View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18235_high_1 (Length: 657)

Name: NF18235_high_1
Description: NF18235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18235_high_1
NF18235_high_1
[»] chr1 (35 HSPs)
chr1 (338-642)||(26970259-26970562)
chr1 (415-536)||(17695595-17695714)
chr1 (335-389)||(7079205-7079259)
chr1 (93-230)||(16162962-16163099)
chr1 (339-388)||(10182140-10182189)
chr1 (93-230)||(26176937-26177074)
chr1 (340-389)||(47682624-47682673)
chr1 (337-389)||(18422644-18422696)
chr1 (342-389)||(15752027-15752074)
chr1 (338-389)||(30254852-30254903)
chr1 (339-389)||(1547282-1547332)
chr1 (339-385)||(4150490-4150536)
chr1 (339-389)||(19899900-19899950)
chr1 (335-389)||(23999338-23999392)
chr1 (339-389)||(32267029-32267079)
chr1 (340-389)||(3309144-3309193)
chr1 (340-389)||(27227608-27227657)
chr1 (343-388)||(42663785-42663830)
chr1 (341-389)||(10922724-10922772)
chr1 (93-204)||(26229623-26229732)
chr1 (340-388)||(27118330-27118378)
chr1 (340-387)||(42721035-42721082)
chr1 (99-169)||(4112699-4112769)
chr1 (339-389)||(11742481-11742531)
chr1 (338-388)||(13876919-13876969)
chr1 (339-389)||(16415640-16415690)
chr1 (339-389)||(37619027-37619077)
chr1 (340-385)||(47279159-47279204)
chr1 (93-213)||(26173374-26173494)
chr1 (158-214)||(27413392-27413448)
chr1 (93-213)||(35772075-35772195)
chr1 (201-233)||(36827605-36827637)
chr1 (149-229)||(38668155-38668235)
chr1 (117-213)||(51460384-51460480)
chr1 (117-169)||(52961437-52961489)
[»] chr4 (41 HSPs)
chr4 (339-642)||(47073404-47073706)
chr4 (414-536)||(51204800-51204922)
chr4 (426-473)||(51204902-51204949)
chr4 (339-389)||(25701219-25701269)
chr4 (334-389)||(25184107-25184162)
chr4 (339-388)||(2704511-2704560)
chr4 (93-213)||(22231226-22231346)
chr4 (117-213)||(35819070-35819166)
chr4 (342-389)||(47253751-47253798)
chr4 (342-389)||(52516599-52516646)
chr4 (339-389)||(9139246-9139296)
chr4 (339-389)||(32912742-32912792)
chr4 (339-389)||(34361653-34361703)
chr4 (339-389)||(35021197-35021247)
chr4 (339-389)||(55478057-55478107)
chr4 (340-389)||(7703517-7703566)
chr4 (93-230)||(35796895-35797032)
chr4 (338-395)||(37663895-37663952)
chr4 (339-388)||(38812260-38812309)
chr4 (92-213)||(40717358-40717479)
chr4 (339-388)||(49878635-49878683)
chr4 (339-388)||(54995799-54995848)
chr4 (341-389)||(4597994-4598042)
chr4 (157-233)||(21750259-21750335)
chr4 (93-204)||(35788714-35788826)
chr4 (337-388)||(9743585-9743636)
chr4 (342-389)||(20097490-20097537)
chr4 (342-389)||(27396618-27396665)
chr4 (342-389)||(34948259-34948306)
chr4 (342-388)||(2266856-2266902)
chr4 (339-389)||(7152268-7152318)
chr4 (340-389)||(19440810-19440860)
chr4 (343-389)||(32592096-32592142)
chr4 (342-388)||(36493851-36493897)
chr4 (340-394)||(53337570-53337624)
chr4 (340-389)||(39397918-39397967)
chr4 (343-387)||(6864038-6864082)
chr4 (149-213)||(22445498-22445562)
chr4 (93-169)||(28245679-28245755)
chr4 (340-388)||(38811813-38811861)
chr4 (341-389)||(51204580-51204628)
[»] chr8 (42 HSPs)
chr8 (10-240)||(9397920-9398152)
chr8 (347-488)||(41190919-41191060)
chr8 (536-644)||(41190809-41190918)
chr8 (280-339)||(9398151-9398210)
chr8 (99-213)||(20301307-20301421)
chr8 (99-213)||(21087939-21088053)
chr8 (94-204)||(41790713-41790823)
chr8 (93-205)||(8084181-8084293)
chr8 (339-388)||(4108912-4108961)
chr8 (340-389)||(4133150-4133199)
chr8 (338-389)||(1150247-1150298)
chr8 (94-137)||(7289354-7289397)
chr8 (339-389)||(1204925-1204975)
chr8 (339-389)||(24823414-24823464)
chr8 (339-389)||(43643737-43643787)
chr8 (343-388)||(5018013-5018058)
chr8 (340-389)||(10555344-10555393)
chr8 (340-389)||(15009241-15009290)
chr8 (340-389)||(41362517-41362566)
chr8 (340-388)||(6098661-6098709)
chr8 (93-213)||(11232347-11232467)
chr8 (341-388)||(23176763-23176811)
chr8 (340-388)||(28220955-28221003)
chr8 (337-389)||(30654725-30654777)
chr8 (349-389)||(37970661-37970701)
chr8 (342-389)||(465843-465890)
chr8 (342-385)||(6446709-6446752)
chr8 (342-389)||(7891090-7891137)
chr8 (337-388)||(38110350-38110401)
chr8 (179-233)||(28212874-28212928)
chr8 (342-388)||(35735984-35736030)
chr8 (339-389)||(38643976-38644026)
chr8 (340-389)||(5300088-5300137)
chr8 (97-158)||(8466645-8466706)
chr8 (340-389)||(13307622-13307671)
chr8 (356-389)||(23854573-23854606)
chr8 (93-169)||(18004247-18004323)
chr8 (93-169)||(20094713-20094789)
chr8 (117-213)||(24532363-24532459)
chr8 (97-204)||(26208170-26208278)
chr8 (93-169)||(31197704-31197780)
chr8 (337-389)||(34952173-34952225)
[»] chr2 (42 HSPs)
chr2 (410-536)||(22963617-22963742)
chr2 (557-642)||(1354523-1354608)
chr2 (561-631)||(1361420-1361490)
chr2 (410-484)||(22997786-22997860)
chr2 (93-169)||(16533402-16533478)
chr2 (337-388)||(41643869-41643920)
chr2 (93-213)||(14466328-14466448)
chr2 (93-213)||(16419313-16419433)
chr2 (429-473)||(22997744-22997788)
chr2 (338-389)||(17071891-17071942)
chr2 (338-389)||(19424782-19424833)
chr2 (332-386)||(5881526-5881580)
chr2 (338-388)||(17054251-17054301)
chr2 (428-470)||(22963724-22963766)
chr2 (99-213)||(36352083-36352197)
chr2 (336-389)||(4264231-4264284)
chr2 (339-388)||(19093412-19093461)
chr2 (340-389)||(26357577-26357626)
chr2 (339-388)||(34441921-34441970)
chr2 (340-389)||(41465509-41465558)
chr2 (338-387)||(43446463-43446512)
chr2 (93-213)||(2029815-2029935)
chr2 (340-388)||(18514771-18514819)
chr2 (93-137)||(31001901-31001945)
chr2 (340-388)||(31861895-31861943)
chr2 (93-169)||(34893515-34893591)
chr2 (341-388)||(42005390-42005437)
chr2 (339-389)||(4166921-4166971)
chr2 (339-389)||(18494422-18494472)
chr2 (339-389)||(39167517-39167567)
chr2 (93-203)||(40149154-40149264)
chr2 (336-389)||(11366535-11366588)
chr2 (340-389)||(19313852-19313901)
chr2 (339-388)||(29242293-29242342)
chr2 (340-389)||(33551140-33551189)
chr2 (129-213)||(93308-93392)
chr2 (338-382)||(7007051-7007095)
chr2 (341-389)||(13711465-13711513)
chr2 (117-213)||(15124725-15124821)
chr2 (340-388)||(22963400-22963448)
chr2 (340-388)||(22998029-22998077)
chr2 (93-213)||(40379362-40379482)
[»] chr5 (39 HSPs)
chr5 (428-536)||(10053580-10053687)
chr5 (423-528)||(21266368-21266471)
chr5 (93-213)||(18333617-18333737)
chr5 (339-388)||(5112440-5112489)
chr5 (427-473)||(10053668-10053714)
chr5 (339-388)||(12910349-12910398)
chr5 (339-388)||(35826610-35826659)
chr5 (339-389)||(8742013-8742063)
chr5 (339-389)||(19119858-19119908)
chr5 (340-389)||(15724490-15724539)
chr5 (339-388)||(22616493-22616542)
chr5 (93-213)||(24346654-24346775)
chr5 (340-389)||(26317810-26317859)
chr5 (337-389)||(1429271-1429323)
chr5 (337-389)||(9200230-9200282)
chr5 (93-213)||(9368641-9368761)
chr5 (337-389)||(35933899-35933951)
chr5 (336-388)||(36055874-36055926)
chr5 (346-389)||(5748434-5748477)
chr5 (338-389)||(12164915-12164966)
chr5 (338-389)||(13380493-13380544)
chr5 (118-213)||(15480368-15480463)
chr5 (118-217)||(17352612-17352710)
chr5 (340-389)||(16004502-16004552)
chr5 (94-204)||(17150387-17150497)
chr5 (339-389)||(22974208-22974258)
chr5 (338-388)||(27579037-27579087)
chr5 (340-389)||(7693230-7693279)
chr5 (427-468)||(21266460-21266501)
chr5 (93-213)||(24270023-24270143)
chr5 (340-389)||(40133385-40133434)
chr5 (93-213)||(41666910-41667031)
chr5 (341-389)||(22980794-22980842)
chr5 (339-388)||(24886101-24886152)
chr5 (93-213)||(25258219-25258339)
chr5 (93-213)||(25322009-25322129)
chr5 (341-389)||(31705737-31705785)
chr5 (125-213)||(32908902-32908990)
chr5 (336-388)||(39572815-39572867)
[»] chr7 (32 HSPs)
chr7 (332-385)||(241024-241077)
chr7 (93-214)||(36277144-36277265)
chr7 (339-395)||(18797303-18797359)
chr7 (93-213)||(31485577-31485697)
chr7 (340-388)||(31520861-31520909)
chr7 (93-213)||(33834237-33834357)
chr7 (118-214)||(36993251-36993347)
chr7 (340-388)||(37346997-37347045)
chr7 (339-389)||(17842723-17842773)
chr7 (339-389)||(32821190-32821240)
chr7 (116-204)||(26239856-26239945)
chr7 (340-389)||(37109847-37109896)
chr7 (336-389)||(43686012-43686065)
chr7 (341-389)||(24211717-24211765)
chr7 (93-213)||(25620182-25620302)
chr7 (117-213)||(28080710-28080806)
chr7 (341-385)||(48928704-48928748)
chr7 (93-204)||(1596648-1596759)
chr7 (118-229)||(21821836-21821947)
chr7 (342-389)||(25691682-25691729)
chr7 (342-389)||(27421516-27421563)
chr7 (339-389)||(9355963-9356013)
chr7 (93-203)||(21861350-21861460)
chr7 (335-389)||(21991606-21991660)
chr7 (340-389)||(5657618-5657667)
chr7 (340-388)||(4582894-4582942)
chr7 (340-388)||(4902340-4902388)
chr7 (340-380)||(10359360-10359400)
chr7 (174-230)||(21311395-21311451)
chr7 (340-388)||(23402371-23402419)
chr7 (339-387)||(31794260-31794308)
chr7 (93-137)||(40746185-40746229)
[»] chr6 (13 HSPs)
chr6 (339-389)||(4318958-4319008)
chr6 (340-390)||(24662188-24662238)
chr6 (125-213)||(6542893-6542981)
chr6 (338-389)||(7055350-7055401)
chr6 (339-389)||(8513232-8513282)
chr6 (93-213)||(12330097-12330217)
chr6 (93-213)||(13353247-13353367)
chr6 (93-213)||(33796372-33796492)
chr6 (338-389)||(3880074-3880125)
chr6 (94-133)||(27993560-27993599)
chr6 (342-389)||(30353493-30353540)
chr6 (339-389)||(5627390-5627440)
chr6 (339-388)||(19631748-19631797)
[»] chr3 (28 HSPs)
chr3 (339-389)||(21193596-21193646)
chr3 (339-389)||(35844316-35844366)
chr3 (155-204)||(29575870-29575919)
chr3 (340-389)||(51213117-51213166)
chr3 (93-169)||(19954370-19954446)
chr3 (337-389)||(40552395-40552447)
chr3 (93-213)||(45828065-45828185)
chr3 (410-473)||(42204670-42204733)
chr3 (343-388)||(38392628-38392673)
chr3 (339-388)||(40640634-40640683)
chr3 (339-388)||(42665541-42665590)
chr3 (331-388)||(49359628-49359685)
chr3 (341-389)||(11835742-11835790)
chr3 (337-389)||(26941396-26941448)
chr3 (338-389)||(3655338-3655389)
chr3 (342-389)||(46297898-46297945)
chr3 (338-388)||(7327620-7327670)
chr3 (91-137)||(21888527-21888573)
chr3 (339-389)||(48354931-48354981)
chr3 (342-388)||(53818509-53818555)
chr3 (343-388)||(23165838-23165883)
chr3 (340-389)||(45174494-45174543)
chr3 (336-388)||(11466811-11466863)
chr3 (93-213)||(20303303-20303423)
chr3 (340-388)||(20373433-20373481)
chr3 (341-389)||(29163839-29163887)
chr3 (342-378)||(43976032-43976068)
chr3 (340-388)||(47930666-47930714)
[»] scaffold0692 (1 HSPs)
scaffold0692 (93-204)||(5672-5783)
[»] scaffold0092 (1 HSPs)
scaffold0092 (99-213)||(5701-5815)
[»] scaffold0009 (2 HSPs)
scaffold0009 (339-389)||(100820-100870)
scaffold0009 (338-389)||(42346-42397)
[»] scaffold0519 (1 HSPs)
scaffold0519 (93-213)||(1962-2082)
[»] scaffold0002 (2 HSPs)
scaffold0002 (338-389)||(132-183)
scaffold0002 (339-389)||(408705-408755)
[»] scaffold0129 (1 HSPs)
scaffold0129 (93-213)||(14349-14469)
[»] scaffold0024 (1 HSPs)
scaffold0024 (173-213)||(89551-89591)


Alignment Details
Target: chr1 (Bit Score: 293; Significance: 1e-164; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 338 - 642
Target Start/End: Original strand, 26970259 - 26970562
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaactctaaccaatcattgagcatatactgtcttggttaatcaaaattcatc 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26970259 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaactctaaccaatcattgagcatatactgtcttgattaatcaaaattcatc 26970358  T
Q  438 ttctccaaaattcacattctcgaactctaaaaccgtttctctccaaaattccatctgcttaatcaaatctctttctctccaaaatttatcttctccaaat 537  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970359 ttctccaaaattcacattctcgaactctaaaaccgtttctctccaaaattc-atctgcttaatcaaatctctttctctccaaaatttatcttctccaaat 26970457  T
Q  538 tatgctgtaattctgtatgcatatgttgcaagctggtgttatgctgtaatgaacagaagctatgttgaggcttttagctattggtgctaaccaaacagta 637  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970458 tatgctgtaattctgtatgcatatgttgcaagctggtgttatgctgtaatgaacagaagctatgttgaggcttttagctattggtgctaaccaaacagta 26970557  T
Q  638 ccata 642  Q
    |||||    
T  26970558 ccata 26970562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 536
Target Start/End: Complemental strand, 17695714 - 17695595
Alignment:
Q  415 gtcttggttaatcaaaattcatcttctccaaaattcacattctcgaactctaaaaccgtttctctccaaaattccatctgcttaatcaaatctctttctc 514  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||| |||| |||||||||||||  ||||||    
T  17695714 gtcttgcttaatcaaaattcatcttctccaaaattcacattctcg-accctaaaacagtttctctccaaaatt-catcagcttaatcaaatccttttctc 17695617  T
Q  515 tccaaaatttatcttctccaaa 536  Q
    ||||||||| || |||| ||||    
