View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18235_low_6 (Length: 419)

Name: NF18235_low_6
Description: NF18235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18235_low_6
NF18235_low_6
[»] chr5 (65 HSPs)
chr5 (8-322)||(14625861-14626179)
chr5 (234-419)||(119086-119272)
chr5 (234-419)||(119786-119972)
chr5 (232-419)||(19353069-19353252)
chr5 (232-413)||(19352381-19352561)
chr5 (206-323)||(3191797-3191913)
chr5 (231-324)||(3192230-3192322)
chr5 (202-328)||(4187806-4187932)
chr5 (207-325)||(31162418-31162535)
chr5 (220-321)||(87249-87350)
chr5 (243-324)||(31176505-31176586)
chr5 (232-324)||(39402210-39402301)
chr5 (232-327)||(4186749-4186844)
chr5 (263-358)||(15978525-15978620)
chr5 (239-297)||(3406692-3406750)
chr5 (165-286)||(30351634-30351758)
chr5 (207-324)||(5747167-5747283)
chr5 (220-325)||(18999628-18999733)
chr5 (231-324)||(31093426-31093518)
chr5 (232-324)||(6543413-6543504)
chr5 (246-325)||(18339314-18339393)
chr5 (207-322)||(21949400-21949514)
chr5 (232-323)||(31162852-31162942)
chr5 (232-278)||(119054-119100)
chr5 (232-326)||(119958-120052)
chr5 (220-322)||(8648053-8648155)
chr5 (206-323)||(31588320-31588438)
chr5 (232-281)||(21949831-21949880)
chr5 (207-280)||(28641567-28641640)
chr5 (232-324)||(718224-718316)
chr5 (231-323)||(3879203-3879294)
chr5 (232-324)||(28641159-28641250)
chr5 (232-280)||(39402645-39402693)
chr5 (242-321)||(8750370-8750449)
chr5 (242-321)||(16284275-16284354)
chr5 (232-323)||(19353238-19353329)
chr5 (263-325)||(18339243-18339305)
chr5 (242-324)||(22231170-22231252)
chr5 (255-321)||(30415334-30415400)
chr5 (232-269)||(6543846-6543883)
chr5 (244-321)||(20892557-20892633)
chr5 (272-325)||(35383410-35383463)
chr5 (232-276)||(3878818-3878862)
chr5 (232-324)||(5746759-5746850)
chr5 (206-278)||(19352343-19352415)
chr5 (232-276)||(31093041-31093085)
chr5 (201-321)||(37813376-37813496)
chr5 (215-266)||(14625177-14625228)
chr5 (243-322)||(18340661-18340740)
chr5 (243-325)||(87016-87098)
chr5 (220-322)||(3406459-3406561)
chr5 (243-325)||(8750007-8750089)
chr5 (242-323)||(18999365-18999446)
chr5 (245-325)||(31176677-31176758)
chr5 (371-419)||(6543490-6543538)
chr5 (233-304)||(18339091-18339162)
chr5 (245-322)||(15978389-15978467)
chr5 (275-325)||(26392148-26392197)
chr5 (220-325)||(30415472-30415576)
chr5 (272-325)||(35373618-35373671)
chr5 (233-317)||(3935695-3935779)
chr5 (240-276)||(8647358-8647394)
chr5 (371-419)||(21949475-21949523)
chr5 (371-419)||(28641558-28641606)
chr5 (371-419)||(31162496-31162544)
[»] chr8 (47 HSPs)
chr8 (231-419)||(4624436-4624624)
chr8 (169-325)||(34614015-34614171)
chr8 (239-322)||(44024398-44024481)
chr8 (223-320)||(26720323-26720420)
chr8 (232-320)||(16682533-16682621)
chr8 (166-297)||(36155296-36155430)
chr8 (239-322)||(21005956-21006039)
chr8 (210-325)||(29917516-29917630)
chr8 (220-358)||(6297850-6297988)
chr8 (231-324)||(29917103-29917195)
chr8 (239-358)||(6297599-6297718)
chr8 (220-325)||(6298023-6298128)
chr8 (220-325)||(17914194-17914299)
chr8 (222-322)||(12489517-12489616)
chr8 (233-324)||(36156359-36156451)
chr8 (243-322)||(20682708-20682787)
chr8 (231-325)||(12734170-12734263)
chr8 (233-319)||(26243396-26243482)
chr8 (220-321)||(6297463-6297564)
chr8 (242-323)||(9800038-9800119)
chr8 (206-270)||(4624412-4624476)
chr8 (233-321)||(9800344-9800432)
chr8 (272-352)||(13315345-13315425)
chr8 (220-323)||(13315201-13315304)
chr8 (206-325)||(26997843-26997962)
chr8 (243-321)||(11089133-11089211)
chr8 (232-270)||(12734604-12734642)
chr8 (263-325)||(26997735-26997796)
chr8 (244-325)||(10047476-10047556)
chr8 (165-323)||(40304683-40304845)
chr8 (232-280)||(24846004-24846052)
chr8 (234-325)||(4694434-4694525)
chr8 (220-323)||(17915495-17915597)
chr8 (202-285)||(44148614-44148697)
chr8 (222-323)||(16662167-16662268)
chr8 (244-320)||(10047890-10047966)
chr8 (273-317)||(17915284-17915328)
chr8 (244-319)||(16662483-16662558)
chr8 (239-297)||(10047676-10047734)
chr8 (243-317)||(44024230-44024304)
chr8 (244-310)||(45369134-45369200)
chr8 (166-195)||(6761444-6761473)
chr8 (272-325)||(10047745-10047798)
chr8 (263-300)||(12489391-12489428)
chr8 (232-281)||(20682924-20682973)
chr8 (272-325)||(21005892-21005945)
chr8 (206-286)||(21006096-21006176)
[»] chr2 (66 HSPs)
chr2 (232-373)||(10709424-10709565)
chr2 (232-419)||(10710830-10711016)
chr2 (206-324)||(18107399-18107517)
chr2 (220-325)||(2517410-2517515)
chr2 (232-324)||(39947086-39947178)
chr2 (202-278)||(44930027-44930103)
chr2 (239-322)||(24093329-24093412)
chr2 (220-322)||(2191217-2191319)
chr2 (233-325)||(21217322-21217414)
chr2 (231-323)||(39096523-39096614)
chr2 (206-326)||(39096931-39097050)
chr2 (232-324)||(39945840-39945932)
chr2 (202-278)||(44934653-44934729)
chr2 (244-323)||(21182306-21182385)
chr2 (202-325)||(23222833-23222956)
chr2 (207-325)||(6476084-6476201)
chr2 (233-323)||(21216922-21217012)
chr2 (233-323)||(21264990-21265080)
chr2 (233-323)||(21265390-21265480)
chr2 (207-325)||(27377646-27377763)
chr2 (207-324)||(1804638-1804754)
chr2 (232-325)||(6476518-6476610)
chr2 (207-324)||(11451162-11451278)
chr2 (232-324)||(1804230-1804321)
chr2 (243-323)||(3691400-3691480)
chr2 (231-323)||(3854497-3854588)
chr2 (166-285)||(18105753-18105875)
chr2 (232-324)||(23221832-23221924)
chr2 (233-325)||(39729607-39729699)
chr2 (246-320)||(2191392-2191466)
chr2 (242-324)||(24093154-24093236)
chr2 (233-323)||(32860813-32860903)
chr2 (239-297)||(32861047-32861105)
chr2 (231-324)||(12090125-12090217)
chr2 (231-300)||(34037831-34037899)
chr2 (252-325)||(39600769-39600842)
chr2 (232-276)||(3854112-3854156)
chr2 (210-278)||(10708067-10708135)
chr2 (232-276)||(22701558-22701602)
chr2 (244-324)||(32114483-32114563)
chr2 (233-324)||(7083520-7083611)
chr2 (233-324)||(21267369-21267460)
chr2 (239-321)||(7083756-7083838)
chr2 (232-270)||(12089746-12089784)
chr2 (232-334)||(26525450-26525551)
chr2 (244-288)||(3624925-3624969)
chr2 (232-324)||(11450754-11450845)
chr2 (263-351)||(21217067-21217154)
chr2 (263-351)||(21265248-21265335)
chr2 (223-330)||(2036594-2036701)
chr2 (233-312)||(3691093-3691172)
chr2 (231-322)||(26525894-26525984)
chr2 (232-323)||(27378080-27378170)
chr2 (231-269)||(22701944-22701982)
chr2 (232-325)||(10711002-10711095)
chr2 (68-149)||(18105903-18105984)
chr2 (246-295)||(21217163-21217212)
chr2 (246-295)||(21265190-21265239)
chr2 (233-269)||(2035661-2035697)
chr2 (232-280)||(34038252-34038300)
chr2 (363-419)||(38110366-38110422)
chr2 (349-419)||(44930059-44930129)
chr2 (220-325)||(24093544-24093649)
chr2 (371-419)||(1804629-1804677)
chr2 (371-419)||(6476162-6476210)
chr2 (371-419)||(11451153-11451201)
[»] chr1 (57 HSPs)
chr1 (232-324)||(36793574-36793666)
chr1 (166-325)||(1500911-1501074)
chr1 (239-357)||(3591171-3591289)
chr1 (239-322)||(19895573-19895656)
chr1 (242-324)||(18180288-18180370)
chr1 (207-325)||(40124073-40124190)
chr1 (233-333)||(5683150-5683250)
chr1 (231-331)||(9122676-9122775)
chr1 (207-323)||(47410829-47410944)
chr1 (231-324)||(17968035-17968127)
chr1 (232-325)||(32266480-32266572)
chr1 (232-325)||(40124507-40124599)
chr1 (232-332)||(30427663-30427763)
chr1 (233-324)||(5172743-5172834)
chr1 (233-324)||(9880482-9880573)
chr1 (233-323)||(3591338-3591428)
chr1 (242-324)||(5683571-5683653)
chr1 (202-324)||(45664685-45664807)
chr1 (207-325)||(46802319-46802436)
chr1 (232-325)||(17968468-17968561)
chr1 (232-325)||(32266914-32267006)
chr1 (233-334)||(37717797-37717897)
chr1 (231-324)||(45230560-45230652)
chr1 (232-325)||(47410420-47410512)
chr1 (232-280)||(8997382-8997430)
chr1 (232-280)||(9123116-9123164)
chr1 (232-276)||(45230175-45230219)
chr1 (242-322)||(48154974-48155053)
chr1 (243-323)||(50359124-50359204)
chr1 (220-324)||(50359427-50359531)
chr1 (243-322)||(18180052-18180131)
chr1 (231-322)||(30428104-30428194)
chr1 (243-321)||(48155290-48155368)
chr1 (232-324)||(36792238-36792329)
chr1 (241-324)||(12869663-12869746)
chr1 (255-322)||(50359290-50359357)
chr1 (220-322)||(4288428-4288525)
chr1 (243-297)||(5683359-5683413)
chr1 (220-334)||(18179867-18179981)
chr1 (232-278)||(46802753-46802799)
chr1 (220-324)||(6751341-6751446)
chr1 (247-322)||(5172917-5172993)
chr1 (206-322)||(9880764-9880880)
chr1 (234-286)||(12868469-12868521)
chr1 (220-320)||(19976166-19976266)
chr1 (244-324)||(31436395-31436475)
chr1 (371-419)||(32266558-32266606)
chr1 (263-335)||(42723110-42723182)
chr1 (371-419)||(46802397-46802445)
chr1 (275-317)||(18180149-18180191)
chr1 (290-324)||(42723317-42723351)
chr1 (233-311)||(47541529-47541607)
chr1 (232-281)||(1500100-1500149)
chr1 (272-321)||(19895667-19895716)
chr1 (246-297)||(31436226-31436275)
chr1 (237-269)||(31889487-31889519)
chr1 (371-419)||(40124151-40124199)
[»] chr4 (82 HSPs)
chr4 (232-324)||(54168823-54168915)
chr4 (233-326)||(49424450-49424543)
chr4 (246-356)||(3296683-3296793)
chr4 (202-324)||(47058477-47058599)
chr4 (239-323)||(29691746-29691830)
chr4 (232-324)||(54167492-54167584)
chr4 (233-332)||(17288374-17288473)
chr4 (240-322)||(10580040-10580122)
chr4 (233-322)||(54142325-54142414)
chr4 (202-323)||(54143471-54143592)
chr4 (207-323)||(3296919-3297035)
chr4 (202-278)||(47053805-47053881)
chr4 (206-323)||(28505208-28505324)
chr4 (220-325)||(29691522-29691627)
chr4 (207-323)||(40841461-40841576)
chr4 (242-324)||(38759702-38759784)
chr4 (210-323)||(2669416-2669528)
chr4 (223-280)||(12108280-12108337)
chr4 (207-332)||(28957717-28957841)
chr4 (232-333)||(43979546-43979647)
chr4 (231-324)||(43979988-43980080)
chr4 (232-324)||(2669005-2669096)
chr4 (244-324)||(7118176-7118256)
chr4 (231-323)||(12922641-12922732)
chr4 (232-332)||(31227869-31227968)
chr4 (204-324)||(49426324-49426444)
chr4 (220-324)||(51906807-51906911)
chr4 (233-324)||(17287485-17287576)
chr4 (232-323)||(21235027-21235117)
chr4 (207-322)||(31228285-31228399)
chr4 (231-325)||(789892-789985)
chr4 (246-296)||(1791389-1791439)
chr4 (239-297)||(5545018-5545076)
chr4 (231-325)||(30546145-30546238)
chr4 (242-324)||(41510066-41510148)
chr4 (246-320)||(48554071-48554145)
chr4 (220-321)||(3296544-3296645)
chr4 (207-280)||(38026082-38026155)
chr4 (232-281)||(40841893-40841942)
chr4 (232-276)||(1317106-1317150)
chr4 (165-260)||(7164919-7165017)
chr4 (232-276)||(12923073-12923117)
chr4 (242-322)||(26168165-26168245)
chr4 (232-324)||(28957309-28957400)
chr4 (232-276)||(30545759-30545803)
chr4 (232-276)||(46263066-46263110)
chr4 (220-324)||(48553894-48553998)
chr4 (233-281)||(55347970-55348018)
chr4 (272-323)||(1791320-1791371)
chr4 (263-358)||(3296802-3296897)
chr4 (207-325)||(51906417-51906535)
chr4 (241-322)||(7118002-7118082)
chr4 (220-325)||(30608621-30608726)
chr4 (246-295)||(51906619-51906668)
chr4 (232-325)||(55347558-55347650)
chr4 (232-276)||(790326-790370)
chr4 (220-323)||(48760103-48760206)
chr4 (234-324)||(1317494-1317583)
chr4 (232-278)||(21235461-21235507)
chr4 (246-288)||(35166708-35166750)
chr4 (242-320)||(35469074-35469151)
chr4 (272-325)||(26168259-26168312)
chr4 (220-285)||(34129288-34129353)
chr4 (220-321)||(26168380-26168483)
chr4 (243-323)||(34294451-34294529)
chr4 (232-280)||(38025717-38025765)
chr4 (231-323)||(46262634-46262725)
chr4 (270-324)||(19310785-19310839)
chr4 (263-325)||(30608491-30608553)
chr4 (349-419)||(47058451-47058521)
chr4 (263-325)||(48759973-48760035)
chr4 (263-325)||(51906677-51906739)
chr4 (272-325)||(5544954-5545007)
chr4 (275-344)||(10580137-10580206)
chr4 (232-269)||(28505641-28505678)
chr4 (220-297)||(30608270-30608347)
chr4 (297-325)||(1620914-1620942)
chr4 (242-286)||(1791184-1791228)
chr4 (233-269)||(12107758-12107794)
chr4 (371-419)||(28957708-28957756)
chr4 (371-419)||(31228276-31228324)
chr4 (371-419)||(38026073-38026121)
[»] chr3 (72 HSPs)
chr3 (239-322)||(25770494-25770577)
chr3 (202-278)||(20831071-20831147)
chr3 (206-325)||(4199450-4199568)
chr3 (233-328)||(22814290-22814385)
chr3 (233-324)||(48868588-48868679)
chr3 (220-333)||(44504374-44504487)
chr3 (207-324)||(45539615-45539731)
chr3 (202-278)||(20826772-20826848)
chr3 (207-270)||(35300796-35300859)
chr3 (243-322)||(44504265-44504344)
chr3 (207-280)||(2388673-2388746)
chr3 (231-324)||(34949754-34949846)
chr3 (231-324)||(36899252-36899344)
chr3 (207-280)||(42606321-42606394)
chr3 (232-324)||(4199886-4199977)
chr3 (232-324)||(22406840-22406932)
chr3 (239-322)||(9218348-9218431)
chr3 (239-322)||(37172254-37172337)
chr3 (233-288)||(54588491-54588546)
chr3 (242-324)||(132069-132151)
chr3 (247-321)||(27013583-27013657)
chr3 (231-281)||(51587570-51587620)
chr3 (231-324)||(22407273-22407365)
chr3 (236-325)||(27475387-27475475)
chr3 (232-281)||(45539249-45539298)
chr3 (207-280)||(46689723-46689796)
chr3 (232-325)||(46690113-46690205)
chr3 (233-321)||(9217821-9217909)
chr3 (232-276)||(34950187-34950231)
chr3 (233-325)||(48867647-48867739)
chr3 (232-323)||(7248489-7248580)
chr3 (239-322)||(26741138-26741221)
chr3 (233-324)||(43933438-43933529)
chr3 (220-323)||(51471334-51471437)
chr3 (243-325)||(9218524-9218606)
chr3 (220-322)||(13637768-13637870)
chr3 (180-278)||(33225532-33225634)
chr3 (263-324)||(51471506-51471567)
chr3 (232-280)||(2389063-2389111)
chr3 (233-325)||(25770318-25770410)
chr3 (273-325)||(25770589-25770641)
chr3 (232-276)||(27475729-27475773)
chr3 (232-280)||(36899685-36899733)
chr3 (232-280)||(42606711-42606759)
chr3 (263-325)||(22814466-22814529)
chr3 (220-323)||(34743458-34743561)
chr3 (250-324)||(45728335-45728409)
chr3 (239-297)||(50732379-50732437)
chr3 (239-297)||(50780418-50780476)
chr3 (242-319)||(37172084-37172161)
chr3 (233-286)||(51755915-51755968)
chr3 (220-325)||(26741292-26741393)
chr3 (220-324)||(37172464-37172568)
chr3 (242-318)||(50732229-50732305)
chr3 (242-318)||(50780550-50780626)
chr3 (243-294)||(131948-131999)
chr3 (263-325)||(43933603-43933666)
chr3 (238-297)||(51588471-51588529)
chr3 (349-419)||(20831045-20831115)
chr3 (272-322)||(37172348-37172398)
chr3 (246-308)||(51471576-51471638)
chr3 (233-278)||(3799766-3799811)
chr3 (243-320)||(13637478-13637554)
chr3 (248-325)||(22814597-22814674)
chr3 (220-321)||(43933716-43933816)
chr3 (220-285)||(44504129-44504194)
chr3 (233-278)||(47343726-47343771)
chr3 (297-325)||(8113753-8113781)
chr3 (244-320)||(25770728-25770804)
chr3 (202-266)||(35301863-35301927)
chr3 (232-320)||(38485699-38485787)
chr3 (371-419)||(46689757-46689805)
[»] scaffold0148 (3 HSPs)
scaffold0148 (202-325)||(32964-33087)
scaffold0148 (202-278)||(29318-29394)
scaffold0148 (349-419)||(32938-33008)
[»] chr6 (41 HSPs)
chr6 (233-325)||(8710341-8710433)
chr6 (233-325)||(5974008-5974100)
chr6 (239-322)||(14712830-14712913)
chr6 (207-325)||(14257144-14257261)
chr6 (232-280)||(6162286-6162334)
chr6 (231-321)||(6162687-6162776)
chr6 (231-324)||(33107360-33107452)
chr6 (206-321)||(7645956-7646071)
chr6 (233-323)||(211440-211530)
chr6 (207-280)||(20824205-20824278)
chr6 (245-322)||(21113202-21113279)
chr6 (231-324)||(34984544-34984635)
chr6 (242-330)||(4510180-4510268)
chr6 (232-324)||(14257578-14257669)
chr6 (263-367)||(17157674-17157778)
chr6 (233-285)||(20522157-20522209)
chr6 (232-324)||(20824595-20824686)
chr6 (232-276)||(33106975-33107019)
chr6 (206-269)||(20228209-20228272)
chr6 (206-269)||(22122193-22122256)
chr6 (263-325)||(25932249-25932312)
chr6 (263-325)||(211582-211644)
chr6 (207-269)||(15147770-15147832)
chr6 (232-325)||(15148149-15148241)
chr6 (223-324)||(19579193-19579294)
chr6 (255-323)||(17157856-17157924)
chr6 (250-321)||(14713024-14713095)
chr6 (246-320)||(17157787-17157861)
chr6 (249-322)||(211738-211811)
chr6 (232-325)||(20521182-20521275)
chr6 (233-281)||(19595650-19595698)
chr6 (220-321)||(17157547-17157648)
chr6 (231-320)||(20227059-20227147)
chr6 (346-419)||(20228176-20228249)
chr6 (231-320)||(22121043-22121131)
chr6 (346-419)||(22122160-22122233)
chr6 (371-419)||(6162320-6162368)
chr6 (371-419)||(15147793-15147841)
chr6 (371-419)||(20824239-20824287)
chr6 (244-284)||(21113067-21113107)
chr6 (272-324)||(25932081-25932133)
[»] chr7 (49 HSPs)
chr7 (207-324)||(33847864-33847980)
chr7 (206-322)||(18443176-18443291)
chr7 (232-325)||(18443609-18443701)
chr7 (233-325)||(17075216-17075308)
chr7 (233-324)||(17075618-17075709)
chr7 (231-325)||(28898026-28898119)
chr7 (244-322)||(49053719-49053797)
chr7 (231-324)||(1244442-1244534)
chr7 (239-352)||(20544145-20544258)
chr7 (231-324)||(41298675-41298767)
chr7 (242-297)||(10466640-10466695)
chr7 (242-325)||(16755643-16755725)
chr7 (220-323)||(32092227-32092330)
chr7 (232-323)||(41298243-41298334)
chr7 (243-320)||(20544321-20544398)
chr7 (232-325)||(22954043-22954135)
chr7 (223-280)||(29784370-29784427)
chr7 (232-276)||(884728-884772)
chr7 (232-276)||(1244057-1244101)
chr7 (263-358)||(5029611-5029707)
chr7 (242-322)||(18920079-18920159)
chr7 (243-367)||(28838480-28838604)
chr7 (232-276)||(28898460-28898504)
chr7 (232-324)||(30939564-30939656)
chr7 (246-321)||(5029767-5029842)
chr7 (220-311)||(22948866-22948957)
chr7 (166-282)||(27310087-27310207)
chr7 (220-323)||(28854676-28854779)
chr7 (231-322)||(29783935-29784025)
chr7 (243-325)||(10466790-10466872)
chr7 (263-357)||(32092366-32092460)
chr7 (242-323)||(20543910-20543991)
chr7 (231-304)||(27311047-27311120)
chr7 (231-320)||(30938597-30938686)
chr7 (232-281)||(33848297-33848346)
chr7 (244-321)||(44803644-44803721)
chr7 (263-351)||(17075476-17075563)
chr7 (233-320)||(11974666-11974753)
chr7 (233-323)||(28852692-28852782)
chr7 (246-295)||(17075418-17075467)
chr7 (236-321)||(11974894-11974975)
chr7 (183-325)||(12933008-12933154)
chr7 (272-352)||(22948745-22948825)
chr7 (233-324)||(6621117-6621207)
chr7 (242-321)||(11992715-11992794)
chr7 (239-322)||(23548841-23548924)
chr7 (261-323)||(23548053-23548115)
chr7 (220-325)||(18152753-18152858)
chr7 (233-286)||(42750119-42750172)
[»] scaffold0009 (3 HSPs)
scaffold0009 (243-322)||(107895-107974)
scaffold0009 (210-323)||(107721-107834)
scaffold0009 (275-358)||(107992-108075)
[»] scaffold0085 (2 HSPs)
scaffold0085 (207-324)||(39827-39943)
scaffold0085 (232-269)||(39473-39510)
[»] scaffold0063 (3 HSPs)
scaffold0063 (233-321)||(35193-35281)
scaffold0063 (246-320)||(34794-34868)
scaffold0063 (239-297)||(34990-35048)


Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 8 - 322
Target Start/End: Original strand, 14625861 - 14626179
Alignment:
Q  8 gtgagaagaagaagaaagttgggaaatgaaagatcgtaaaagaggaggaagaagtgggaattagggattggaatcactatgaaatgggttgaatctatgg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14625861 gtgagaagaagaagaaagttgggaaatgaaagatcgtaaaagaggaggaagaagtgggaattagggattggaatcactatgaaatgggttgaatctatgg 14625960  T
Q  108 atcgggtcttattttacctattttgtttgacccaatccattt-nnnnnnnnnnnnnnnttgccacatcaccattctgtttggtgactggacaga---aga 203  Q
    |||||||||||||||||| |||||||||||||||||||||||                ||||||||||||||||||||||||||||||||||||   |||    
T  14625961 atcgggtcttattttacccattttgtttgacccaatccatttaaaaagtagaaaaaaattgccacatcaccattctgtttggtgactggacagaaacaga 14626060  T
Q  204 cggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataagg 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| || |||||| |||||| |||| ||    
T  14626061 cggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtagggactattttttaaagtcgcgcaaagtataggg 14626160  T
Q  304 attaaaaatatatttaacc 322  Q
    |  ||||| ||||||||||    
T  14626161 accaaaaacatatttaacc 14626179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 234 - 419
Target Start/End: Complemental strand, 119272 - 119086
Alignment:
Q  234 aaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc-tagaaaaaa 332  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||  ||||| ||||||||||| || ||||||    
T  119272 aaatgtagggattttaaaaacatttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatatttaacccttaaaaaaaa 119173  T
Q  333 tggagcccactagctgccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    |||   |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||| |  ||||||||||||||||||    
T  119172 tgggatccactagctgccacgtcagcttctcgttaattatttgacagcagagactatttgtgctatcggaggaaaaatgtagggatt 119086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 234 - 419
Target Start/End: Original strand, 119786 - 119972
Alignment:
Q  234 aaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct---agaaaa 330  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||  ||||| |||  |||||||   | ||||    
T  119786 aaatgtagggattttaaaaacatttattgaaatgcaaggactattcttcaaagtcacgcaaaatataaggaccaaaaacata--taacccttaaaaaaaa 119883  T
Q  331 aatggagcccactagctgccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    |||||   ||||||||| ||| |||||||||||||||||||||||||| ||  ||||||||||||||||  |||||||||||| |||||    
T  119884 aatgggatccactagcttccatgtcagcttctcgttaattatttgacagcagagactatttgtgctaacggaggaaaaatgtaaggatt 119972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 232 - 419
Target Start/End: Original strand, 19353069 - 19353252
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc-tagaaaa 330  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||| ||||||  ||||| ||||||||||| || ||||    
T  19353069 aaaaatgtagggattttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggaccaaaaacatatttaacccttaaaaaa 19353168  T
Q  331 aatggagcccactagctgccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||| |   ||||||| |||||||||| ||||||||||||||||||||     |||||||||||||||||  |||||||||||| |||||    
T  19353169 aatcggatccactagttgccacgtcaacttctcgttaattatttgac-----ggactatttgtgctaacggaggaaaaatgtatggatt 19353252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 19352561 - 19352381
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc-tagaaaa 330  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| | ||  | ||| |||  |||||| || ||||    
T  19352561 aaaaatgtagggattttaaaaacatttattgaaatgcaaggactattcttcaaagtcacgcaaaatattaagaccataaacata--taacccttaaaaaa 19352464  T
Q  331 aatggagcccactagctgccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgta 413  Q
     |||  | ||||||||||||| ||||||||||| |||||||||||||| || |||||||||||||||||  ||||||||||||    
T  19352463 tatgtcgtccactagctgccatgtcagcttctctttaattatttgacagcagggactatttgtgctaacggaggaaaaatgta 19352381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 206 - 323
Target Start/End: Complemental strand, 3191913 - 3191797
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggat 305  Q
    |||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||  ||||||| || |||     
T  3191913 gcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgtgcaaaatgtagggac 3191815  T
Q  306 taaaaatatatttaaccc 323  Q
    |||||| |||||||||||    
T  3191814 taaaaacatatttaaccc 3191797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 3192230 - 3192322
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | ||||||||| |||  ||||| ||||||||||||    
T  3192230 aaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgcacaaaatatagggaccaaaaacatatttaaccct 3192322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 4187806 - 4187932
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataa 301  Q
