgttaactgccacgtggcactgacacatggtcagaaaa 43201347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 329 - 516
Target Start/End: Original strand, 36764753 - 36764940
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaa-ttgtcaagcgtc 427  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||  ||| ||||||||||||    
T  36764753 gagtaaatagtcaattacccccc-gaaattgtaactttcgtcaaaaatcccccttaattttgcaaaacgtcaaaaacccccccaaaaattgtcaagcgtc 36764851  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| | |||||||||||||||    
T  36764852 tgtcaattacccccctccgttaatttcctccatccaacatgctaatgtggccgttaattgccacgtggcaccgccacatggtcagaaaa 36764940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 329 - 508
Target Start/End: Original strand, 39618028 - 39618207
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| |||||| ||||||||||||  ||||| |||| ||||||||||||||||||||    
T  39618028 gagtaaatagtcaattacccccctgaaattgtagctttcgtcaaaaaaccccctaaattttgcaaaacttcaaataccc-cctgaaattgtcaagcgtct 39618126  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccatgtggcactgacacatgg 508  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  39618127 gtcaattacccccctccgttaatatcttccatccaacatgctgatgtggccgttaactgcccacgtggcactgtcacatgg 39618207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 329 - 487
Target Start/End: Original strand, 10865184 - 10865340
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  10865184 gagtaaatagtcaattacccc--tgaaattgtaacttttgtcaaaaaccctcctgaattttgcaaaatgtcaaaaaccctcctgaaattatcaagcgtct 10865281  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg 487  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  10865282 gtcaattacccccctccgttaatttcctccatctaacatgctgatgtgacggttaactg 10865340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 329 - 490
Target Start/End: Complemental strand, 36766217 - 36766056
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    |||||||| ||||||||||||   ||||||| |||||| |||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  36766217 gagtaaatggtcaattaccccatcgaaattgcaactttcgtcaaaaatctccctgaattttgcaaaacgtcaaaatcccccctgaaattgtcaagcgtct 36766118  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcca 490  Q
    ||||||||| |||||||  |||||||||||||||||| |||||||||||| |||||||||||    
T  36766117 gtcaattacacccctccactaatttcctccatccaacgtgctgatgtggcagttaactgcca 36766056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 329 - 495
Target Start/End: Original strand, 45227217 - 45227380
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||| || || |||||||||||||| |||||||| |||| ||||||||| |||| ||||||| ||| ||||||||||||||||||||    
T  45227217 gagtaaatagtcaattatcctcc-gaaattgtaactttcgtcaaaaaaccccttgaattttgtaaaacgtcaaaacccc-cctgaaattgtcaagcgtct 45227314  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtgg 495  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  45227315 gtcaattatcccc-tccgttaatttcctccatccaacatgatgatgtggctgttaactgccacgtgg 45227380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 338 - 507
Target Start/End: Complemental strand, 36657735 - 36657566
Alignment:
Q  338 gtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattac 437  Q
    ||||||||||||||| ||||||||||||| ||||||||   |||||||||||||||||  |||||||||| ||||||||| |||| |||| ||||| |||    
T  36657735 gtcaattacccccctaaaattgtaactttcgtcaaaaacttccctgaattttgcaaaacttcaaaaaccctcctgaaattatcaaacgtcagtcaaatac 36657636  T
Q  438 ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatg 507  Q
    || ||||||||| ||||||||||||||||||||||   ||| ||||||||||| ||||||||| ||||||    
T  36657635 cctcctccgttattttcctccatccaacatgctgacagggctgttaactgccacgtggcactgccacatg 36657566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 329 - 500
Target Start/End: Original strand, 32946649 - 32946819
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||| ||    ||||||||||||||  ||||||| || | |||||||||||| ||||     
T  32946649 gagtaaatagtcaattatccctctgaaattgtagcttttgtcaaaa-tcttattgaattttgcaaaacttcaaaaaaccccttgaaattgtcaaacgtca 32946747  T
Q  429 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactg 500  Q
    ||||| |||||||||| |||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  32946748 gtcaaatacccccctctgttaatttcctccatccaacatgctgacatggctgttaactgccacgtggcactg 32946819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 380 - 516
Target Start/End: Original strand, 42684140 - 42684276
Alignment:
Q  380 cctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattaccccc-ctccgttaatttcctccatccaacatgctgatgtggc 478  Q
