View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18235_low_15 (Length: 252)

Name: NF18235_low_15
Description: NF18235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18235_low_15
NF18235_low_15
[»] chr5 (43 HSPs)
chr5 (148-239)||(119012-119103)
chr5 (148-239)||(119955-120046)
chr5 (148-239)||(19353235-19353326)
chr5 (148-239)||(19352301-19352392)
chr5 (148-239)||(3191800-3191890)
chr5 (148-239)||(3878774-3878865)
chr5 (148-239)||(39402214-39402304)
chr5 (148-234)||(119186-119272)
chr5 (148-238)||(19353067-19353157)
chr5 (148-236)||(14626089-14626177)
chr5 (148-236)||(31093427-31093514)
chr5 (148-239)||(5747189-5747279)
chr5 (148-239)||(6543417-6543507)
chr5 (148-239)||(21949402-21949492)
chr5 (148-239)||(39402642-39402732)
chr5 (152-234)||(119786-119868)
chr5 (190-236)||(3192231-3192277)
chr5 (190-239)||(28641589-28641638)
chr5 (148-237)||(31092997-31093086)
chr5 (190-239)||(31162464-31162513)
chr5 (148-237)||(31162851-31162939)
chr5 (148-236)||(30351704-30351792)
chr5 (190-237)||(19352515-19352562)
chr5 (190-237)||(21949830-21949877)
chr5 (148-226)||(18999368-18999446)
chr5 (148-237)||(28641163-28641251)
chr5 (148-236)||(718224-718312)
chr5 (189-229)||(3406692-3406732)
chr5 (148-235)||(4187837-4187924)
chr5 (190-237)||(6543845-6543892)
chr5 (148-235)||(30415485-30415571)
chr5 (148-237)||(5746763-5746851)
chr5 (148-225)||(18340661-18340738)
chr5 (148-236)||(4186756-4186844)
chr5 (191-239)||(14625166-14625214)
chr5 (148-236)||(30350603-30350691)
chr5 (148-235)||(31588347-31588435)
chr5 (148-235)||(87262-87349)
chr5 (148-235)||(35295617-35295703)
chr5 (148-226)||(8750370-8750448)
chr5 (148-225)||(31176509-31176586)
chr5 (192-228)||(8647358-8647394)
chr5 (148-204)||(35294851-35294907)
[»] chr2 (49 HSPs)
chr2 (148-237)||(10708025-10708114)
chr2 (148-239)||(3854068-3854159)
chr2 (148-237)||(44934682-44934771)
chr2 (148-235)||(2191219-2191306)
chr2 (148-239)||(12089696-12089787)
chr2 (148-239)||(39096954-39097044)
chr2 (148-238)||(10709477-10709567)
chr2 (148-238)||(39947084-39947174)
chr2 (148-224)||(21182309-21182385)
chr2 (148-239)||(1804660-1804750)
chr2 (148-239)||(6476089-6476179)
chr2 (148-239)||(11451184-11451274)
chr2 (192-239)||(22701558-22701605)
chr2 (148-239)||(27377651-27377741)
chr2 (148-237)||(1804234-1804322)
chr2 (148-237)||(6476517-6476605)
chr2 (148-236)||(3854498-3854585)
chr2 (148-236)||(26525895-26525982)
chr2 (148-236)||(44929985-44930073)
chr2 (148-235)||(2035610-2035697)
chr2 (148-235)||(21217322-21217409)
chr2 (148-235)||(21264993-21265080)
chr2 (152-238)||(10710828-10710914)
chr2 (148-226)||(24093158-24093236)
chr2 (190-236)||(39096567-39096613)
chr2 (148-238)||(39945844-39945934)
chr2 (148-229)||(24093331-24093412)
chr2 (148-205)||(30311199-30311256)
chr2 (148-229)||(32861047-32861128)
chr2 (142-222)||(2191386-2191466)
chr2 (148-236)||(12090126-12090213)
chr2 (148-235)||(21216925-21217012)
chr2 (148-235)||(21265390-21265477)
chr2 (148-235)||(21267369-21267456)
chr2 (148-235)||(23222864-23222951)
chr2 (192-239)||(26525507-26525554)
chr2 (148-238)||(10711000-10711090)
chr2 (190-236)||(34037852-34037898)
chr2 (148-225)||(3691400-3691477)
chr2 (148-237)||(11450758-11450846)
chr2 (190-239)||(18107422-18107471)
chr2 (148-237)||(27378079-27378167)
chr2 (148-224)||(3624925-3625001)
chr2 (148-236)||(23221836-23221924)
chr2 (148-224)||(32114483-32114559)
chr2 (190-235)||(2036604-2036649)
chr2 (190-239)||(18105760-18105809)
chr2 (199-236)||(22701945-22701982)
chr2 (198-239)||(34038249-34038290)
[»] chr8 (29 HSPs)
chr8 (148-239)||(4624362-4624453)
chr8 (148-229)||(21005956-21006037)
chr8 (148-229)||(44024400-44024481)
chr8 (148-236)||(4624535-4624623)
chr8 (148-236)||(29917538-29917625)
chr8 (149-239)||(12734601-12734691)
chr8 (148-236)||(26720323-26720411)
chr8 (148-234)||(4694434-4694520)
chr8 (148-235)||(9800344-9800431)
chr8 (148-235)||(40304686-40304773)
chr8 (190-236)||(29917148-29917194)
chr8 (190-239)||(24846006-24846055)
chr8 (148-236)||(12734175-12734262)
chr8 (148-224)||(44803575-44803651)
chr8 (148-235)||(6297464-6297551)
chr8 (148-235)||(6298036-6298123)
chr8 (149-224)||(16662483-16662558)
chr8 (149-235)||(26243396-26243482)
chr8 (148-225)||(11089133-11089210)
chr8 (148-224)||(16662170-16662246)
chr8 (148-236)||(36155273-36155361)
chr8 (148-236)||(44148579-44148667)
chr8 (148-235)||(17915508-17915594)
chr8 (148-235)||(44802184-44802270)
chr8 (153-235)||(6297863-6297945)
chr8 (148-226)||(9800041-9800119)
chr8 (148-229)||(10047653-10047734)
chr8 (158-224)||(45369134-45369200)
chr8 (190-235)||(36156359-36156404)
[»] chr7 (28 HSPs)
chr7 (148-239)||(41298246-41298337)
chr7 (148-239)||(884684-884775)
chr7 (148-239)||(1244013-1244104)
chr7 (148-239)||(28898457-28898548)
chr7 (148-237)||(18443178-18443266)
chr7 (148-239)||(18443606-18443696)
chr7 (148-235)||(11974666-11974753)
chr7 (148-236)||(1244443-1244530)
chr7 (148-236)||(28898031-28898118)
chr7 (148-236)||(41298676-41298763)
chr7 (148-239)||(29784376-29784466)
chr7 (190-240)||(22954089-22954139)
chr7 (148-237)||(27310049-27310138)
chr7 (148-237)||(30939563-30939652)
chr7 (148-235)||(17075618-17075705)
chr7 (148-235)||(32092230-32092317)
chr7 (190-237)||(33848296-33848343)
chr7 (190-236)||(33847909-33847955)
chr7 (148-224)||(44803644-44803720)
chr7 (148-232)||(11974894-11974974)
chr7 (148-235)||(12933062-12933149)
chr7 (148-235)||(17075221-17075308)
chr7 (190-229)||(20544145-20544184)
chr7 (190-236)||(27311048-27311094)
chr7 (190-236)||(29783978-29784024)
chr7 (189-226)||(10466658-10466695)
chr7 (154-235)||(12908389-12908470)
chr7 (154-235)||(22948879-22948960)
[»] chr4 (49 HSPs)
chr4 (148-239)||(21235030-21235120)
chr4 (148-240)||(30545715-30545807)
chr4 (148-239)||(1317062-1317153)
chr4 (148-239)||(28505211-28505301)
chr4 (148-239)||(46263063-46263154)
chr4 (148-237)||(47053763-47053852)
chr4 (148-228)||(10580042-10580122)
chr4 (151-239)||(12923070-12923158)
chr4 (148-236)||(47058507-47058595)
chr4 (148-235)||(17288374-17288461)
chr4 (148-239)||(43979559-43979650)
chr4 (148-229)||(29691746-29691827)
chr4 (148-236)||(789897-789984)
chr4 (148-236)||(12922644-12922731)
chr4 (148-239)||(790323-790414)
chr4 (148-239)||(28957739-28957829)
chr4 (148-235)||(49426353-49426440)
chr4 (148-235)||(51906820-51906907)
chr4 (190-240)||(2669050-2669100)
chr4 (148-236)||(7164989-7165078)
chr4 (190-239)||(38026104-38026153)
chr4 (148-236)||(2669438-2669525)
chr4 (148-224)||(7118176-7118252)
chr4 (148-236)||(43979989-43980076)
chr4 (148-235)||(3296545-3296632)
chr4 (148-227)||(7118002-7118080)
chr4 (148-235)||(17287489-17287576)
chr4 (190-237)||(40841892-40841939)
chr4 (148-235)||(54142327-54142414)
chr4 (190-236)||(12108289-12108335)
chr4 (190-240)||(38025719-38025769)
chr4 (190-236)||(40841505-40841551)
chr4 (148-222)||(48554071-48554145)
chr4 (190-236)||(54167538-54167584)
chr4 (190-239)||(21235458-21235507)
chr4 (148-237)||(28957313-28957401)
chr4 (148-237)||(31227881-31227969)
chr4 (190-239)||(31228307-31228356)
chr4 (190-239)||(55347604-55347653)
chr4 (190-235)||(55347970-55348015)
chr4 (143-235)||(49424451-49424543)
chr4 (148-235)||(3296945-3297032)
chr4 (148-234)||(1317494-1317579)
chr4 (148-222)||(1791389-1791463)
chr4 (148-226)||(26168167-26168245)
chr4 (148-229)||(5545018-5545099)
chr4 (192-239)||(28505638-28505685)
chr4 (148-235)||(54143502-54143589)
chr4 (148-222)||(51906595-51906668)
[»] chr3 (46 HSPs)
chr3 (148-239)||(22406844-22406935)
chr3 (148-239)||(34950184-34950275)
chr3 (148-237)||(20826730-20826819)
chr3 (148-237)||(35300746-35300835)
chr3 (148-235)||(48868588-48868675)
chr3 (148-226)||(132069-132147)
chr3 (148-237)||(4199455-4199543)
chr3 (148-236)||(20831101-20831189)
chr3 (148-236)||(22407274-22407361)
chr3 (147-235)||(33225489-33225577)
chr3 (148-236)||(35301893-35301981)
chr3 (148-239)||(4199883-4199973)
chr3 (148-235)||(44504387-44504474)
chr3 (190-239)||(46689725-46689774)
chr3 (148-236)||(34949758-34949845)
chr3 (148-236)||(36899256-36899343)
chr3 (150-226)||(50732229-50732305)
chr3 (150-226)||(50780550-50780626)
chr3 (148-235)||(3799724-3799811)
chr3 (192-239)||(27475726-27475773)
chr3 (190-237)||(45539252-45539299)
chr3 (148-235)||(51507920-51508007)
chr3 (190-240)||(2389059-2389109)
chr3 (190-240)||(36899681-36899731)
chr3 (190-236)||(42606323-42606369)
chr3 (190-240)||(42606707-42606757)
chr3 (190-236)||(45539640-45539686)
chr3 (148-237)||(7248488-7248577)
chr3 (148-225)||(9218524-9218601)
chr3 (148-229)||(25770496-25770577)
chr3 (148-225)||(33226933-33227010)
chr3 (148-229)||(37172256-37172337)
chr3 (148-237)||(46690112-46690200)
chr3 (148-232)||(27475392-27475475)
chr3 (148-235)||(22814298-22814385)
chr3 (148-235)||(48867652-48867739)
chr3 (190-236)||(2388675-2388721)
chr3 (148-225)||(44504267-44504344)
chr3 (190-235)||(54588501-54588546)
chr3 (148-235)||(13637781-13637868)
chr3 (148-235)||(47343726-47343813)
chr3 (190-236)||(51587573-51587619)
chr3 (148-229)||(9218348-9218429)
chr3 (148-177)||(27013584-27013613)
chr3 (151-235)||(25770326-25770410)
chr3 (148-224)||(25770728-25770804)
[»] chr1 (33 HSPs)
chr1 (148-239)||(45230131-45230222)
chr1 (148-239)||(30427675-30427766)
chr1 (148-239)||(17968465-17968556)
chr1 (148-237)||(1500980-1501069)
chr1 (148-229)||(3591171-3591252)
chr1 (148-227)||(12869663-12869742)
chr1 (148-239)||(32266485-32266575)
chr1 (148-239)||(40124078-40124168)
chr1 (190-236)||(9122728-9122774)
chr1 (148-234)||(12868435-12868521)
chr1 (190-240)||(47410466-47410516)
chr1 (190-238)||(8997384-8997432)
chr1 (148-236)||(17968039-17968126)
chr1 (148-240)||(46802749-46802840)
chr1 (148-236)||(47410854-47410941)
chr1 (148-235)||(5172747-5172834)
chr1 (148-235)||(18179881-18179968)
chr1 (190-240)||(9123112-9123162)
chr1 (148-230)||(45665947-45666029)
chr1 (148-237)||(32266913-32267001)
chr1 (190-239)||(46802365-46802414)
chr1 (148-236)||(30428105-30428192)
chr1 (148-236)||(45230561-45230648)
chr1 (148-236)||(45664689-45664777)
chr1 (148-235)||(3591338-3591425)
chr1 (148-235)||(37717797-37717883)
chr1 (190-237)||(40124506-40124553)
chr1 (148-229)||(19895575-19895656)
chr1 (148-213)||(50359290-50359355)
chr1 (148-236)||(36793574-36793662)
chr1 (148-235)||(5683163-5683250)
chr1 (148-235)||(9880486-9880573)
chr1 (148-235)||(19976166-19976253)
[»] scaffold0148 (2 HSPs)
scaffold0148 (148-236)||(32994-33082)
scaffold0148 (148-237)||(29276-29365)
[»] chr6 (24 HSPs)
chr6 (148-239)||(33106931-33107022)
chr6 (148-229)||(14712832-14712913)
chr6 (148-235)||(8710341-8710428)
chr6 (143-224)||(7645994-7646075)
chr6 (148-240)||(15148145-15148236)
chr6 (148-235)||(211443-211530)
chr6 (148-235)||(5974013-5974100)
chr6 (148-239)||(20824166-20824256)
chr6 (190-240)||(14257574-14257624)
chr6 (190-239)||(6162288-6162337)
chr6 (143-236)||(6162688-6162780)
chr6 (148-236)||(14257149-14257236)
chr6 (148-236)||(33107361-33107448)
chr6 (148-239)||(15147720-15147810)
chr6 (148-237)||(20824594-20824682)
chr6 (148-236)||(34984545-34984631)
chr6 (190-239)||(20228232-20228281)
chr6 (190-235)||(20522157-20522202)
chr6 (190-239)||(22122216-22122265)
chr6 (148-239)||(20521187-20521278)
chr6 (148-229)||(8709601-8709676)
chr6 (148-214)||(14713028-14713094)
chr6 (148-213)||(17157856-17157921)
chr6 (190-235)||(19595650-19595695)
[»] scaffold0085 (2 HSPs)
scaffold0085 (148-239)||(39849-39939)
scaffold0085 (190-237)||(39464-39511)
[»] scaffold0009 (2 HSPs)
scaffold0009 (148-235)||(107724-107811)
scaffold0009 (148-225)||(107897-107974)
[»] scaffold0177 (1 HSPs)
scaffold0177 (148-235)||(25843-25930)