T  17695616 tccaaaattcattttcttcaaa 17695595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 7079259 - 7079205
Alignment:
Q  335 atataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7079259 atattggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 7079205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 16163099 - 16162962
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| |||||||||||||||   ||||||| ||||||||||||| || ||||   ||||| || ||||||| ||||  |||||| |||||||||||||     
T  16163099 gtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccattggatcttggagaggctttgatatcatcttaaaaattgtggttga 16163000  T
Q  193 atctaacacaacttcacaaaattggtttatgagatgag 230  Q
     |||||||||||  |||||||| |||||||||| ||||    
T  16162999 gtctaacacaaccccacaaaatcggtttatgaggtgag 16162962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 10182189 - 10182140
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  10182189 aggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaa 10182140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 26177074 - 26176937
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||||||||||||| ||||||  ||||||| ||| ||||||||| || |||| | ||||| || ||||||||||||  ||||||  |||| | ||||||    
T  26177074 gtggatataaatggtgggtggtccgatagcggaaatctgatagcaggtggcccaatggatcttggagaggctctgatatcatcttagaaatcgcggttgg 26176975  T
Q  193 atctaacacaacttcacaaaattggtttatgagatgag 230  Q
      ||||||||||  |||||||  ||||| |||| ||||    
T  26176974 gcctaacacaaccccacaaaaccggtttttgaggtgag 26176937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 47682673 - 47682624
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  47682673 ggaaaattttatggtgaagtcatgagagtgacttttttggtgaagttaac 47682624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 18422644 - 18422696
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||| |||||| ||||||| | ||||||||||||||||||||||||    
T  18422644 ataggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaac 18422696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 389
Target Start/End: Original strand, 15752027 - 15752074
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaac 15752074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 30254852 - 30254903
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||||||||||    
T  30254852 taggaaaattctatggtgaagtcataataatgacttttttgatgaagttaac 30254903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 1547282 - 1547332
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  1547282 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaac 1547332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 4150536 - 4150490
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagt 385  Q
    ||||||||| |||||| |||||||||||||||||||| |||||||||    
T  4150536 aggaaaattctatggtgaagtcatgataatgacttttctggtgaagt 4150490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 19899950 - 19899900
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||| ||||||| ||||||||||||||||||    
T  19899950 aggaaaattctatggtgaagtcataataatgatttttttggtgaagttaac 19899900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 23999338 - 23999392
Alignment:
Q  335 atataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||| ||||||||||||||| ||||||| | ||||| ||||||||||||||||||    
T  23999338 atattggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaac 23999392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 32267029 - 32267079
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||||||| ||||||| | |||||||||||| |||||||||||    
T  32267029 aggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaac 32267079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 3309144 - 3309193
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||||||||||||| |||||||||| |||| ||||||||    
T  3309144 ggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaac 3309193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 27227657 - 27227608
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||||| ||||| ||||||||||||||||||    
T  27227657 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaac 27227608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 42663830 - 42663785
Alignment:
Q  343 aaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||| |||||| |||||||||||||||||||||| ||||||||||    
T  42663830 aaattctatggtgaagtcatgataatgacttttttagtgaagttaa 42663785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 10922724 - 10922772
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||||| || |||||| ||||| ||||||||||||||||||    
T  10922724 gaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaac 10922772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 26229732 - 26229623
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| ||||  |||||||||||| ||||||| ||||| || | | ||||| || |||| ||||||||  |||||  ||||| |||||||    
T  26229732 gtggacataaatggtgggtgacttgatagcgaaatcctgataacaagtggctcaatggatcatggagagactctgatgctatctt--aaattttggttgg 26229635  T
Q  193 atctaacacaac 204  Q
    | ||||||||||    
T  26229634 acctaacacaac 26229623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 27118330 - 27118378
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||||||| ||||||||||| ||||||||||||| | |||||||    
T  27118330 ggaaaattttatgataaagtcatgaaaatgacttttttgataaagttaa 27118378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 387
Target Start/End: Original strand, 42721035 - 42721082
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagtta 387  Q
    |||||||| |||||| ||||||||| ||||| ||||||||||||||||    
T  42721035 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagtta 42721082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 4112699 - 4112769
Alignment:
Q  99 ataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgat 169  Q
    ||||||||| ||||||| ||||||| ||||||||||||| || | || | ||||| || ||||||||||||    
T  4112699 ataaatggtgggtggttcgatagcggaaacctgatagcaggtggtccaatggatcttggagaggctctgat 4112769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 11742531 - 11742481
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||| || |||| |||| |||||||||| |||||||||||||    
T  11742531 aggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaac 11742481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 13876969 - 13876919
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||| |||||| |||| |||| |||||||||| ||||||||||||    
T  13876969 taggaaaattctatggtgaagttatgaaaatgacttttatggtgaagttaa 13876919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 16415640 - 16415690
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| || ||| ||||||||| |||||||||| |||||||||||||    
T  16415640 aggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaac 16415690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 37619077 - 37619027
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| |||| || | ||||||||||||||||||||||||    
T  37619077 aggaaaattctatggtgaagttataagaatgacttttttggtgaagttaac 37619027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 47279159 - 47279204
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagt 385  Q
    |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  47279159 ggaaaaatctatggtgaagtcatgagaatgacttttttggtgaagt 47279204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 26173374 - 26173494
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| || |||  ||||||| ||||||||||||| || | |||| ||||   ||||||||||||||  ||| ||  |||  ||||||||    
T  26173374 gtggacataaatggtggggggtccgatagcggaaacctgatagcaggtggtccgatggatatcgaagaggctctgatatcattttagaaagggtggttgg 26173473  T
Q  193 atctaacacaacttcacaaaa 213  Q
    | ||||||||||  |||||||    
T  26173474 acctaacacaaccccacaaaa 26173494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 27413448 - 27413392
Alignment:
Q  158 agaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaat 214  Q
    ||||||||||||  ||||||  |||| ||||||||| |||||||||| |||||||||    
T  27413448 agaggctctgatatcatcttagaaatcgtggttggacctaacacaacctcacaaaat 27413392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 35772195 - 35772075
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||||||| |||||||||||||  | |||| | ||||| |||  ||||||||||  ||||||  |||| ||||||||    
T  35772195 gtggacataaatggtgggtggcccgatagcggaaacctgatagcagatggcccaatggatcttgagaaggctctgataccatcttagaaatcgtggttgg 35772096  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  35772095 gcctaacacaaccccacaaaa 35772075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 36827605 - 36827637
Alignment:
Q  201 caacttcacaaaattggtttatgagatgagaat 233  Q
    ||||||||||||||||| |||||||||||||||    
T  36827605 caacttcacaaaattggcttatgagatgagaat 36827637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 38668235 - 38668155
Alignment:
Q  149 ggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaattggtttatgagatga 229  Q
    ||||| || ||||||||||||  ||||||  |||||||| ||||  ||||||||||  ||||||||||| || ||||||||    
T  38668235 ggatcatggagaggctctgataccatcttagaaattgtgattgggcctaacacaaccccacaaaattggcttgtgagatga 38668155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 51460384 - 51460480
Alignment:
Q  117 gatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    ||||||| ||||||||||||| || |||| | ||||| || ||||||||||||  ||| ||  ||||| |||||||  ||||||||||  |||||||    
T  51460384 gatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatatcattttagaaattatggttgggcctaacacaaccccacaaaa 51460480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 52961489 - 52961437
Alignment:
Q  117 gatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgat 169  Q
    ||||||| ||||||||||||| || |||| | ||||| |||||||||||||||    
T  52961489 gatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgat 52961437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 292; Significance: 1e-163; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 339 - 642
Target Start/End: Complemental strand, 47073706 - 47073404
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaactctaaccaatcattgagcatatactgtcttggttaatcaaaattcatct 438  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47073706 aggaaaattctatggtaaagtcatgataatgacttttttggtgaagttaactctaaccaatcattgagcatatactgtcttggttaatcaaaattcatct 47073607  T
Q  439 tctccaaaattcacattctcgaactctaaaaccgtttctctccaaaattccatctgcttaatcaaatctctttctctccaaaatttatcttctccaaatt 538  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47073606 tctccaaaattcacattctcgaactctaaaaccgtttctctccaaaattc-atctgcttaatcaaatctctttctctccaaaatttatcttctccaaatt 47073508  T
Q  539 atgctgtaattctgtatgcatatgttgcaagctggtgttatgctgtaatgaacagaagctatgttgaggcttttagctattggtgctaaccaaacagtac 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47073507 atgctgtaattctgtatgcatatgttgcaagctggtgttatgctgtaatgaacagaagctatgttgaggcttttagctattggtgctaaccaaacagtac 47073408  T
Q  639 cata 642  Q
    ||||    
T  47073407 cata 47073404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 414 - 536
Target Start/End: Original strand, 51204800 - 51204922
Alignment:
Q  414 tgtcttggttaatcaaaattcatcttctccaaaattcacattctcgaactctaaaaccgtttctctccaaaattccatctgcttaatcaaatctc-tttc 512  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||| | ||||    
T  51204800 tgtcttgcttaatcaaaattcatcttctccaaaattcacattctcgaaccctaaaaccttttctctccaaaatt-catctgcttaatcaaatcccttttc 51204898  T
Q  513 tctccaaaatttatcttctccaaa 536  Q
    ||| ||||||| ||||||||||||    
T  51204899 tcttcaaaattcatcttctccaaa 51204922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 426 - 473
Target Start/End: Original strand, 51204902 - 51204949
Alignment:
Q  426 tcaaaattcatcttctccaaaattcacattctcgaactctaaaaccgt 473  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51204902 tcaaaattcatcttctccaaaattcacattctcgaaccctaaaaccgt 51204949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 25701269 - 25701219
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  25701269 aggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaac 25701219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 25184107 - 25184162
Alignment:
Q  334 tatataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||    
T  25184107 tatataggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaac 25184162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 2704511 - 2704560