    ||||||||||| ||||  ||||||||||   ||||||||||||| | | ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  42684140 cctgaattttgtaaaacatcaaaaacccta-tgaaattgtcaagtgccggtcaattaccccctctctgttaatttcctccatccaacatgctgatgtggc 42684238  T
Q  479 cgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    |||||||||||||||||||||| |||||||||||||||    
T  42684239 cgttaactgccatgtggcactgccacatggtcagaaaa 42684276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 329 - 443
Target Start/End: Complemental strand, 39619388 - 39619273
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaa-tgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||||||| | | || | ||| ||||||||||||||||||     
T  39619388 gagtaaatagtcaattaccctcctgaaattgtagctttcgtcaaaaacccccctgaattttgcaaaactttaaataccccccctgaaattgtcaagcgtt 39619289  T
Q  428 tgtcaattacccccct 443  Q
    ||||||||||||||||    
T  39619288 tgtcaattacccccct 39619273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 329 - 458
Target Start/End: Complemental strand, 17600822 - 17600695
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtct 428  Q
    ||||||||||||||||||| || |||||||||| ||||  ||||||| || ||||||||||||||||  |||||||| ||| |||||||||||| ||||     
T  17600822 gagtaaatagtcaattacctcc-tgaaattgtagctttcatcaaaaa-cctcctgaattttgcaaaacttcaaaaactcacgtgaaattgtcaaacgtca 17600725  T
Q  429 gtcaattacccccctccgttaatttcctcc 458  Q
    ||||| |||||||||| |||||||||||||    
T  17600724 gtcaaatacccccctctgttaatttcctcc 17600695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 353 - 487
Target Start/End: Complemental strand, 45228879 - 45228746
Alignment:
Q  353 gaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaatt 452  Q
    ||||||||||||||  | |||||||| | |||||||||||||| ||||| ||| | |||||||||||||||| ||| |  |||| |||| ||| ||||||    
T  45228879 gaaattgtaactttcattaaaaatcctcttgaattttgcaaaacgtcaagaactcgcctgaaattgtcaagcttctcttgatta-ccccgtccattaatt 45228781  T
Q  453 tcctccatccaacatgctgatgtggccgttaactg 487  Q
    ||||||||| |||||||| |||||  |||||||||    
T  45228780 tcctccatctaacatgcttatgtgatcgttaactg 45228746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 382 - 485
Target Start/End: Complemental strand, 39259296 - 39259195
Alignment:
Q  382 tgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgt 481  Q
    ||||||||||||||| ||||||| || | ||||||| |||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||  ||| |||    
T  39259296 tgaattttgcaaaatttcaaaaatcctc-tgaaattatcaaacgtcagtcaaataccccc-tccgttaatttcctccatccaacatgctgacatggtcgt 39259199  T
Q  482 taac 485  Q
    ||||    
T  39259198 taac 39259195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 443
Target Start/End: Original strand, 4592617 - 4592741
Alignment:
Q  319 aataaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||| |||| |||| ||||| |||  |||||||||||||||||||||| |||||||| |||||||| ||||   |||  |||||||||| | |||||||     
T  4592617 aatataaatagagtgaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccatgaaatta 4592716  T
Q  419 tcaagcgtctgtcaattacccccct 443  Q
    |||| |||  |||||||||||||||    
T  4592717 tcaaacgttagtcaattacccccct 4592741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 516
Target Start/End: Original strand, 10175569 - 10175672
Alignment:
Q  413 aaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactg-ccatgtggcactgacacatggtca 511  Q
    ||||| |||| |||||||||| ||||||| |  |||||||||||||||| |||||||||| ||||| ||||| || ||||||| ||||| |||||||| |    
T  10175569 aaattctcaaacgtctgtcaaatacccccttt-gttaatttcctccatctaacatgctgacgtggctgttaaatgcccatgtgacactgccacatggtta 10175667  T
Q  512 gaaaa 516  Q
    |||||    
T  10175668 gaaaa 10175672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 490
Target Start/End: Original strand, 39257430 - 39257581
Alignment:
Q  329 gagtaaatagtcaattacccccc-tgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtc 427  Q
    ||||||||||||||||||||||| |||||||||| ||||  ||||||  |||||||||||||||||||          || | |||||||||||| | |     
T  39257430 gagtaaatagtcaattaccccccctgaaattgtagctttcatcaaaagcccccctgaattttgcaaaa----------ccccatgaaattgtcaaacttt 39257519  T
Q  428 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcca 490  Q
     ||||| || |||  ||||||||||||||||||||||||||||||  || | |||||||||||    
T  39257520 agtcaaatatccca-tccgttaatttcctccatccaacatgctgacatgactgttaactgcca 39257581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 17815462 - 17815505
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  17815462 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 17815505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 2695965 - 2695916