Alignment Details
Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 119012 - 119103
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  119012 ttaaatatgtttttggtccctacattttgccctcctttaataaatagtccttacatttcaataaatgtttttaaaatccctacatttttcct 119103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 120046 - 119955
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  120046 ttaaatatgtttttggtccctacattttgcccttctttgacaaatagtccttacatttcaataaatgtttttaaaatccttacatttttcct 119955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 19353326 - 19353235
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||| |||||||||| || |||||||| || || ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  19353326 ttaaatatatttttggtccctatattttgccatcatttgataaatagtccttacatttcaataaacgtttttaaaatccatacatttttcct 19353235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 19352301 - 19352392
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||| | |||||||| ||||  || || |||||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  19352301 ttaaatatgtttttggttcctacattttacccttttttgacaaatagtccttacatttcaataaatgtttttaaaattcttacatttttcct 19352392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 3191800 - 3191890
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||||||||| |||| |||||||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3191800 ttaaatatgtttttagtccctacattttgcacgattttgagaa-tagtccttacatttcaataaatgtttttaaaatccctacatttttcct 3191890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 3878774 - 3878865
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  3878774 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctatatttttcct 3878865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 39402214 - 39402304
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  39402214 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 39402304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 119186 - 119272
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattt 234  Q
    |||||||||||||||||||||| |||||||    |||  |  ||||||||||||||||||||||||| |||||||||||||||||||    
T  119186 ttaaatatgtttttggtccttagattttgcgtgactttaaagaatagtccttacatttcaataaatgtttttaaaatccctacattt 119272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 19353157 - 19353067
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcc 238  Q
    |||||||||||||||||||||| ||||||     ||| ||  ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19353157 ttaaatatgtttttggtccttagattttgtgtgactttgaagaatagtcctcacatttcaataaatgtttttaaaatccctacatttttcc 19353067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 14626177 - 14626089
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| || | ||||| |  |||  | ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  14626177 ttaaatatgtttttggtccctatactttgcgcgactttaaaaaatagtccctacatttcaataaatgtttttaaaatccctacattttt 14626089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 31093514 - 31093427
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || ||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  31093514 ttaaatatgtttttggtccctacattttgcgcgattttga-aaatagtccctacatttcaatgaatgtttttaaaatccctacattttt 31093427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 5747279 - 5747189
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  5747279 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 5747189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 6543417 - 6543507
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  6543417 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 6543507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 21949402 - 21949492
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  21949402 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 21949492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 39402732 - 39402642
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  39402732 ttaaatatgtttttggtccctacattttacacgattttgagaa-tagtccttacatttcaataaatatttttaaaatccctacatttttcct 39402642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 119868 - 119786
Alignment:
Q  152 atatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattt 234  Q
    |||||||||||||||||| |||||||    ||| ||  |||||||||| |||||||||||||| |||||||||||||||||||    
T  119868 atatgtttttggtccttatattttgcgtgactttgaagaatagtccttgcatttcaataaatgtttttaaaatccctacattt 119786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 3192277 - 3192231
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  3192277 aatagtccttacatttcaataaatgtttttaaaatccctacattttt 3192231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 28641638 - 28641589
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28641638 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 28641589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 31092997 - 31093086
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||||||||||||||||||  || |||||| |   || || || ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  31092997 ttaaatatgtttttggtcccaacgttttgcacgattttgagaattagtccttacatttcaatagatgtttttaaaatccctacatttttc 31093086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 31162464 - 31162513
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  31162464 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 31162513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 31162939 - 31162851
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || || |||||||||||||||||||| ||||||||||||||||||||||    
T  31162939 ttaaatatgtttttggtccctacattttacgcgattttgagaa-taatccttacatttcaataaatgtttttaaaatccctacatttttc 31162851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 30351792 - 30351704
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||| ||| ||| |||||||| ||||||||  |  |||||||| |||||||||||||||  ||||||||| |||||||||||    
T  30351792 ttaaatatgttattgatccctacattttaccctcctttaaagaatagtccctacatttcaataaatatttttaaaattcctacattttt 30351704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 19352515 - 19352562
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  19352515 aatagtccttgcatttcaataaatgtttttaaaatccctacatttttc 19352562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 21949877 - 21949830
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  21949877 aatagtccctacatttcaataaatgtttttaaaatccctacatttttc 21949830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 18999368 - 18999446
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcc 226  Q
    |||||||||||||| ||||||||||||||| ||| || ||  |||||||| ||||||||| |||||  |||||||||||    
T  18999368 ttaaatatgtttttagtccttacattttgcactcttttgaagaatagtccatacatttcattaaatatttttaaaatcc 18999446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 28641163 - 28641251
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || || ||| |||||||||||||||| ||||||||||||||||||||||    
T  28641163 ttaaatatgtttttggtccctacattttacgcgattttgagaa-taatccctacatttcaataaatgtttttaaaatccctacatttttc 28641251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 718312 - 718224
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||| | ||||||||||     || ||  |||||| |||||||||||||||||| ||||||||||||| |||||||    
T  718312 ttaaatatgtttttggttcctacattttgcataattttgaataatagttcttacatttcaataaatgtttttaaaatccctgcattttt 718224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 3406732 - 3406692
Alignment:
Q  189 aaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  3406732 aaatagtccttacatttcaataaatgtttttaaaatcccta 3406692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 4187924 - 4187837
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| |||| |||||||||| |  |||  |  ||||||||||||||||||||||||  |||||||||||  |||||||    
T  4187924 ttaaatatgtttttagtccctacattttgcgcaactttaaataatagtccttacatttcaataaatatttttaaaatcctcacatttt 4187837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 6543892 - 6543845
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  6543892 aataatccctacatttcaataaatgtttttaaaatccctacatttttc 6543845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 30415571 - 30415485
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||| |||| ||||||||||||| | |||||||||  |||||||| |||||||| || |||| |||||||||||  |||||||    
T  30415571 ttaaatatggttttagtccttacattttacgctccttcgaagaatagtccctacatttc-attaatgtttttaaaatcctcacatttt 30415485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 5746763 - 5746851
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || || ||| |||||||||||||||| ||| ||||||||||||||||||    
T  5746763 ttaaatatgtttttggtccctacattttacgcgattttgagaa-taatccctacatttcaataaatgttttaaaaatccctacatttttc 5746851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 18340738 - 18340661
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatc 225  Q
    ||||||||| |||| |||||||||| |||| | ||||  |  |||||||||||||||||| |||||| ||||||||||    
T  18340738 ttaaatatgattttagtccttacatgttgcgccccttttaagaatagtccttacatttcattaaatgtttttaaaatc 18340661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 4186756 - 4186844
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||| ||| ||| ||||||| || |  ||| ||  |||||| | |||||||||||||||| |||||| ||||||||||||||    
T  4186756 ttaaatatgttattgatccctacatttagcacgactttgaagaatagtacctacatttcaataaatgtttttaatatccctacattttt 4186844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 14625166 - 14625214
Alignment:
Q  191 atagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||| || |||| |||||||| ||||||||||||||||||||||||    
T  14625166 atagtccataaattttaataaatgtttttaaaatccctacatttttcct 14625214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 30350603 - 30350691
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||  || ||||| || |||||  | | ||||||| |||||||||||||||  ||||||||| |||| ||||||    
T  30350603 ttaaatatgtttttggtctctatattttaccttcctttaaaatatagtccctacatttcaataaatatttttaaaattcctatattttt 30350691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 31588435 - 31588347
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgc-cctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| |||||||||||||||  | |||| ||  |||||||| ||||||||| |||||  |||||||||||  |||||||    
T  31588435 ttaaatatgtttttagtccttacattttgcgtcccctttgaagaatagtccctacatttcattaaatatttttaaaatcctaacatttt 31588347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 87349 - 87262
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||| ||||||    |||| ||  |||||||| ||||||||| |||||| |||||||||||  |||||||    
T  87349 ttaaatatgtttttagtccttatattttgtgtccctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 87262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 35295703 - 35295617
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| |||| |||||||| | ||| || |||||||||| | ||||||| |  ||||  ||||||||||||||||||||    
T  35295703 ttaaatatgtttttagtccctacattttacgctcttt-gataaatagttcctacatttaagaaaatatttttaaaatccctacatttt 35295617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 8750448 - 8750370
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcc 226  Q
    |||||||||||||| |||||||||||||||  | ||| ||  |||||||| ||||||| | ||||||  ||||||||||    
T  8750448 ttaaatatgtttttagtccttacattttgcgtttctttgaagaatagtccctacattttattaaatgtgtttaaaatcc 8750370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 31176509 - 31176586
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatc 225  Q
    |||||||||||||| ||||||| |||||||   |||| ||  || ||||| ||||||||| |||||| ||||||||||    
T  31176509 ttaaatatgtttttagtccttatattttgcgtccctttgaagaacagtccatacatttcattaaatgtttttaaaatc 31176586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 8647394 - 8647358
Alignment:
Q  192 tagtccttacatttcaataaatgcttttaaaatccct 228  Q
    |||||||| |||||||||||||| |||||||||||||    
T  8647394 tagtccttgcatttcaataaatgtttttaaaatccct 8647358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 35294851 - 35294907
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatt 204  Q
    |||||||||||||| |||| |||||||| | ||| || |||||||||||| ||||||    
T  35294851 ttaaatatgtttttagtccctacattttacgctcttttgataaatagtccctacatt 35294907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 10708025 - 10708114
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  10708025 ttaaatatgtttttggtccctacattttgccctcttttgacaaatagtccttacatttcaataaatgtttttaaaattcctacatttttc 10708114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 3854068 - 3854159
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3854068 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 3854159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 44934771 - 44934682
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| ||    ||  || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44934771 ttaaatatgtttttggtccctacatttttcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttc 44934682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 2191219 - 2191306
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||||||||||| | |||| ||  |||||||||||||||||| |||||| |||||||||||  |||||||    
T  2191219 ttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatttt 2191306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 12089696 - 12089787
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  12089696 ttaaatatgtttttggtccctacgttttgcacaattttgagaattagttcttacatttcaataaatgtttttaaaatccctacatttttcct 12089787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 39097044 - 39096954
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||||| |   || || || || |||||||||||||||||||| ||||||||||||||||||||||||    
T  39097044 ttaaatatgtttttggtccctacattttgcacgattttgagaa-taatccttacatttcaataaatgtttttaaaatccctacatttttcct 39096954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 10709477 - 10709567
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcc 238  Q
    |||||||||||||||||| ||| |||||||     || ||  ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10709477 ttaaatatgtttttggtctttagattttgcgtgattttgaagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcc 10709567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 39947174 - 39947084
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcc 238  Q
    ||||||||||||||||||| |||||||||     ||| ||  ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  39947174 ttaaatatgtttttggtccctacattttgagtgactttgaacaatagtccttacatttcaataaatgtttttaaaatccgtacatttttcc 39947084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 21182309 - 21182385
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    |||||||||||||| ||||||||||||||| | |||| ||  |||||||||||||||||| |||||| |||||||||    
T  21182309 ttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccttacatttcattaaatgtttttaaaat 21182385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 1804750 - 1804660
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  1804750 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 1804660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 6476089 - 6476179
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  6476089 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 6476179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 11451274 - 11451184
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  11451274 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 11451184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 22701558 - 22701605
Alignment:
Q  192 tagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22701558 tagtccttacatttcaataaatgtttttaaaatccctacatttttcct 22701605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 27377651 - 27377741