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  2704511 aggaaaattttatggtgaagtcatgaaaatgacttttctggtgaagttaa 2704560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 22231226 - 22231346
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| |||||||||||||||   ||||||| ||||||||||||| || |||| | ||||  || ||||||||||||  ||||||  |||| ||||||||    
T  22231226 gtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatggattttggagaggctctgataccatcttagaaatcgtggttgg 22231325  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  22231326 gcctaacacaaccccacaaaa 22231346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 35819070 - 35819166
Alignment:
Q  117 gatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    ||||||| ||||||||||||| || |||| | ||||| |  |||| |||||||| |||||| ||||| ||||||||  |||||||||| ||||||||    
T  35819070 gatagcggaaacctgatagcaggtggcccaatggatcttagagagactctgatgccatcttaaaaatcgtggttgggcctaacacaacctcacaaaa 35819166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 389
Target Start/End: Original strand, 47253751 - 47253798
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaac 47253798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 389
Target Start/End: Original strand, 52516599 - 52516646
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  52516599 aaaattttatggtgaagtcatgagaatgacttttatggtgaagttaac 52516646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 9139246 - 9139296
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| | ||||||||||||||||||||||    
T  9139246 aggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaac 9139296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 32912792 - 32912742
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||| | ||||||||||||||||||||||||    
T  32912792 aggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaac 32912742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 34361703 - 34361653
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||| | ||||||||||||||||||||||||    
T  34361703 aggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaac 34361653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 35021247 - 35021197
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  35021247 aggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaac 35021197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 55478107 - 55478057
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| ||||| ||||||||||||||||||    
T  55478107 aggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaac 55478057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 7703517 - 7703566
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||| ||||||||||| |||||||||| |||||||||||||    
T  7703517 ggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaac 7703566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 35796895 - 35797032
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||||||| ||||||||||||| |||| || | |||||  ||||||||||||||  ||||||  |||| || |||||    
T  35796895 gtggagataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaatggatctcgaagaggctctgataccatcttagaaatggtagttgg 35796994  T
Q  193 atctaacacaacttcacaaaattggtttatgagatgag 230  Q
       |||||||||  ||||||| |||||| |||| ||||    
T  35796995 gcttaacacaaccccacaaaactggtttgtgaggtgag 35797032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 395
Target Start/End: Complemental strand, 37663952 - 37663895
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaactctaac 395  Q
    |||||||||| |||||| ||||||| | ||||||||||||| |||||||||| |||||    
T  37663952 taggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacactaac 37663895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 38812309 - 38812260
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| ||||||||| |||||||||| ||||||||||||    
T  38812309 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaa 38812260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 40717358 - 40717479
Alignment:
Q  92 tgtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttg 191  Q
    |||||| ||||||||| ||||||  ||||||| ||||||||| ||| || |||| | ||||  || ||||||||||||  ||||||  |||| |||||||    
T  40717358 tgtggacataaatggtgggtggtccgatagcggaaacctgatggcaggtggcccaatggatattggagaggctctgataccatcttagaaatcgtggttg 40717457  T
Q  192 gatctaacacaacttcacaaaa 213  Q
    |  ||||||||||  |||||||    
T  40717458 ggcctaacacaaccccacaaaa 40717479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 49878635 - 49878683
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  49878635 aggaaaattctatggtgaagt-atgataatgacttttttggtgaagttaa 49878683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 54995848 - 54995799
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| || | | |||||||||||||||||||||||||||||||||    
T  54995848 aggaaaattctacgatgaagtcatgataatgacttttttggtgaagttaa 54995799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 4597994 - 4598042
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||||| ||||||| | |||||||||| |||||||||||||    
T  4597994 gaaaattttatggtgaagtcattagaatgacttttctggtgaagttaac 4598042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 21750259 - 21750335
Alignment:
Q  157 aagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaattggtttatgagatgagaat 233  Q
    |||||||||||||  |||||| ||| | ||| |||| ||||||||||| |||||||| |||||| |||| |||||||    
T  21750259 aagaggctctgataccatcttaaaattcgtgattgggtctaacacaacctcacaaaactggtttgtgaggtgagaat 21750335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 35788826 - 35788714
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcct-gaagaggctctgatgacatcttcaaaattgtggttg 191  Q
    ||||| ||||||||| |||||  ||||| || ||||||||||||| || |||| ||||||| | || |||||||||||  ||||||  |||| |||||||    
T  35788826 gtggacataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttg 35788727  T
Q  192 gatctaacacaac 204  Q
    |  ||||||||||    
T  35788726 ggcctaacacaac 35788714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 388
Target Start/End: Original strand, 9743585 - 9743636
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||| |||||| |||||||||||||||  |||||||||||||||||| ||||    
T  9743585 atagtaaaattctatggtaaagtcatgtaaatgacttttttggtgaaattaa 9743636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 20097537 - 20097490
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  20097537 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaac 20097490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 389
Target Start/End: Original strand, 27396618 - 27396665
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  27396618 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaac 27396665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 34948306 - 34948259
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||| ||||||||| |||||||||| ||| |||||||||    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaac 34948259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 342 - 388
Target Start/End: Complemental strand, 2266902 - 2266856
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||| |||||| |||||||||||||||||||| | ||||||||||    
T  2266902 aaaattatatggtgaagtcatgataatgacttttctagtgaagttaa 2266856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 7152318 - 7152268
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| |||||||| ||||||||||| |||| ||||||||    
T  7152318 aggaaaattctatggtgaagtcatgctaatgacttttctggtaaagttaac 7152268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 19440860 - 19440810
Alignment:
Q  340 ggaaaattttatggt-aaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| |||||||||| ||||||||||||||||| ||||||    
T  19440860 ggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaac 19440810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 389
Target Start/End: Original strand, 32592096 - 32592142
Alignment:
Q  343 aaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| || ||||||| ||||||||||||||| ||||||||||    
T  32592096 aaattttattgtgaagtcattataatgacttttttgatgaagttaac 32592142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 342 - 388
Target Start/End: Complemental strand, 36493897 - 36493851
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||| |||||| ||||||||| ||| |||||||||||||||||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaa 36493851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 53337624 - 53337570
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaactctaa 394  Q
    |||||||| |||||||||||||||||||||| |||| || | |||||||| ||||    
T  53337624 ggaaaattctatggtaaagtcatgataatgatttttctgataaagttaacactaa 53337570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 39397918 - 39397967
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||| | |||||||||| |||||||||||||    
T  39397918 ggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaac 39397967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 6864038 - 6864082
Alignment:
Q  343 aaattttatggtaaagtcatgataatgacttttttggtgaagtta 387  Q
    ||||| |||||| | ||||||| ||||||||||||||||||||||    
T  6864038 aaattgtatggtgatgtcatgagaatgacttttttggtgaagtta 6864082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 22445562 - 22445498
Alignment:
Q  149 ggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    ||||| |||||||||||||||  ||||||  || |||||||||| |||||||||||  |||||||    
T  22445562 ggatcttgaagaggctctgataccatcttagaatttgtggttgggtctaacacaaccccacaaaa 22445498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 28245679 - 28245755
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgat 169  Q
    ||||| ||||||||| |||||   ||||||| ||||||||||||| || |||| | ||||| || ||||||||||||    
T  28245679 gtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgat 28245755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 38811813 - 38811861
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||| |||||| ||||||||| ||||| |||| ||||||||||||    
T  38811813 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaa 38811861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 51204580 - 51204628
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||| |||||| ||||||| | |||||||||| |||||||||||||    
T  51204580 gaaaattctatggtgaagtcataaaaatgacttttctggtgaagttaac 51204628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 193; Significance: 1e-104; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 9397920 - 9398152
Alignment:
Q  10 gtgagatgaaaatagccccacatgtaaacagttattcaggtcattgtgagactctaacatttggagggttgatataaatgggt-gtggatataaatggta 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  9397920 gtgagatgaaaatagccccacatgtaaacagttattcaggtcatcgtgagactctaacatttggagggttgatataaatggtttgtggatataaatggta 9398019  T
Q  109 ggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttca 208  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9398020 ggtggtttgatagcgaaaacctgataacaagtagcccgatggatcctaaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttca 9398119  T
Q  209 caaaattggtttatgagatgag-aataacctca 240  Q
    |||||| ||||||||||||||| ||||||||||    
T  9398120 caaaatcggtttatgagatgagaaataacctca 9398152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 347 - 488
Target Start/End: Complemental strand, 41191060 - 41190919
Alignment:
Q  347 tttatggtaaagtcatgataatgacttttttggtgaagttaactct--aaccaatcattgagcatatactgtcttggttaatcaaaattcatcttctcca 444  Q
    |||||||| |||| |||| |||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  41191060 tttatggtgaagttatgaaaatgacttttttggtgaagttaaccctgtaaccaatcattgagcata--ctgtcttgcttaatcaaaattcatcttctcca 41190963  T
Q  445 aaattcacattctcgaactctaaaaccgtttctctccaaaattc 488  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  41190962 aaattcacattctcgaaccctaaaaccgtttctctccaaaattc 41190919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 536 - 644
Target Start/End: Complemental strand, 41190918 - 41190809
Alignment:
Q  536 attatgctgtaattctgtatg-catatgttgcaagctggtgttatgctgtaatgaacagaagctatgttgaggcttttagctattggtgctaaccaaaca 634  Q
    |||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41190918 attatgttgtaattatgtatgtcatatgttccaagctggtgttatgctgtaatgaacagaagctatgttgaggcttttagctattggtgctaaccaaaca 41190819  T
Q  635 gtaccatatg 644  Q
    ||||||||||    
T  41190818 gtaccatatg 41190809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 9398151 - 9398210
Alignment:
Q  280 catttggaggagaatatacggtcttgatgtgggataactcctttgagttgtttatatata 339  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9398151 catttggaggagaatatacggtgttgatgtgggataactcctttgagttgtttatatata 9398210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 213
Target Start/End: Complemental strand, 20301421 - 20301307
Alignment:
Q  99 ataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaa 198  Q
    ||||||||| ||||||  ||||||| ||||||||||||| || |||| | ||||| |||||||||||||||  ||||||  |||| ||||||||  ||||    
T  20301421 ataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaa 20301322  T
Q  199 cacaacttcacaaaa 213  Q
    |||||| ||||||||    
T  20301321 cacaacctcacaaaa 20301307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 213
Target Start/End: Complemental strand, 21088053 - 21087939
Alignment:
Q  99 ataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaa 198  Q
    ||||||||| ||||||  ||||||| ||||||||||||| || |||| | ||||| |||||||||||||||  ||||||  |||| ||||||||  ||||    
T  21088053 ataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaa 21087954  T
Q  199 cacaacttcacaaaa 213  Q
    |||||| ||||||||    
T  21087953 cacaacctcacaaaa 21087939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 41790823 - 41790713
Alignment:
Q  94 tggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgga 193  Q
    |||| ||||||||| ||||| | ||||||| ||||||||||||| || |||| | ||||| |||||||||||||||  ||||||  |||| ||||||||     
T  41790823 tggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttggg 41790724  T
Q  194 tctaacacaac 204  Q
     ||||||||||    
T  41790723 cctaacacaac 41790713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 8084293 - 8084181
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||| |   |||||||||||||||||||| || |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  8084293 gtggacataaatggtgggtgatccaatagcgaaaacctgatagcatgtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 8084194  T
Q  193 atctaacacaact 205  Q
     ||||||||||||    
T  8084193 gtctaacacaact 8084181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 4108961 - 4108912
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  4108961 aggaaaattttatggtgaagtcatgaaaatgacttttttggtaaagttaa 4108912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 4133199 - 4133150
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  4133199 ggaaaattttatggtcaagtcatcagaatgacttttttggtgaagttaac 4133150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 1150298 - 1150247
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||| |||||| ||||||| | ||||||||||||||||||||||||    
T  1150298 taggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaac 1150247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 7289354 - 7289397
Alignment:
Q  94 tggatataaatggtaggtggtttgatagcgaaaacctgatagca 137  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  7289354 tggacataaatggtgggtggtttgatagcgaaaacctgatagca 7289397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 1204925 - 1204975
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||| ||| ||||||||| |||||||||| |||||||||||||    
T  1204925 aggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaac 1204975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 24823464 - 24823414
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||||||||    
T  24823464 aggaaaatactatggtaaagttatgagaatgacttttttggtgaagttaac 24823414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 43643787 - 43643737
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| ||||||| ||||||||||||||||    
T  43643787 aggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaac 43643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 5018013 - 5018058
Alignment:
Q  343 aaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||| |||||| |||||||||||||||||||||| ||||||||||    
T  5018013 aaattctatggtgaagtcatgataatgacttttttagtgaagttaa 5018058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 10555393 - 10555344
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| || ||| ||||||||| ||||||||||||||||||||||||    
T  10555393 ggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaac 10555344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 15009241 - 15009290
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||| | ||||||||||||||||||||||||    
T  15009241 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaac 15009290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 41362517 - 41362566
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| |||| |||| ||||||||||||||||||||||||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaac 41362566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 6098709 - 6098661
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||| |||||| ||||||||| ||| |||||||||||||||||||    
T  6098709 ggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaa 6098661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 11232347 - 11232467
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| ||||  | ||||||| |||||||||| || || |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  11232347 gtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 11232446  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  11232447 gcctaacacaaccccacaaaa 11232467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 388
Target Start/End: Complemental strand, 23176811 - 23176763
Alignment:
Q  341 gaaaattt-tatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  23176811 gaaaatttctatggtgaagtcatgaaaatgacttttttggtgaagttaa 23176763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 28221003 - 28220955
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  28221003 ggaaaattctatgataaagtcatgaaaatgacttttctggtgaagttaa 28220955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 30654777 - 30654725
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||||||||| ||||||| | | ||| ||||||||||||||||||    
T  30654777 ataggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaac 30654725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 37970701 - 37970661
Alignment:
Q  349 tatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  37970701 tatggtgaagtcatgagaatgacttttttggtgaagttaac 37970661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 389
Target Start/End: Original strand, 465843 - 465890
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||| ||||||| | |||||||||| |||||||||||||    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaac 465890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 6446752 - 6446709
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagt 385  Q
    |||||| |||||| |||||||||||||||||||| |||||||||    
T  6446752 aaaattctatggtgaagtcatgataatgacttttctggtgaagt 6446709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 7891137 - 7891090
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||| |||||| ||||||||| |||||||||||| |||||||||||    
T  7891137 aaaattctatggtgaagtcatgagaatgactttttttgtgaagttaac 7891090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 388
Target Start/End: Original strand, 38110350 - 38110401
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||||||||||| ||||||||| ||||| |||| || |||||||||    
T  38110350 ataggaaaattttatggtgaagtcatgaaaatgatttttctgatgaagttaa 38110401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 28212874 - 28212928
Alignment:
Q  179 aaaattgtggttggatctaacacaacttcacaaaattggtttatgagatgagaat 233  Q
    ||||| |||||||  | ||||||||||||| |||| |||||||||||||||||||    
T  28212874 aaaatcgtggttgagtttaacacaacttcataaaactggtttatgagatgagaat 28212928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 342 - 388
Target Start/End: Complemental strand, 35736030 - 35735984
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||| |||||| ||||||| | |||||||||||||||||||||||    
T  35736030 aaaattctatggtgaagtcattagaatgacttttttggtgaagttaa 35735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 38643976 - 38644026
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| || |||||| ||||||||||||||| ||||||||    
T  38643976 aggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaac 38644026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 5300137 - 5300088
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||||| ||||||||||||  ||||||||||    
T  5300137 ggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaac 5300088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 8466645 - 8466706
Alignment:
Q  97 atataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaa 158  Q
    ||||||||||| ||||| ||||||||| ||||||||||||| || |||| | ||||| ||||    
T  8466645 atataaatggtgggtggcttgatagcggaaacctgatagcaggtggcccaatggatcttgaa 8466706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 13307622 - 13307671
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||||| ||||| |||| |||||||||||||    
T  13307622 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaac 13307671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 389
Target Start/End: Complemental strand, 23854606 - 23854573
Alignment:
Q  356 aagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| ||||||||||||||||||||||||    
T  23854606 aagtcatgagaatgacttttttggtgaagttaac 23854573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 18004247 - 18004323
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgat 169  Q
    ||||| ||||||||| |||||   ||||||| ||||||||||||| || |||| | ||||| || ||||||||||||    
T  18004247 gtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgat 18004323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 20094713 - 20094789
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgat 169  Q
    ||||| ||||||||| |||||  |||||||||||||||||||| | || |||| | ||||| ||||||  |||||||    
T  20094713 gtggacataaatggtgggtggcctgatagcgaaaacctgataggaggtggcccaatggatcttgaagaaactctgat 20094789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 24532363 - 24532459
Alignment:
Q  117 gatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    ||||||| ||||||||||||| || |||| | ||||| ||||| |||||||||  ||||||  ||||  |||||||  ||||||||||  |||||||    
T  24532363 gatagcggaaacctgatagcaggtggcccaatggatcttgaaggggctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaa 24532459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 204
Target Start/End: Original strand, 26208170 - 26208278
Alignment:
Q  97 atataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcct-gaagaggctctgatgacatcttcaaaattgtggttggatc 195  Q
    ||||||||||| |||||   | ||| ||||||||||||||| || |||| ||||||| | ||  ||||||||||  ||||||  ||||||||| |||| |    
T  26208170 atataaatggtgggtggcccgttagggaaaacctgatagcaggtggcccaacggatcttagagaaggctctgataccatcttagaaattgtggatggacc 26208269  T
Q  196 taacacaac 204  Q
    |||||||||    
T  26208270 taacacaac 26208278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 31197780 - 31197704
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgat 169  Q
    ||||| ||||||||| ||||||  ||||||| ||||||||||||| || |||| | |||||  | ||||||||||||    
T  31197780 gtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctcggagaggctctgat 31197704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 34952225 - 34952173
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||| ||| |||||||||| | |||||||||| |||| ||||||||    
T  34952225 ataggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaac 34952173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 410 - 536
Target Start/End: Original strand, 22963617 - 22963742
Alignment:
Q  410 atactgtcttggttaatcaaaattcatcttctccaaaattcacattctcgaactctaaaaccgtttctctccaaaattccatctgcttaatcaaatctct 509  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| |||||||||||||||||||||    
T  22963617 atactgtcttgcttaatcaaaattcatcttctccaaaattcacattcttgaaccctaaaactgtttctctccaaaatt-catctgcttaatcaaatctct 22963715  T
Q  510 ttctctccaaaatttatcttctccaaa 536  Q
    ||||||  ||||||  |||||||||||    
T  22963716 ttctctaaaaaattcttcttctccaaa 22963742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 557 - 642
Target Start/End: Complemental strand, 1354608 - 1354523
Alignment:
Q  557 catatgttgcaagctggtgttatgctgtaatgaacagaagctatgttgaggcttttagctattggtgctaaccaaacagtaccata 642  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1354608 catatgttccaagctggtgttatgctgtaatgaacagaagctatgtttaggcttttagctattggtgctaaccaaacagtaccata 1354523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 561 - 631