    |||||||||||||| || |  |||| || | |||||||  |||||||||||| |||||||||||||||| ||||||| || |||||  |||||||| ||     
T  4187806 gacggcagggaccaattgtagtaacggaaagaaaatgtgaggattttaaaaatatttattgaaatgtaaggactattatttaaagttgcgcaaaatgtag 4187905  T
Q  302 ggattaaaaatatatttaaccctagaa 328  Q
    ||| |||||| ||||||||||||||||    
T  4187906 ggactaaaaacatatttaaccctagaa 4187932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 31162535 - 31162418
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||| ||||| || |||      
T  31162535 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcacgtaaaatgtagggacc 31162437  T
Q  307 aaaaatatatttaacccta 325  Q
    ||||| |||||||||||||    
T  31162436 aaaaacatatttaacccta 31162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 87249 - 87350
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||||||  |||||||||||||||  || ||||||||||||| |||||| |||||||    
T  87249 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataaggactaaaaacatattta 87348  T
Q  320 ac 321  Q
    ||    
T  87349 ac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 324
Target Start/End: Complemental strand, 31176586 - 31176505
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||| |||||||||  |||| ||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  31176586 gattttaaaaacatttaatgaaatgtatggactgttcttcaaagggacgcaaaatataaggactaaaaacatatttaaccct 31176505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 39402301 - 39402210
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || |||||||| || |||  ||||| ||||||||||||    
T  39402301 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 39402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 327
Target Start/End: Complemental strand, 4186844 - 4186749
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctaga 327  Q
    |||||||||||||| |||||||||||||||||||||||   ||||||||||||||||  || |||| || |||| || || |||||||||||||||    
T  4186844 aaaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaaccctaga 4186749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 263 - 358
Target Start/End: Complemental strand, 15978620 - 15978525
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactagctgccacgtcagc 358  Q
    |||||||| |||||||||||||||||||||||||| || |||| ||||| |||||||| |||| || || |||| ||||||| ||||||| |||||    
T  15978620 aaatgtaaggactattcttcaaagtcacgcaaaatgtagggatcaaaaacatatttaatcctaaaataattggaacccactaactgccacatcagc 15978525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 3406692 - 3406750
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    |||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||    
T  3406692 tagggattttaaaaacatttattgaaatgtaaggactatttttaaaagtcacgcaaaat 3406750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 30351634 - 30351758
Alignment:
Q  165 ttgccacatcaccattctgtttggtgactggacagaag---acggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttatt 261  Q
    ||||||||||||||||||||||||||||||   | ||    || |||||||| ||||||| ||||| |  ||||||||||| |||||||||| |||||||    
T  30351634 ttgccacatcaccattctgtttggtgactgagtataatttaacagcagggactatttatgctaacaaaataaaaatgtaggaattttaaaaatatttatt 30351733  T
Q  262 gaaatgtaatgactattcttcaaag 286  Q
    ||||||||  |||||||||| ||||    
T  30351734 gaaatgtagggactattctttaaag 30351758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 5747167 - 5747283
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||      
T  5747167 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggacc 5747265  T
Q  307 aaaaatatatttaaccct 324  Q
    ||||| ||||||||||||    
T  5747266 aaaaacatatttaaccct 5747283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 18999628 - 18999733
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||| | | |||||||  |||||||||||| ||||| |||||||||  |||||||||||||| | | ||||||| |||||| |||||| |||||||    
T  18999628 tgataacaaagataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaacatattta 18999727  T
Q  320 acccta 325  Q
    ||||||    
T  18999728 acccta 18999733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 31093426 - 31093518
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||| |||||| || |||||||| || |||  ||||| ||||||||||||    
T  31093426 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ttcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 31093518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 6543504 - 6543413
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||  ||||| ||||||||||||    
T  6543504 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccct 6543413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 18339314 - 18339393
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||| |||||||| || ||||||||||| | ||| ||||| ||||||  |||||||||||||||||||    
T  18339314 tttaaaaacatttattaaaatgtaaggattattcttcaaaataacgtaaaatgtaaggaccaaaaatatatttaacccta 18339393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 21949514 - 21949400
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||      
T  21949514 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggacc 21949416  T
Q  307 aaaaatatatttaacc 322  Q
    ||||| ||||||||||    
T  21949415 aaaaacatatttaacc 21949400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 323
Target Start/End: Original strand, 31162852 - 31162942
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| ||||| || || ||||| || |||  ||||| |||||||||||    
T  31162852 aaaaatgtagggattttaaaaacatttattgaaatgtaaggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 31162942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 119100 - 119054
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  119100 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 119054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 119958 - 120052
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctag 326  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||    ||||||| || |||  ||||| ||||||||||||||    
T  119958 aaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatttgtcaaagaagggcaaaatgtagggaccaaaaacatatttaaccctag 120052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 8648053 - 8648155
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || |||||||||  |||||||||||| ||||| |||||||||| ||||||||||| ||   ||||||||| |||||| |||||  |||||||    
T  8648053 tgataacggagaaaaaatgtgaggattttaaaaatatttaatgaaatgtaaagactattcttccaaaggacgcaaaatgtaaggactaaaatcatattta 8648152  T
Q  320 acc 322  Q
    |||    
T  8648153 acc 8648155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 31588320 - 31588438
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaa-gtcacgcaaaatataagga 304  Q
    |||||||| | || ||||||| || | |||||||  |||||||||||| ||||| |||||||||  |||||||||||||| |  ||||||||| ||||||    
T  31588320 gcagggactaattttgataacggagataaaatgttaggattttaaaaatatttaatgaaatgtagggactattcttcaaaggggacgcaaaatgtaagga 31588419  T
Q  305 ttaaaaatatatttaaccc 323  Q
     |||||| |||||||||||    
T  31588420 ctaaaaacatatttaaccc 31588438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 21949831 - 21949880
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattctt 281  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  21949831 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctt 21949880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 28641567 - 28641640
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  28641567 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 28641640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 718224 - 718316
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||| |||||||||||||||||||||||||||||||  |||||| |||||| | | ||||||| || | |  ||||| ||||||||||||    
T  718224 aaaaatgcagggattttaaaaacatttattgaaatgtaagaactattattcaaaattatgcaaaatgtaggaaccaaaaacatatttaaccct 718316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 3879203 - 3879294
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||||| ||||||||||||||||||| |||||||||||  || ||||| ||||| || |||||||| || |||  |||||||||||||||||    
T  3879203 aaaaaatatagggattttaaaaacattcattgaaatgtagggattattc-tcaaaatcgcgcaaaatgtagggaccaaaaatatatttaaccc 3879294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 28641250 - 28641159
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||| ||||| || || ||||| || |||  ||||| ||||||||||||    
T  28641250 aaaaatgtagggattttaaaaacatttattgaaatgtagggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccct 28641159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 39402645 - 39402693
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  39402645 aaaaatgtagggattttaaaaatatttattgaaatgtaaggactattct 39402693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 8750370 - 8750449
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||||| ||||||| | |||||||  |||||||||||||||  ||||||||| |||||| |||||| |||||||||    
T  8750370 ggattttaaacacatttaataaaatgtagggactattcttcaaagaaacgcaaaatgtaaggactaaaaacatatttaac 8750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 16284354 - 16284275
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||||||||||||| | |||| ||| ||||||||||||||   ||||||||| |||||| |||||| |||||||||    
T  16284354 ggattttaaaaacatttaataaaatataaagactattcttcaaaaaaacgcaaaatgtaaggactaaaaacatatttaac 16284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 323
Target Start/End: Original strand, 19353238 - 19353329
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||  |||||     |||||||||| |||  |||||||||||||||||    
T  19353238 aaaaatgtatggattttaaaaacgtttattgaaatgtaaggactatttatcaaatgatggcaaaatatagggaccaaaaatatatttaaccc 19353329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 18339305 - 18339243
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||| ||||| |||||||||||||||||||| ||||||| ||||| |||||||| ||||    
T  18339305 aaatgtaaggactactcttcaaagtcacgcaaaatgtaaggatcaaaaacatatttaatccta 18339243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 22231170 - 22231252
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||| ||||||||||| |||||| ||  |||||||||| ||||   ||||||||||||||| |||||| ||||||||||||    
T  22231170 ggatttcaaaaacatttaatgaaatatagggactattctttaaaggggcgcaaaatataaggactaaaaacatatttaaccct 22231252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 30415334 - 30415400
Alignment:
Q  255 atttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    ||||||| ||||||||||| |||||||||||||||| |||||| || |||| ||||| |||||||||    
T  30415334 atttattaaaatgtaatgattattcttcaaagtcacacaaaatttagggatcaaaaacatatttaac 30415400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 6543846 - 6543883
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgta 269  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6543846 aaaaatgtagggattttaaaaacatttattgaaatgta 6543883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 20892557 - 20892633
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||||||||||| | ||| |||  |||||||||||||| | ||||||||| ||||||||||||| |||||||||    
T  20892557 attttaaaaacatttaattaaacgtagagactattcttcaaa-tgacgcaaaatttaaggattaaaaacatatttaac 20892633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 35383463 - 35383410
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||||||||||| || |||| ||||| |||||||||||||    
T  35383463 gactattcttcaaagtcacgcaaaatgtagggatcaaaaacatatttaacccta 35383410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 3878862 - 3878818
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    |||||| |||||||||||||||||||||||||||||||| |||||    
T  3878862 aaaaatatagggattttaaaaacatttattgaaatgtaaggacta 3878818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 5746850 - 5746759
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||| ||||||||||||||||||||  || ||||| ||||| || || ||||| || |||  ||||| ||||||||||||    
T  5746850 aaaaatgtagggatttttaaaacatttattgaaatgtagggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccct 5746759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 19352415 - 19352343
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||||||| |||| || |||| ||  ||||||||| | ||||||||||||||||||||||||||| |||||||    
T  19352415 gcagggactatttgtgctaacggaggaaaaatgtaagaattttaaaaacatttattgaaatgtaaggactatt 19352343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 31093085 - 31093041
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  31093085 aaaaatgtagggattttaaaaacatctattgaaatgtaaggacta 31093041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 321
Target Start/End: Complemental strand, 37813496 - 37813376
Alignment:
Q  201 agacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatata 300  Q
    ||||||||||||||| || || |||| |   |||||| |||| |||||||||||| ||| |||||||||  |||||||||||||| |  || ||| | ||    
T  37813496 agacggcagggaccaattttgttaacggtggaaaaatttaggaattttaaaaacacttaatgaaatgtatggactattcttcaaaatggcgtaaactgta 37813397  T
Q  301 aggattaaaaatatatttaac 321  Q
     ||| ||||||||||||||||    
T  37813396 gggactaaaaatatatttaac 37813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 14625228 - 14625177
Alignment:
Q  215 atttatgataacagataaaaaatgtagggattttaaaaacatttattgaaat 266  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||| ||||    
T  14625228 atttatgataacggaggaaaaatgtagggattttaaaaacatttattaaaat 14625177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 322
Target Start/End: Original strand, 18340661 - 18340740
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||   ||||| || |||||| |||||  ||||||||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggactattcttaaaaggggcgcaacatgtaaggactaaaatcatatttaacc 18340740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 87098 - 87016
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||| |||||||||  |  ||||||||| |   ||||||||||||| || |||||| |||||||||||||    
T  87098 gattttaaaaacatttaatgaaatgtaggggttattcttcagatgaacgcaaaatataaagactaaaaacatatttaacccta 87016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 3406561 - 3406459
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||| | ||||| || |||||||||||||||||| |||||| ||   ||||||||||  ||  |||||| || |||||||||||||  ||||||    
T  3406561 tgataacagagataaaatataaggattttaaaaacatttaatgaaatatatgaactattcttcgtagagacgcaatatttaaggattaaaaacctattta 3406462  T
Q  320 acc 322  Q
    |||    
T  3406461 acc 3406459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 8750089 - 8750007
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||| ||||| |||||||||  || |||| |||||||   |||||||| |||| |||||||| |||||||||||||    
T  8750089 gattttaaaaatatttaatgaaatgtagggattattattcaaaggggcgcaaaatgtaagaattaaaaacatatttaacccta 8750007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 323
Target Start/End: Complemental strand, 18999446 - 18999365
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||||| ||||| |||||||||  ||||||||||||||     ||||||| |||||| |||||| |||||||||||    
T  18999446 ggattttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaaacatatttaaccc 18999365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 31176758 - 31176677
Alignment:
Q  245 ttttaaaaacattta-ttgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||  || |||||||| ||||||||||||||||||||| |||| || |||  ||||| |||||||| ||||    
T  31176758 ttttaaaaacattttcttaaaatgtaaggactattcttcaaagtcacgcgaaatgtagggaccaaaaacatatttaatccta 31176677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 6543538 - 6543490
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    |||||||||||||||||||||  ||||||  ||||||||||||||||||    
T  6543538 atttgacaacaaggactatttacgctaacggaggaaaaatgtagggatt 6543490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 18339162 - 18339091
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataagga 304  Q
    |||||||  |||||||||||||||||| |||||| ||  |||||||||||||||   |||||||| ||||||    
T  18339162 aaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaaggggcgcaaaatgtaagga 18339091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 15978467 - 15978389
Alignment:
Q  245 ttttaaaaacatttattgaaatgtaatgactattcttc-aaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||||||| |||||| ||  ||||||||||| |||   || ||||||||||||| |||||| ||||||||||    
T  15978467 ttttaaaaacatttaatgaaatatagagactattcttccaaaaaaacacaaaatataaggactaaaaacatatttaacc 15978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 26392148 - 26392197
Alignment:
Q  275 tattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||||||||||| |||   ||||||||||||||||||    
T  26392148 tattcttcaaagtcacgcaaaatataggga-ccaaaatatatttaacccta 26392197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 30415472 - 30415576
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||| || ||||||||  ||||||||||| |||   || ||||| |||||| |||||  |||||||    
T  30415472 tgataacggagacaaaatgtgaggattttaaaaacattaat-gaaatgtagggactattcttcgaaggagcgtaaaatgtaaggactaaaaccatattta 30415570  T
Q  320 acccta 325  Q
    ||||||    
T  30415571 acccta 30415576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 35373671 - 35373618
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||| ||||||||| || |||  ||||| |||||||||||||    
T  35373671 gactattcttcaaagttacgcaaaatgtagggaccaaaaacatatttaacccta 35373618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 3935695 - 3935779
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatt 317  Q
    |||||||  |||||||||||||| ||| |||||||||  || ||||||||||||   || |||||  ||||| ||||||||||||    
T  3935695 aaaatgtgaggattttaaaaacaattaatgaaatgtagggattattcttcaaaggagcgtaaaatgaaaggactaaaaatatatt 3935779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 8647358 - 8647394
Alignment:
Q  240 agggattttaaaaacatttattgaaatgtaatgacta 276  Q
    |||||||||||||||||||||||||||| || |||||    
T  8647358 agggattttaaaaacatttattgaaatgcaaggacta 8647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 21949523 - 21949475
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  21949523 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 21949475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 28641558 - 28641606
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  28641558 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 28641606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 31162544 - 31162496
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  31162544 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 31162496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 231 - 419
Target Start/End: Complemental strand, 4624624 - 4624436
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaa 330  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||  ||||| ||||||||||||  |||     
T  4624624 aaaaaatgtagggattttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaacccttaaaag 4624525  T
Q  331 aatggagcccactagctgccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||| | |||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||  ||||||||||||||||||    
T  4624524 aatggggtccactagctgccacgtcaacttctcgttaattatttgacagcagggactatttgtgctaacggaggaaaaatgtagggatt 4624436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 169 - 325
Target Start/End: Complemental strand, 34614171 - 34614015
Alignment:
Q  169 cacatcaccattctgtttggtgactggacagaa---gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaa 265  Q
    ||||||||||||| ||||| |||||||| ||||   ||| | |||||| |||||||| |||| |  ||||||||| | ||||||||||||||||||||||    
T  34614171 cacatcaccattccgtttgatgactggatagaaattgacag-agggactatttatgacaacatagtaaaaatgtaag-attttaaaaacatttattgaaa 34614074  T
Q  266 tgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||| |||||||||||||||||| |||||||| ||| ||| || || |||||||||||||    
T  34614073 tgta-tgactattcttcaaagtcgcgcaaaatgtaaagatcaataacatatttaacccta 34614015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 44024481 - 44024398
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||  ||||| ||||||||||    
T  44024481 tagggattttaaaaatatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaacc 44024398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 26720420 - 26720323
Alignment:
Q  223 taacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||||  |||||||||||||||   |||||||| || ||| |||||||||||||||    
T  26720420 taacagagaaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtagggactaaaaatatatttaa 26720323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 16682621 - 16682533
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||  ||||| ||||||||    
T  16682621 aaaaatgtaagaattttaaaaacattttttgaaatgtaatgactattctttaaagtcgcgcaaaatataatgaccaaaaacatatttaa 16682533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 297
Target Start/End: Complemental strand, 36155430 - 36155296
Alignment:
Q  166 tgccacatcaccattctgtttggtgactggacagaa---gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattg 262  Q
    |||||| ||| |||||||||||||||||||  ||||   |||||| ||||| ||| |||||||| ||  ||||||||| ||||||||||||||||||||     
T  36155430 tgccacgtcagcattctgtttggtgactgggaagaaattgacggcggggactattaatgataacggagtaaaaatgtaaggattttaaaaacatttatta 36155331  T
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    |||||||  ||||||| ||||||||| | ||||||    
T  36155330 aaatgtagggactattattcaaagtcgcacaaaat 36155296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 21005956 - 21006039
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||| || |||  ||||| ||||||||||    
T  21005956 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagccacgcaaaatgtagggaccaaaaacatatttaacc 21006039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 325
Target Start/End: Original strand, 29917516 - 29917630
Alignment:
Q  210 ggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaa 309  Q
    |||| ||||| | |||| || |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||  ||||||| || |||  |||    
T  29917516 ggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgtgcaaaatgtagggaccaaa 29917614  T
Q  310 aatatatttaacccta 325  Q
    || |||||||||||||    
T  29917615 aacatatttaacccta 29917630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 220 - 358
Target Start/End: Original strand, 6297850 - 6297988
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| || |||  ||||| ||| |||    
T  6297850 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacgaaaaacataatta 6297949  T
Q  320 accctagaaaaaatggagcccactagctgccacgtcagc 358  Q
     ||||| || || |||  |||| || ||||||| |||||    
T  6297950 tccctaaaataattgggacccattaactgccacatcagc 6297988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 29917195 - 29917103
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || |||||||  || |||| ||||| ||||||||||||    
T  29917195 aaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgcaaaacgtagggatcaaaaacatatttaaccct 29917103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 358
Target Start/End: Complemental strand, 6297718 - 6297599
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagc 338  Q
    ||||||||||||||||||||||||||||||||  |||| | |||||||||||||||||| ||  ||  ||||| |||||||||| || || || |||  |    