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  27377651 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 27377741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 1804234 - 1804322
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||    
T  1804234 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttc 1804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 6476605 - 6476517
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||    
T  6476605 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttc 6476517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 3854585 - 3854498
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||||||||||    
T  3854585 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctacattttt 3854498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 26525982 - 26525895
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || ||| |||||||| || ||||||||||||| |||||||||||||||| ||||    
T  26525982 ttaaatatgtttttggtccctacattttgcgcgattttgat-aatagtccctatatttcaataaatgtttttaaaatccctacaatttt 26525895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 44929985 - 44930073
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| ||||||||  |    ||  || ||||||||||||||||||||||||  |||||||||||||||||||||    
T  44929985 ttaaatatgtttttggtccctacattttttctcattttaattaatagtccttacatttcaataaatatttttaaaatccctacattttt 44930073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 2035610 - 2035697
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||||||||||| || ||||| ||||| ||  |  |||| ||| ||||||| |||||||| ||||||||||||||||||||    
T  2035610 ttaaatatgtttttggtccctatattttaccctcttttaaagaataatccctacattttaataaatgtttttaaaatccctacatttt 2035697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 21217409 - 21217322
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||||||||||| |  ||| ||  |||||||| ||||||||| |||||| |||||||||||  |||||||    
T  21217409 ttaaatatgtttttagtccttacattttgcgccgctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 21217322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 21264993 - 21265080
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||||||||||| |  ||| ||  |||||||| ||||||||| |||||| |||||||||||  |||||||    
T  21264993 ttaaatatgtttttagtccttacattttgcgccgctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 21265080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 10710914 - 10710828
Alignment:
Q  152 atatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcc 238  Q
    |||||||||||||||||| |||||||    ||| ||  ||||| |||| |||||||||||||| ||||||||| |||||||||||||    
T  10710914 atatgtttttggtccttatattttgcgtgactttgaagaatagcccttgcatttcaataaatgtttttaaaattcctacatttttcc 10710828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 24093158 - 24093236
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcc 226  Q
    |||||||||||||| ||||||||| ||||| | |||| ||  |||||||| ||||||||| |||||| |||||||||||    
T  24093158 ttaaatatgtttttagtccttacactttgcgcccctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 24093236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 39096567 - 39096613
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||    
T  39096567 aatagtccttacatttcaataaatgtttttaaaatccatacattttt 39096613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 39945844 - 39945934
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcc 238  Q
    |||||||||||||||||||  ||||||||     ||| ||  ||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  39945844 ttaaatatgtttttggtcccaacattttgagtgactttgaacaatagtccttacatttcaataaatgtttttaaaatccttatatttttcc 39945934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 24093331 - 24093412
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||| ||| |||||||||     ||| || ||||||||||| |||||||||||||| ||||||||||||||    
T  24093331 ttaaatatgtttttgatccctacattttgagtgactttgaaaaatagtccttgcatttcaataaatgtttttaaaatcccta 24093412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 30311199 - 30311256
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacattt 205  Q
    ||||||||||||| |||||||||||||||| ||| || || |||||||||||||||||    
T  30311199 ttaaatatgttttcggtccttacattttgcactcatttgaaaaatagtccttacattt 30311256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 32861128 - 32861047
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||||||| | |||||||     ||| || |||||||||||| ||||||||||||| ||||||||||||||    
T  32861128 ttaaatatgtttttggtccctgcattttgtgtgactttgaaaaatagtccttatatttcaataaatgtttttaaaatcccta 32861047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 2191386 - 2191466
Alignment:
Q  142 ttagacttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaa 222  Q
    ||||| ||||||||||||||||||||||||||||||    ||| ||  |||| ||||||||||| |||||||| |||||||    
T  2191386 ttagaattaaatatgtttttggtccttacattttgcttgactttgaagaataatccttacattttaataaatgtttttaaa 2191466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 12090213 - 12090126
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| | |||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||||||||||    
T  12090213 ttaaatatgtttttggtccctgcattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctacattttt 12090126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 21216925 - 21217012
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| ||||| ||||||||||||||| |  ||| ||  |||||||| ||||||||| |||||| |||||||||||  |||||||    
T  21216925 ttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 21217012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 21265477 - 21265390
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| ||||| ||||||||||||||| |  ||| ||  |||||||| ||||||||| |||||| |||||||||||  |||||||    
T  21265477 ttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 21265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 21267456 - 21267369
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||||||||| |  ||||| ||  |||||||| ||||||||| |||||| ||| |||||||  |||||||    
T  21267456 ttaaatatgtttttagtccttacatttttcgatcctttgaagaatagtccctacatttcattaaatgttttaaaaatcctcacatttt 21267369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 23222951 - 23222864
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| |||| |||||||||| |  |||  |  ||||||||||||||||||||| ||| |||||||||||  |||||||    
T  23222951 ttaaatatgtttttagtccctacattttgcgcaactttaaataatagtccttacatttcaatatatgtttttaaaatcctcacatttt 23222864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 26525507 - 26525554
Alignment:
Q  192 tagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||    
T  26525507 tagttcttacatttcaataaatatttttaaaatccctacatttttcct 26525554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 10711090 - 10711000
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcc 238  Q
    ||||||||||||||||||| || ||||| |  | |||  | ||||||||||||||||| | |||||  ||||||||||| |||||||||||    
T  10711090 ttaaatatgtttttggtccctatattttacttttctttaaaaaatagtccttacattttagtaaatatttttaaaatccttacatttttcc 10711000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 34037852 - 34037898
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||    
T  34037852 aatagtccctacatttcaatgaatgtttttaaaatccctacattttt 34037898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 3691477 - 3691400
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatc 225  Q
    |||||||||||||| ||||||  ||||||| | |||| ||  |||||||| ||||||||| |||||| ||||||||||    
T  3691477 ttaaatatgtttttagtccttgtattttgcgcccctttgaagaatagtccctacatttcattaaatgtttttaaaatc 3691400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 11450758 - 11450846
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || || ||| |||||||||||||||| ||| ||||||||||||||||||    
T  11450758 ttaaatatgtttttggtccctacattttacgcgattttgagaa-taatccctacatttcaataaatgttttaaaaatccctacatttttc 11450846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 18107471 - 18107422
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||| ||||||||||| |||||||| |||||||||||||| |||||||||    
T  18107471 aataatccttacattttaataaatgtttttaaaatccctaaatttttcct 18107422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 27378167 - 27378079
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || || ||| |||||||||||||||| ||| ||||||||||||||||||    
T  27378167 ttaaatatgtttttggtccctacattttacgcgattttgagaa-taatccctacatttcaataaatgttttaaaaatccctacatttttc 27378079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 3625001 - 3624925
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    ||||||||||||| ||| ||||||||||| |   ||| ||  |||||||| |||||||||||||||| |||||||||    
T  3625001 ttaaatatgttttcggttcttacattttgacggactttgaagaatagtccctacatttcaataaatgtttttaaaat 3624925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 23221836 - 23221924
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||| ||| ||| ||||||| || |  ||| ||  |||||| | |||||||||||||||| |||||| ||||||||||||||    
T  23221836 ttaaatatgttattgatccctacatttagcacgactttgaagaatagtacctacatttcaataaatgtttttaatatccctacattttt 23221924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 32114559 - 32114483
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    |||||||| ||||| ||||||||||||||| |  |||| |  |||||||||||||||||| |||||  |||||||||    
T  32114559 ttaaatatatttttagtccttacattttgcgcctcttcaaagaatagtccttacatttcattaaatatttttaaaat 32114483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 2036649 - 2036604
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| ||||||||||| |||| |||||||||||||| |||||    
T  2036649 aatagtccctacatttcaattaatgtttttaaaatccctatatttt 2036604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 18105760 - 18105809
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||| ||| |||||||||||||| | ||||||||| ||||||||||||||    
T  18105760 aatattccctacatttcaataaaggtttttaaaattcctacatttttcct 18105809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 22701982 - 22701945
Alignment:
Q  199 tacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  22701982 tacatttcaatgaatgtttttaaaatccctacattttt 22701945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 34038290 - 34038249
Alignment:
Q  198 ttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||  ||||||||| ||||||||||||||    
T  34038290 ttacatttcaataaatatttttaaaattcctacatttttcct 34038249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 4624362 - 4624453
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||| | |||||||| |||||||| || |||| ||| ||||||||||||||||| ||||||||||||||||||||||||    
T  4624362 ttaaatatgtttttggtgcctacatttttccctcctttgacaaatcgtctttacatttcaataaatgtttttaaaatccctacatttttcct 4624453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 21006037 - 21005956
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||||||| ||||||||||    ||| || |||||||||||||||||||||||||| ||||||||||||||    
T  21006037 ttaaatatgtttttggtccctacattttgcgtggctttgaaaaatagtccttacatttcaataaatgtttttaaaatcccta 21005956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 44024400 - 44024481
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||||||||||||||||||    ||| || |||||||||||||||||||||||||  ||||||||||||||    
T  44024400 ttaaatatgtttttggtccttacattttgcgtgactttgaaaaatagtccttacatttcaataaatatttttaaaatcccta 44024481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 4624535 - 4624623
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||||||||||||||||| |||||||    ||| ||  ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  4624535 ttaaatatgtttttggtccttatattttgcatgactttgaagaatagtctttacatttcaataaatgtttttaaaatccctacattttt 4624623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 29917625 - 29917538
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || ||||||||||||||||||||||| |||||||||||||||||||||    
T  29917625 ttaaatatgtttttggtccctacattttgcacgattttgagaa-tagtccttacatttcaataaatgtttttaaaatccctacattttt 29917538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 12734691 - 12734601
Alignment:
Q  149 taaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||||||||||||| ||| |||||| |   || || || |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  12734691 taaatatgtttttggtccctacgttttgcacgattttgagaattagttcttacatttcaataaatgtttttaaaatccctacatttttcct 12734601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 26720323 - 26720411
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||| ||||| |||| |||||||||| |||||| ||  |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  26720323 ttaaatatatttttagtccctacattttgcgctcctttgaagaatagtccctacatttcattaaatatttttaaaatccctacattttt 26720411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 4694520 - 4694434
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattt 234  Q
    |||||||||||||| |||| || ||||| | ||| || |||||||||||| ||||||| | |||||| |||||||||||||||||||    
T  4694520 ttaaatatgtttttagtccctatattttacgctcttttgataaatagtccctacatttaagtaaatgtttttaaaatccctacattt 4694434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 9800431 - 9800344
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| |||||||||||| |||||||| | |||| ||  |||||||| || |||||| |||||| ||||||||||| ||||||||    
T  9800431 ttaaatatatttttggtccttgcattttgcgcccctttgaagaatagtccatatatttcattaaatgtttttaaaatccttacatttt 9800344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 40304686 - 40304773
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| ||||| |||| |||||||||| |||||| |||||||||||| ||||||| | |||||  |||||||||||  |||||||    
T  40304686 ttaaatatatttttagtccctacattttgcactcctttgataaatagtccatacatttaagtaaatatttttaaaatcctcacatttt 40304773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 29917148 - 29917194
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  29917148 aatagtccctacatttcaataaatgtttttaaaatccctacattttt 29917194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 24846006 - 24846055
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||    
T  24846006 aatagtccttacatttcaataaatgtttttaaaattcctatatttttcct 24846055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 12734175 - 12734262
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||  |||||||||||||||||||||    
T  12734175 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatatttttaaaatccctacattttt 12734262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 44803651 - 44803575
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    |||||||||| ||| |||| |||||||||| |||||| |||||||||||| ||||||| | |||| | |||||||||    
T  44803651 ttaaatatgtgtttagtccctacattttgcgctcctttgataaatagtccctacatttaagtaaaagtttttaaaat 44803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 6297464 - 6297551
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||| ||| ||||||||||||||| | |||| ||  |||||| | ||||||||| |||||| |||||||||||  |||||||    
T  6297464 ttaaatatgtctttagtccttacattttgcgcccctttgaagaatagttcctacatttcattaaatgtttttaaaatcctcacatttt 6297551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 6298123 - 6298036
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||| ||||||| || ||||||||||||   |||| ||  |||||||||||||||||| |||||| |||||||||||  |||||||    
T  6298123 ttaaatgtgtttttagtgcttacattttgcttccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatttt 6298036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 16662558 - 16662483
Alignment:
Q  149 taaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    ||||||||||||| ||||||||||||||| ||| || ||  |||||| | ||||||||| |||||| |||||||||    
T  16662558 taaatatgtttttagtccttacattttgcgctcttttgaagaatagttcctacatttcattaaatgtttttaaaat 16662483  T