Target Start/End: Complemental strand, 1361490 - 1361420
Alignment:
Q  561 tgttgcaagctggtgttatgctgtaatgaacagaagctatgttgaggcttttagctattggtgctaaccaa 631  Q
    |||| ||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  1361490 tgttccaagctggtgttatgttgtaatgagcagcagctatgttgaggcttttagctattggtgccaaccaa 1361420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 22997860 - 22997786
Alignment:
Q  410 atactgtcttggttaatcaaaattcatcttctccaaaattcacattctcgaactctaaaaccgtttctctccaaa 484  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||  |||||||||||||    
T  22997860 atactgtcttgcttaatcaaaattcatcttctccaaaactcacattcttgaaccctaaaattgtttctctccaaa 22997786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 16533478 - 16533402
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgat 169  Q
    ||||| ||||||||| |||||   ||||||||||||||||||||| ||||||| | ||||| |||||||||||||||    
T  16533478 gtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtagcccaatggatcttgaagaggctctgat 16533402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 388
Target Start/End: Original strand, 41643869 - 41643920
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||| |||||| |||||| |||||||||||||||||||||||||||||||||    
T  41643869 atagaaaaattctatggtgaagtcatgataatgacttttttggtgaagttaa 41643920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 14466328 - 14466448
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||||||| |||||||||| ||||| |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  14466328 gtggacataaatggtgggtggcccgatagcggaaacctgataacaagtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 14466427  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  14466428 gcctaacacaaccccacaaaa 14466448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 16419433 - 16419313
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| ||||| | ||||||| ||||||||||||| || |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  16419433 gtggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 16419334  T
Q  193 atctaacacaacttcacaaaa 213  Q
      |||| |||||  |||||||    
T  16419333 gcctaatacaaccccacaaaa 16419313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 429 - 473
Target Start/End: Complemental strand, 22997788 - 22997744
Alignment:
Q  429 aaattcatcttctccaaaattcacattctcgaactctaaaaccgt 473  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||    
T  22997788 aaattcttcttctccaaaattcacattctcgaaccctaaaaccgt 22997744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 17071942 - 17071891
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||| |||||| ||||||||  ||||||||||||||||||||||||    
T  17071942 taggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaac 17071891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 19424833 - 19424782
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||||||| ||||||||| |||| ||||| |||||||||||||    
T  19424833 taggaaaattttatggtgaagtcatgagaatggcttttctggtgaagttaac 19424782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 5881526 - 5881580
Alignment:
Q  332 tatatataggaaaattttatggtaaagtcatgataatgacttttttggtgaagtt 386  Q
    |||||||||||||||||||| || ||||||| | |||||||||| ||||||||||    
T  5881526 tatatataggaaaattttattgtgaagtcattaaaatgacttttctggtgaagtt 5881580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 17054301 - 17054251
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||| |||||| ||||||||  |||||||||||||||||||||||    
T  17054301 taggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaa 17054251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 470
Target Start/End: Original strand, 22963724 - 22963766
Alignment:
Q  428 aaaattcatcttctccaaaattcacattctcgaactctaaaac 470  Q
    ||||||| ||||||||||||||||||||||||||| |||||||    
T  22963724 aaaattcttcttctccaaaattcacattctcgaaccctaaaac 22963766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 213
Target Start/End: Original strand, 36352083 - 36352197
Alignment:
Q  99 ataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaa 198  Q
    ||||||||| |||||   |||| || |||||||||| || || |||||| ||||| ||||||| |||| ||  |||||| ||||||||||||| | ||||    
T  36352083 ataaatggtgggtggcccgataacggaaacctgataacaggtggcccgatggatcttgaagagactctaataccatcttaaaaattgtggttgaacctaa 36352182  T
Q  199 cacaacttcacaaaa 213  Q
    ||||||  |||||||    
T  36352183 cacaaccccacaaaa 36352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 4264284 - 4264231
Alignment:
Q  336 tataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||    
T  4264284 tataggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaac 4264231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 19093412 - 19093461
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||||||||| ||||||||| ||||| |||| ||||||||||||    
T  19093412 aggaaaattttatggtgaagtcatgagaatgatttttctggtgaagttaa 19093461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 26357577 - 26357626
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||||| ||||||||| |||||||||| || ||||||||||    
T  26357577 ggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaac 26357626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 34441970 - 34441921
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| ||||||||| ||||||||||||||| |||||||    
T  34441970 aggaaaattctatggtgaagtcatgaaaatgacttttttggtaaagttaa 34441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 41465509 - 41465558
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  41465509 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaac 41465558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 43446512 - 43446463
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagtta 387  Q
    |||||||||| |||||| ||||||||| ||||||||||| ||||||||||    
T  43446512 taggaaaattctatggtgaagtcatgagaatgactttttcggtgaagtta 43446463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 2029935 - 2029815
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| ||||||  ||||||| |||||| |||||| || |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  2029935 gtggacataaatggtgggtggtccgatagcggaaacctaatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 2029836  T
Q  193 atctaacacaacttcacaaaa 213  Q
      |||| |||||  |||||||    
T  2029835 gcctaaaacaaccccacaaaa 2029815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 18514819 - 18514771
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||||| || ||||||||| ||||||||||||| |||||||||    
T  18514819 ggaaaattttatagtgaagtcatgagaatgacttttttgatgaagttaa 18514771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 31001901 - 31001945
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagca 137  Q
    |||||||||||||||||||||  |||||||| |||||||||||||    
T  31001901 gtggatataaatggtaggtggcatgatagcggaaacctgatagca 31001945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 31861895 - 31861943
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||| |||||| |||| |||| |||||||||||||||||||||||    
T  31861895 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaa 31861943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 34893591 - 34893515
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgat 169  Q
    ||||| ||||||||| ||||||  ||||||||||||||||||| | || |||| | ||||| || ||||||||||||    
T  34893591 gtggacataaatggtgggtggtccgatagcgaaaacctgatagtaggtggcccaatggatcttggagaggctctgat 34893515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 388
Target Start/End: Original strand, 42005390 - 42005437
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||| |||||| ||||||||| ||||| |||||||||||||||||    
T  42005390 gaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaa 42005437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 4166921 - 4166971
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| |||||| || |||||||||| |||||||||||||    
T  4166921 aggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaac 4166971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 18494472 - 18494422
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| | |||| ||||||||| |||||||||| |||||||||||||    
T  18494472 aggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaac 18494422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 39167567 - 39167517
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||||||| |||||| || ||||| ||||||| ||||||||||    
T  39167567 aggaaaattttatggtgaagtcacgagaatgatttttttgatgaagttaac 39167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 40149154 - 40149264
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| |||||| || ||||||  ||||||  ||| ||||||||| ||  ||| | ||||| |||||||||||||||  ||||||  |||||||||||||    
T  40149154 gtggacataaatagtgggtggtccgatagctgaaatctgatagcaggtgacccaatggatcttgaagaggctctgataccatcttagaaattgtggttgg 40149253  T
Q  193 atctaacacaa 203  Q
      |||||||||    
T  40149254 gcctaacacaa 40149264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 11366588 - 11366535
Alignment:
Q  336 tataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||| |||||| || |||| | |||||||||||||||||| |||||    
T  11366588 tataggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaac 11366535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 19313852 - 19313901
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||| | |||||||||| |||||||||||||    
T  19313852 ggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaac 19313901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 29242342 - 29242293
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| ||||||||| ||||  |||||||||||||||||    
T  29242342 aggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaa 29242293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 33551189 - 33551140
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| || ||| ||||||||| |||||||||||| |||||||||||    
T  33551189 ggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaac 33551140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 93308 - 93392
Alignment:
Q  129 ctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    ||||||||| || |||| | ||||| || ||||||||||||  |||||| ||||| ||||||||  ||||||||||  |||||||    
T  93308 ctgatagcaggtggcccaatggatcttggagaggctctgataccatcttaaaaatcgtggttgggcctaacacaaccccacaaaa 93392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 382
Target Start/End: Complemental strand, 7007095 - 7007051
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtga 382  Q
    |||||||||| |||||| ||||||||| ||||| |||||||||||    
T  7007095 taggaaaattctatggtgaagtcatgagaatgatttttttggtga 7007051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 13711465 - 13711513
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||| |||||| ||||||| | |||||||||| |||||||||||||    
T  13711465 gaaaattctatggtgaagtcatcagaatgacttttctggtgaagttaac 13711513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 15124725 - 15124821
Alignment:
Q  117 gatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    |||| |||||||||||||||| || | || | ||||| || |||| |||||||  ||||||  |||| |||||||| |||||||||||  |||||||    
T  15124725 gataacgaaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaa 15124821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 22963400 - 22963448
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||||||||| ||||||| | |||||||||| |||| |||||||    
T  22963400 ggaaaattttatggtgaagtcataagaatgacttttctggtaaagttaa 22963448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 22998077 - 22998029
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||||||||| ||||||| | |||||||||| |||| |||||||    
T  22998077 ggaaaattttatggtgaagtcataagaatgacttttctggtaaagttaa 22998029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 40379362 - 40379482
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||||||||||||| |||||   ||||| | ||||||||||||| || |||  | ||||| || | ||||||||||  ||||||  |||| ||||||||    
T  40379362 gtggatataaatggtgggtggcccgatagaggaaacctgatagcaggtggcctaatggatcttggaaaggctctgataccatcttagaaatcgtggttgg 40379461  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  40379462 gcctaacacaaccccacaaaa 40379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 7e-26; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 428 - 536
Target Start/End: Original strand, 10053580 - 10053687
Alignment:
Q  428 aaaattcatcttctccaaaattcacattctcgaactctaaaaccgtttctctccaaaattccatctgcttaatcaaatctctttctctccaaaatttatc 527  Q
    |||||||||| ||||||||||||| |||||| ||| ||||||  |||||||||||||||| |||| |||||||||||||  ||||||||||||||| |||    
T  10053580 aaaattcatcctctccaaaattcatattctcaaacactaaaattgtttctctccaaaatt-catccgcttaatcaaatcattttctctccaaaattcatc 10053678  T
Q  528 ttctccaaa 536  Q
    |||||||||    
T  10053679 ttctccaaa 10053687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 423 - 528
Target Start/End: Original strand, 21266368 - 21266471
Alignment:
Q  423 taatcaaaattcatcttctccaaaattcacattctcgaactctaaaaccgtttctctccaaaattccatctgcttaatcaaatctctttctctccaaaat 522  Q
    ||||||||||||||||| |||||||||||||| ||| |||  |||||  ||||||||||||| ||  ||| |||||||||||||||||||||||||||||    
T  21266368 taatcaaaattcatcttttccaaaattcacatcctcaaaccttaaaattgtttctctccaaattt--atccgcttaatcaaatctctttctctccaaaat 21266465  T
Q  523 ttatct 528  Q
    | ||||    
T  21266466 tcatct 21266471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 18333617 - 18333737
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||||||||||||||||||||| || |||||| ||||| |||||||||||||||  ||||||  || | ||||||||    
T  18333617 gtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatggatcttgaagaggctctgataccatcttagaattcgtggttgg 18333716  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  18333717 gcctaacacaaccccacaaaa 18333737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 5112489 - 5112440
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  5112489 aggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaa 5112440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 427 - 473
Target Start/End: Original strand, 10053668 - 10053714
Alignment:
Q  427 caaaattcatcttctccaaaattcacattctcgaactctaaaaccgt 473  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  10053668 caaaattcatcttctccaaaattcacattcttgaaccctaaaaccgt 10053714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 12910349 - 12910398
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  12910349 aggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaa 12910398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 35826659 - 35826610
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  35826659 aggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaa 35826610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 8742063 - 8742013
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  8742063 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaac 8742013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 19119858 - 19119908
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  19119858 aggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaac 19119908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 15724490 - 15724539
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| |||| |||| ||||||||||||||||||||||||    
T  15724490 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaac 15724539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 22616493 - 22616542
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| ||||||||| |||||||||| ||||||||||||    
T  22616493 aggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaa 22616542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 24346654 - 24346775
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaag-aggctctgatgacatcttcaaaattgtggttg 191  Q
    ||||| ||||||||| |||||   |||| || ||||||||||||| || |||| | ||||| || || ||||||||||  |||||| ||||| |||||||    
T  24346654 gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtggttg 24346753  T
Q  192 gatctaacacaacttcacaaaa 213  Q
    | |||||||||||  |||||||    
T  24346754 ggtctaacacaaccccacaaaa 24346775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 26317859 - 26317810
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||| | ||||||||| ||||||||||||||||||||||||    
T  26317859 ggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaac 26317810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 1429323 - 1429271
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| | |||||| ||||||||| ||||||| ||||||||||||||||    
T  1429323 ataggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaac 1429271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 9200230 - 9200282
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||||||||| ||||||| | ||| |||||| |||||||||||||    
T  9200230 ataggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaac 9200282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 9368761 - 9368641
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||| ||||| ||||||   |||||| ||||||||||||| || |||| | ||||| |||||||||||||||  || |||  ||||| |||||||    
T  9368761 gtggacatacatggtgggtggtccaatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccaccttagaaattatggttgg 9368662  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  9368661 gcctaacacaaccccacaaaa 9368641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 35933899 - 35933951
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||| |||||| ||||||||| ||||| ||||||| ||||||||||    
T  35933899 ataggaaaattgtatggtgaagtcatgagaatgatttttttgatgaagttaac 35933951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 36055926 - 36055874
Alignment:
Q  336 tataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||||||||||||| | ||||||| |||||||||| | ||||||||||    
T  36055926 tataggaaaattttatggtgatgtcatgagaatgacttttcttgtgaagttaa 36055874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 389
Target Start/End: Original strand, 5748434 - 5748477
Alignment:
Q  346 ttttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||    
T  5748434 ttttatgatgaagtcatgaaaatgacttttttggtgaagttaac 5748477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 12164966 - 12164915
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||| ||| ||||||||| ||||||||||||| | ||||||||    
T  12164966 taggaaaattttacggtgaagtcatgagaatgacttttttgctaaagttaac 12164915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 13380493 - 13380544
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||| |||||||||||| ||||||||| |||||||||| | |||||||||||    
T  13380493 taggcaaattttatggtgaagtcatgagaatgacttttctagtgaagttaac 13380544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 15480463 - 15480368
Alignment:
Q  118 atagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    |||||| ||||||||||||| || |||| | ||||| |||||||||||||||  ||||||  |||| ||||||||  |||||| |||  |||||||    
T  15480463 atagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacagaaccccacaaaa 15480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 17352612 - 17352710
Alignment:
Q  118 atagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaattgg 217  Q
    |||||| |||||||||||||||| || | | ||||| |||||||||||||||  ||||||  |||| ||||||||| |||||| |||  | |||||||||    
T  17352612 atagcggaaacctgatagcaagtggctcaa-ggatcttgaagaggctctgataccatcttagaaatggtggttggacctaacataaccccgcaaaattgg 17352710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 16004552 - 16004502
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataa-tgacttttttggtgaagttaac 389  Q
    |||||||| |||||||||||||||| || |||||||| |||||||||||||    
T  16004552 ggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaac 16004502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 17150387 - 17150497
Alignment:
Q  94 tggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgga 193  Q
    |||| ||||||||| |||||   ||||||| ||||||||||| | || |||| | ||||| |||||||||||||||  |||||| ||||| || ||||      
T  17150387 tggacataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaatggatcttgaagaggctctgataccatcttaaaaatcgtagttgag 17150486  T
Q  194 tctaacacaac 204  Q
     ||||||||||    
T  17150487 cctaacacaac 17150497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 22974258 - 22974208
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| |||| |||| ||||| ||||||||||||||||||    
T  22974258 aggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaac 22974208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 27579037 - 27579087
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||||||||||| || || ||| || ||||||||||||||||||||    
T  27579037 taggaaaattttatggtgaaatcgtgaaaacgacttttttggtgaagttaa 27579087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 7693230 - 7693279
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||| | |||||||||| |||||||||||||    
T  7693230 ggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaac 7693279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 468
Target Start/End: Original strand, 21266460 - 21266501
Alignment:
Q  427 caaaattcatcttctccaaaattcacattctcgaactctaaa 468  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  21266460 caaaattcatctactacaaaattcacattctcgaaccctaaa 21266501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 24270023 - 24270143
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaag-aggctctgatgacatcttcaaaattgtggttg 191  Q
    ||||| ||||||||| |||||   |||| || ||||||||||||| || |||| | ||||| || || ||||||||||  |||||| ||||| |||||||    
T  24270023 gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtggttg 24270122  T
Q  192 gatctaacacaacttcacaaaa 213  Q
    | |||||||||||  |||||||    
T  24270123 g-tctaacacaaccccacaaaa 24270143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 40133385 - 40133434
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| |||||| || |||||||||| |||||||||||||    
T  40133385 ggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaac 40133434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 41666910 - 41667031
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcct-gaagaggctctgatgacatcttcaaaattgtggttg 191  Q
    ||||| ||||||||| |||||   |||| || ||||||||||||| || |||| ||||||| | || |||||||||||  ||||||  |||| |||||||    
T  41666910 gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttg 41667009  T
Q  192 gatctaacacaacttcacaaaa 213  Q
    |  ||||||||||  |||||||    
T  41667010 ggcctaacacaaccccacaaaa 41667031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 22980794 - 22980842
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||| | |||| |||| |||||||||| |||||||||||||    
T  22980794 gaaaattttatgatgaagttatgagaatgacttttctggtgaagttaac 22980842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 24886101 - 24886152
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgac--ttttttggtgaagttaa 388  Q
    |||||||||||||||| || |||||| ||||||  |||||||||||||||||    
T  24886101 aggaaaattttatggtgaaatcatgagaatgacttttttttggtgaagttaa 24886152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 25258219 - 25258339
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| |||||| || ||||||  ||||||| ||||||||||||| || |||| | ||||| || ||| ||||||||  ||||||  |||| |||||||     
T  25258219 gtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcgtggttga 25258318  T
Q  193 atctaacacaacttcacaaaa 213  Q
     | |||||||||  |||||||    
T  25258319 gtttaacacaaccccacaaaa 25258339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 25322009 - 25322129
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| |||||| || ||||||  ||||||| ||||||||||||| || |||| | ||||| || ||| ||||||||  ||||||  |||| |||||||     
T  25322009 gtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcgtggttga 25322108  T
Q  193 atctaacacaacttcacaaaa 213  Q
     | |||||||||  |||||||    
T  25322109 gtttaacacaaccccacaaaa 25322129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 341 - 389
Target Start/End: Complemental strand, 31705785 - 31705737
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||| |||||| ||||||| | ||||| ||||||||||||||||||    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaac 31705737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 125 - 213
Target Start/End: Original strand, 32908902 - 32908990
Alignment:
Q  125 aaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    |||||||||||||  | |||| | ||||| |||||||||||| ||  ||||||  ||||||||||||  |||||||||||  |||||||    
T  32908902 aaacctgatagcagatggcccaatggatcttgaagaggctctaatatcatcttagaaattgtggttgagtctaacacaaccccacaaaa 32908990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 39572815 - 39572867
Alignment:
Q  336 tataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||||| |||||| ||||||||| |||||||||| | || |||||||    