T  6297718 tagggattttaaaaacatttattgaaatgtaaaaactaattttcaaagtcacgcaaaatgtacagacaaaaaacatatttaaccttaaaataattgggac 6297619  T
Q  339 ccactagctgccacgtcagc 358  Q
    |||||| ||||||| |||||    
T  6297618 ccactaactgccacatcagc 6297599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 6298023 - 6298128
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||||||| |||||||||||||||  | ||||||| |||| | |||||| | |||||    
T  6298023 tgataacggaaataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagggaagcaaaatgtaagcactaaaaacacattta 6298122  T
Q  320 acccta 325  Q
    ||||||    
T  6298123 acccta 6298128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 17914299 - 17914194
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||| | |||||||  |||||||||||||||||| | |||||||  |||||||||||||||  ||||||||| ||| || | |||| |||||||    
T  17914299 tgataacagagataaaatgtgaggattttaaaaacatttaataaaatgtagggactattcttcaaagagacgcaaaatgtaaagacttaaaacatattta 17914200  T
Q  320 acccta 325  Q
    ||||||    
T  17914199 acccta 17914194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 322
Target Start/End: Original strand, 12489517 - 12489616
Alignment:
Q  222 ataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||| | |||||||| |||||||||||||||| || ||||||||| |||||||||||| |   ||||||||| |||||| |||||| |||||||||    
T  12489517 ataacagagataaaatgtaaggattttaaaaacattaat-gaaatgtaaggactattcttcataacgacgcaaaatgtaaggactaaaaacatatttaac 12489615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 36156359 - 36156451
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataagg-attaaaaatatatttaaccct 324  Q
    |||||||| |||||||||||||||||||||||||| || ||||||| ||||||||| |  ||||||||||| |  ||||| ||||||||||||    
T  36156359 aaaatgtaaggattttaaaaacatttattgaaatgcaaagactattattcaaagtcgcataaaatataaggaaccaaaaacatatttaaccct 36156451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 20682787 - 20682708
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||| |||  || || ||||||||||    
T  20682787 gattttaaaaacatttattaaaatgtaaggactattcttcaaagtcgcgctaaatatagggaccaataagatatttaacc 20682708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 325
Target Start/End: Complemental strand, 12734263 - 12734170
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||| ||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| |||||||||||||    
T  12734263 aaaaaatgtagggattttaaaaatattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacccta 12734170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 319
Target Start/End: Original strand, 26243396 - 26243482
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||  |||||||||||||||||| |||||| ||  |||||||||||||||   ||||||||||||||| |||||| |||||||    
T  26243396 aaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaaggagcgcaaaatataaggactaaaaacatattta 26243482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 6297564 - 6297463
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||| | |||||||  |||||||||||||||||| |||||||||   ||||||||||||||   |||||||| |||||| |||| | |||||||    
T  6297564 tgataacagagagaaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaaggggcgcaaaatgtaaggactaaagacatattta 6297465  T
Q  320 ac 321  Q
    ||    
T  6297464 ac 6297463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 323
Target Start/End: Complemental strand, 9800119 - 9800038
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||||||||||| | |||||||| || ||||||||||||   |||||||| |||||| |||||| |||||||||||    
T  9800119 ggattttaaaaacatttaataaaatgtaaggattattcttcaaagaggcgcaaaatctaaggactaaaaacatatttaaccc 9800038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 4624476 - 4624412
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaa 270  Q
    |||||||| |||| || |||| ||  |||||||||||||||||||||||||||||||||||||||    
T  4624476 gcagggactatttgtgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaa 4624412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 321
Target Start/End: Original strand, 9800344 - 9800432
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||| |||||||||||||||||| |||||| ||  |||||||||||||||   ||||||||  |||||  |||||||||||||||    
T  9800344 aaaatgtaaggattttaaaaacatttaatgaaatatatggactattcttcaaaggggcgcaaaatgcaaggaccaaaaatatatttaac 9800432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 13315425 - 13315345
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactagctgccac 352  Q
    |||||||||||||||||||||||||| || ||| |||||| ||||||||||||| || || |||  ||||||| |||||||    
T  13315425 gactattcttcaaagtcacgcaaaatgtagggactaaaaacatatttaaccctaaaataattgggacccactaactgccac 13315345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 323
Target Start/End: Complemental strand, 13315304 - 13315201
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||| | |||||||   ||||||||||||||||| |||||||||  |||||||||| |||    |||||||| |||||| |||||| |||||||    
T  13315304 tgataacagagataaaatgtgatgattttaaaaacatttaatgaaatgtagggactattctttaaatgggcgcaaaatgtaaggactaaaaacatattta 13315205  T
Q  320 accc 323  Q
    ||||    
T  13315204 accc 13315201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 26997843 - 26997962
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggat 305  Q
    |||||||| | || ||||||| || | |||||||  |||||||||||| | ||| |||||||||  ||||||||||||||   ||||||||| |||| |     
T  26997843 gcagggactaattttgataacggagataaaatgtgaggattttaaaaataattaatgaaatgtatggactattcttcaaatggacgcaaaatgtaagaac 26997942  T
Q  306 taaaaatatatttaacccta 325  Q
    |||||| |||||||||||||    
T  26997943 taaaaacatatttaacccta 26997962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 11089133 - 11089211
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||  ||||| || |||  ||||| |||||||||    
T  11089133 gattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacataaaatgtatggaccaaaaacatatttaac 11089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 12734604 - 12734642
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaa 270  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12734604 aaaaatgtagggattttaaaaacatttattgaaatgtaa 12734642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 26997796 - 26997735
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||| ||||||||||||||||||||||||||||| |||  ||||| |||||||||||||    
T  26997796 aaatgtaaggactattcttcaaagtcacgcaaaatataggga-aaaaaacatatttaacccta 26997735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 10047556 - 10047476
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||| |||| ||||  ||||||||||||||    |||||||| ||||||||||||| |||||||||||||    
T  10047556 attttaaaaacatttaatgaa-tgtagggactattcttcaaaagggcgcaaaatgtaaggattaaaaacatatttaacccta 10047476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 323
Target Start/End: Complemental strand, 40304845 - 40304683
Alignment:
Q  165 ttgccacatcaccattctgtttggtgactggacagaa----gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttat 260  Q
    |||||| |||| || || ||||||||||||||||| |    |||||||||||| |  | || ||||||||| |||||||  |||||||||||| |||||     
T  40304845 ttgccaaatcaacaatccgtttggtgactggacaggaaattgacggcagggactaaatttggtaacagatataaaatgtgaggattttaaaaatatttac 40304746  T
Q  261 tgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    | |||||||  |||||||  ||||||    ||||||| || ||| ||||||||||||||||||    
T  40304745 ttaaatgtatggactatttatcaaaggagtgcaaaatgtagggactaaaaatatatttaaccc 40304683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 24846052 - 24846004
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  24846052 aaaaatataggaattttaaaaacatttattgaaatgtaaggactattct 24846004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 325
Target Start/End: Original strand, 4694434 - 4694525
Alignment:
Q  234 aaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||||||||||| | |||||||  |||||||  |||||    || |||||||| ||| |||||| |||||||||||||    
T  4694434 aaatgtagggattttaaaaacatttacttaaatgtagggactatttatcaaaagagcgtaaaatatagggactaaaaacatatttaacccta 4694525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 17915495 - 17915597
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||| | |||||||  |||||| ||||||||||| | |||||||| || ||||||||||||   | |||||| |||||| |||||| |||||||    
T  17915495 tgataacagagataaaatgtgaggatttaaaaaacatttaataaaatgtaagga-tattcttcaaaggagcacaaaatgtaaggactaaaaacatattta 17915593  T
Q  320 accc 323  Q
    ||||    
T  17915594 accc 17915597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 44148697 - 44148614
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaa 285  Q
    ||||| |||||| |||| ||||||| ||  ||||||||  ||||||||||||| |||||| |||||||  ||||||||||||||    
T  44148697 gacggtagggactatttttgataacggagtaaaaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaa 44148614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 323
Target Start/End: Complemental strand, 16662268 - 16662167
Alignment:
Q  222 ataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||| | |||||||  | |||||||||||||||| |||||||||  |||||||||||||||   |||||||| |||| | |||||  ||| |||||    
T  16662268 ataacagagataaaatgtgagaattttaaaaacatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtaagaactaaaatcataattaac 16662169  T
Q  322 cc 323  Q
    ||    
T  16662168 cc 16662167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 10047890 - 10047966
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    |||||||||| ||||| ||| || ||| |||||||||||||||    | ||||| ||||||||||||||||||||||    
T  10047890 attttaaaaatatttaatgatatataaagactattcttcaaaggagtggaaaatgtaaggattaaaaatatatttaa 10047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 17915328 - 17915284
Alignment:
Q  273 actattcttcaaagtcacgcaaaatataaggattaaaaatatatt 317  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||    
T  17915328 actattcttcaaagtcacgcaaaatgtaaggatcaaaaacatatt 17915284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 16662483 - 16662558
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||||||||| |||||||||   |||||||||||||    |||||||| |||||| |||||| |||||||    
T  16662483 attttaaaaacatttaatgaaatgtaggaactattcttcaaaagagcgcaaaatgtaaggactaaaaacatattta 16662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 10047734 - 10047676
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    ||||||||||||||||||||| ||||||| || ||||||| |||| | ||| |||||||    
T  10047734 tagggattttaaaaacatttagtgaaatgcaaggactatttttcagaatcatgcaaaat 10047676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 44024304 - 44024230
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatt 317  Q
    ||||||||||||||||  |||||||||  ||||||||||||||     ||||||| |||||| ||||||||||||    
T  44024304 gattttaaaaacatttggtgaaatgtatggactattcttcaaatgagtgcaaaatttaaggactaaaaatatatt 44024230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 45369134 - 45369200
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaa 310  Q
    ||||||||||||||||||||||||||| || |||| || ||||   | ||||||||||||| |||||    
T  45369134 attttaaaaacatttattgaaatgtaaggattattttttaaaggagcacaaaatataaggactaaaa 45369200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 6761444 - 6761473
Alignment:
Q  166 tgccacatcaccattctgtttggtgactgg 195  Q
    ||||||||||||||||||||||||||||||    
T  6761444 tgccacatcaccattctgtttggtgactgg 6761473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 10047745 - 10047798
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||||| |||||||| |||  ||||| |||||||| ||||    
T  10047745 gactattcttcaaagtcacgaaaaatatagggaccaaaaacatatttaaaccta 10047798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 12489391 - 12489428
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatata 300  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  12489391 aaatgtaaggactactcttcaaagtcacgcaaaatata 12489428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 20682924 - 20682973
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattctt 281  Q
    |||||||| | ||||||||||||||||||| |||||||| ||| ||||||    
T  20682924 aaaaatgtggagattttaaaaacatttattaaaatgtaaggaccattctt 20682973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 21005945 - 21005892
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||| | ||||||| || |||  |||||||||||||||||||    
T  21005945 gactattcttcaaagttatgcaaaatgtagggaccaaaaatatatttaacccta 21005892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 286
Target Start/End: Original strand, 21006096 - 21006176
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaag 286  Q
    ||||||| || || ||||||| || | |||||||  |||||||||||||||||| | |||||||  ||||||| |||||||    
T  21006096 gcagggatcaattttgataacggagataaaatgtgaggattttaaaaacatttaataaaatgtagggactatttttcaaag 21006176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 6e-41; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 232 - 373
Target Start/End: Complemental strand, 10709565 - 10709424
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaa 331  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||  ||||| ||||||||||||  |||||    
T  10709565 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattcttcaaaatcacgcaaaatctaaagaccaaaaacatatttaacccttaaaaaa 10709466  T
Q  332 atggagcccactagctgccacgtcagcttctcgttaattatt 373  Q
    ||||    |||||||||||| |||||||||||||||||||||    
T  10709465 atgggattcactagctgccatgtcagcttctcgttaattatt 10709424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 232 - 419
Target Start/End: Original strand, 10710830 - 10711016
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc-tagaaaa 330  Q
    ||||||||||| |||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||  ||||| |||  |||||| || ||||    
T  10710830 aaaaatgtaggaattttaaaaacatttattgaaatgcaagggctattcttcaaagtcacgcaaaatataaggaccaaaaacata--taacccttaaaaaa 10710927  T
Q  331 aatggagcccactagctgccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||| | ||| ||||||||| | ||| |||||||||||||||||| |  | |||||||||||||||||   ||||||||||| |||||    
T  10710928 aatggggtccattagctgccatgccagtttctcgttaattatttgatagtagggactatttgtgctaacgggggaaaaatgtaaggatt 10711016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 206 - 324
Target Start/End: Original strand, 18107399 - 18107517
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggat 305  Q
    ||||| ||||||||||||||| ||  |||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||||||||||||  | |||     
T  18107399 gcaggaaccatttatgataacggaggaaaaatttagggattttaaaaacatttattaaaatgtaaggattattctttaaagtcacgcaaaatgcagggac 18107498  T
Q  306 taaaaatatatttaaccct 324  Q
    |||||| ||||||||||||    
T  18107499 taaaaacatatttaaccct 18107517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 2517515 - 2517410
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||||||  |||||||||||||||  ||||||||| |||||| ||||||||||||||    
T  2517515 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacgcaaaatgtaaggactaaaaatatattta 2517416  T
Q  320 acccta 325  Q
    ||||||    
T  2517415 acccta 2517410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 39947086 - 39947178
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| || |||  ||||| ||||||||||||    
T  39947086 aaaaatgtacggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgtagggaccaaaaacatatttaaccct 39947178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 44930103 - 44930027
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||||||||||| |||| || |||| |||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  44930103 gacggcagggactatttgtgctaacggataaaaaatgtagggattttaaaaatatttattgaaatgtaaggactatt 44930027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 24093412 - 24093329
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||||||||| |||||| || |||| ||||| ||||||||||    
T  24093412 tagggattttaaaaacatttattgaaatgcaaggactatttttcaaagtcactcaaaatgtagggatcaaaaacatatttaacc 24093329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 2191319 - 2191217
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||||||| |||||||||||||||   |||||||| |||||| |||||| |||||||    
T  2191319 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatattta 2191220  T
Q  320 acc 322  Q
    |||    
T  2191219 acc 2191217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 21217322 - 21217414
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||  |||||||||||||||||| |||||||||  |||||||||||||||   |||||||| |||||| |||||| |||||||||||||    
T  21217322 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaacccta 21217414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 39096614 - 39096523
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| || | ||||||||| |||  ||||| |||||||||||    
T  39096614 aaaaaatgtatggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgcacaaaatatagggaccaaaaacatatttaaccc 39096523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 326
Target Start/End: Original strand, 39096931 - 39097050
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggat 305  Q
    |||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||  ||||||| || |||     
T  39096931 gcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggattattc-tcaaaatcgtgcaaaatgtagggac 39097029  T
Q  306 taaaaatatatttaaccctag 326  Q
     ||||| ||||||||||||||    
T  39097030 caaaaacatatttaaccctag 39097050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 39945932 - 39945840
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| |  |||  ||||| ||||||||||||    
T  39945932 aaaaatataaggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgttgggaccaaaaacatatttaaccct 39945840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 44934653 - 44934729
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||||||||||| |||| || | || ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  44934653 gacggcagggactatttgtgctgacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 44934729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 323
Target Start/End: Complemental strand, 21182385 - 21182306
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||||||||| |||||||||| |||||||||||||||   |||||||| |||||| |||||| |||||||||||    
T  21182385 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaaccc 21182306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 325
Target Start/End: Original strand, 23222833 - 23222956
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataa 301  Q
    |||||||||||||| || |  |||| || | |||||||  ||||||||||||||| ||||||||||||| ||||||| || |||||  |||||||| ||     
T  23222833 gacggcagggaccaattgtagtaacggaaagaaaatgtgaggattttaaaaacatatattgaaatgtaaggactattatttaaagttgcgcaaaatgtag 23222932  T
Q  302 ggattaaaaatatatttaacccta 325  Q
    ||| |||||| |||||||||||||    
T  23222933 ggactaaaaacatatttaacccta 23222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 6476201 - 6476084
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||      
T  6476201 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggacc 6476103  T
Q  307 aaaaatatatttaacccta 325  Q
    ||||| |||||||||||||    
T  6476102 aaaaacatatttaacccta 6476084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 323
Target Start/End: Complemental strand, 21217012 - 21216922
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||  |||||||||||||||||| |||||||||  |||||||||||||||   |||||||| |||||| |||||| |||||||||||    
T  21217012 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaaccc 21216922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 323
Target Start/End: Complemental strand, 21265080 - 21264990
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||  |||||||||||||||||| |||||||||  |||||||||||||||   |||||||| |||||| |||||| |||||||||||    
T  21265080 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaaccc 21264990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 323
Target Start/End: Original strand, 21265390 - 21265480
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||  |||||||||||||||||| |||||||||  |||||||||||||||   |||||||| |||||| |||||| |||||||||||    
T  21265390 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaaccc 21265480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 27377763 - 27377646
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||      
T  27377763 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggacc 27377665  T
Q  307 aaaaatatatttaacccta 325  Q
    ||||| |||||||||||||    
T  27377664 aaaaacatatttaacccta 27377646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 1804638 - 1804754
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||      
T  1804638 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggacc 1804736  T
Q  307 aaaaatatatttaaccct 324  Q
    ||||| ||||||||||||    
T  1804737 aaaaacatatttaaccct 1804754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 6476518 - 6476610
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||  ||||| |||||||||||||    
T  6476518 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 6476610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 11451162 - 11451278
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||      
T  11451162 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggacc 11451260  T
Q  307 aaaaatatatttaaccct 324  Q
    ||||| ||||||||||||    
T  11451261 aaaaacatatttaaccct 11451278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 1804321 - 1804230
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||  ||||| ||||||||||||    
T  1804321 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccct 1804230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 3691400 - 3691480
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||||||||||||||| |||||||||  |||||||||||||||   ||||||||| ||||| |||||| |||||||||||    
T  3691400 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaaatacaaggactaaaaacatatttaaccc 3691480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 3854497 - 3854588
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| |||||||||||    
T  3854497 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 3854588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 285
Target Start/End: Complemental strand, 18105875 - 18105753
Alignment:
Q  166 tgccacatcaccattctgtttggtgactggacagaa---gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattg 262  Q
    |||||| ||||||||||||||| |||||||| | ||   || |||| | || ||||||| |||||||  ||||||||||| ||||||||||| |||||||    
T  18105875 tgccacctcaccattctgtttgatgactggataaaaattgatggcatgaactatttatgctaacagaggaaaaatgtaggaattttaaaaacctttattg 18105776  T
Q  263 aaatgtaatgactattcttcaaa 285  Q
    |||||||  || |||||||||||    
T  18105775 aaatgtagggaatattcttcaaa 18105753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 23221924 - 23221832
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||| |||||||||||||||||||||||   ||||||||||||||||  || |||| || |||| || || ||||||||||||    
T  23221924 aaaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaaccct 23221832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 39729607 - 39729699