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Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 26243482 - 26243396
Alignment:
Q  149 taaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||||| ||||||| ||||||| |||||| ||  |||||||  || |||||| |||||| |||||||||||  |||||||    
T  26243482 taaatatgtttttagtccttatattttgcgctcctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacatttt 26243396  T

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Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 11089210 - 11089133
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatc 225  Q
    ||||||||||||||||||| ||||||||      ||| || ||||||| |||||||||||||||||| ||||||||||    
T  11089210 ttaaatatgtttttggtccatacattttatgtgactttgaaaaatagttcttacatttcaataaatgtttttaaaatc 11089133  T

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Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 16662170 - 16662246
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    |||| |||| |||| || |||||||||||| |||||| ||  |||||||| ||||||||| |||||| |||||||||    
T  16662170 ttaattatgattttagttcttacattttgcgctcctttgaagaatagtccctacatttcattaaatgtttttaaaat 16662246  T

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Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 36155273 - 36155361
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||| | ||||||| |||||||||  |  ||| ||  |||||||| ||||||| |||||||| ||||||||||| |||||||||    
T  36155273 ttaaatatgctattggtccctacattttgtgcgactttgaataatagtccctacattttaataaatgtttttaaaatccttacattttt 36155361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 44148579 - 44148667
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||||||||| |||| |||||||| | ||| || ||  |||||||| ||||||| |||||| | |||||||||||  ||||||||    
T  44148579 ttaaatatgtttttagtccctacattttacgctcttttgaagaatagtccctacattttaataaacgtttttaaaatcctcacattttt 44148667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 17915594 - 17915508
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||||||||||  |||||| ||  |||| ||||||||||| | |||||| |||| ||||||  |||||||    
T  17915594 ttaaatatgtttttagtccttacattttgtgctcctttgaagaata-tccttacattttattaaatgttttttaaatcctcacatttt 17915508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 44802184 - 44802270
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||  ||||||||| ||| || |||||||||||| ||||||| ||  |||| |||||||||||  |||||||    
T  44802184 ttaaatatgtttttagtcccaacattttgcgctcatttgataaatagtccatacattt-aagtaatgtttttaaaatcctcacatttt 44802270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 6297945 - 6297863
Alignment:
Q  153 tatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||| |||| ||||||||||    ||| ||  |||||||||||||||||| |||||| |||||||||||  |||||||    
T  6297945 tatgtttttcgtccctacattttgcgtgactttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatttt 6297863  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 9800041 - 9800119
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcc 226  Q
    |||||||||||||| ||||||| ||||||| |  ||| ||  |||| ||||||||||| | |||||| |||||||||||    
T  9800041 ttaaatatgtttttagtccttagattttgcgcctctttgaagaataatccttacattttattaaatgtttttaaaatcc 9800119  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 10047653 - 10047734
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttc-gataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||||||  ||||||||||  |  ||| || ||||||||||| ||||||| |||||| ||||||||||||||    
T  10047653 ttaaatatgtttttggtctctacattttgca-tgattctgaaaaatagtccttgcatttcactaaatgtttttaaaatcccta 10047734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 45369200 - 45369134
Alignment:
Q  158 ttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    |||| ||||||| ||||||  ||||||  | ||||| |||||||||||||||||||| |||||||||    
T  45369200 ttttagtccttatattttgtgctcctttaaaaaataatccttacatttcaataaatgtttttaaaat 45369134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 36156404 - 36156359
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||| || |||||||||||||| ||||||||||| ||||||||    
T  36156404 aatagtctttgcatttcaataaatgtttttaaaatccttacatttt 36156359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 41298246 - 41298337
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41298246 ttaaatatgtttttggtccctacattttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 41298337  T

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Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 884684 - 884775
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  884684 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 884775  T

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Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 1244013 - 1244104
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1244013 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 1244104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 28898548 - 28898457
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28898548 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 28898457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 18443178 - 18443266
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  18443178 ttaaatatgtttttggtccctacattttgcacgattttgagaa-tagtccttacatttcaataaatgtttttaaaatccctacatttttc 18443266  T

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Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 18443696 - 18443606
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||||||||||||||||||||||||| |   || || || |||||| |||||||||||||||| |||||||||||||| |||||||||    
T  18443696 ttaaatatgtttttggtccttacattttgcgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctatatttttcct 18443606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 11974666 - 11974753
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||| |||| ||||||||||||||| |||||| || ||||||||  ||||||||| |||||| |||||||||||  |||||||    
T  11974666 ttaaatatgattttagtccttacattttgcgctcctttgaaaaatagtctgtacatttcattaaatgtttttaaaatcctcacatttt 11974753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 1244530 - 1244443
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||||||||||    
T  1244530 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctacattttt 1244443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 28898031 - 28898118
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||||||||||    
T  28898031 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctacattttt 28898118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 41298763 - 41298676
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||||||||||    
T  41298763 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctacattttt 41298676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 29784466 - 29784376
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  29784466 ttaaatatgtttttggtccctacgttttgcacgattttgagaa-tagtctttacatttcaataaatatttttaaaatccctacatttttcct 29784376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 22954089 - 22954139
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  22954089 aatagtccctacattttaataaatgtttttaaaatccctacatttttcctt 22954139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 27310049 - 27310138
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||  ||| |||||||| | | | |||||  ||| |||| ||||||||| |||||| ||||||||||||||||||||||    
T  27310049 ttaaatatgtttttattccctacattttacgccctttcgaagaatggtccctacatttcattaaatgtttttaaaatccctacatttttc 27310138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 30939652 - 30939563
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||||||||||||| |||| |||||||| | |   |||||  |||||||| ||||||||| |||||  ||||||||||||||||||||||    
T  30939652 ttaaatatgtttttagtccctacattttacgccatttcgaagaatagtccctacatttcattaaatatttttaaaatccctacatttttc 30939563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 17075705 - 17075618
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| ||||| ||||||||||||||| |  ||| ||  |||||||| ||||||||| |||||| |||||||||||  |||||||    
T  17075705 ttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 17075618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 32092230 - 32092317
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||||||||||| |  ||| ||  |||||||| | ||||||| |||||| |||||||||||  |||||||    
T  32092230 ttaaatatgtttttagtccttacattttgcgcctctttgaagaatagtccctgcatttcattaaatgtttttaaaatcctcacatttt 32092317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 33848343 - 33848296
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  33848343 aatagtccctacatttcaataaatgtttttaaaattcctacatttttc 33848296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 33847909 - 33847955
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||    
T  33847909 aatagtctctacatttcaataaatgtttttaaaatccctacattttt 33847955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 44803720 - 44803644
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    |||||||||||||| ||||||||||||||| || |||  |  |||||||  ||||||||| |||||| |||||||||    
T  44803720 ttaaatatgtttttagtccttacattttgcgcttctttaaagaatagtctctacatttcattaaatgtttttaaaat 44803644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 11974974 - 11974894
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacat 232  Q
    ||||||||||||||||||| ||||||||||    |||    |||||||| || |||||||||||||| ||||||||| |||||||    
T  11974974 ttaaatatgtttttggtccctacattttgcgtgactt----aaatagtctttgcatttcaataaatgtttttaaaattcctacat 11974894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 12933149 - 12933062
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| |||| |||||||||   ||||| |||||||||||| || |||| | |||||| || ||||||||  |||||||    
T  12933149 ttaaatatgtttttagtccctacattttgtgttcctttgataaatagtccctatatttaagtaaatgtttctaaaatcctcacatttt 12933062  T

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Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 17075221 - 17075308
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||| ||||||| |  ||| ||  |||||||| ||||||||| |||| | |||||||||||  |||||||    
T  17075221 ttaaatatgtttttagtccttatattttgcgccgctttgaagaatagtccctacatttcattaaaagtttttaaaatcctcacatttt 17075308  T

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Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 20544184 - 20544145
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  20544184 aatagtccttgcatttcaataaatgtttttaaaatcccta 20544145  T

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Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 27311094 - 27311048
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||||    
T  27311094 aatagtccctacatttcattaaatgtttttaaaattcctacattttt 27311048  T

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Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 29783978 - 29784024
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||| || ||||||||||||| ||||||||| |||||||||||    
T  29783978 aatagtccctatatttcaataaatgtttttaaaattcctacattttt 29784024  T

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Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 10466658 - 10466695
Alignment:
Q  189 aaatagtccttacatttcaataaatgcttttaaaatcc 226  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  10466658 aaatagtccttacatttcaataaatgtttttataatcc 10466695  T

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Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 12908389 - 12908470
Alignment:
Q  154 atgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| |||| |||||||| | ||| || |||||||| ||| ||||||| | |||||| |||||||||||  |||||||    
T  12908389 atgtttttagtccctacattttacgctcatttgataaataatccctacatttaactaaatgtttttaaaatcctcacatttt 12908470  T

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Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 22948960 - 22948879
Alignment:
Q  154 atgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| |||||||||||||||   |||| ||  |||||||  ||||||||| |||||| |||||||||||  |||||||    
T  22948960 atgtttttagtccttacattttgcgaccctttgaagaatagtctctacatttcattaaatgtttttaaaatcctcacatttt 22948879  T

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Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 21235030 - 21235120
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||||| |   || ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21235030 ttaaatatgtttttggtccctacattttgcacgattttgat-aatagtccttacatttcaataaatgtttttaaaatccctacatttttcct 21235120  T

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Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 30545715 - 30545807
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30545715 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctt 30545807  T

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Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 1317062 - 1317153
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1317062 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 1317153  T

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Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 28505211 - 28505301
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28505211 ttaaatatgtttttggtccctacattttgcacgattttgagaa-tagtccttacatttcaataaatgtttttaaaatccctacatttttcct 28505301  T

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Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 46263154 - 46263063
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46263154 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 46263063  T

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Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 47053763 - 47053852
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||| ||||||| |||||||||||    ||  || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47053763 ttaaatatgttattggtccctacattttgcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttc 47053852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 10580042 - 10580122
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccct 228  Q
    ||||||||||||||||||| ||||||||||    ||| || |||||||||||||||||||||||||| |||||||||||||    
T  10580042 ttaaatatgtttttggtccatacattttgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaaatccct 10580122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 12923158 - 12923070
Alignment:
Q  151 aatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||||||||||| |||||||||  |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12923158 aatatgtttttggtccctacattttgtacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 12923070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 47058595 - 47058507
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||||    ||  || ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  47058595 ttaaatatgtttttggtccctacattttgcctcattttaattaatagtctttacatttcaataaatgtttttaaaatccctacattttt 47058507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 17288461 - 17288374
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||| || |||| |||||||||| || ||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||    
T  17288461 ttaaatatgttattagtccctacattttgcgctactttgaataatagtccctacatttcaataaatgtttttaaaatccctacatttt 17288374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 43979559 - 43979650
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||  |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43979559 ttaaatatgtttttggtccctatgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 43979650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 29691827 - 29691746
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||||||||||||||||||    |||  | |||||||| ||||||||||||||||| ||||||||||||||    
T  29691827 ttaaatatgtttttggtccttacattttgcgtgactttaaaaaatagtctttacatttcaataaatgtttttaaaatcccta 29691746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 789897 - 789984
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || ||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  789897 ttaaatatgtttttggtccctacattttgcgcaattttga-aaatagtccatacatttcaatgaatgtttttaaaatccctacattttt 789984  T

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Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 12922644 - 12922731
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| |||||||||||||||| |||||||||||||||||||||    
T  12922644 ttaaatatgtttttggtccctacattttgcgcaattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacattttt 12922731  T