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||| |||||||||| ||||||||||| ||||||||||| |||||||||    
T  2695965 aaaattgagtaaataggcaattacccccatgaaattgtaagttttgtcaa 2695916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 9707867 - 9707900
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||||||||||||||||||||||||||||||||    
T  9707867 gagtaaatagtcaattacccccctgaaattgtaa 9707900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 121508 - 121564
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||  |||||||||||    
T  121508 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatccccctgaa 121564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 448
Target Start/End: Complemental strand, 4593519 - 4593420
Alignment:
Q  348 cccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgt 447  Q
    ||||||||| |||| |||| |||||||| |||||||| ||||   |||  ||||||| || |||||||||| ||| |||| |||||||| ||||||||||    
T  4593519 cccctgaaaatgtagctttcgtcaaaaa-ccccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgtcagtcaattatccccctccgt 4593421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 15831038 - 15830983
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||  |||||||||||    
T  15831038 gagtaaatagtcaattaccccc-tgaaattgtaagtttcgtcaattatccccctgaa 15830983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 19222853 - 19222897
Alignment:
Q  318 caataaaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||  |||||||||||||||| |||||||||||||||||    
T  19222853 caataaaaaaagagtaaatagtcaatttcccccctgaaattgtaa 19222897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 444
Target Start/End: Complemental strand, 39619280 - 39619240
Alignment:
Q  404 acccacctgaaattgtcaagcgtctgtcaattacccccctc 444  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  39619280 acccccctgaaattgtcaagcgtttgtcaattacccccctc 39619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 5439152 - 5439109
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||    
T  5439152 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 5439109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 9758284 - 9758327
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||    
T  9758284 gagtaaatagacaattacccccctgaaattgtaagtttcgtcaa 9758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 440
Target Start/End: Complemental strand, 22539226 - 22539136
Alignment:
Q  349 ccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccc 440  Q
    |||||||||||||||||| ||||| || |||||||| ||||  ||||  ||||||| || | |||||||||||| |||  ||||||||||||    
T  22539226 ccctgaaattgtaactttcgtcaagaa-ccccctgacttttaaaaaacttcaaaaaaccccatgaaattgtcaaacgttagtcaattacccc 22539136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 28586808 - 28586851
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    ||||||||||||||||||| |||||||||||||  |||||||||    
T  28586808 gagtaaatagtcaattacctccctgaaattgtaggttttgtcaa 28586851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 516
Target Start/End: Original strand, 39619170 - 39619225
Alignment:
Q  462 caacatgctgatgtggccgttaactg-ccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||| |||||||||||||||||| ||| ||||||||| ||||||| |||||||    
T  39619170 caacatgttgatgtggccgttaactgcccacgtggcactgccacatggccagaaaa 39619225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 43130154 - 43130119
Alignment:
Q  326 atggagtaaatagtcaattacccccctgaaattgta 361  Q
    ||||||||||||||||||| ||||||||||||||||    
T  43130154 atggagtaaatagtcaatttcccccctgaaattgta 43130119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Complemental strand, 17816325 - 17816237
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||  | |||| | || ||  |||||||||||  |||| ||||||||||    
T  17816325 gagtaaatagtcaattac-cccctgaaattgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaattacccccctgaaattg 17816237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 18059475 - 18059564
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    ||||||||||||| || |||| |||||||||||| ||| |||||  ||||||||||| ||  |||||  ||||  |||| ||||||||||    
T  18059475 gagtaaatagtcattttcccctctgaaattgtaagtttcgtcaattatccccctgaaattaacaaaacttcaattacccccctgaaattg 18059564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 22064753 - 22064720
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||||||| |||||||||||    
T  22064753 gagtaaatagtcaattacccccttgaaattgtaa 22064720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 28149862 - 28149950