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||  |||||||||||| ||||| |||||| ||| |||||||||||||| | |||||||||||||||| ||||||  || |||||||||    
T  39729607 aaaatgtgaggattttaaaaatatttaatgaaatataaagactattcttcaaactgacgcaaaatataaggactaaaaacgtaattaacccta 39729699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 2191466 - 2191392
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    |||||||||||||||| |||||||| || ||||||||||||||| ||||||| ||||||  ||||| ||||||||    
T  2191466 tttaaaaacatttattaaaatgtaaggattattcttcaaagtcaagcaaaatgtaaggaccaaaaacatatttaa 2191392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 24093236 - 24093154
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||| |||||||||  |||||||||||||||   |||||| | |||||| |||||| ||||||||||||    
T  24093236 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaagtgtaaggactaaaaacatatttaaccct 24093154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 323
Target Start/End: Complemental strand, 32860903 - 32860813
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||  |||||||||||||||||| |||||| ||| ||||||| |||||||  ||||||||||||| |  |||||| |||||||||||    
T  32860903 aaaatgttaggattttaaaaacatttaatgaaatataacgactatttttcaaagggacgcaaaatataaaggctaaaaacatatttaaccc 32860813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 32861047 - 32861105
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||    
T  32861047 tagggattttaaaaacatttattgaaatataaggactatttttcaaagtcacacaaaat 32861105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 12090125 - 12090217
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| || ||||||||  | |||  ||||| ||||||||||||    
T  12090125 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgcagggaccaaaaacatatttaaccct 12090217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 34037899 - 34037831
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatata 300  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||||||    
T  34037899 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatata 34037831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 39600842 - 39600769
Alignment:
Q  252 aacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||| |||||||||| ||||||||||  |||  ||||||||| ||||||||||||| |||||||||||||    
T  39600842 aacatttaatgaaatgtaaagactattctttcaagagacgcaaaatgtaaggattaaaaacatatttaacccta 39600769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 3854156 - 3854112
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  3854156 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 3854112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 10708135 - 10708067
Alignment:
Q  210 ggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||| |||| || |||| ||| ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  10708135 ggactatttgtgctaacggatgaaaaatgtaggaattttaaaaacatttattgaaatgtaaggactatt 10708067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 22701602 - 22701558
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  22701602 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 22701558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 32114483 - 32114563
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||| ||||| |||||||||| ||||||||||  |||   |||||||| |||||| |||||||||||||||||||    
T  32114483 attttaaaaatatttaatgaaatgtaaggactattctttgaagaggcgcaaaatgtaaggactaaaaatatatttaaccct 32114563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 324
Target Start/End: Complemental strand, 7083611 - 7083520
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||  |||||||||||| ||||| |||||||||  ||||||||||||||   ||| ||||| ||||||||||||| ||||||| ||||    
T  7083611 aaaatgtgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaatggacgtaaaatgtaaggattaaaaacatatttagccct 7083520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 21267369 - 21267460
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||  ||||||| |||||||||| |||||||||  |||||||||||||||   || ||||| |||||| |||||| ||||||||||||    
T  21267369 aaaatgtgaggatttttaaaacatttaatgaaatgtagggactattcttcaaaggatcgaaaaatgtaaggactaaaaacatatttaaccct 21267460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 7083756 - 7083838
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    ||||||||||| |||||||||||||||  |||  |||||| || ||||  | ||||||||||||||||||||| |||||||||    
T  7083756 tagggattttataaacatttattgaaaaataaaaactattttttaaagggatgcaaaatataaggattaaaaacatatttaac 7083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 12089784 - 12089746
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaa 270  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12089784 aaaaatgtagggattttaaaaacatttattgaaatgtaa 12089746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 334
Target Start/End: Complemental strand, 26525551 - 26525450
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaa 331  Q
    |||||||||||||||||||||| ||||||||||||||||  |||| || ||||| ||  ||||||  || |||  ||||| |||||||||| ||||||||    
T  26525551 aaaaatgtagggattttaaaaatatttattgaaatgtaagaactactc-tcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccatagaaaaa 26525453  T
Q  332 atg 334  Q
    |||    
T  26525452 atg 26525450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 3624925 - 3624969
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtc 288  Q
    ||||||||||||||||||||||||||  |||||||||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaagtc 3624969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 11450845 - 11450754
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||| ||||||||||||||||||||  || ||||| ||||| || || ||||| || |||  ||||| ||||||||||||    
T  11450845 aaaaatgtagggatttttaaaacatttattgaaatgtagggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccct 11450754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 351
Target Start/End: Complemental strand, 21217154 - 21217067
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactagctgcca 351  Q
    |||||||| |||||||||||||||||||||||||| || |||  | ||| ||||||||||||| || || |||| ||||||| ||||||    
T  21217154 aaatgtaaggactattcttcaaagtcacgcaaaatgtagggagcagaaacatatttaaccctaaaataattgga-cccactaactgcca 21217067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 351
Target Start/End: Original strand, 21265248 - 21265335
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactagctgcca 351  Q
    |||||||| |||||||||||||||||||||||||| || |||  | ||| ||||||||||||| || || |||| ||||||| ||||||    
T  21265248 aaatgtaaggactattcttcaaagtcacgcaaaatgtagggagcagaaacatatttaaccctaaaataattgga-cccactaactgcca 21265335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Original strand, 2036594 - 2036701
Alignment:
Q  223 taacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||| | ||||| ||||||||||||||||||| |||||||||||  |||||||||| |||     | ||||| || ||||||| || ||||||||||    
T  2036594 taacagagataaaatatagggattttaaaaacattaattgaaatgtagggactattctttaaaaaggtgtaaaatgtagggattaataacatatttaacc 2036693  T
Q  323 ctagaaaa 330  Q
    ||| ||||    
T  2036694 ctaaaaaa 2036701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 3691172 - 3691093
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaat 312  Q
    |||||||  |||||||||||||||||| |||||||||   |||||||||||||    ||||||||||||||| |||||||    
T  3691172 aaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaaagggcgcaaaatataaggactaaaaat 3691093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 322
Target Start/End: Original strand, 26525894 - 26525984
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||| |||||||||||||||||||||||||||||| ||  |||||||  ||||| || |||||||| || |||  ||||| ||||||||||    
T  26525894 aaaaattgtagggattttaaaaacatttattgaaatatagggactatt-atcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 26525984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 323
Target Start/End: Original strand, 27378080 - 27378170
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||||||||||||||| ||||||||||||||||||||  || ||||| ||||| || || ||||| || |||  ||||| |||||||||||    
T  27378080 aaaaatgtagggatttttaaaacatttattgaaatgtagggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 27378170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 22701944 - 22701982
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgta 269  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  22701944 aaaaaatgtagggattttaaaaacattcattgaaatgta 22701982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 10711002 - 10711095
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||| |||||||||||| ||||| | |||||||| ||||||| || ||||  | | |||||||| |||  ||||| |||||||||||||    
T  10711002 aaaaatgtaaggattttaaaaatatttactaaaatgtaaggactattttttaaagaaaagtaaaatatagggaccaaaaacatatttaacccta 10711095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 18105984 - 18105903
Alignment:
Q  68 ttagggattggaatcactatgaaatgggttgaatctatggatcgggtcttattttacctattttgtttgacccaatccattt 149  Q
    |||||||||||||||  |||||||||||||| ||| |||  | ||||||| ||||||| |||| ||||| | ||||||||||    
T  18105984 ttagggattggaatccatatgaaatgggttggatccatgagttgggtcttgttttacccatttcgtttggcacaatccattt 18105903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 21217163 - 21217212
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaa 295  Q
    ||||||| |||||||| |||| ||| ||||||||||||||||||||||||    
T  21217163 tttaaaagcatttattaaaatataaggactattcttcaaagtcacgcaaa 21217212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 21265239 - 21265190
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaa 295  Q
    ||||||| |||||||| |||| ||| ||||||||||||||||||||||||    
T  21265239 tttaaaagcatttattaaaatataaggactattcttcaaagtcacgcaaa 21265190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 2035697 - 2035661
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgta 269  Q
    ||||||||||||||||||||||||||||| |||||||    
T  2035697 aaaatgtagggattttaaaaacatttattaaaatgta 2035661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 34038252 - 34038300
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    ||||||||||| |||||||||| ||||||||||||||||  ||||||||    
T  34038252 aaaaatgtaggaattttaaaaatatttattgaaatgtaaaaactattct 34038300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 419
Target Start/End: Original strand, 38110366 - 38110422
Alignment:
Q  363 cgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    |||||| |||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  38110366 cgttaaatatttgacaacatggactatttaagctaacggaggaaaaatgtagggatt 38110422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 419
Target Start/End: Complemental strand, 44930129 - 44930059
Alignment:
Q  349 ccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    |||||||||| ||  ||||||||||||||  || |||||||||||||||||  |  |||||||||||||||    
T  44930129 ccacgtcagcgtccagttaattatttgacggcagggactatttgtgctaacggataaaaaatgtagggatt 44930059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 24093544 - 24093649
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||| |||||||||||||||||| | |||| ||   |||||||||||||     ||||||| ||||| ||||||| |||||||    
T  24093544 tgataacggagataaaatgtaaggattttaaaaacatttaataaaatataggcactattcttcaaatgggtgcaaaatgtaagggttaaaaagatattta 24093643  T
Q  320 acccta 325  Q
    | ||||    
T  24093644 atccta 24093649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 1804629 - 1804677
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  1804629 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 1804677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 6476210 - 6476162
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  6476210 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 6476162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 11451153 - 11451201
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  11451153 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 11451201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 8e-31; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 36793574 - 36793666
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  36793574 aaaaatgtagggattttaaaaacatttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggactaaaaacatatttaaccct 36793666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 166 - 325
Target Start/End: Original strand, 1500911 - 1501074
Alignment:
Q  166 tgccacatcaccattctgtttggtgactggacagaa----gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttatt 261  Q
    |||||||||| ||||||||||||||||||||  |||    ||||||||||| || || || |||| |   |||||||||||||||||||||||||||| |    
T  1500911 tgccacatcagcattctgtttggtgactggatggaaaatagacggcagggatcaattttgttaacggtagaaaaatgtagggattttaaaaacatttaat 1501010  T
Q  262 gaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||  ||||||||||||||    ||||||||||| ||| |||||| |||||||||||||    
T  1501011 gaaatgtagggactattcttcaaaagagcgcaaaatatagggactaaaaacatatttaacccta 1501074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 239 - 357
Target Start/End: Original strand, 3591171 - 3591289
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagc 338  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| || |||  ||||| |||||||||| || || || |||  |    
T  3591171 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcacaatgtagggaccaaaaacatatttaaccttaaaataattgggac 3591270  T
Q  339 ccactagctgccacgtcag 357  Q
    |||||| ||||||| ||||    
T  3591271 ccactaactgccacatcag 3591289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 19895656 - 19895573
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||  ||  ||||| ||||||||||    
T  19895656 tagggattttaaaaacatttattgaaatgcaaagactatttttcaaagtcacgcaaaatatagagaccaaaaacatatttaacc 19895573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 18180288 - 18180370
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||| | |||||||  ||||||||||||||||  |||||||||||| ||||||||| ||||||||||||    
T  18180288 ggattttaaaaacatttaataaaatgtatggactattcttcaaagtggcgcaaaatataaagattaaaaacatatttaaccct 18180370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 40124190 - 40124073
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| ||| | ||||| ||||||      
T  40124190 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcaagtaaaatgtaaggacc 40124092  T
Q  307 aaaaatatatttaacccta 325  Q
    ||||| |||||||||||||    
T  40124091 aaaaacatatttaacccta 40124073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 233 - 333
Target Start/End: Complemental strand, 5683250 - 5683150
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaa 332  Q
    |||||||  |||||||||| ||||||| |||||||||  ||||||| |||||||  ||||||||| ||||||||||||| |||||||||| || ||||||    
T  5683250 aaaatgtgaggattttaaatacatttaatgaaatgtagggactatttttcaaagagacgcaaaatgtaaggattaaaaacatatttaaccttacaaaaaa 5683151  T
Q  333 t 333  Q
    |    
T  5683150 t 5683150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 231 - 331
Target Start/End: Complemental strand, 9122775 - 9122676
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaa 330  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || || ||||| |  |||  ||||| ||||||||||||| ||||    
T  9122775 aaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgcgtaaaatgtggggaccaaaaacatatttaaccctaaaaaa 9122677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 207 - 323
Target Start/End: Original strand, 47410829 - 47410944
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| || |||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||      
T  47410829 cagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggacc 47410927  T
Q  307 aaaaatatatttaaccc 323  Q
    ||||| |||||||||||    
T  47410928 aaaaacatatttaaccc 47410944  T

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Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 17968127 - 17968035
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| ||||||||||||    
T  17968127 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 17968035  T

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Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 32266572 - 32266480
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||  ||||| |||||||||||||    
T  32266572 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 32266480  T

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Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 40124507 - 40124599
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||| ||||| || || ||||| || |||  |||||||||||||||||||    
T  40124507 aaaaatgtagggattttaaaaacatttattgaaatgtagggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaatatatttaacccta 40124599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 30427763 - 30427663
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaa 331  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |  ||||| ||  ||||||  || |||  ||||| ||||||||||||| |||||    
T  30427763 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccctaaaaaaa 30427664  T
Q  332 a 332  Q
    |    
T  30427663 a 30427663  T

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Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 324
Target Start/End: Complemental strand, 5172834 - 5172743
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||| |||||||||||||||||| |||||||||  ||||||||||||||    |||||||| |||| | |||||| ||||||||||||    
T  5172834 aaaatgtaaggattttaaaaacatttaatgaaatgtagagactattcttcaaatgagcgcaaaatgtaagaactaaaaacatatttaaccct 5172743  T

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Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 324
Target Start/End: Complemental strand, 9880573 - 9880482
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||  |||||||||||||||||| |||||||||  |||| ||||||||||  | ||||||| |||||| |||||| ||||||||||||    
T  9880573 aaaatgtgaggattttaaaaacatttaatgaaatgtagagacttttcttcaaagggatgcaaaatgtaaggactaaaaacatatttaaccct 9880482  T

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Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 323
Target Start/End: Original strand, 3591338 - 3591428
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||  |||||||||||||||||| | |||||||  ||||||||||||||    |||||||| |||||| ||||||||||||||||||    
T  3591338 aaaatgtgaggattttaaaaacatttaataaaatgtatggactattcttcaaatgagcgcaaaatgtaaggactaaaaatatatttaaccc 3591428  T

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Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 5683571 - 5683653
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||| ||||| |||||||||  ||||||||||||||   ||| |||||||||||| |||||| ||||||||||||    
T  5683571 ggattttaaaaatatttaatgaaatgtagggactattcttcaaaaagacgtaaaatataaggactaaaaacatatttaaccct 5683653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 324
Target Start/End: Complemental strand, 45664807 - 45664685
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataa 301  Q
    ||||| || ||| |||| ||||||| ||  |||||||| ||||||||||||||||||||| |||||||  ||||||||||||||    || ||||| ||     
T  45664807 gacggtagagactatttttgataacggagtaaaaatgtggggattttaaaaacatttattaaaatgtagagactattcttcaaatgagcgtaaaatgtag 45664708  T
Q  302 ggattaaaaatatatttaaccct 324  Q
    ||| |||||| ||||||||||||    
T  45664707 ggactaaaaacatatttaaccct 45664685  T

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Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 46802436 - 46802319
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||||||  ||||||||||||||||||||||| ||||||||||||||  |||||||| ||||| || || ||||| |  |||      
T  46802436 cagggactatttacgctaacagaggaaaaatgtagggattttaaaaacttttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtggggacc 46802338  T
Q  307 aaaaatatatttaacccta 325  Q
    ||||| |||||||||||||    
T  46802337 aaaaacatatttaacccta 46802319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 17968468 - 17968561
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |  ||||| ||  ||||||  || |||  ||||| |||||||||||||    
T  17968468 aaaaatgtagggattttaaaaacatttattgaaatgtaaagactaattctcaaaatcgtgcaaaacgtatggaccaaaaacatatttaacccta 17968561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 32266914 - 32267006
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||| ||||| || || ||||| || |||  ||||| |||||||||||||    
T  32266914 aaaaatgtagggattttaaaaacatttattgaaatgtagggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 32267006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 334
Target Start/End: Original strand, 37717797 - 37717897
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaa 332  Q
    |||| ||| ||||||||||||| ||||||||||||||| ||||||| ||||||||  || ||||| || ||| |||||| |||||||||| || ||||||    
T  37717797 aaaaagtaaggattttaaaaacctttattgaaatgtaaggactatt-ttcaaagttgcgtaaaatgtagggactaaaaacatatttaaccttaaaaaaaa 37717895  T
Q  333 tg 334  Q
    ||    
T  37717896 tg 37717897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 45230560 - 45230652
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||| ||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| ||||||||||||    
T  45230560 aaaaaatatagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 45230652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 47410512 - 47410420
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||| |  |  |||||||| |||  ||||| |||||||||||||    
T  47410512 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaattgcataaaatatagggaccaaaaacatatttaacccta 47410420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 8997430 - 8997382
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  8997430 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 8997382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 9123116 - 9123164
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  9123116 aaaaatgtagggattttaaaaacatttattgaaatgtagagactattct 9123164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 45230219 - 45230175
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  45230219 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 45230175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 48155053 - 48154974
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||||||||||||| | |||||||| |||||||||| ||||   || ||||||||||||||||||| ||||||||||    
T  48155053 ggattttaaaaacatttaataaaatgtaaggactattctt-aaagcggcgtaaaatataaggattaaaaacatatttaacc 48154974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 50359204 - 50359124
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||| ||||||||||| |||||||||  ||||||||||| || |  ||||||||||||||| |||||| |||||||||||    
T  50359204 gatttaaaaaacatttaatgaaatgtagggactattcttcgaattggcgcaaaatataaggactaaaaaaatatttaaccc 50359124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 50359427 - 50359531
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||| | |||||||  |||||||||||||||||| ||||||  || ||||||||||||||    |||||||| |||||| || ||| |||||||    
T  50359427 tgataacagagataaaatgtgaggattttaaaaacatttaatgaaataaaaggactattcttcaaatgggcgcaaaatgtaaggaatataaacatattta 50359526  T