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Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 790414 - 790323
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||  |||||| |   || || || ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  790414 ttaaatatgtttttggtccctaagttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaattcctacatttttcct 790323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 28957829 - 28957739
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28957829 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 28957739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 49426440 - 49426353
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| |||| |||||||||| || |||  |  ||||||||||||||||||||||||  ||||||||||| ||||||||    
T  49426440 ttaaatatgttttttgtccctacattttgctctactttaaataatagtccttacatttcaataaatatttttaaaatccttacatttt 49426353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 51906907 - 51906820
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||||||||||| |||||| ||  |||||||| ||||| ||| |||||| |||||||||||  |||||||    
T  51906907 ttaaatatgtttttagtccttacattttgcgctcctttgaagaatagtccctacatctcattaaatgtttttaaaatcctcacatttt 51906820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 2669050 - 2669100
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  2669050 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctt 2669100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 7165078 - 7164989
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatt-tcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||  ||||||||||||| ||| || ||||| |||||||||| || ||||||| ||||||||| || ||||||||    
T  7165078 ttaaatatgtttttggtctctacattttgcccttctttgagaaataatccttacattgtcgataaatgtttttaaaattcccacattttt 7164989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 38026153 - 38026104
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  38026153 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 38026104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 2669525 - 2669438
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| |||||||||||||||||||||    
T  2669525 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacattttt 2669438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 7118252 - 7118176
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    |||||||||||||| ||||||||||||||| | |||| ||  |||||||| ||||||||| |||||| |||||||||    
T  7118252 ttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccatacatttcattaaatgtttttaaaat 7118176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 43980076 - 43979989
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||||||||||    
T  43980076 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctacattttt 43979989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 3296545 - 3296632
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||||||||||| | |||| ||  |||| ||| ||||||||| |||||| |||||||||||  |||||||    
T  3296545 ttaaatatgtttttagtccttacattttgcgcccctttgaagaatattccctacatttcattaaatgtttttaaaatcctcacatttt 3296632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 7118080 - 7118002
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccc 227  Q
    |||||||||||||||||||| ||||||||| |  ||| || |||||||||||| ||||||||| ||| ||||||||||||    
T  7118080 ttaaatatgtttttggtcct-acattttgcgcgactttgaaaaatagtccttaaatttcaatacatgtttttaaaatccc 7118002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 17287489 - 17287576
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||| || |||| |||||||||| || |||  |  ||||||||||||||||||||||||  ||||||||| ||||||||||    
T  17287489 ttaaatatgttattagtccctacattttgcgctactttaaataatagtccttacatttcaataaatatttttaaaattcctacatttt 17287576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 40841939 - 40841892
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  40841939 aatagtccctacatttcaataaatgtttttaaaatccctacatttttc 40841892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 54142327 - 54142414
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||| || |||| |||||||||| |  ||| ||  |||||||| |||||||||||||||| ||||||||||| ||||||||    
T  54142327 ttaaatatgttattagtccctacattttgcgcgactttgaagaatagtccatacatttcaataaatgtttttaaaatccttacatttt 54142414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 12108335 - 12108289
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  12108335 aatagtccctacatttcaataaatgtttttaaaatccctacattttt 12108289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 38025719 - 38025769
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  38025719 aatagtccttacatttcaataaaaaattttaaaatccctacatttttcctt 38025769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 40841505 - 40841551
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  40841505 aatagtccctacatttcaataaatgtttttaaaatccctacattttt 40841551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 48554071 - 48554145
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaa 222  Q
    ||||||||||||||||||| ||||||||||    ||| ||  |||||||||||||||| ||||||||||||||||    
T  48554071 ttaaatatgtttttggtccctacattttgcgtgactttgaagaatagtccttacattttaataaatgcttttaaa 48554145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 54167538 - 54167584
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  54167538 aatagtccttatatttcaataaatgtttttaaaatccctacattttt 54167584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 21235507 - 21235458
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  21235507 aatagtccctacatttcaataaatgtttttaaaatctctacatttttcct 21235458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 28957313 - 28957401
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || || ||| |||||||||||||||| ||||||||||||||||||||||    
T  28957313 ttaaatatgtttttggtccctacattttacgcgattttgagaa-taatccctacatttcaataaatgtttttaaaatccctacatttttc 28957401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 31227881 - 31227969
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || || ||| |||||||||||||||| ||||||||||||||||||||||    
T  31227881 ttaaatatgtttttggtccctacattttacgcgattttgagaa-taatccctacatttcaataaatgtttttaaaatccctacatttttc 31227969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 31228356 - 31228307
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  31228356 aatagttcctacatttcaataaatgtttttaaaatccctacatttttcct 31228307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 55347604 - 55347653
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  55347604 aatagtccctacattttaataaatgtttttaaaatccctacatttttcct 55347653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 55348015 - 55347970
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  55348015 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 55347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 49424451 - 49424543
Alignment:
Q  143 tagacttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||| |||||||| |||||  ||| || ||||||| || ||| ||  ||||||| |||||| |||||||||| ||||||||||||||||||||    
T  49424451 tagagttaaatatattttttatccctatattttgcgctactttgaataatagtctttacatatcaataaatgtttttaaaatccctacatttt 49424543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 3297032 - 3296945
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| ||||| |||||||||||||||   |||| ||  |||||||| ||| ||||| |||||| ||||||||||| ||||||||    
T  3297032 ttaaatatatttttagtccttacattttgcgaccctttgaagaatagtccctacgtttcattaaatgtttttaaaatccttacatttt 3296945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 1317579 - 1317494
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattt 234  Q
    ||||||||||||||||| | |||||||||| |   || || ||||||||| ||||||||||| |||| ||||||||| |||||||||    
T  1317579 ttaaatatgtttttggttcctacattttgcgcgattttga-aaatagtccctacatttcaatgaatgtttttaaaattcctacattt 1317494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 1791463 - 1791389
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaa 222  Q
    |||||||||||||||| || ||| ||||||    ||| || |||||||||||||||||||||||||| |||||||    
T  1791463 ttaaatatgtttttggcccctacgttttgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaa 1791389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 26168167 - 26168245
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcc 226  Q
    ||||||||||||||| ||| ||||||||||  | |||    ||||||||||| |||||||||||||| |||||||||||    
T  26168167 ttaaatatgtttttgatccctacattttgcgttactttagaaaatagtccttgcatttcaataaatgtttttaaaatcc 26168245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 5545099 - 5545018
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||| | | ||||||||||    ||| || ||||||| |||||||||||||||||| ||||||||| ||||    
T  5545099 ttaaatatgtttttgcttcctacattttgcgtgactttgaaaaatagttcttacatttcaataaatgtttttaaaatgccta 5545018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 28505685 - 28505638
Alignment:
Q  192 tagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||| ||||||| |||||||| |||||||||||||| |||||||||    
T  28505685 tagtccctacattttaataaatgtttttaaaatccctatatttttcct 28505638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 54143589 - 54143502
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||| || |||| || ||||||| |  ||| ||  |||||||| ||||||| |||||||| ||||||||||| ||||||||    
T  54143589 ttaaatatgttattagtccctatattttgcacgactttgaagaatagtccctacattttaataaatgtttttaaaatccttacatttt 54143502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 51906595 - 51906668
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaa 222  Q
    ||||||||||||||||||| ||||||| ||    ||| ||  |||||||||||||||| ||||||||||||||||    
T  51906595 ttaaatatgtttttggtccctacattt-gcgtgactttgaagaatagtccttacattttaataaatgcttttaaa 51906668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 22406844 - 22406935
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||||||| |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22406844 ttaaatatgtttttggtccttacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 22406935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 34950275 - 34950184
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34950275 ttaaatatgtttttggtccctacgttttgcacaattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 34950184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 20826730 - 20826819
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| ||    ||  || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20826730 ttaaatatgtttttggtccctacatttttcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttc 20826819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 35300746 - 35300835
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| ||||||||  | | ||  || ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  35300746 ttaaatatgtttttggtccctacattttatcattctctgacaaataatccttacatttcaataaatgtttttaaaatccctacatttttc 35300835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 48868675 - 48868588
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||| || |||| |||||||||| || ||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||    
T  48868675 ttaaatatgttattagtccctacattttgcgctactttgaataatagtccctacatttcaataaatgtttttaaaatccctacatttt 48868588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 132147 - 132069
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcc 226  Q
    |||||||||| ||| ||||||||||||||| |||||| ||  |||||||||||||||||| |||||| |||||||||||    
T  132147 ttaaatatgtatttagtccttacattttgcactcctttgaagaatagtccttacatttcattaaatgtttttaaaatcc 132069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 4199455 - 4199543