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||||||||| ||||||||||||||||  ||| |||||  | ||||||||| ||  |||||| ||||  |||| ||||||||||    
T  28149862 gagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaatta-ccccctgaaattaacaaaatttcaattacccccctgaaattg 28149950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 28780081 - 28780170
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattg 418  Q
    |||||||||| ||| ||||||||||||||||||| ||| |||||  | ||||||||| ||   ||||  ||||| |||| ||||||||||    
T  28780081 gagtaaataggcaactacccccctgaaattgtaagtttcgtcaattacccccctgaaattaagaaaacttcaaatacccccctgaaattg 28780170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 516
Target Start/End: Complemental strand, 32947792 - 32947719
Alignment:
Q  443 tccgttaatttcctccatccaacatgctgatgtggccgttaactgccatgtggcactgacacatggtcagaaaa 516  Q
    ||||||||||||||||||| ||||| || |  || | ||||||||||| ||||||||| |||||| ||| ||||    
T  32947792 tccgttaatttcctccatcgaacatactaacatgactgttaactgccacgtggcactgccacatgatcaaaaaa 32947719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 36566558 - 36566525
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  36566558 gagtaaatagtcaatttcccccctgaaattgtaa 36566525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 40598419 - 40598452
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  40598419 gagtaaatagtcaatttcccccctgaaattgtaa 40598452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 41727214 - 41727181
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  41727214 gagtaaatagtcaatttcccccctgaaattgtaa 41727181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 42793890 - 42793857
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  42793890 gagtaaatagtcaatttcccccctgaaattgtaa 42793857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 45115006 - 45114913
Alignment:
Q  351 ctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctc 444  Q
    |||||||||||||||| |||||||| |||| ||| ||||   |||  |||||| ||| | |||||||||||| |||  || |||||||||||||    
T  45115006 ctgaaattgtaactttcgtcaaaaacccccttgacttttaagaaacttcaaaacccctcatgaaattgtcaaacgttagttaattacccccctc 45114913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 448
Target Start/End: Complemental strand, 10256601 - 10256506
Alignment:
Q  352 tgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgtt 448  Q
    |||||||||| |||| |||||||| |||||||| || |   |||  |||||||||| |||||||||| ||| |||  |||||||||||| |||||||    
T  10256601 tgaaattgtagctttcgtcaaaaacccccctgatttctaggaaacttcaaaaaccc-cctgaaattgccaaacgttagtcaattaccccgctccgtt 10256506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 15829901 - 15829964
Alignment:
Q  321 taaaaatggagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| |||||  | |||||||||    
T  15829901 taaaaatcgagtaaatagacaatta-ccccctgaaattgtaagtttcgtcaattacccccctgaa 15829964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 372
Target Start/End: Complemental strand, 28587691 - 28587639
Alignment:
Q  321 taaaaatg-gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||| |||||||||||||||| ||| ||||||||||||| ||| |||||    
T  28587691 taaaaatgcgagtaaatagtcaatttccctcctgaaattgtaaatttcgtcaa 28587639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 41287522 - 41287470
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccc 381  Q
    |||||||||||||||| | ||||||||||||||| ||| |||||  |||||||    
T  41287522 gagtaaatagtcaatttctcccctgaaattgtaagtttcgtcaattatccccc 41287470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 1331 - 1374
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  1331 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 1374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 95094 - 95051
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  95094 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 95051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 94240 - 94279
Alignment:
Q  323 aaaatggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  94240 aaaattgagtaaatagtcaattatccccctgaaattgtaa 94279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 447
Target Start/End: Original strand, 1984 - 2065
Alignment:
Q  364 ttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgt 447  Q
    |||||||||||| |||| ||| ||||||||||  |||||||||| ||||||||||| || |||  |||||||||||||||||||    
T  1984 ttttgtcaaaaaacccc-tgatttttgcaaaacttcaaaaaccc-cctgaaattgttaaacgttagtcaattacccccctccgt 2065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 33209 - 33160