Q  320 accct 324  Q
    |||||    
T  50359527 accct 50359531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 18180131 - 18180052
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||| ||||||||||||| || |||| || |||||||||||||||||| ||  || |||||| ||||||||||    
T  18180131 gattttaaaaatatttattgaaatgcaaggactgtttttcaaagtcacgcaaaatgtagtgactaaaaacatatttaacc 18180052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 322
Target Start/End: Original strand, 30428104 - 30428194
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||||||||||||||||||| |||||||||||   ||||||| ||||| || |||||||| || |||  ||||| ||||||||||    
T  30428104 aaaaaatgtagggattttaaaaacattcattgaaatgtaggaactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 30428194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 48155290 - 48155368
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    ||||||||||||||||| |||||| ||   || |||||||||||   |||||||||||||||||||||| |||||||||    
T  48155290 gattttaaaaacatttaatgaaatataggaacaattcttcaaaggagcgcaaaatataaggattaaaaacatatttaac 48155368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 36792329 - 36792238
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||| ||||||||||||| ||  || ||||||| ||| ||||||||||| || | | | |||| ||||||||||||    
T  36792329 aaaaatgtagggattttaaaa-catttattgaaatatagggattattcttgaaaatcacgcaaaatgtaggaacttaaaacatatttaaccct 36792238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 12869663 - 12869746
Alignment:
Q  241 gggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||    | |||||||| |||  ||||| ||||||||||||    
T  12869663 gggattttaaaaacatttattgaaatgtagggactattctttaaaggagggtaaaatatagggaccaaaaacatatttaaccct 12869746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 50359290 - 50359357
Alignment:
Q  255 atttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||||||||||| ||||||| |||||||||||||| ||| || |||  ||||| ||||||||||    
T  50359290 atttattgaaatgtaaggactatttttcaaagtcacgcagaatgtagggaccaaaaacatatttaacc 50359357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 4288428 - 4288525
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||  ||| |||||||  ||||||||||||||||||     |||||  |||||||||||||||   ||||||||||||||| |||||| |||||||    
T  4288428 tgataacgaatataaaatgtgaggattttaaaaacattta-----atgtagggactattcttcaaaggggcgcaaaatataaggactaaaaacatattta 4288522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 5683413 - 5683359
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    ||||||||||||||||||||||||| || ||| ||| |||||| |||||||||||    
T  5683413 gattttaaaaacatttattgaaatgcaaggacaatttttcaaattcacgcaaaat 5683359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 334
Target Start/End: Complemental strand, 18179981 - 18179867
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||| ||| |||||| ||| ||||||| |||||||    ||||||| |||||| |||||| || ||||    
T  18179981 tgataacggagataaaatgtgaggattttaaaaacaattaatgaaatataaggactatttttcaaaggggtgcaaaatgtaaggactaaaaacatgttta 18179882  T
Q  320 accctagaaaaaatg 334  Q
    |||||  ||||||||    
T  18179881 acccttaaaaaaatg 18179867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 46802753 - 46802799
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||    
T  46802753 aaaaatgtagggattttaaaaacatttattaaaatgtagggactatt 46802799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 6751341 - 6751446
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacg-caaaatataaggattaaaaatatattt 318  Q
    |||||||| | | |||||||  |||||||||||| ||||| |||||||||| |||| ||||| ||||  ||| |||||| ||| || |||||| ||||||    
T  6751341 tgataacaaagataaaatgtgaggattttaaaaaaatttaatgaaatgtaaggacttttctttaaagggacgccaaaatgtaatgactaaaaacatattt 6751440  T
Q  319 aaccct 324  Q
    ||||||    
T  6751441 aaccct 6751446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 322
Target Start/End: Complemental strand, 5172993 - 5172917
Alignment:
Q  247 ttaaaaacatttattgaaatgtaatg-actattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||||||||| || | || ||||| ||||| ||||    
T  5172993 ttaaaaacatttattaaaatgtaaaggactattctttaaagtcacgcaaaatgtaggaatcaaaaacatattgaacc 5172917  T

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Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 322
Target Start/End: Original strand, 9880764 - 9880880
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggat 305  Q
    |||||||| | || |||||||||| | |||||||  | |||||||||||||||| | |||| ||   |||||||||||||    |||||||| |||| ||    
T  9880764 gcagggactaattttgataacagagataaaatgtgagaattttaaaaacatttaataaaatatagaaactattcttcaaatgagcgcaaaatgtaagaat 9880863  T
Q  306 taaaaatatatttaacc 322  Q
    |||||| ||||||||||    
T  9880864 taaaaacatatttaacc 9880880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 12868521 - 12868469
Alignment:
Q  234 aaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaag 286  Q
    |||||||||||||||||||| |||||||||||||||   ||||||||| ||||    
T  12868521 aaatgtagggattttaaaaatatttattgaaatgtaggaactattctttaaag 12868469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 19976266 - 19976166
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||| ||| | ||||||| ||||||||||||||||||| | |||  |||  ||||||||||||||   |||||||| ||| || |||||| |||||||    
T  19976266 tgataatagagataaaatgtggggattttaaaaacatttaataaaaaataagaactattcttcaaagaagcgcaaaatgtaacgactaaaaacatattta 19976167  T
Q  320 a 320  Q
    |    
T  19976166 a 19976166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 31436395 - 31436475
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||| | |||| || |||||||||||||||   || |||||| |||||| |||||  ||||||||||||    
T  31436395 attttaaaaacatttaataaaatatagtgactattcttcaaaaggacacaaaatgtaaggactaaaatcatatttaaccct 31436475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 32266606 - 32266558
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    |||||||||||||||||||||  ||||||  ||||||||||||||||||    
T  32266606 atttgacaacaaggactatttacgctaacggaggaaaaatgtagggatt 32266558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 42723182 - 42723110
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatgg 335  Q
    |||| ||| |||||||||||||||||| ||||||| || |||  ||||| ||||||||||||| || ||||||    
T  42723182 aaatataaagactattcttcaaagtcaagcaaaatgtagggacaaaaaacatatttaaccctaaaataaatgg 42723110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 46802445 - 46802397
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||| ||||||||||||||||||    
T  46802445 atttgacaacagggactatttacgctaacagaggaaaaatgtagggatt 46802397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 18180149 - 18180191
Alignment:
Q  275 tattcttcaaagtcacgcaaaatataaggattaaaaatatatt 317  Q
    ||||||||||||||||||||||| |||||| |||||| |||||    
T  18180149 tattcttcaaagtcacgcaaaatgtaaggactaaaaacatatt 18180191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 324
Target Start/End: Original strand, 42723317 - 42723351
Alignment:
Q  290 cgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||||||| ||||||||||||    
T  42723317 cgcaaaatataaggattaaaaacatatttaaccct 42723351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 47541607 - 47541529
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaa 311  Q
    |||||||  |||||||||||||||||| |||||| ||  |||||||||||||||  ||  ||||| |||||| ||||||    
T  47541607 aaaatgtgaggattttaaaaacatttaatgaaatatagggactattcttcaaagggacataaaatgtaaggactaaaaa 47541529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 1500149 - 1500100
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattctt 281  Q
    |||||| ||||||||||||||||||| | |||||||||  ||||||||||    
T  1500149 aaaaatatagggattttaaaaacattcaatgaaatgtagggactattctt 1500100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 19895667 - 19895716
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||||||||||||  ||||||| || |||| |||||||||||||||    
T  19895667 gactattcttcaaagtcttgcaaaatgtagggatcaaaaatatatttaac 19895716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 31436226 - 31436275
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    ||||||||||||||||  ||||| | |||||||||||||||||||| |||||    
T  31436226 tttaaaaacatttatt--aatgttaggactattcttcaaagtcacgtaaaat 31436275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 269
Target Start/End: Complemental strand, 31889519 - 31889487
Alignment:
Q  237 tgtagggattttaaaaacatttattgaaatgta 269  Q
    |||||||||||||||||| ||||||||||||||    
T  31889519 tgtagggattttaaaaacgtttattgaaatgta 31889487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 40124199 - 40124151
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  40124199 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 40124151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 54168823 - 54168915
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||||||| ||||||| |||||||  || |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  54168823 aaaaatgtagggattttaaaaatatttattaaaatgtagggattattcttcaaagtcacgcaaaatatagggattaaaaacatatttaaccct 54168915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 49424543 - 49424450
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctag 326  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||  ||||||||||| |||| ||||||||||||||| ||||    
T  49424543 aaaatgtagggattttaaaaacatttattgatatgtaaagactattattcaaagtagcgcaaaatatagggataaaaaatatatttaactctag 49424450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 3296793 - 3296683
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactag 345  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||| || |||| |||||||||||||| |||| || || |||   ||||||     
T  3296793 tttaaaaacatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggatcaaaaatatatttaatcctaaaataattgggatccactaa 3296694  T
Q  346 ctgccacgtca 356  Q
    |||||||||||    
T  3296693 ctgccacgtca 3296683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 202 - 324
Target Start/End: Original strand, 47058477 - 47058599
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataa 301  Q
    |||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  | ||| | | ||||||| ||     
T  47058477 gacggcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaagactattaattaaaatgaggcaaaatgtag 47058576  T
Q  302 ggattaaaaatatatttaaccct 324  Q
    |||  ||||| ||||||||||||    
T  47058577 ggaccaaaaacatatttaaccct 47058599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 29691746 - 29691830
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||| ||||||  ||||| |||||||||||    
T  29691746 tagggattttaaaaacatttattgaaatgtaaagactattttttaaagtcacgcaaaatgtaaggaccaaaaacatatttaaccc 29691830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 54167584 - 54167492
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||| || ||| | |||| ||||||||||||    
T  54167584 aaaaatgtagggattttaaaaacatttattgaaatataaggactattcttgaaaatcacgcaaaatgtagggacttaaaacatatttaaccct 54167492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 233 - 332
Target Start/End: Original strand, 17288374 - 17288473
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaa 332  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||  |||||||| || ||| ||| || ||||||||||||| ||||||    
T  17288374 aaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaaccctaaaaaaaa 17288473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 10580122 - 10580040
Alignment:
Q  240 agggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||  ||||| ||||||||||    
T  10580122 agggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtatggaccaaaaacatatttaacc 10580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 233 - 322
Target Start/End: Complemental strand, 54142414 - 54142325
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| || ||| ||| || ||||||||||    
T  54142414 aaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatgtagggactaataacatatttaacc 54142325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 202 - 323
Target Start/End: Original strand, 54143471 - 54143592
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataa 301  Q
    |||||||||||||| || |  |||| || | |||||||| |||||||||||||||||||| |||||||  |||||||||||||||||  ||||||||||     
T  54143471 gacggcagggaccaattgtagtaacggagagaaaatgtaaggattttaaaaacatttattaaaatgtagggactattcttcaaagtcgtgcaaaatatag 54143570  T
Q  302 ggattaaaaatatatttaaccc 323  Q
    ||| ||| || |||||||||||    
T  54143571 ggactaataacatatttaaccc 54143592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 207 - 323
Target Start/End: Original strand, 3296919 - 3297035
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| | || ||||||| || | |||||||| |||||||||||||||||| ||||| |||  |||||||||||||||   |||||||| |||||| |    
T  3296919 cagggactaattttgataacggagataaaatgtaaggattttaaaaacatttaatgaaacgtagggactattcttcaaagggtcgcaaaatgtaaggact 3297018  T
Q  307 aaaaatatatttaaccc 323  Q
    |||||||||||||||||    
T  3297019 aaaaatatatttaaccc 3297035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 47053881 - 47053805
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||||||||||| |||| || |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  47053881 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 47053805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 323
Target Start/End: Complemental strand, 28505324 - 28505208
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggat 305  Q
    |||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||  ||||||| || |||     
T  28505324 gcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgtgcaaaatgtagggac 28505226  T
Q  306 taaaaatatatttaaccc 323  Q
     ||||| |||||||||||    
T  28505225 caaaaacatatttaaccc 28505208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 29691627 - 29691522
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||||||  ||||||||||||||   | |||||||||||||| |||||| |||||||    
T  29691627 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaatggatgcaaaatataaggactaaaaacatattta 29691528  T
Q  320 acccta 325  Q
    ||||||    
T  29691527 acccta 29691522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 207 - 323
Target Start/End: Complemental strand, 40841576 - 40841461
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| || |||||||||||||||||||||||||||||||||||||||  |||||||||| ||| || || ||||| || |||      
T  40841576 cagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctt-aaaatcgcgtaaaatgtagggacc 40841478  T
Q  307 aaaaatatatttaaccc 323  Q
    ||||| |||||||||||    
T  40841477 aaaaacatatttaaccc 40841461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 38759784 - 38759702
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||| |||||||||  |||||||||||||||   |||||||| |||||| |||||| ||||||||||||    
T  38759784 ggattttaaaaacatttaatgaaatgtatagactattcttcaaagaggcgcaaaatttaaggactaaaaaaatatttaaccct 38759702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 2669416 - 2669528
Alignment:
Q  210 ggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaa 309  Q
    |||| ||||| | |||| || |||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||  |||    
T  2669416 ggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggaccaaa 2669514  T
Q  310 aatatatttaaccc 323  Q
    || |||||||||||    
T  2669515 aacatatttaaccc 2669528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 12108280 - 12108337
Alignment:
Q  223 taacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  12108280 taacagagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 12108337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 332
Target Start/End: Original strand, 28957717 - 28957841
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||      
T  28957717 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggacc 28957815  T
Q  307 aaaaatatatttaaccctagaaaaaa 332  Q
    ||||| ||||||||||| | ||||||    
T  28957816 aaaaacatatttaacccaaaaaaaaa 28957841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 333
Target Start/End: Complemental strand, 43979647 - 43979546
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaa 331  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |  ||||| ||  |||||| ||| |||  ||||| ||||||||||| | |||||    
T  43979647 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacatagggaccaaaaacatatttaacccaaaaaaaa 43979548  T
Q  332 at 333  Q
    ||    
T  43979547 at 43979546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 43979988 - 43980080
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| ||||||||||||    
T  43979988 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 43980080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 2669096 - 2669005
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||| |  |  ||||||||||||  ||||| ||||||||||||    
T  2669096 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaattgcataaaatataaggaccaaaaacatatttaaccct 2669005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 7118176 - 7118256
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||| |||||||||  |||||||||||||||   |||||||| |||||| |||||| ||||||||||||    
T  7118176 attttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaaccct 7118256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 12922732 - 12922641
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |  |||||||| || |||  ||||| |||||||||||    
T  12922732 aaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaattgcgcaaaatgtagggaccaaaaacatatttaaccc 12922641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 31227968 - 31227869
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaa 331  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||| ||||| || || ||||| || |||  ||||| ||||||||||| |||||||    
T  31227968 aaaaatgtagggattttaaaaacatttattgaaatgtagggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccaagaaaaa 31227870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 324
Target Start/End: Original strand, 49426324 - 49426444
Alignment:
Q  204 cggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataagg 303  Q
    ||||||||||||||| || |||| ||   |||||||| |||||||||||| |||||||||||||||| ||||||| || |||||   ||||||| || ||    
T  49426324 cggcagggaccatttgtgttaacggaagtaaaatgtaaggattttaaaaatatttattgaaatgtaaggactattatttaaagtagagcaaaatgtaggg 49426423  T
Q  304 attaaaaatatatttaaccct 324  Q
    |  ||||| ||||||||||||    
T  49426424 acaaaaaacatatttaaccct 49426444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 51906807 - 51906911
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| ||| |||||  |||||||||||||||   |||||||| |||||| |||||| |||||||    
T  51906807 tgataacggagataaaatgtgaggattttaaaaacatttaatgagatgtagggactattcttcaaaggagcgcaaaatgtaaggactaaaaacatattta 51906906  T
Q  320 accct 324  Q
    |||||    
T  51906907 accct 51906911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 324
Target Start/End: Complemental strand, 17287576 - 17287485
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||| || |||||  |||||||| || ||| ||| || ||||||||||||    
T  17287576 aaaatgtaggaattttaaaaatatttattgaaatgtaaggactattatttaaagtagcgcaaaatgtagggactaataacatatttaaccct 17287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 323
Target Start/End: Complemental strand, 21235117 - 21235027
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  ||||| ||  ||||||| || |||  ||||| |||||||||||    
T  21235117 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt-atcaaaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 21235027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 31228285 - 31228399
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||   ||||||| ||||| || || ||||| || ||||     
T  31228285 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaggaactattc-tcaaaatcgcgtaaaatgtagggatc 31228383  T
Q  307 aaaaatatatttaacc 322  Q
    ||||| ||||||||||    
T  31228384 aaaaacatatttaacc 31228399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 325
Target Start/End: Complemental strand, 789985 - 789892
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||| |||||| |  |||||||| || |||  ||||| |||||||||||||    
T  789985 aaaaaatgtagggattttaaaaacattcattgaaatgtatggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaacccta 789892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 1791389 - 1791439
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaa 296  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaa 1791439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 5545018 - 5545076
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    |||| |||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  5545018 taggcattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacgcaaaat 5545076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 325
Target Start/End: Original strand, 30546145 - 30546238
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||| ||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| |||||||||||||    
T  30546145 aaaaaatgtagggattttaaaaatattcattgaaatgtagagactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacccta 30546238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 41510148 - 41510066
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||| ||| ||||| | |||||||  |||||||||||||||   |||||||| ||||||||||||||||||||||||||    
T  41510148 ggattttagaaatatttaataaaatgtagggactattcttcaaaggggcgcaaaatgtaaggattaaaaatatatttaaccct 41510066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 48554145 - 48554071
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    ||||||| |||||||| |||||||| |||||||||||||||||||||||||| || |||  ||||| ||||||||    
T  48554145 tttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaa 48554071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 3296645 - 3296544
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||||||  || ||||||||||||   |||||||| |||||| |||||| |||||||    
T  3296645 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggaatattcttcaaaggggcgcaaaatgtaaggactaaaaacatattta 3296546  T
Q  320 ac 321  Q
    ||    
T  3296545 ac 3296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 38026082 - 38026155
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  38026082 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 38026155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 40841893 - 40841942
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattctt 281  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  40841893 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctt 40841942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 1317150 - 1317106
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  1317150 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 1317106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 260
Target Start/End: Original strand, 7164919 - 7165017
Alignment:
Q  165 ttgccacatcaccattctgtttggtgactggacagaa---gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttat 260  Q
    ||||||||||||||||| ||||||||| |||  ||||   |||||| ||||| ||||||||||| |||  |||||||| || |||||||||||||||||    