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||||| |   || || || ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  4199455 ttaaatatgtttttggtccctacattttgcacgattttgagaa-tagtccttatatttcaataaatgtttttaaaatccctacatttttc 4199543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 20831189 - 20831101
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| ||||||||  |    ||  || ||||||||||||||||||||||||| |||||||||||||||||||||    
T  20831189 ttaaatatgtttttggtccctacattttttctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacattttt 20831101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 22407361 - 22407274
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || ||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  22407361 ttaaatatgtttttggtccctacattttgcgcaattttga-aaatagtccctacatttcaatgaatgtttttaaaatccctacattttt 22407274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 33225489 - 33225577
Alignment:
Q  147 cttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||||||| |||  |||||||| | |||||| |||||||||||| ||||||| | |||||| |||||||||||| |||||||    
T  33225489 cttaaatatgtttttagtctctacattttacgctcctttgataaatagtccctacatttaagtaaatgtttttaaaatccccacatttt 33225577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 35301981 - 35301893
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||| |||||||||||||||| |||||||| || |||| ||||||| ||||| ||||||  ||||||||| |||| ||||||    
T  35301981 ttaaatatgttattggtccttacattttaccctcctttgacaaatggtccttatatttcgataaatatttttaaaattcctatattttt 35301893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 4199973 - 4199883
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| |||||||||||||||| |||||||||||||| |||||||||    
T  4199973 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctatatttttcct 4199883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 44504474 - 44504387
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||| ||||||| ||||||||||||||| | |||| ||  |||||||||||||||||| |||||| |||||||||||  |||||||    
T  44504474 ttaaatgtgtttttagtccttacattttgcacccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatttt 44504387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 46689725 - 46689774
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  46689725 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 46689774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 34949758 - 34949845
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||||||||||    
T  34949758 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctacattttt 34949845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 36899256 - 36899343
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| |||||||||||||||||||||    
T  36899256 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacattttt 36899343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 50732229 - 50732305
Alignment:
Q  150 aaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcc 226  Q
    ||||||||||||  |||||||||||||| |||||| || ||||||||| ||||||||| |||||  |||||||||||    
T  50732229 aaatatgttttttatccttacattttgcgctcctttgaaaaatagtccatacatttcattaaatatttttaaaatcc 50732305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 50780626 - 50780550
Alignment:
Q  150 aaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcc 226  Q
    ||||||||||||  |||||||||||||| |||||| || ||||||||| ||||||||| |||||  |||||||||||    
T  50780626 aaatatgttttttatccttacattttgcgctcctttgaaaaatagtccatacatttcattaaatatttttaaaatcc 50780550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 3799724 - 3799811
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| ||||| |||| |||||||| | ||| || |||||||||||  ||||||| | |||||| ||||||||||||||||||||    
T  3799724 ttaaatatctttttagtccctacattttacgctcttttgataaatagtctctacatttaagtaaatgtttttaaaatccctacatttt 3799811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 27475773 - 27475726
Alignment:
Q  192 tagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  27475773 tagtccttatatttcaataaatgtttttaaaatccctacatttttcct 27475726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 45539252 - 45539299
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  45539252 aatagtccctacatttcaataaatgtttttaaaatccctacatttttc 45539299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 51508007 - 51507920
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||||||||| | ||| || |||||||||| | ||||||| | |||||| ||||||| ||| ||||||||    
T  51508007 ttaaatatgtttttagtccttacattttacgctcttttgataaatagttcctacatttaagtaaatgtttttaaagtccttacatttt 51507920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 2389109 - 2389059
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  2389109 aatagtccctacattttaataaatgtttttaaaatccctacatttttcctt 2389059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 36899731 - 36899681
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    |||||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  36899731 aatagtccctacatttcaataaatgtttttaaaatccctatatttttcctt 36899681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 42606323 - 42606369
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  42606323 aatagtccctacatttcaataaatgtttttaaaatccctacattttt 42606369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 42606757 - 42606707
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||||||    
T  42606757 aatagtccctacatttcaataaatatttttaaaatccctacatttttcctt 42606707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 45539686 - 45539640
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  45539686 aatagtccctacatttcaataaatgtttttaaaatccctacattttt 45539640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 7248577 - 7248488
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||  ||| |||||||| ||  ||||  | |||||||||| |||||| |||||||  ||||||||||||||||||||||    
T  7248577 ttaaatatgtttttaatccctacattttacctccctttaaaaaatagtcctcacattttaataaatatttttaaaatccctacatttttc 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 9218601 - 9218524
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatc 225  Q
    |||||||||||||| ||| ||||||||||| |||||| ||  |||||||| || |||||| |||||| ||||||||||    
T  9218601 ttaaatatgtttttagtcattacattttgcgctcctttgaagaatagtccctatatttcattaaatgtttttaaaatc 9218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 25770496 - 25770577
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||  ||||||||||||||     || || |||||||| ||||||||||||||||| ||||||||||||||    
T  25770496 ttaaatatgtttttaatccttacattttgcgtgattttgaaaaatagtctttacatttcaataaatgtttttaaaatcccta 25770577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 33227010 - 33226933
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatc 225  Q
    ||||||||||| || |||| |||||||||| |||||| |||||||||||| || |||| | |||||| ||||||||||    
T  33227010 ttaaatatgttcttagtccctacattttgcgctcctttgataaatagtccctatatttaagtaaatgtttttaaaatc 33226933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 37172256 - 37172337
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||||||||||||||||||    ||| || ||||| |||||| ||||||| ||||| |||||||| |||||    
T  37172256 ttaaatatgtttttggtccttacattttgcgtgactttgaaaaataatccttagatttcaacaaatgtttttaaaaccccta 37172337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 46690200 - 46690112
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || || ||| |||||||||||||||| ||||||||||||||||||||||    
T  46690200 ttaaatatgtttttggtccctacattttacgcgattttgagaa-taatccctacatttcaataaatgtttttaaaatccctacatttttc 46690112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 27475392 - 27475475
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacat 232  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||||||    
T  27475392 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctacat 27475475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 22814298 - 22814385
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||||||  | |||||||||||| | |||| ||  |||||||| ||||||||| |||||| |||||||||||  |||||||    
T  22814298 ttaaatatgtttttaattcttacattttgcgcccctttgaagaatagtccatacatttcattaaatgtttttaaaatcctcacatttt 22814385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 48867652 - 48867739
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||| || |||| |||||||||| || |||  |  |||||||| |||||||||||||||  ||||||||||| ||||||||    
T  48867652 ttaaatatgttattagtccctacattttgcgctactttaaataatagtccctacatttcaataaatatttttaaaatccttacatttt 48867739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 2388675 - 2388721
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||    
T  2388675 aatagtctctacatttcaataaatgtttttaaaatccctacattttt 2388721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 44504267 - 44504344
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatc 225  Q
    ||||||||||||||| | ||||||||||||    ||| || || |||||||| |||||||||||||| ||||||||||    
T  44504267 ttaaatatgtttttgattcttacattttgcgtgactttgaaaattagtccttgcatttcaataaatgtttttaaaatc 44504344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 54588501 - 54588546
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||    
T  54588501 aatagtccatacatttcaataaatgtttttaaaattcctacatttt 54588546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 13637868 - 13637781
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||| | ||||||||||||||| | |||| ||  |||||||  ||||||||| |||||  |||||||||||  |||||||    
T  13637868 ttaaatatgtttctagtccttacattttgcgcccctttgaagaatagtctctacatttcattaaatatttttaaaatcctcacatttt 13637781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 47343813 - 47343726
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| ||||  |||| |||||||| |  || || |||||||||||  ||||||| | |||||| ||||||||||||||||||||    
T  47343813 ttaaatatcttttcagtccctacattttacgttcttttgataaatagtctctacatttaagtaaatgtttttaaaatccctacatttt 47343726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 51587573 - 51587619
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||| ||||||||||||||||  |||||||||||||| ||||||    
T  51587573 aatagtcattacatttcaataaatatttttaaaatccctatattttt 51587619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 9218429 - 9218348
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||| ||| ||||||||||    ||| || |||||||  || |||||||||||||| |||| |||||||||    
T  9218429 ttaaatatgtttttgctccctacattttgcgtgactttgaaaaatagtatttgcatttcaataaatgttttttaaatcccta 9218348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 177
Target Start/End: Original strand, 27013584 - 27013613
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgc 177  Q
    ||||||||||||||||||||||||||||||    
T  27013584 ttaaatatgtttttggtccttacattttgc 27013613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 25770326 - 25770410
Alignment:
Q  151 aatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||| ||||||||||||||    |||| ||  |||||||| ||||||||| |||||| ||||| |||||  |||||||    
T  25770326 aatatgtttttagtccttacattttgtatccctttgaagaatagtccctacatttcattaaatgtttttagaatcctcacatttt 25770410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 25770804 - 25770728
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    ||||||||||||||  |||||||||||||| ||| || ||  |||||| | ||||||| | |||||| |||||||||    
T  25770804 ttaaatatgtttttaatccttacattttgcactcatttgaagaatagttcctacattttattaaatgtttttaaaat 25770728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 45230131 - 45230222
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| ||  || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45230131 ttaaatatgtttttggtccctacgttttgcactattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 45230222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 30427675 - 30427766
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30427675 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 30427766  T

