View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18236_low_15 (Length: 356)
Name: NF18236_low_15
Description: NF18236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18236_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 119 - 338
Target Start/End: Complemental strand, 490306 - 490087
Alignment:
| Q |
119 |
tcataagtttgaaagtttcaataatcttcatcctatgctcagaatatatactgaacaaaggaccattttgaagaagtaggccatggtatttgaatcacaa |
218 |
Q |
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| T |
490306 |
tcataagtttgaaagtttcaataatcttcatcctatgctcagaatatatactgaacaaaggaccattttgaagaactaggccatggtacttgaatcacaa |
490207 |
T |
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| Q |
219 |
ccatgaactctttatattcaaaatcaacttctttgccatcaattccacaagcccttggtttctctgaagcatagaccctcatctcaccagcacctctaat |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
490206 |
ccatgaactctttatattcaaaatcaacttctttgccatcaattccacaagcccttggtttctctgaagcatagaccctcatctcaccagcacctctaat |
490107 |
T |
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| Q |
319 |
tccaacttgcaccaaatctt |
338 |
Q |
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|||||||||||||||||||| |
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| T |
490106 |
tccaacttgcaccaaatctt |
490087 |
T |
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