T  39572815 tataggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaa 39572867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 241077 - 241024
Alignment:
Q  332 tatatataggaaaattttatggtaaagtcatgataatgacttttttggtgaagt 385  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  241077 tatatataggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagt 241024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 36277144 - 36277265
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| ||||||  ||||||| ||||||||||| | || |||| | ||||| || |||||||||||| |||||||  |||| ||||||||    
T  36277144 gtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtggcccaatggatcttggagaggctctgataacatcttagaaatcgtggttgg 36277243  T
Q  193 atctaacacaacttcacaaaat 214  Q
      ||||||||||  ||||||||    
T  36277244 gactaacacaaccccacaaaat 36277265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 395
Target Start/End: Original strand, 18797303 - 18797359
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaactctaac 395  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  18797303 aggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactaac 18797359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 31485577 - 31485697
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||||||||||||| |||||   ||||| ||||||||||||| | || |||| | ||||| || || |||||| ||  ||||||  ||||||||||| |    
T  31485577 gtggatataaatggtgggtggcccgatagtgaaaacctgatagtaggtggcccaatggatcttgtagcggctcttataccatcttagaaattgtggttag 31485676  T
Q  193 atctaacacaacttcacaaaa 213  Q
      |||||||||||||||||||    
T  31485677 gcctaacacaacttcacaaaa 31485697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 31520909 - 31520861
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  31520909 ggaaaattttatgatgaagtcatgaaaatgacttttttggtgaagttaa 31520861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 33834357 - 33834237
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||||| ||||||||||||||| || |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  33834357 gtggacataaatggtgggtggcccgatagggaaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 33834258  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  33834257 gcctaacacaaccccacaaaa 33834237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 36993251 - 36993347
Alignment:
Q  118 atagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaat 214  Q
    |||||| ||| ||||||||| || |||| | ||||| |||||||||||||||  ||||||  ||||  |||||||||||||||||| | ||||||||    
T  36993251 atagcggaaatctgatagcacgtggcccaatggatcttgaagaggctctgataccatcttagaaatcatggttggatctaacacaattccacaaaat 36993347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 37346997 - 37347045
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  37346997 ggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaa 37347045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 17842773 - 17842723
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||| | ||||||||||||||||||||||||    
T  17842773 aggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaac 17842723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 32821240 - 32821190
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| ||||| ||||||||||||||||||    
T  32821240 aggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaac 32821190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 26239856 - 26239945
Alignment:
Q  116 tgatagcgaaaacctgatagcaagtagcccgacggatcctgaag-aggctctgatgacatcttcaaaattgtggttggatctaacacaac 204  Q
    ||||| || ||||||||||||| || |||| ||||||| || || ||||||||||  ||||||  ||||||||||||| |||||||||||    
T  26239856 tgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaattgtggttgggtctaacacaac 26239945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 37109847 - 37109896
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||| | ||||||||||||||||||||||||    
T  37109847 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaac 37109896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 43686012 - 43686065
Alignment:
Q  336 tataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||| |||||| |||||| || ||||||||||| ||||||||||||    
T  43686012 tataggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaac 43686065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 24211717 - 24211765
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||| |||||| ||||||| | ||||||||||||||||||||||||    
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaac 24211765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 25620302 - 25620182
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||    |||||| ||||||||||||| || |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  25620302 gtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 25620203  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  25620202 gcctaacacaaccccacaaaa 25620182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 28080806 - 28080710
Alignment:
Q  117 gatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    ||||||| |||| |||||||| || |||| |  |||| |||||||||||||||  ||||||  |||| |||||||||||||||| |||  |||||||    
T  28080806 gatagcggaaacttgatagcaggtggcccaatagatcttgaagaggctctgatatcatcttagaaatcgtggttggatctaacataaccccacaaaa 28080710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 48928748 - 48928704
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagt 385  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  48928748 gaaaattttatggtgaagtcatgagaatgacttttctggtgaagt 48928704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 1596759 - 1596648
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||||||| |||||||||| || || |||| | ||||| || ||||||||||||  ||||||  ||||||||||| |    
T  1596759 gtggacataaatggtgggtggcccgatagcggaaacctgataacatgtggcccaatggatcttggagaggctctgataccatcttagaaattgtggttag 1596660  T
Q  193 atctaacacaac 204  Q
      ||||||||||    
T  1596659 gcctaacacaac 1596648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 21821947 - 21821836
Alignment:
Q  118 atagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaattgg 217  Q
    |||||| ||||||| |||||  | |||| ||| ||| |||||||||||||||  ||||||  |||| ||||||||  |||||||||   |||||||| ||    
T  21821947 atagcggaaacctgctagcagttggcccaacgtatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaatcgg 21821848  T
Q  218 tttatgagatga 229  Q
    ||| ||||||||    
T  21821847 tttgtgagatga 21821836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 25691729 - 25691682
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||| ||||||||| |||||||||| | |||||||||||    
T  25691729 aaaattttatggtgaagtcatgagaatgacttttctcgtgaagttaac 25691682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 27421563 - 27421516
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||| |||||| ||||| ||||||||| ||||||||||||||||||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaac 27421516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 9356013 - 9355963
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||||||| ||||||||| ||||||  |||||||||| |||||    
T  9356013 aggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaac 9355963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 21861460 - 21861350
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||||||| |||||||||| || || |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  21861460 gtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 21861361  T
Q  193 atctaacacaa 203  Q
      |||||||||    
T  21861360 gcctaacacaa 21861350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 21991606 - 21991660
Alignment:
Q  335 atataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||| || ||| ||||||||| ||||| |||| |||||||||||||    
T  21991606 atataggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaac 21991660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 5657667 - 5657618
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||||| |||||||||| | |||||||||||    
T  5657667 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaac 5657618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 4582894 - 4582942
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||| |||||| |||||| || |||||||||| ||||||||||||    
T  4582894 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaa 4582942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 4902340 - 4902388
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||||||||| ||||||||| ||| | |||||||||||| ||||    
T  4902340 ggaaaattttatggtgaagtcatgaaaataatttttttggtgaatttaa 4902388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 380
Target Start/End: Complemental strand, 10359400 - 10359360
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggt 380  Q
    |||||||| |||||| |||||||||||||||||||| ||||    
T  10359400 ggaaaattctatggtgaagtcatgataatgacttttctggt 10359360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 21311395 - 21311451
Alignment:
Q  174 tcttcaaaattgtggttggatctaacacaacttcacaaaattggtttatgagatgag 230  Q
    |||| |||||||| ||||||||||||||||| ||| ||||| | ||| |||||||||    
T  21311395 tcttaaaaattgtagttggatctaacacaacctcataaaatcgatttgtgagatgag 21311451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 23402419 - 23402371
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||| |||||  ||||||||| |||||||||| ||||||||||||    
T  23402419 ggaaaattctatggcgaagtcatgagaatgacttttctggtgaagttaa 23402371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 339 - 387
Target Start/End: Complemental strand, 31794308 - 31794260
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagtta 387  Q
    ||||||||| ||||||||| | ||||||||||||||| || ||||||||    
T  31794308 aggaaaattctatggtaaatttatgataatgacttttctgatgaagtta 31794260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 40746185 - 40746229
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagca 137  Q
    ||||| ||||||||| ||||||| |||| ||||||||||||||||    
T  40746185 gtggacataaatggtgggtggttcgataacgaaaacctgatagca 40746229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 4319008 - 4318958
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  4319008 aggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaac 4318958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 340 - 390
Target Start/End: Complemental strand, 24662238 - 24662188
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaact 390  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  24662238 ggaaaattctatggtaaagtcatgataatgacttttctagtgaagttaact 24662188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 213
Target Start/End: Original strand, 6542893 - 6542981
Alignment:
Q  125 aaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    ||||||||||||||||  ||| | ||||| |||||||||||||||  ||||||  |||| |||||||| |||||||||||  |||||||    
T  6542893 aaacctgatagcaagtgacccaatggatcttgaagaggctctgataccatctttgaaatcgtggttgggtctaacacaaccccacaaaa 6542981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 7055401 - 7055350
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||||||| ||||||| | ||||| ||||||||||||||||||    
T  7055401 taggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaac 7055350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 8513232 - 8513282
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  8513232 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaac 8513282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 12330097 - 12330217
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||| ||| ||||||||||||| || |||| | ||||| || ||||||||||||  ||| ||  |||| ||||||||    
T  12330097 gtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgg 12330196  T
Q  193 atctaacacaacttcacaaaa 213  Q
      |||||||||| ||||||||    
T  12330197 gcctaacacaacctcacaaaa 12330217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 13353367 - 13353247
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||||||| |||||||||| || || |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  13353367 gtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 13353268  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  13353267 gcctaacacaaccccacaaaa 13353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 33796492 - 33796372