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Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 17968556 - 17968465
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17968556 ttaaatatgtttttggtccatacgttttgcacgattttgagaattagtctttacatttcaataaatgtttttaaaatccctacatttttcct 17968465  T

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Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 1501069 - 1500980
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||||||||||||| |||| || ||||||| ||| || ||  |||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  1501069 ttaaatatgtttttagtccctatattttgcgctcttttgaagaatagtccctacatttcattaaatgtttttaaaatccctacatttttc 1500980  T

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Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 3591252 - 3591171
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||||||| |||||| |||    ||| || |||||||||||||||||||||||||| ||||||||||||||    
T  3591252 ttaaatatgtttttggtccctacattgtgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaaatcccta 3591171  T

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Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 12869742 - 12869663
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccc 227  Q
    ||||||||||||||||||| || ||||| ||||||||  |  |||||||| |||||||||||||||| ||||||||||||    
T  12869742 ttaaatatgtttttggtccctatattttaccctcctttaaagaatagtccctacatttcaataaatgtttttaaaatccc 12869663  T

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Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 32266485 - 32266575
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  32266485 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 32266575  T

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Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 40124078 - 40124168
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||||||||||||||||||||||| |     || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  40124078 ttaaatatgtttttggtccttacattttacttgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 40124168  T

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Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 9122728 - 9122774
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  9122728 aatagtccttacatttcaataaatgtttttaaaatccctacattttt 9122774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 12868435 - 12868521
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattt 234  Q
    ||||||||||| ||||||| |||||||| ||||||||  |  |||||| | |||||||||||||||  |||||||||||||||||||    
T  12868435 ttaaatatgttattggtccctacattttaccctcctttaaagaatagttcctacatttcaataaatatttttaaaatccctacattt 12868521  T

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Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 47410466 - 47410516
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  47410466 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctt 47410516  T

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Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 8997384 - 8997432
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcc 238  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  8997384 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcc 8997432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 17968039 - 17968126
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||||||||||    
T  17968039 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctacattttt 17968126  T

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Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 46802840 - 46802749
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    ||||||||||||||||||| ||||||||   |   || || ||||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  46802840 ttaaatatgtttttggtccctacattttatacaattttga-aaatagtccctacattttaataaatgtttttaaaatccctacatttttcctt 46802749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 47410941 - 47410854
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| |||||||||||||||||||||    
T  47410941 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacattttt 47410854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 5172747 - 5172834
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| || |||||||||||| ||| || ||  |||||||  ||||||||| |||||| ||||||||||| ||||||||    
T  5172747 ttaaatatgtttttagttcttacattttgcgctcatttgaagaatagtctctacatttcattaaatgtttttaaaatccttacatttt 5172834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 18179881 - 18179968
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||| |||||||| ||||||||||||||| | |||| || |||||||||||| |||||| ||| || |||||||||||  |||||||    
T  18179881 ttaaacatgtttttagtccttacattttgcacccctttgaaaaatagtccttatatttcattaattgtttttaaaatcctcacatttt 18179968  T