T  7164919 ttgccacatcaccattccgtttggtgattgggtagaaattgacggcggggactatttatgataatagagtaaaaatgtgggaattttaaaaacatttat 7165017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 12923073 - 12923117
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  12923073 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 12923117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 26168245 - 26168165
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||||||||||||||||||||| || ||||||| |  ||||| ||||||||| || |||| ||||| ||||||||||    
T  26168245 ggattttaaaaacatttattgaaatgcaaggactattttctaaagtaacgcaaaatgtagggatcaaaaacatatttaacc 26168165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 28957400 - 28957309
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||| ||||| || || ||||| || |||  ||||| ||||||||||||    
T  28957400 aaaaatgtagggattttaaaaacatttattgaaatgtagggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccct 28957309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 30545803 - 30545759
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  30545803 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 30545759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 46263066 - 46263110
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  46263066 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 46263110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 48553998 - 48553894
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  ||||||||||||  |||| |||||||||  |||||||||||||||  ||||||||| |||||| ||||||  ||||||    
T  48553998 tgataacggagataaaatgtgaggattttaaaaaggtttaatgaaatgtatggactattcttcaaagggacgcaaaatgtaaggactaaaaacgtattta 48553899  T
Q  320 accct 324  Q
    |||||    
T  48553898 accct 48553894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 55347970 - 55348018
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattctt 281  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  55347970 aaaatgtagggattttaaaaacatttattgaaatgtagggactattctt 55348018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 1791371 - 1791320
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  1791371 gactattcttcaaagtcacgcaaaatgtaaggactaaaaacatatttaaccc 1791320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 3296802 - 3296897
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactagctgccacgtcagc 358  Q
    |||||||| |||||||||| |||||||||||||||||| |||  ||||| |||||||||| || || || |||  ||||||| ||||||| |||||    
T  3296802 aaatgtaaggactattctttaaagtcacgcaaaatatatggaccaaaaacatatttaaccttaaaataattgggacccactaactgccacatcagc 3296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 51906535 - 51906417
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| | || ||||||| || | |||||||  |||| ||||||||||||| ||||| |||  |||||||||||||||   |||||||| ||| || |    
T  51906535 cagggactaattttgataacggagataaaatgtgaggatattaaaaacatttaatgaaacgtagggactattcttcaaagaggcgcaaaatgtaaagact 51906436  T
Q  307 aaaaatatatttaacccta 325  Q
    ||||| |||||||||||||    
T  51906435 aaaaacatatttaacccta 51906417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 7118002 - 7118082
Alignment:
Q  241 gggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||||||||||| ||||||||| ||| ||||||| ||||||||| |||||||| | ||||  ||||| ||||||||||    
T  7118002 gggattttaaaaacatgtattgaaatttaaggactatttttcaaagtcgcgcaaaatgt-aggaccaaaaacatatttaacc 7118082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 30608621 - 30608726
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||| ||  |||||||||||||||   | |||||| |||||  |||||| |||||||    
T  30608621 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaagaggcacaaaatgtaaggtctaaaaacatattta 30608720  T
Q  320 acccta 325  Q
    ||||||    
T  30608721 acccta 30608726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 51906668 - 51906619
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaa 295  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  51906668 tttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgcaaa 51906619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 55347650 - 55347558
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||| ||||| |  || ||||| || |||  |||||||||||||| ||||    
T  55347650 aaaaatgtagggattttaaaaacatttattaaaatgtagggactattc-tcaaaattgcgtaaaatgtagggaccaaaaatatatttaatccta 55347558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 790326 - 790370
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  790326 aaaaatgtaggaattttaaaaacatttattgaaatgtaaggacta 790370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 48760103 - 48760206
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||| | |||||||   ||||||||||||||||| |||| ||||   |||||||||||||   ||||| |||||||| | |||||| |||||||    
T  48760103 tgataacagagataaaatgtgaagattttaaaaacatttaatgaattgtacgaactattcttcaaaaagacgcacaatataagaactaaaaacatattta 48760202  T
Q  320 accc 323  Q
    ||||    
T  48760203 accc 48760206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 324
Target Start/End: Original strand, 1317494 - 1317583
Alignment:
Q  234 aaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||| |||||||||||||| |||||||||||  ||||||| |||||| || |||||||| || | |  ||||| ||||||||||||    
T  1317494 aaatgtaggaattttaaaaacattcattgaaatgtagggactatt-ttcaaaatcgcgcaaaatgtaggaaccaaaaacatatttaaccct 1317583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 21235461 - 21235507
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||||||||| |||||||||||||||||||||||||||  |||||||    
T  21235461 aaaaatgtagagattttaaaaacatttattgaaatgtagggactatt 21235507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 35166708 - 35166750
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtc 288  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  35166708 tttaaaaacatttattaaaatgtaaggactattcttcaaagtc 35166750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 35469074 - 35469151
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    ||||||||||||| |||| |||||||||| || |||||||||| |   ||| |||| ||||||||||||||||||||||    
T  35469074 ggattttaaaaac-tttaatgaaatgtaaggattattcttcaatggggcgcgaaatgtaaggattaaaaatatatttaa 35469151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 26168259 - 26168312
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||||||||||| || |||  ||||| |||||||||||||    
T  26168259 gactattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaacccta 26168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 34129288 - 34129353
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaa 285  Q
    |||||||||| | |||||||  |||||||||||| ||||| |||||||||  ||||||||||||||    
T  34129288 tgataacagagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaa 34129353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 26168380 - 26168483
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgta--atgactattcttcaaagtcacgcaaaatataaggattaaaaatatatt 317  Q
    |||||||| | | ||||||| | ||||||| ||||||||| | |||||||  | ||||||||| |||||   |||||||| ||||||||||||| |||||    
T  26168380 tgataacaaagataaaatgtggagattttagaaacatttaataaaatgtaggaggactattctacaaaggggcgcaaaatgtaaggattaaaaacatatt 26168479  T
Q  318 taac 321  Q
    ||||    
T  26168480 taac 26168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 34294529 - 34294451
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||||||||||||||| |||||||| | ||||||||||||||   || |||||| ||| || ||||||||||||||||||    
T  34294529 gattttaaaaacatttaatgaaatgt-aggactattcttcaaatggacacaaaatgtaa-gactaaaaatatatttaaccc 34294451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 38025765 - 38025717
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||    
T  38025765 aaaaatgtagggattttaaaattttttattgaaatgtaaggactattct 38025717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 46262725 - 46262634
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||||  |||||||||||||| |||||||||||  ||||||| |||||| |  |||||||| || |||  ||||| |||||||||||    
T  46262725 aaaaaatgtagaaattttaaaaacattcattgaaatgtagggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaaccc 46262634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 324
Target Start/End: Complemental strand, 19310839 - 19310785
Alignment:
Q  270 atgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||   |||||||| |||||| |||||| ||||||||||||    
T  19310839 atgactattcttcaaagaggcgcaaaatgtaaggactaaaaacatatttaaccct 19310785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 30608491 - 30608553
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||| |||||||||| ||||||||||||||| || |||  ||||| |||||||| ||||    
T  30608491 aaatgtaaggactattcttaaaagtcacgcaaaatctagggaccaaaaacatatttaatccta 30608553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 47058451 - 47058521
Alignment:
Q  349 ccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    |||||||||| ||  ||||||||||||||  || |||||||||||||||||  |  |||||||||||||||    
T  47058451 ccacgtcagcgtccagttaattatttgacggcagggactatttgtgctaacggataaaaaatgtagggatt 47058521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 48759973 - 48760035
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||  |||||||||| ||||||| ||||||||| |||  ||||| |||||||||||||    
T  48759973 aaatgtaagaactattcttcgaagtcacacaaaatatagggaccaaaaacatatttaacccta 48760035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 51906677 - 51906739
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||| |||||||||||||||||| ||||||| || |||  ||||  |||||||||||||    
T  51906677 aaatgtaaggactattcttcaaagtcatgcaaaatgtagggaccaaaatcatatttaacccta 51906739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 5545007 - 5544954
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||| ||||||| || |||  ||||| |||||||||||||    
T  5545007 gactattcttcaaagtcatgcaaaatgtagggaccaaaaacatatttaacccta 5544954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 10580137 - 10580206
Alignment:
Q  275 tattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccacta 344  Q
    |||||||||||||||| |||||| ||||||  ||||| ||||||||| ||| ||||| |||  |||||||    
T  10580137 tattcttcaaagtcactcaaaatgtaaggacaaaaaacatatttaactctaaaaaaattgggacccacta 10580206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 28505641 - 28505678
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgta 269  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  28505641 aaaaatatagggattttaaaaacatttattaaaatgta 28505678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 30608347 - 30608270
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    ||||||| || | |||||||  |||||||||||| || || |||||||||  |||||||||||||| | |||||||||    
T  30608347 tgataacggagataaaatgtgaggattttaaaaatatataatgaaatgtagggactattcttcaaaatgacgcaaaat 30608270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 325
Target Start/End: Original strand, 1620914 - 1620942
Alignment:
Q  297 tataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||||||||||||||    
T  1620914 tataaggattaaaaatatatttaacccta 1620942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 1791228 - 1791184
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaag 286  Q
    ||||||| |||||||||| |||||||||  |||||||||||||||    
T  1791228 ggatttttaaaacatttaatgaaatgtatggactattcttcaaag 1791184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 12107794 - 12107758
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgta 269  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  12107794 aaaatgtagggattttagaaacatttattaaaatgta 12107758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 28957708 - 28957756
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  28957708 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 28957756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 31228276 - 31228324
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  31228276 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 31228324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 38026073 - 38026121
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  38026073 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 38026121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 8e-28; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 25770577 - 25770494
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||||||| ||||||||||    
T  25770577 tagggattttaaaaacatttattgaaatgtaaagactatttttcaaaatcacgcaaaatgtaaggattaaaaacatatttaacc 25770494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 20831071 - 20831147
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20831071 gacggcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 20831147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 206 - 325
Target Start/End: Complemental strand, 4199568 - 4199450
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggat 305  Q
    |||||||| ||||| | |||| ||| ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| ||  ||||||| || |||     
T  4199568 gcagggactatttacgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatataaggactattc-tcaaaatcgtgcaaaatgtagggac 4199470  T
Q  306 taaaaatatatttaacccta 325  Q
     ||||| |||||||||||||    
T  4199469 caaaaacatatttaacccta 4199450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 328
Target Start/End: Complemental strand, 22814385 - 22814290
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaa 328  Q
    |||||||  |||||||||||||||||| |||||||||  |||||||||||||||   |||||||| |||| |||||||| ||||||||||||||||    
T  22814385 aaaatgtgaggattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaagaattaaaaacatatttaaccctagaa 22814290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 48868588 - 48868679
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||  |||||||| || ||| ||| || ||||||||||||    
T  48868588 aaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaaccct 48868679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 333
Target Start/End: Original strand, 44504374 - 44504487
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||||||| |||||||||||||||    ||||||| |||||| |||||| | |||||    
T  44504374 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaacacattta 44504473  T
Q  320 accctagaaaaaat 333  Q
    |||||| |||||||    
T  44504474 accctaaaaaaaat 44504487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 45539615 - 45539731
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| || |||||||||||||||||||||||||||||||||||||||  |||||||||| ||| || || ||||| || |||      
T  45539615 cagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctt-aaaatcgcgtaaaatgtagggacc 45539713  T
Q  307 aaaaatatatttaaccct 324  Q
    ||||| ||||||||||||    
T  45539714 aaaaacatatttaaccct 45539731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 20826848 - 20826772
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||||||||||| |||| || | || ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  20826848 gacggcagggactatttgtgctgacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 20826772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 35300859 - 35300796
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaa 270  Q
    |||||||||||| || |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  35300859 cagggaccatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaa 35300796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 44504344 - 44504265
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||||||||||||||||||| || ||||| | |||||||||||||||||| |||| || ||||| ||||||||||    
T  44504344 gattttaaaaacatttattgaaatgcaaggactaattttcaaagtcacgcaaaatgtaagaatcaaaaacatatttaacc 44504265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 2388746 - 2388673
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    ||||||| ||||| | |||| || |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  2388746 cagggactatttaagctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactattct 2388673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 34949846 - 34949754
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| ||||||||||||    
T  34949846 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 34949754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 36899344 - 36899252
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||  ||||| ||||||||||||    
T  36899344 aaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccct 36899252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 42606394 - 42606321
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    ||||||| ||||| | |||| || |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  42606394 cagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 42606321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 4199886 - 4199977
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||| ||||| || |||||||| || |||  ||||| ||||||||||||    
T  4199886 aaaaatatagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 4199977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 22406932 - 22406840
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |  ||||| ||  ||||||  ||||||  ||||| ||||||||||||    
T  22406932 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtaaggaccaaaaacatatttaaccct 22406840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 9218348 - 9218431
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||| ||||||||||||||||||| ||  |||||| |||||||||||||||||| || |||  ||||| ||||||||||    
T  9218348 tagggatttaaaaaacatttattgaaatgcaaatactatttttcaaagtcacgcaaaatgtagggagcaaaaacatatttaacc 9218431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 37172337 - 37172254
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||| |||||||||||||| ||||||| ||| || |||| |||||||||||||||||| ||||||  ||||| ||||||||||    
T  37172337 taggggttttaaaaacatttgttgaaatctaaggattatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaacc 37172254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 54588546 - 54588491
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtc 288  Q
    |||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  54588546 aaaatgtaggaattttaaaaacatttattgaaatgtatggactattcttcaaagtc 54588491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 132069 - 132151
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||| |||||||||| |||||||||||||||    ||||||| |||||| |||| | ||||||||||||    
T  132069 ggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggagtgcaaaatgtaaggactaaatacatatttaaccct 132151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 27013657 - 27013583
Alignment:
Q  247 ttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||||| |||| |||||||| |||||||||||||| ||||||||||| ||||||  ||||| |||||||||    
T  27013657 ttaaaaacatatattaaaatgtaaggactattcttcaaaatcacgcaaaatgtaaggaccaaaaacatatttaac 27013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 51587620 - 51587570
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattctt 281  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  51587620 aaaaaatatagggattttaaaaatatttattgaaatgtaatgactattctt 51587570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 22407273 - 22407365
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||| |||||| |  |||||||| || |||  ||||| ||||||||||||    
T  22407273 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaaccct 22407365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 27475475 - 27475387
Alignment:
Q  236 atgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| |||||||||||||    
T  27475475 atgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacccta 27475387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 45539298 - 45539249
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattctt 281  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  45539298 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctt 45539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 46689796 - 46689723
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  46689796 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 46689723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 46690113 - 46690205
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||| ||||| || || ||||| || |||  ||||| |||||||||||||    
T  46690113 aaaaatgtagggattttaaaaacatttattgaaatgtagggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 46690205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 321
Target Start/End: Complemental strand, 9217909 - 9217821
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||  |||||||||||||||||| |||||||||  |||||||||||||||   ||||||||||| ||| |||||  |||||||||    
T  9217909 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcagcgcaaaatatatggactaaaacgatatttaac 9217821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 34950187 - 34950231
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  34950187 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 34950231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 48867739 - 48867647
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||| |||||||||||| |||||||||||||||  ||||||| || |||||  |||||||| || ||| ||| || |||||||||||||    
T  48867739 aaaatgtaaggattttaaaaatatttattgaaatgtagggactattatttaaagtagcgcaaaatgtagggactaataacatatttaacccta 48867647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 323
Target Start/End: Original strand, 7248489 - 7248580
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||||||||||||||| ||||||| |||||| | ||||||| || ||||  | | ||||| || |||||||||| |||||||||||    
T  7248489 aaaaatgtagggattttaaaaatatttattaaaatgtgaggactattttttaaagggaggtaaaatgtagggattaaaaacatatttaaccc 7248580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 26741138 - 26741221
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||| ||||||| |||||||||||||||||| || |||| |||||||||||||||||| || |||  ||||||  ||||||||    
T  26741138 tagggtttttaaagacatttattgaaatgtaaggattatttttcaaagtcacgcaaaatgtagggagcaaaaattaatttaacc 26741221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 324
Target Start/End: Complemental strand, 43933529 - 43933438
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||  |||||||||||| ||||| |||||||||  ||||||||||||||    | |||||| |||||| |||||||||||||||||||    
T  43933529 aaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaacgggcacaaaatgtaaggactaaaaatatatttaaccct 43933438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 323
Target Start/End: Complemental strand, 51471437 - 51471334
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||||||   ||||||||||||||  ||||||||| |||| | ||| || |||||||    
T  51471437 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaactattcttcaaagggacgcaaaatgtaagaactaagaacatattta 51471338  T
Q  320 accc 323  Q
    ||||    
T  51471337 accc 51471334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 9218524 - 9218606
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||| |||||| ||  |||||||||||||||   |||||||| ||| || |||||| |||||||||||||    