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||||||| |||||||||| || || |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  33796492 gtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 33796393  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  33796392 gcctaacacaaccccacaaaa 33796372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 3880125 - 3880074
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||| |||||| |||||| || |||||||||| |||||||||||||    
T  3880125 taggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaac 3880074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 27993560 - 27993599
Alignment:
Q  94 tggatataaatggtaggtggtttgatagcgaaaacctgat 133  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  27993560 tggatataaatggtaggtggcttgatagcggaaacctgat 27993599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 30353540 - 30353493
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  30353540 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaac 30353493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 5627390 - 5627440
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| || ||| ||||||| | ||||||||||||||||||||||||    
T  5627390 aggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaac 5627440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 19631748 - 19631797
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| ||||||| | |||||||||| ||||||||||||    
T  19631748 aggaaaattctatggtgaagtcataagaatgacttttctggtgaagttaa 19631797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 21193596 - 21193646
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  21193596 aggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaac 21193646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 35844316 - 35844366
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  35844316 aggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaac 35844366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 29575870 - 29575919
Alignment:
Q  155 tgaagaggctctgatgacatcttcaaaattgtggttggatctaacacaac 204  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  29575870 tgaagaggctctgataccatcttaaaaattgtggttggatctaacacaac 29575919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 51213166 - 51213117
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  51213166 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaac 51213117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 19954370 - 19954446
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgat 169  Q
    ||||| ||||||||| ||||||  |||||||||||||||||||||  | |||| | ||||| |||||||||||||||    
T  19954370 gtggacataaatggtgggtggtcagatagcgaaaacctgatagcagatggcccaatggatcttgaagaggctctgat 19954446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 40552447 - 40552395
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||| |||||| ||||||||| |||||||||||||| |||||||||    
T  40552447 ataggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaac 40552395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 45828185 - 45828065
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| ||||| | ||||||| ||||||| ||||| || || | | ||||| || ||||||||||||  ||||||  |||||||||| ||    
T  45828185 gtggacataaatggtgggtggctcgatagcggaaacctggtagcaggtggcgcaatggatcttggagaggctctgataccatcttagaaattgtggtagg 45828086  T
Q  193 atctaacacaacttcacaaaa 213  Q
      |||||||||| ||||||||    
T  45828085 gcctaacacaacctcacaaaa 45828065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 410 - 473
Target Start/End: Original strand, 42204670 - 42204733
Alignment:
Q  410 atactgtcttggttaatcaaaattcatcttctccaaaattcacattctcgaactctaaaaccgt 473  Q
    |||| |||||| | |||||||||||||||||||||||||||| |||||||| | |||| |||||    
T  42204670 ataccgtcttgctcaatcaaaattcatcttctccaaaattcatattctcgacccctaacaccgt 42204733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 38392673 - 38392628
Alignment:
Q  343 aaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||    
T  38392673 aaattatatggtgaagtcatgagaatgacttttttggtgaagttaa 38392628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 40640683 - 40640634
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| ||||||||| |||||||||| ||||||||||||    
T  40640683 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaa 40640634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 42665590 - 42665541
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||| |||||| |||| |||||||||| |||||||||||||||||    
T  42665590 aggaaaattctatggtgaagttatgataatgatttttttggtgaagttaa 42665541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 49359685 - 49359628
Alignment:
Q  331 ttatatataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||  |||||||| |||||| ||||||||| |||||||||||| ||||||||||    
T  49359685 ttatataatggaaaattctatggtgaagtcatgaaaatgactttttttgtgaagttaa 49359628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 389
Target Start/End: Complemental strand, 11835790 - 11835742
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||| |||||| ||||||||| ||||| ||||||||||||||||||    
T  11835790 gaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaac 11835742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 26941448 - 26941396
Alignment:
Q  337 ataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||| |||||| ||||||| | ||||| ||||||||||||||||||    
T  26941448 ataggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaac 26941396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 3655389 - 3655338
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||||||| ||||||| | ||||||||||||| | ||||||||    
T  3655389 taggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaac 3655338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 46297945 - 46297898
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaac 46297898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 7327670 - 7327620
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||| |||||| |||| |||| |||||||||||| ||||||||||    
T  7327670 taggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaa 7327620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 21888573 - 21888527
Alignment:
Q  91 gtgtggatataaatggtaggtggtttgatagcgaaaacctgatagca 137  Q
    ||||||||||||||||| ||||||  ||||||| |||||||||||||    
T  21888573 gtgtggatataaatggtgggtggtccgatagcggaaacctgatagca 21888527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 48354931 - 48354981
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| ||||| |||| |||||||||||||    
T  48354931 aggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaac 48354981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 342 - 388
Target Start/End: Complemental strand, 53818555 - 53818509
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||||||||||| ||||||||| ||||| |||| ||||||||||||    
T  53818555 aaaattttatggtgaagtcatgagaatgatttttctggtgaagttaa 53818509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 23165883 - 23165838
Alignment:
Q  343 aaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    ||||| |||||| ||||||||||||||| |||||| ||||||||||    
T  23165883 aaattctatggtgaagtcatgataatgatttttttagtgaagttaa 23165838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 45174494 - 45174543
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||||| ||||  ||| ||| ||||||||||||||||||||    
T  45174494 ggaaaattttatggtgaagttgtgagaataacttttttggtgaagttaac 45174543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 11466811 - 11466863
Alignment:
Q  336 tataggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||||| |||||| ||||| ||| |||||||||| || |||||||||    
T  11466811 tataggaaaattctatggtgaagtcttgagaatgacttttctgatgaagttaa 11466863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 20303303 - 20303423
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| |||||   ||||| | ||||||||||||| || |||| | ||||  |  ||||||||||||  ||| ||  |||||||||||||    
T  20303303 gtggacataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggattttagagaggctctgataccatattagaaattgtggttgg 20303402  T
Q  193 atctaacacaacttcacaaaa 213  Q
    | ||||||||||  |||||||    
T  20303403 acctaacacaaccccacaaaa 20303423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 20373481 - 20373433
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||||||| || ||||||| | ||||| |||||||||||||||||    
T  20373481 ggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaa 20373433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 29163839 - 29163887
Alignment:
Q  341 gaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||||||| ||||||| | ||||| |||| |||||||||||||    
T  29163839 gaaaattttatggtgaagtcattaaaatgatttttctggtgaagttaac 29163887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 43976068 - 43976032
Alignment:
Q  342 aaaattttatggtaaagtcatgataatgacttttttg 378  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  43976068 aaaattttatggtgaagtcatgagaatgacttttttg 43976032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 47930714 - 47930666
Alignment:
Q  340 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaa 388  Q
    |||||||| |||||| ||||||||| ||||| |||| ||||||||||||    
T  47930714 ggaaaattctatggtgaagtcatgaaaatgatttttctggtgaagttaa 47930666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 5672 - 5783
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| ||||||  ||||||| ||||||||||||| || || | | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  5672 gtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 5771  T
Q  193 atctaacacaac 204  Q
      ||||||||||    
T  5772 gcctaacacaac 5783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 213
Target Start/End: Complemental strand, 5815 - 5701
Alignment:
Q  99 ataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttggatctaa 198  Q
    ||||| ||| |||| || |||| || ||||||||||||| || |||| | ||||  |||||||||||||||  ||||||  |||| |||||||| |||||    
T  5815 ataaacggtgggtgattcgataacggaaacctgatagcaggtggcccaatggattttgaagaggctctgataccatcttagaaatcgtggttgggtctaa 5716  T
Q  199 cacaacttcacaaaa 213  Q
    ||||||  |||||||    
T  5715 cacaaccccacaaaa 5701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 100820 - 100870
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||||| ||||| ||||||||||||||||||    
T  100820 aggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaac 100870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 42346 - 42397
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||||||||||| ||||||||| ||| | |||| |||||||||||||    
T  42346 taggaaaattttatggtgaagtcatgagaataatttttctggtgaagttaac 42397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 2082 - 1962
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| ||||||||| ||||  | ||||||| |||||||||| || || |||| | ||||| || ||||||||||||  ||||||  |||| ||||||||    
T  2082 gtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 1983  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  1982 gcctaacacaaccccacaaaa 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 132 - 183
Alignment:
Q  338 taggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    |||||||||| |||||| |||||| || |||||||||| |||||||||||||    
T  132 taggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaac 183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 408755 - 408705
Alignment:
Q  339 aggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaac 389  Q
    ||||||||| |||||| ||||||| | ||||| ||||||||||||||||||    
T  408755 aggaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaac 408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 14469 - 14349
Alignment:
Q  93 gtggatataaatggtaggtggtttgatagcgaaaacctgatagcaagtagcccgacggatcctgaagaggctctgatgacatcttcaaaattgtggttgg 192  Q
    ||||| |||||||||||||||   ||||||| |||||||||| ||  | |||| | ||||| || ||||||||||||  ||||||  |||  ||||||||    
T  14469 gtggacataaatggtaggtggcccgatagcggaaacctgataacatatggcccaatggatcttggagaggctctgataccatcttagaaaacgtggttgg 14370  T
Q  193 atctaacacaacttcacaaaa 213  Q
      ||||||||||  |||||||    
T  14369 gcctaacacaaccccacaaaa 14349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 89551 - 89591
Alignment:
Q  173 atcttcaaaattgtggttggatctaacacaacttcacaaaa 213  Q
    ||||| ||||||||||||||| |||||||||| ||||||||    
T  89551 atcttaaaaattgtggttggacctaacacaacctcacaaaa 89591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University