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Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 9123162 - 9123112
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  9123162 aatagtctctacatttcaataaatgtttttaaaatccctacatttttcctt 9123112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 45666029 - 45665947
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctac 230  Q
    ||||||||||| ||||||| |||||||||  ||||||  | ||||||| ||||| |||||||||||  |||||||||||||||    
T  45666029 ttaaatatgttattggtccctacattttgtgctcctttaaaaaatagttcttacgtttcaataaatatttttaaaatccctac 45665947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 32267001 - 32266913
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || || ||| |||||||||||||||| ||||||||||||||||||||||    
T  32267001 ttaaatatgtttttggtccctacattttacgcgattttgagaa-taatccctacatttcaataaatgtttttaaaatccctacatttttc 32266913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 46802365 - 46802414
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  46802365 aatagtccctacatttcaataaaagtttttaaaatccctacatttttcct 46802414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 30428192 - 30428105
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||| | ||||||||||| |||| |||||||||||||||||||||    
T  30428192 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagttcctacatttcaatgaatgtttttaaaatccctacattttt 30428105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 45230648 - 45230561
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||| ||||||    
T  45230648 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctatattttt 45230561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 45664689 - 45664777
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||||||||| |||| |||||||| | ||| || ||  |||||||  ||||||| |||||||| |||||||||||| ||||||||    
T  45664689 ttaaatatgtttttagtccctacattttacgctcatttgaagaatagtctctacattttaataaatgtttttaaaatccccacattttt 45664777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 3591425 - 3591338
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| ||||| ||||||||||||||| ||| || ||  |||||||| ||||||| | |||||| |||||||||||  |||||||    
T  3591425 ttaaatatatttttagtccttacattttgcgctcatttgaagaatagtccatacattttattaaatgtttttaaaatcctcacatttt 3591338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 37717883 - 37717797
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| |||| |||||||| | |  ||| || |||||||||||||||||||||||| | ||||||||||| ||| ||||    
T  37717883 ttaaatatgtttttagtccctacattttacgcaactttga-aaatagtccttacatttcaataaaggtttttaaaatccttacttttt 37717797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 40124553 - 40124506
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  40124553 aataatccctacatttcaataaatgtttttaaaatccctacatttttc 40124506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 19895575 - 19895656
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||||||  || |||||||    ||| || |||||||| || |||||||||||||| ||||||||||||||    
T  19895575 ttaaatatgtttttggtctctatattttgcgtgactttgaaaaatagtctttgcatttcaataaatgtttttaaaatcccta 19895656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 50359355 - 50359290
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaat 213  Q
    ||||||||||||||||||| |||||| |||    ||| || |||||||||||||||||||||||||    
T  50359355 ttaaatatgtttttggtccctacattctgcgtgactttgaaaaatagtccttacatttcaataaat 50359290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 36793662 - 36793574
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||||||||||||| |||| || |||||||    ||| ||  |||||||  ||||||| |||||||| |||||||||||||||||||||    
T  36793662 ttaaatatgtttttagtccctatattttgcgtgactttgaagaatagtctctacattttaataaatgtttttaaaatccctacattttt 36793574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 5683163 - 5683250
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    ||||||||||||||  ||||||||||||||    ||| || ||||||||| ||||||||| ||||||  ||||||||||  |||||||    
T  5683163 ttaaatatgtttttaatccttacattttgcgtctctttgaaaaatagtccctacatttcattaaatgtatttaaaatcctcacatttt 5683250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 9880486 - 9880573
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| |||||||||||||||   |||| ||  || ||||  ||||||||| |||||| |||||||||||  |||||||    
T  9880486 ttaaatatgtttttagtccttacattttgcatccctttgaagaaaagtctctacatttcattaaatgtttttaaaatcctcacatttt 9880573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 19976166 - 19976253
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||| ||||||||||| || ||| ||  |||||| ||||  ||| | |||||| |||||||||||| |||||||    
T  19976166 ttaaatatgtttttagtcgttacattttgcgcttctttgaagaatagttcttattttttattaaatgtttttaaaatccccacatttt 19976253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 33082 - 32994
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||||    ||  || ||||||||||||||||||||||||| |||||||||||||||||||||    
T  33082 ttaaatatgtttttggtccctacattttgcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacattttt 32994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 29276 - 29365
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||| ||||||| |||||||||||    ||  || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29276 ttaaatatgttattggtccctacattttgcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttc 29365  T

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Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 33106931 - 33107022
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| ||| |||||| |   || || || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33106931 ttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 33107022  T

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Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 14712832 - 14712913
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||||||| ||||||||||    ||| || |||||||||||||||||||||||||| ||||||||||||||    
T  14712832 ttaaatatgtttttggtccctacattttgcgtcactttgaaaaatagtccttacatttcaataaatgtttttaaaatcccta 14712913  T

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Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 8710428 - 8710341
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||| ||||||| | |||| ||  |||||||||||||||||| |||||| |||||||||||| |||||||    
T  8710428 ttaaatatgtttttagtccttatattttgcacccctttgaagaatagtccttacatttcattaaatgtttttaaaatccccacatttt 8710341  T

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Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 7646075 - 7645994
Alignment:
Q  143 tagacttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaat 224  Q
    |||| |||||||||||||| ||||||||||||||  |||||| ||  ||||||||||||||||||||||||| ||| |||||    
T  7646075 tagagttaaatatgtttttagtccttacattttgtgctcctttgaagaatagtccttacatttcaataaatgttttaaaaat 7645994  T

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Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 15148236 - 15148145
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    ||||||||||||||||||| || ||||| | |   || ||||| |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  15148236 ttaaatatgtttttggtccctatattttacgcaattttgataa-tagtccctacatttcaataaatgattttaaaatccctacatttttcctt 15148145  T

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Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 211443 - 211530
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||||||||||| | |||| ||  |||||||| ||||||||| |||||| |||||||||||  |||||||    
T  211443 ttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccgtacatttcattaaatgattttaaaatcctcacatttt 211530  T

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Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 5974013 - 5974100
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| ||||||| ||||||| | |||| ||  |||||||| ||||||||| |||||| |||||||||||| |||||||    
T  5974013 ttaaatatgtttttagtccttatattttgcacccctttgaagaatagtccctacatttcattaaatgtttttaaaatccccacatttt 5974100  T

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Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 20824166 - 20824256
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20824166 ttaaatatgtttttggtccctacattttacacgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacatttttcct 20824256  T

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Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 14257624 - 14257574
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcctt 240  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  14257624 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctt 14257574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 6162288 - 6162337
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  6162288 aatagtcattacatttcaataaatgtttttaaaatccctacatttttcct 6162337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 6162780 - 6162688
Alignment:
Q  143 tagacttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    |||| ||||||||||||||||||| |||||||||| |   || || || |||||  |||||||||||||||| |||||||||||||||||||||    
T  6162780 tagagttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtctctacatttcaataaatgtttttaaaatccctacattttt 6162688  T

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Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 14257149 - 14257236
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| |||||||||||||||||||||    
T  14257149 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccctacattttt 14257236  T

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Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 33107448 - 33107361
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| ||||||||||| |||| |||||||||||||||||||||    
T  33107448 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaatgaatgtttttaaaatccctacattttt 33107361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 15147720 - 15147810
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || || ||| |||||||||||||||| ||||||||||||||||||||||||    
T  15147720 ttaaatatgtttttggtccctacattttacgcgatttagagaa-taatccctacatttcaataaatgtttttaaaatccctacatttttcct 15147810  T

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Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 20824682 - 20824594
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    ||||||||||||||||||| |||||||| | |   || || || || ||| |||||||||||||||| ||||||||||||||||||||||    
T  20824682 ttaaatatgtttttggtccctacattttacgcgattttgagaa-taatccctacatttcaataaatgtttttaaaatccctacatttttc 20824594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 34984631 - 34984545
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacattttt 236  Q
    ||||||||||||||||||| |||||||||| |   || || || |||||| |||||||||||||||| ||||||||| |||||||||||    
T  34984631 ttaaatatgtttttggtccctacattttgcgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaat-cctacattttt 34984545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 20228281 - 20228232
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||| | ||||||| |||||||| ||||||||||||||||||||||||    
T  20228281 aatagttcctacattttaataaatgtttttaaaatccctacatttttcct 20228232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 20522202 - 20522157
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||    
T  20522202 aatagtccctacatttcaataaatgtttttaaaatcactacatttt 20522157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 22122265 - 22122216
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||| | ||||||| |||||||| ||||||||||||||||||||||||    
T  22122265 aatagttcctacattttaataaatgtttttaaaatccctacatttttcct 22122216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 20521187 - 20521278
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    |||||||||||| | |||| |||||||||     ||||||  |||||||| || ||||||| ||||| |||||||||||||||| |||||||    
T  20521187 ttaaatatgtttgtagtccctacattttgatgaacttcgaagaatagtccctatatttcaaaaaatgtttttaaaatccctacaattttcct 20521278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 8709676 - 8709601
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatcccta 229  Q
    ||||||||||||||||||| ||||||||||        || ||||||||||||||||| ||||| || ||||||||||||||    
T  8709676 ttaaatatgtttttggtccctacattttgcgt------gagaaatagtccttacattttaataactgtttttaaaatcccta 8709601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 14713094 - 14713028
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatg 214  Q
    ||||||||||||||  | |||||||||||| ||| || ||  |||||||||||||||||| ||||||    
T  14713094 ttaaatatgtttttaattcttacattttgcgctcttttgaagaatagtccttacatttcattaaatg 14713028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 17157921 - 17157856
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaat 213  Q
    |||||||||||||| ||||||||||||||| |  ||| ||  |||||||| ||||||||| |||||    
T  17157921 ttaaatatgtttttagtccttacattttgcgccactttgaagaatagtccctacatttcattaaat 17157856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 19595695 - 19595650
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||| |||||||||||||||  |||||||||||||| |||||    
T  19595695 aatagtccctacatttcaataaatatttttaaaatccctatatttt 19595650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 39939 - 39849
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttttcct 239  Q
    ||||||||||||||||||| |||||||| | |   || || || |||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  39939 ttaaatatgtttttggtccctacattttacgcgattttgagaa-tagtccctacatttcaataaatgtttttaaaatccttacatttttcct 39849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 39464 - 39511
Alignment:
Q  190 aatagtccttacatttcaataaatgcttttaaaatccctacatttttc 237  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  39464 aataatccctacatttcaataaatgtttttaaaatccctacatttttc 39511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 107724 - 107811
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| | ||||||| ||||| |||||| ||  |||||||| |||||||||||||||  |||||||||||  |||||||    
T  107724 ttaaatatgtttttagaccttacactttgcgctcctttgaagaatagtccctacatttcaataaatatttttaaaatcctcacatttt 107811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 107897 - 107974
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatc 225  Q
    ||||||||||||||||||| |||||||| |     || || |||||||||||||||||||||||||| ||||||||||    
T  107897 ttaaatatgtttttggtccctacattttccgtgattttgaaaaatagtccttacatttcaataaatgtttttaaaatc 107974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 25930 - 25843
Alignment:
Q  148 ttaaatatgtttttggtccttacattttgccctccttcgataaatagtccttacatttcaataaatgcttttaaaatccctacatttt 235  Q
    |||||||||||||| |||| |||||||| | ||| || |||||||||||| ||||||| | |||||  ||||||| | | ||||||||    
T  25930 ttaaatatgtttttagtccctacattttacgctcttttgataaatagtccctacatttaagtaaatatttttaaagttcttacatttt 25843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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