T  9218524 gattttaaaaacatttaatgaaatatagggactattcttcaaaggagcgcaaaatgtaatgactaaaaacatatttaacccta 9218606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 13637768 - 13637870
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||| ||||| |||||||||  |||||||||||||||   |||||||| |||||| || ||| |||||||    
T  13637768 tgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagagactattcttcaaaggggcgcaaaatgtaaggactagaaacatattta 13637867  T
Q  320 acc 322  Q
    |||    
T  13637868 acc 13637870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 278
Target Start/End: Complemental strand, 33225634 - 33225532
Alignment:
Q  180 tctgtttggtgactggacagaa----gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgact 275  Q
    |||||||||||||||||||| |    |||||||||||| |  | || ||||||||| ||||||| ||||||||||||||||||| | |||||||  ||||    
T  33225634 tctgtttggtgactggacaggaaattgacggcagggactaaatttggtaacagatataaaatgtggggattttaaaaacatttacttaaatgtagggact 33225535  T
Q  276 att 278  Q
    |||    
T  33225534 att 33225532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 51471567 - 51471506
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||| ||||||||||||||||||| ||||||||| |||  ||||| ||||||||||||    
T  51471567 aaatgtaaggactattcttcaaagtcacacaaaatatagggaccaaaaacatatttaaccct 51471506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 2389063 - 2389111
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||    
T  2389063 aaaaatgtagggattttaaaaacatttattaaaatgtagggactattct 2389111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 25770410 - 25770318
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||  ||||| |||||||||||| |||||||||  |||||||||||||||  |  |||||| |||||| |||||| ||||| |||||||    
T  25770410 aaaatgtgaggattctaaaaacatttaatgaaatgtagggactattcttcaaagggatacaaaatgtaaggactaaaaacatattgaacccta 25770318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 325
Target Start/End: Original strand, 25770589 - 25770641
Alignment:
Q  273 actattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||||||||||||    
T  25770589 actattcttcaaagtcacgcaaaatgtagagatcaaaaatatatttaacccta 25770641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 27475729 - 27475773
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||    
T  27475729 aaaaatgtagggattttaaaaacatttattgaaatataaggacta 27475773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 36899685 - 36899733
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||    
T  36899685 aaaaatatagggattttaaaaacatttattgaaatgtagggactattct 36899733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 42606711 - 42606759
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||    
T  42606711 aaaaatgtagggattttaaaaatatttattgaaatgtagggactattct 42606759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 22814529 - 22814466
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataagga-ttaaaaatatatttaacccta 325  Q
    |||||||| |||||||||||||||||||||||||| || |||  |||||| |||||||||||||    
T  22814529 aaatgtaaggactattcttcaaagtcacgcaaaatgtagggacctaaaaacatatttaacccta 22814466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 34743458 - 34743561
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||| ||| |||||||  ||||||| |||||||||| |||||||||| ||  |||||||||||  ||||||| | |||||| || | | |||||||    
T  34743458 tgataacatatataaaatgtgaggatttttaaaacatttaatgaaatgtaaggataattcttcaaagggacgcaaagtgtaaggactagatacatattta 34743557  T
Q  320 accc 323  Q
    ||||    
T  34743558 accc 34743561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 45728335 - 45728409
Alignment:
Q  250 aaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||| ||||| |||||||||  |||||||||||||||  || |||||| |||||| |||||| ||||||||||||    
T  45728335 aaaatatttaatgaaatgtatggactattcttcaaagggacacaaaatgtaaggactaaaaacatatttaaccct 45728409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 50732437 - 50732379
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    |||||||||| |||||||||||||||||| || ||||||| || ||||||| |||||||    
T  50732437 tagggattttgaaaacatttattgaaatgcaaagactatttttaaaagtcatgcaaaat 50732379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 50780418 - 50780476
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    |||||||||| |||||||||||||||||| || ||||||| || ||||||| |||||||    
T  50780418 tagggattttgaaaacatttattgaaatgcaaagactatttttaaaagtcatgcaaaat 50780476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 37172161 - 37172084
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||||||||||| |||||||||  |||||||||| |||    |||||||| |||||| |||||| |||||||    
T  37172161 ggattttaaaaacatttaatgaaatgtagagactattctttaaataagcgcaaaatgtaaggactaaaaaaatattta 37172084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 51755915 - 51755968
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaag 286  Q
    |||||||  |||||||||||||||||| |||||||||  |||||||||||||||    
T  51755915 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaag 51755968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 26741292 - 26741393
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||| | |||||||  |||||||||||||| |    ||||||||| |||||||||||||||   |||||||  |||||| | |||| |||||||    
T  26741292 tgataacagagataaaatgtgaggattttaaaaacaat----gaaatgtaaagactattcttcaaaggggcgcaaaacgtaaggacttaaaacatattta 26741387  T
Q  320 acccta 325  Q
    ||||||    
T  26741388 acccta 26741393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 37172464 - 37172568
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||| ||| | ||||||| | ||||||||||||||||| | || ||||   | ||||||||||||  ||| ||||   ||||||||||||||||||||    
T  37172464 tgataatagagataaaatgtggagattttaaaaacatttaataaagtgtaggaattattcttcaaagggacgtaaaacgcaaggattaaaaatatattta 37172563  T
Q  320 accct 324  Q
    |||||    
T  37172564 accct 37172568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 50732305 - 50732229
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattt 318  Q
    |||||||||||| ||||| |||||||||  ||||||| |||||||   |||||||| ||||||| ||||| ||||||    
T  50732305 ggattttaaaaatatttaatgaaatgtatggactatttttcaaaggagcgcaaaatgtaaggataaaaaacatattt 50732229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 50780550 - 50780626
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattt 318  Q
    |||||||||||| ||||| |||||||||  ||||||| |||||||   |||||||| ||||||| ||||| ||||||    
T  50780550 ggattttaaaaatatttaatgaaatgtatggactatttttcaaaggagcgcaaaatgtaaggataaaaaacatattt 50780626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 131948 - 131999
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaa 294  Q
    ||||||||||||| |||||||||||||| ||||||  |||||||||| ||||    
T  131948 gattttaaaaacacttattgaaatgtaaggactatatttcaaagtcatgcaa 131999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 43933603 - 43933666
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataagga-ttaaaaatatatttaacccta 325  Q
    |||||||| ||||||||||||||||| ||||||||||| |||   ||||| |||||||||||||    
T  43933603 aaatgtaaagactattcttcaaagtcgcgcaaaatatagggaccaaaaaacatatttaacccta 43933666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 51588471 - 51588529
Alignment:
Q  238 gtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    ||||| |||||||||||||||||| |||||| | || ||||||||||| |||||||||||    
T  51588471 gtaggtattttaaaaacatttattaaaatgt-aggattattcttcaaaatcacgcaaaat 51588529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 20831045 - 20831115
Alignment:
Q  349 ccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    |||||||||| ||  ||||||||||||||  || |||||||||||||||||  |  |||||||||||||||    
T  20831045 ccacgtcagcgtccagttaattatttgacggcagggactatttgtgctaacggataaaaaatgtagggatt 20831115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 37172348 - 37172398
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||| ||||||||||||||||||||| ||| |||||| | ||||||||    
T  37172348 gactatttttcaaagtcacgcaaaatatagggactaaaaacaaatttaacc 37172398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 308
Target Start/End: Original strand, 51471576 - 51471638
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaa 308  Q
    |||||||| ||||||| |||||||| |||  ||||||||||||| ||||||| |||| |||||    
T  51471576 tttaaaaatatttattcaaatgtaaggaccgttcttcaaagtcatgcaaaatgtaagaattaa 51471638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 3799811 - 3799766
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    ||||||||||||||||||||||||||| | |||||||  |||||||    
T  3799811 aaaatgtagggattttaaaaacatttacttaaatgtagagactatt 3799766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 13637554 - 13637478
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    ||||||||||| ||||| ||||||| || ||||||| |||||||   |||||||| ||| ||||||||| ||||||||    
T  13637554 gattttaaaaatatttaatgaaatgcaa-gactattattcaaagaagcgcaaaatgtaaagattaaaaacatatttaa 13637478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 22814597 - 22814674
Alignment:
Q  248 taaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||| |||||||||   |||||| |||||||   | ||||||||||| | |||||| |||||||||||||    
T  22814597 taaaaacatttaatgaaatgtatgaactatttttcaaagaggcacaaaatataagtactaaaaacatatttaacccta 22814674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 43933716 - 43933816
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||||| | ||||| |  |||||||||||||||||| ||||| |||  ||||||| ||||||   ||||||||| | |||| |||||| |||||||    
T  43933716 tgataacagagataaaatatgaggattttaaaaacatttaatgaaa-gtagagactatttttcaaatggacgcaaaatgtgaggactaaaaacatattta 43933814  T
Q  320 ac 321  Q
    ||    
T  43933815 ac 43933816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 44504194 - 44504129
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaa 285  Q
    ||||||| || | |||||||  |||||||||||| ||||| |||||||||  ||||||||||||||    
T  44504194 tgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaa 44504129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 47343726 - 47343771
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    ||||||||||||||||||||||||||| | |||||||  |||||||    
T  47343726 aaaatgtagggattttaaaaacatttacttaaatgtagagactatt 47343771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 325
Target Start/End: Complemental strand, 8113781 - 8113753
Alignment:
Q  297 tataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||||||||||||||    
T  8113781 tataaggattaaaaatatatttaacccta 8113753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 25770728 - 25770804
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    |||||||||||||||| | |||||||   |||||||||||||     ||||||| ||||||||||||| ||||||||    
T  25770728 attttaaaaacatttaataaaatgtaggaactattcttcaaatgagtgcaaaatgtaaggattaaaaacatatttaa 25770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 35301863 - 35301927
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaat 266  Q
    |||||||||||| |||| || |||| || ||||||| |||| |||||||||| |||||| |||||    
T  35301863 gacggcagggactatttgtgctaactgagaaaaaatataggaattttaaaaatatttatcgaaat 35301927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 38485787 - 38485699
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    ||||||| | ||||||||||||||| || | |||||||  |||||||||||||||   | |||||| |||||| |||||  ||||||||    
T  38485787 aaaaatgcaaggattttaaaaacatataataaaatgtatggactattcttcaaagaggcacaaaatgtaaggactaaaatcatatttaa 38485699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 46689805 - 46689757
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  46689805 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 46689757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 325
Target Start/End: Original strand, 32964 - 33087
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataa 301  Q
    |||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  | ||| | | ||||||| ||     
T  32964 gacggcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtag 33063  T
Q  302 ggattaaaaatatatttaacccta 325  Q
    |||  ||||| |||||||||||||    
T  33064 ggaccaaaaacatatttaacccta 33087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 29394 - 29318
Alignment:
Q  202 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||||||||||| |||| || |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  29394 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 29318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 32938 - 33008
Alignment:
Q  349 ccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    |||||||||| ||  ||||||||||||||  || |||||||||||||||||  |  |||||||||||||||    
T  32938 ccacgtcagcgtccagttaattatttgacggcagggactatttgtgctaacggataaaaaatgtagggatt 33008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 8710341 - 8710433
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    |||||||||||||| |||||| |||||||||||||    
T  8710341 aaaatgtggggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaacccta 8710433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 5974100 - 5974008
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||| ||||||||||||||||||| |||||||||  |||||||||||||||    |||||||||||||| |||||| |||||||||||||    
T  5974100 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaacccta 5974008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 14712913 - 14712830
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| || |||  ||||| ||||||||||    
T  14712913 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtgacgcaaaatgtagggaccaaaaacatatttaacc 14712830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 14257261 - 14257144
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| || |||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||      
T  14257261 cagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggacc 14257163  T
Q  307 aaaaatatatttaacccta 325  Q
    ||||| |||||||||||||    
T  14257162 aaaaacatatttaacccta 14257144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 6162334 - 6162286
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6162334 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 6162286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 321
Target Start/End: Original strand, 6162687 - 6162776
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || |||||||| || |||  ||||| |||||||||    
T  6162687 aaaaaatgtagggattttaaaaacatttattgaaatgtagagactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 6162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 33107360 - 33107452
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| ||||||||||||    
T  33107360 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 33107452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 7645956 - 7646071
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggat 305  Q
    |||||||| | || ||||||| || | |||||||  | ||||| ||||||||||||||||||||| |||||||||||||||   | |||||| ||||||     
T  7645956 gcagggactaattttgataacggagataaaatgtgagaatttttaaaacatttattgaaatgtaaggactattcttcaaaggagcacaaaatgtaaggac 7646055  T
Q  306 taaaaatatatttaac 321  Q
    |||||| |||||||||    
T  7646056 taaaaacatatttaac 7646071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 323
Target Start/End: Complemental strand, 211530 - 211440
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||  ||||||||||| |||||| |||||||||  |||||||||||||||   |||||||| |||||| |||||| |||||||||||    
T  211530 aaaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaaccc 211440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 20824278 - 20824205
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  20824278 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 20824205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 21113279 - 21113202
Alignment:
Q  245 ttttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||||||||  || |||| ||| | ||||||||||    
T  21113279 ttttaaaaatatttattgaaatgcaatgactatttttcaaagtcacgcaaaacgtagggatcaaagacatatttaacc 21113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 34984544 - 34984635
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||| ||||| || |||||||| || |||  ||||| ||||||||||||    
T  34984544 aaaaaatgtagg-attttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 34984635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 4510268 - 4510180
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaa 330  Q
    |||||||||||||||||| |||||||||  ||||||||||||||    || ||||| |||||| |||||| ||||||||||||| ||||    
T  4510268 ggattttaaaaacatttaatgaaatgtagggactattcttcaaataggcgtaaaatgtaaggactaaaaacatatttaaccctaaaaaa 4510180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 14257578 - 14257669
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||| |  |  |||||||| |||  ||||| ||||||||||||    
T  14257578 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattct-caaaattgcataaaatatagggaccaaaaacatatttaaccct 14257669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 367
Target Start/End: Complemental strand, 17157778 - 17157674
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactagctgccacgtcagcttct 362  Q
    |||||||| ||||||||||||||||||| |||||| || |||| ||||| ||||||||||||| || || |||  ||||||| || |||| ||||| | |    
T  17157778 aaatgtaaggactattcttcaaagtcacacaaaatgtagggatcaaaaacatatttaaccctaaaataattgggacccactaactaccacatcagcattt 17157679  T
Q  363 cgtta 367  Q
    |||||    
T  17157678 cgtta 17157674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 20522157 - 20522209
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaa 285  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||||    
T  20522157 aaaatgtagtgattttaaaaacatttattgaaatgtagggactattcttcaaa 20522209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 20824595 - 20824686
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||| ||||| || || ||||| || |||  ||||| ||||||||||||    
T  20824595 aaaaatgtagggattttaaaaacatttattgaaatgtagggattattc-tcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccct 20824686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 33107019 - 33106975
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  33107019 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 33106975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 20228209 - 20228272
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgta 269  Q
    |||||||| ||||| | |||||||  |||||||||||||||||||||||||||||| |||||||    
T  20228209 gcagggactatttacgctaacagaggaaaaatgtagggattttaaaaacatttattaaaatgta 20228272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 22122193 - 22122256
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgta 269  Q
    |||||||| ||||| | |||||||  |||||||||||||||||||||||||||||| |||||||    
T  22122193 gcagggactatttacgctaacagaggaaaaatgtagggattttaaaaacatttattaaaatgta 22122256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 25932312 - 25932249
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataagga-ttaaaaatatatttaacccta 325  Q
    ||||||||| |||||||||||||||||||||||||||| |||   |||||||||||||||||||    
T  25932312 aaatgtaataactattcttcaaagtcacgcaaaatatagggaccaaaaaatatatttaacccta 25932249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 211582 - 211644
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||| |||||||||||||||| ||||||||| || |||  |||||||||||||||||||    
T  211582 aaatgtaaggactattcttcaaagttacgcaaaatgtagggacaaaaaatatatttaacccta 211644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 15147832 - 15147770
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgta 269  Q
    ||||||| ||||| | |||| ||  ||||||||||||||||||||||||||||||||||||||    
T  15147832 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgta 15147770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 15148149 - 15148241
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||  ||||| |  || |||||||| |||  ||||| |||||||||||||    
T  15148149 aaaaatgtagggattttaaaatcatttattgaaatgtagggactatt-atcaaaattgcgtaaaatatagggaccaaaaacatatttaacccta 15148241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 324
Target Start/End: Original strand, 19579193 - 19579294
Alignment:
Q  223 taacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||| |  |||||||||| |||     ||||||| || ||| ||| |||||||||||||    
T  19579193 taacagagataaaatatagggattttaaaaacatttattgaaatgcagagactattctttaaaaaggtgcaaaatgtatggactaataatatatttaacc 19579292  T
Q  323 ct 324  Q
    ||    
T  19579293 ct 19579294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 17157856 - 17157924
Alignment:
Q  255 atttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||| |||||||||  ||||||||||||||||  |||||||| |||||| |||||| |||||||||||    
T  17157856 atttaatgaaatgtagggactattcttcaaagtggcgcaaaatgtaaggactaaaaacatatttaaccc 17157924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 14713024 - 14713095
Alignment:
Q  250 aaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||||| |||||||||| ||||||||||||||    |||||||| |||| |||||||| |||||||||    
T  14713024 aaaacatttaatgaaatgtaaggactattcttcaaaagagcgcaaaatgtaagaattaaaaacatatttaac 14713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 17157787 - 17157861
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    ||||||| |||||||| |||||||  |||||||||||||||| ||||||||| || |||  ||||| ||||||||    
T  17157787 tttaaaatcatttattaaaatgtacagactattcttcaaagttacgcaaaatgtagggaccaaaaacatatttaa 17157861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 211738 - 211811
Alignment:
Q  249 aaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    ||||| ||||| |||||||||  ||||||||||||||    |||||||| ||||||||||||| ||||||||||    
T  211738 aaaaatatttaatgaaatgtagggactattcttcaaataggcgcaaaatgtaaggattaaaaacatatttaacc 211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 20521275 - 20521182
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||| |||||||||||||||||||||| ||||||| ||  ||||||||||| ||||    |||||| || ||| || ||| |||||||||||||    
T  20521275 aaaattgtagggattttaaaaacattttttgaaatatagggactattcttcgaagttcatcaaaatgtagggactacaaacatatttaacccta 20521182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 19595650 - 19595698
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattctt 281  Q
    ||||| ||||||||||||||| |||||||||||||||  ||||||||||    
T  19595650 aaaatatagggattttaaaaatatttattgaaatgtagggactattctt 19595698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 17157648 - 17157547
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||| ||| | |||||||  |||||||||||| ||||| |||||||||  ||||||||||||| |   || ||||| |||| | |||||| |||||||    
T  17157648 tgataatagagataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaatgaggcgtaaaatgtaagaactaaaaacatattta 17157549  T
Q  320 ac 321  Q
    ||    
T  17157548 ac 17157547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 320
Target Start/End: Complemental strand, 20227147 - 20227059
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    ||||||| |||| |||||||||| |||||||||||| ||   ||||||| ||||| || |||||||||||  ||  ||||||||||||||    