Alignment:
Q  399 caaaaacccacctgaaattgtcaagcgtctgtcaattacccccctccgtt 448  Q
    ||||||||| |||||||||||||| |||  ||||||||||||||||||||    
T  33209 caaaaacccccctgaaattgtcaaacgttagtcaattacccccctccgtt 33160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 32367 - 32411
Alignment:
Q  345 acccccctgaaattgtaacttttgtcaaaaatccccctgaatttt 389  Q
    |||| ||||||||||||||||| |||||||||||| |||| ||||    
T  32367 accctcctgaaattgtaactttcgtcaaaaatccctctgattttt 32411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 417
Target Start/End: Original strand, 1711 - 1799
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccacctgaaatt 417  Q
    ||||||||||||||||  |||||||||||||||| |||  ||||  ||||||||||| ||  |||||| ||||  |||| |||||||||    
T  1711 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaattatccccctgaaattaacaaaatttcaattacccccctgaaatt 1799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 7081 - 7137
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||  | |||||||||    
T  7081 gagtaaatagtcaatttcccccctgaaattgtaagttttatcaattacccccctgaa 7137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 66585 - 66628
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||    
T  66585 gagtaaatagtcaattacacccctgaaattgtaagtttcgtcaa 66628  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 43501 - 43445
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaatccccctgaa 385  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||  | |||||||||    
T  43501 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaa 43445  T

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Target: scaffold0572 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 1821 - 1778
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaacttttgtcaa 372  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  1821 gagtaaatagtcaatttcccccctgaaattgtaagttttatcaa 1778  T

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Target: scaffold0498 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 5183 - 5216
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  5183 gagtaaatagtcaatttcccccctgaaattgtaa 5216  T

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Target: scaffold0498; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 11449 - 11413
Alignment:
Q  326 atggagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||||||  ||||||||||||||||    
T  11449 atggagtaaatagtcaattttccccctgaaattgtaa 11413  T

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Target: scaffold0320 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 15564 - 15597
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  15564 gagtaaatagtcaatttcccccctgaaattgtaa 15597  T

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Target: scaffold0320; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 16348 - 16315
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  16348 gagtaaatagtcaatttcccccctgaaattgtaa 16315  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 1869 - 1836
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  1869 gagtaaatagtcaatttcccccctgaaattgtaa 1836  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 185597 - 185630
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgtaa 362  Q
    |||||||||||||||| |||||||||||||||||    
T  185597 gagtaaatagtcaatttcccccctgaaattgtaa 185630  T

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Target: scaffold0672 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 6418 - 6386
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgta 361  Q
    |||||||||||||||| ||||||||||||||||    
T  6418 gagtaaatagtcaatttcccccctgaaattgta 6386  T

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Target: scaffold0214 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 28774 - 28742
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgta 361  Q
    |||||||||||||||| ||||||||||||||||    
T  28774 gagtaaatagtcaatttcccccctgaaattgta 28742  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 13651 - 13619
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgta 361  Q
    |||||||||||||||| ||||||||||||||||    
T  13651 gagtaaatagtcaatttcccccctgaaattgta 13619  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 42612 - 42580
Alignment:
Q  329 gagtaaatagtcaattacccccctgaaattgta 361  Q
    |||||||||||||||| ||||||||||||||||    
T  42612 gagtaaatagtcaatttcccccctgaaattgta 42580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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