T  20227147 aaaaaatataggaattttaaaaatatttattgaaatataggaactattc-tcaaaatcgcgcaaaatatagagagcaaaaatatatttaa 20227059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 419
Target Start/End: Original strand, 20228176 - 20228249
Alignment:
Q  346 ctgccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||| ||||| || |||||   |||||||| || |||||||||  ||||||| ||||||||||||||||||    
T  20228176 ctgccacatcagcatcccgttagaaatttgacagcagggactatttacgctaacagaggaaaaatgtagggatt 20228249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 320
Target Start/End: Complemental strand, 22121131 - 22121043
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    ||||||| |||| |||||||||| |||||||||||| ||   ||||||| ||||| || |||||||||||  ||  ||||||||||||||    
T  22121131 aaaaaatataggaattttaaaaatatttattgaaatataggaactattc-tcaaaatcgcgcaaaatatagagagcaaaaatatatttaa 22121043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 419
Target Start/End: Original strand, 22122160 - 22122233
Alignment:
Q  346 ctgccacgtcagcttctcgttaattatttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||| ||||| || |||||   |||||||| || |||||||||  ||||||| ||||||||||||||||||    
T  22122160 ctgccacatcagcatcccgttagaaatttgacagcagggactatttacgctaacagaggaaaaatgtagggatt 22122233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 6162368 - 6162320
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  6162368 atttgacaacatggactatttacgctaacggaggaaaaatgtagggatt 6162320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 15147841 - 15147793
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  15147841 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 15147793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 20824287 - 20824239
Alignment:
Q  371 atttgacaacaaggactatttgtgctaacaaaggaaaaatgtagggatt 419  Q
    ||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  20824287 atttgacaacagggactatttacgctaacggaggaaaaatgtagggatt 20824239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 21113107 - 21113067
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaa 284  Q
    |||||||||||||||| |||||||||  |||||||||||||    
T  21113107 attttaaaaacatttaatgaaatgtagagactattcttcaa 21113067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 25932133 - 25932081
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||  | ||||||| ||| || |||||||||||||||||||    
T  25932133 gactattcttcaaaggaaagcaaaatgtaaagactaaaaatatatttaaccct 25932081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 33847980 - 33847864
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| || |||||||||||||||||||||||||||||||||||||||  |||||||| ||||| || || |||||||| |||      
T  33847980 cagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactattc-tcaaaatcgcgtaaaatatagggacc 33847882  T
Q  307 aaaaatatatttaaccct 324  Q
    ||||| ||||||||||||    
T  33847881 aaaaacatatttaaccct 33847864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 322
Target Start/End: Complemental strand, 18443291 - 18443176
Alignment:
Q  206 gcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggat 305  Q
    |||||||| ||||| | |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||  ||||||| || |||     
T  18443291 gcagggactatttacgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgtgcaaaatgtagggac 18443193  T
Q  306 taaaaatatatttaacc 322  Q
     ||||| ||||||||||    
T  18443192 caaaaacatatttaacc 18443176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 18443609 - 18443701
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||| ||||| || |||||||| ||||||  ||||| |||||||||||||    
T  18443609 aaaaatatagggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtaaggaccaaaaacatatttaacccta 18443701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 17075308 - 17075216
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||  ||||||||||||| |||| |||||||||  |||||||||||||||   ||||||||||||||| |||||| |||||||||||||    
T  17075308 aaaatgtgaggattttaaaaacttttaatgaaatgtagggactattcttcaaagcggcgcaaaatataaggactaaaaacatatttaacccta 17075216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 17075618 - 17075709
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||  |||||||||||||||||| |||||||||  |||||||||||||||   |||||||| |||||| |||||| ||||||||||||    
T  17075618 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaaccct 17075709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 325
Target Start/End: Complemental strand, 28898119 - 28898026
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| |||||||||||||    
T  28898119 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacccta 28898026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 322
Target Start/End: Original strand, 49053719 - 49053797
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| |||||| || |||  ||||| ||||||||||    
T  49053719 attttaaaaacatttattgaaatgcaatgactatttttcaaagtcacccaaaatgtatggaccaaaaacatatttaacc 49053797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 1244442 - 1244534
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| ||||||||||||    
T  1244442 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 1244534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 239 - 352
Target Start/End: Original strand, 20544145 - 20544258
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagc 338  Q
    ||||||||||||||||||||||||||||| || ||||||| || ||||||||||||||  || |||  ||||| |||||||||| || ||||| |||       
T  20544145 tagggattttaaaaacatttattgaaatgcaaggactattgtttaaagtcacgcaaaacttagggaccaaaaacatatttaaccataaaaaaattgggat 20544244  T
Q  339 ccactagctgccac 352  Q
    |||||| |||||||    
T  20544245 ccactaactgccac 20544258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 41298675 - 41298767
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||||| ||||||||||||    
T  41298675 aaaaaatgtagggattttaaaaacattcattgaaatgtagggactattc-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccct 41298767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 10466695 - 10466640
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  10466695 ggattataaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaat 10466640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 242 - 325
Target Start/End: Original strand, 16755643 - 16755725
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||| ||||| |||||| ||  ||||||||||||||||  |||||||||| ||||||||||| |||||||||||||    
T  16755643 ggattttaaaaatatttaatgaaatatagagactattcttcaaagtggcgcaaaatat-aggattaaaaacatatttaacccta 16755725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 323
Target Start/End: Complemental strand, 32092330 - 32092227
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    |||||||| | | |||||||  |||||||||||||||||| ||||||| |  |||||||||||||||   |||||||| |||||| |||||| |||||||    
T  32092330 tgataacaaacacaaaatgtgaggattttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggactaaaaacatattta 32092231  T
Q  320 accc 323  Q
    ||||    
T  32092230 accc 32092227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 323
Target Start/End: Complemental strand, 41298334 - 41298243
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |  ||||| ||  ||||||| || |||  ||||| |||||||||||    
T  41298334 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 41298243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 20544321 - 20544398
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    ||||||||||||||||| |||||||||| ||||||||||||||     |||||||||||||| |||||| ||||||||    
T  20544321 gattttaaaaacatttaatgaaatgtaaggactattcttcaaaaaggtgcaaaatataaggactaaaaacatatttaa 20544398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 22954135 - 22954043
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||| |||| |  |  |||||||| ||| |||||| |||||||||||||    
T  22954135 aaaaatgtagggattttaaaaacatttattaaaatgtagggactattct-caaaattgcataaaatatagggactaaaaacatatttaacccta 22954043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 29784370 - 29784427
Alignment:
Q  223 taacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 280  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  29784370 taacagaggaaaaatgtagggattttaaaaatatttattgaaatgtaaagactattct 29784427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 884772 - 884728
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  884772 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 884728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 1244101 - 1244057
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  1244101 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 1244057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 5029611 - 5029707
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataagga-ttaaaaatatatttaaccctagaaaaaatggagcccactagctgccacgtcagc 358  Q
    |||||||| ||||||||||||||||||||||||||||| |||   ||||| ||||||||||||| || || |||  ||||||| ||||||| |||||    
T  5029611 aaatgtaaggactattcttcaaagtcacgcaaaatatagggaccaaaaaacatatttaaccctaaaataattgggacccactaactgccacatcagc 5029707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 18920159 - 18920079
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||| ||||||||||||||| | |||||||||| ||||||||||| | || | |||||| |||||| ||||||||||    
T  18920159 ggattttacaaacatttattgaaaggaaatgactatttttcaaagtcactctaattgtaaggactaaaaacatatttaacc 18920079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 367
Target Start/End: Complemental strand, 28838604 - 28838480
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccac 342  Q
    ||||||||||||||||||| |||||||| || |||| |||||| | | ||||||| || |||  ||||| |||||||||| || || || |||| |||||    
T  28838604 gattttaaaaacatttattaaaatgtaaggattatttttcaaaatgatgcaaaatgtagggaccaaaaacatatttaaccttaaaataattggaacccac 28838505  T
Q  343 tagctgccacgtcagcttctcgtta 367  Q
    || ||||||| ||||| | ||||||    
T  28838504 taactgccacatcagcatttcgtta 28838480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 28898460 - 28898504
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgacta 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  28898460 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 28898504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 30939564 - 30939656
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||||||||||||||||| ||||| |||||||||  ||||||||||| || |  || ||||| || ||| |||||| ||||||||||||    
T  30939564 aaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcgaaatggcgtaaaatgtagggactaaaaacatatttaaccct 30939656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 5029767 - 5029842
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||||||||| |||||| ||  |||||||||||||||  ||||||||| ||| || ||||||||||||||||    
T  5029767 tttaaaaacatttaatgaaatatagggactattcttcaaagagacgcaaaatgtaacgactaaaaatatatttaac 5029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 311
Target Start/End: Original strand, 22948866 - 22948957
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaa 311  Q
    ||||||| || | |||||||  |||||||||||||||||| |||||||||  |||||||||||||||   |||||||| |||||| ||||||    
T  22948866 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagagactattcttcaaagggtcgcaaaatgtaaggactaaaaa 22948957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 27310207 - 27310087
Alignment:
Q  166 tgccacatcaccattctgtttggtgactggacagaa----gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttatt 261  Q
    |||||||||| |||| |||||||||||| ||  |||    |||||||||||||| || || |||| |   |||||||||||||||||||||||||||| |    
T  27310207 tgccacatcagcattatgtttggtgactagatggaaaatagacggcagggaccaattttgttaacggtagaaaaatgtagggattttaaaaacatttaat 27310108  T
Q  262 gaaatgtaatgactattcttc 282  Q
    ||||||||  ||| |||||||    
T  27310107 gaaatgtagggaccattcttc 27310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 323
Target Start/End: Complemental strand, 28854779 - 28854676
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  |||||||||||||||||| | |||||||  || ||||||| |||    |||||||||||||||||||||| |||||||    
T  28854779 tgataactgaaataaaatgtgaggattttaaaaacatttaataaaatgtagggagtattctttaaatgggcgcaaaatataaggattaaaaacatattta 28854680  T
Q  320 accc 323  Q
    ||||    
T  28854679 accc 28854676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 322
Target Start/End: Complemental strand, 29784025 - 29783935
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||||||| ||||||||||||||||||||||| ||  |||||||| ||||| || | |||||| || ||| |||||| ||||||||||    
T  29784025 aaaaaatgtaggaattttaaaaacatttattgaaatatagggactattc-tcaaaatcgcacaaaatgtagggactaaaaacatatttaacc 29783935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 10466790 - 10466872
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
    ||||||||||||||||| | |||| ||  ||||||||||||||   ||||||||| ||| ||||||||| |||||||||||||    
T  10466790 gattttaaaaacatttaataaaatatagagactattcttcaaatagacgcaaaatgtaaagattaaaaacatatttaacccta 10466872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 357
Target Start/End: Complemental strand, 32092460 - 32092366
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactagctgccacgtcag 357  Q
    |||||||| ||||||||||||||||||||||||||||| |||  | ||| |||||||| |||| || || |||  ||||||| ||||||| ||||    
T  32092460 aaatgtaaggactattcttcaaagtcacgcaaaatatagggaccacaaacatatttaatcctaaaataattgggacccactaactgccacatcag 32092366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 323
Target Start/End: Complemental strand, 20543991 - 20543910
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||||| ||||| |||||||||  |||||||||||||||   | |||||| |||| |||||||| |||||||||||    
T  20543991 ggattttaaaaaaatttaatgaaatgtagggactattcttcaaaggggcacaaaatgtaagaattaaaaacatatttaaccc 20543910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 27311047 - 27311120
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataagga 304  Q
    |||||||||||| |||||||||||||||| |||||||||  |||||||||| ||||   |||||||| ||||||    
T  27311047 aaaaaatgtaggaattttaaaaacatttaatgaaatgtagggactattctttaaagaggcgcaaaatgtaagga 27311120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 320
Target Start/End: Complemental strand, 30938686 - 30938597
Alignment:
Q  231 aaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    |||||||||||| |||||||||||||||| | |||||||  || ||||||| ||||   |||||||| |||||| |||||| ||||||||    
T  30938686 aaaaaatgtaggaattttaaaaacatttaataaaatgtatggattattctttaaagaggcgcaaaatgtaaggactaaaaacatatttaa 30938597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 33848297 - 33848346
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgtaatgactattctt 281  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  33848297 aaaaatgtaggaattttaaaaacatttattgaaatgtagggactattctt 33848346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 44803644 - 44803721
Alignment:
Q  244 attttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||||||||||| |||||||||  |||||||||| ||||   |||||||| |||||| |||||| |||||||||    
T  44803644 attttaaaaacatttaatgaaatgtagagactattctttaaagaagcgcaaaatgtaaggactaaaaacatatttaac 44803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 351
Target Start/End: Original strand, 17075476 - 17075563
Alignment:
Q  263 aaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactagctgcca 351  Q
    |||||||| |||||||||||||||||||||||||| || |||  | ||| ||||||||||||| || || |||| ||||||| ||||||    
T  17075476 aaatgtaaggactattcttcaaagtcacgcaaaatgtagggagcagaaacatatttaaccctaaaataattgga-cccactaactgcca 17075563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 11974753 - 11974666
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    |||||||  |||||||||||||||||| |||||||||  ||||||| |||||||   |||||||| |||||| |||||  ||||||||    
T  11974753 aaaatgtgaggattttaaaaacatttaatgaaatgtacagactatttttcaaaggagcgcaaaatgtaaggactaaaatcatatttaa 11974666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 323
Target Start/End: Complemental strand, 28852782 - 28852692
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||  |||||||||||||||||| |||||||||  || |||| || |||   || |||||| ||||||||||||| |||||||||||    
T  28852782 aaaatgtgaggattttaaaaacatttaatgaaatgtagggagtattatttaaatggacacaaaatgtaaggattaaaaacatatttaaccc 28852692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 17075467 - 17075418
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaa 295  Q
    ||||||| |||||||| |||| ||| ||||||||||||||||||||||||    
T  17075467 tttaaaagcatttattaaaatataaggactattcttcaaagtcacgcaaa 17075418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 11974894 - 11974975
Alignment:
Q  236 atgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    ||||||| |||||||||||||||||||||||| || |||||||     |||||||||||||| || |||  ||||| |||||||||    
T  11974894 atgtaggaattttaaaaacatttattgaaatgcaaagactatt----taagtcacgcaaaatgtagggaccaaaaacatatttaac 11974975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 325
Target Start/End: Original strand, 12933008 - 12933154
Alignment:
Q  183 gtttggtgactggaca-gaa---gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 278  Q
    |||||||||||||||| |||   |||||||||||| |  | || ||||||||| |||||||  |||||||| ||||||||| | |||| ||  |||||||    
T  12933008 gtttggtgactggacatgaaattgacggcagggactaaatttggtaacagatataaaatgtgaggattttagaaacatttacttaaatatagggactatt 12933107  T
Q  279 cttcaaagtcacgcaaaatataaggattaaaaatatatttaacccta 325  Q
      ||||||  || |||||| || ||| |||||| |||||||||||||    
T  12933108 tatcaaaggaacacaaaatgtagggactaaaaacatatttaacccta 12933154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 22948745 - 22948825
Alignment:
Q  272 gactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactagctgccac 352  Q
    |||||||||||||||||| ||||||| || |||| ||||| ||||||||||| | || || |||  ||||||| |||||||    
T  22948745 gactattcttcaaagtcatgcaaaatgtagggataaaaaacatatttaaccccaaaataattgggacccactaactgccac 22948825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 6621117 - 6621207
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccct 324  Q
    |||||||  ||||||||||| |||||| |||||||||  |||||||||||||||   | |||||| |||| |||||||| ||||| ||||||    
T  6621117 aaaatgtgaggattttaaaa-catttaatgaaatgtagggactattcttcaaagggtcacaaaatgtaagaattaaaaacatattgaaccct 6621207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 11992794 - 11992715
Alignment:
Q  242 ggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||||||||||| | | |||||||  ||| |||||| ||||   |||||||||||| ||||||||| |||||||||    
T  11992794 ggattttaaaaacattaaataaaatgtagggacaattctttaaagatgcgcaaaatataaagattaaaaacatatttaac 11992715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 23548841 - 23548924
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||| |||||||||  |||||||||||| |||  |||||| |  ||||||||||||||| || |||  ||||||||||||||||    
T  23548841 taggaattttaaaagtatttattgaaatataagaactattttctaaagtcacgcaaaatgtagggaccaaaaatatatttaacc 23548924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 23548115 - 23548053
Alignment:
Q  261 tgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccc 323  Q
    |||||||||  || ||||||||||||   ||||||||||||||| |||||| |||||||||||    
T  23548115 tgaaatgtagggattattcttcaaagaagcgcaaaatataaggactaaaaacatatttaaccc 23548053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 18152858 - 18152753
Alignment:
Q  220 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatattta 319  Q
    ||||||| || | |||||||  ||||||||| ||||||||   |||||||  |||||||||||||||   |||||||| |||| | | |||| |||||||    
T  18152858 tgataacggagataaaatgtgaggattttaagaacatttaacaaaatgtagggactattcttcaaaggggcgcaaaatgtaagaactgaaaacatattta 18152759  T
Q  320 acccta 325  Q
    ||||||    
T  18152758 acccta 18152753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 42750119 - 42750172
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaag 286  Q
    |||||||  ||||||||||||| |||| |||||||||  |||||||||||||||    
T  42750119 aaaatgtgaggattttaaaaacgtttaatgaaatgtagggactattcttcaaag 42750172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 107974 - 107895
Alignment:
Q  243 gattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaacc 322  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||| || |||  ||||| ||||||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaaatcacggaaaatgtagggaccaaaaacatatttaacc 107895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 107834 - 107721
Alignment:
Q  210 ggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaa 309  Q
    |||| |||| ||||||| || | |||||||  |||||||||||| |||||||||||||||  |||||||||||||||   |||||| | |||||  ||||    
T  107834 ggactatttttgataacggagataaaatgtgaggattttaaaaatatttattgaaatgtagggactattcttcaaaggagcgcaaagtgtaaggtctaaa 107735  T
Q  310 aatatatttaaccc 323  Q
    || |||||||||||    
T  107734 aacatatttaaccc 107721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 358
Target Start/End: Original strand, 107992 - 108075
Alignment:
Q  275 tattcttcaaagtcacgcaaaatataaggattaaaaatatatttaaccctagaaaaaatggagcccactagctgccacgtcagc 358  Q
    ||||||||||||||||||||||| || |||  ||||| ||||||||||||| || || |||  ||||||| ||||||| |||||    
T  107992 tattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaaccctaaaataattgggacccactaactgccacatcagc 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 39827 - 39943
Alignment:
Q  207 cagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggatt 306  Q
    ||||||| ||||| | |||| ||  ||||||||| ||||||||||||||||||||||||||||  |||||||| ||||| || || ||||| || |||      
T  39827 cagggactatttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtagggactattc-tcaaaatcgcgtaaaatgtagggacc 39925  T
Q  307 aaaaatatatttaaccct 324  Q
    ||||| ||||||||||||    
T  39926 aaaaacatatttaaccct 39943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 39510 - 39473
Alignment:
Q  232 aaaaatgtagggattttaaaaacatttattgaaatgta 269  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39510 aaaaatgtagggattttaaaaacatttattgaaatgta 39473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 321
Target Start/End: Original strand, 35193 - 35281
Alignment:
Q  233 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaac 321  Q
    |||||||  |||||||||||||||| | | |||||||  |||||||||||||||  ||||||||| |||||| |||||| |||||||||    
T  35193 aaaatgtgaggattttaaaaacattcaataaaatgtagagactattcttcaaagggacgcaaaatgtaaggactaaaaacatatttaac 35281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 34868 - 34794
Alignment:
Q  246 tttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaatataaggattaaaaatatatttaa 320  Q
    |||||||||||||| |||||||||  ||| ||| ||||||   |||||||||||||||| |||||| ||||||||    
T  34868 tttaaaaacatttaatgaaatgtatggaccattattcaaatagacgcaaaatataaggactaaaaacatatttaa 34794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 35048 - 34990
Alignment:
Q  239 tagggattttaaaaacatttattgaaatgtaatgactattcttcaaagtcacgcaaaat 297  Q
    ||||||||||| ||||||||||| ||| |||| || ||||  |||||||||||||||||    
T  35048 tagggattttagaaacatttattaaaacgtaaggaatatttctcaaagtcacgcaaaat 34990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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