View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18237_high_4 (Length: 525)
Name: NF18237_high_4
Description: NF18237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18237_high_4 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 446; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 17 - 509
Target Start/End: Complemental strand, 2451597 - 2451096
Alignment:
| Q |
17 |
atttggaagctatgagacaatcaatttccatgttaaacaactcctccatcaccaattcttatttgtaaacttttaaacaaggaacttgatcttagttatt |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2451597 |
atttggaagctatgagacaatcaatttccacgttaaacaactcctccatcaccaattcttatttgtaaacttttaaacaaggaacctgatcttagttatt |
2451498 |
T |
|
| Q |
117 |
taattgatttcctgtgta---------gtgtcagcaattgtattgggtggtcttctttgtagacttaccatagagtaataagctccacttggtcctttag |
207 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2451497 |
taattgatttcctgtgtacagtgtgtagtgtcagcaattgtattgggtggtcttctttgtagacttaccatagagtaataagctccacttggtcctttag |
2451398 |
T |
|
| Q |
208 |
acaacaaagatgaatgtgttcctttctcaataacactacccttatccaaaacaacaatcaaatcacaattttgtatagtactcaacctatgagccacaac |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2451397 |
acaacaaagatgaatgtgttcctttctcaataacactacccttatccaaaacaacaatcatatcacaattttgtatagtactcaacctatgagccacaac |
2451298 |
T |
|
| Q |
308 |
cacacttgtccttccaatcataaccctttctaaagcatcttgcactaacttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacc |
407 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2451297 |
cacacttgttcttccaatcataaccctttctaaagcatcttgcactaacttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacc |
2451198 |
T |
|
| Q |
408 |
tttggattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttgaactcctctatcaccacacaatgtatcataaccatctt |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
2451197 |
tttggattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttgaactcctctatcaccacacaatgtctcataaccatatt |
2451098 |
T |
|
| Q |
508 |
tt |
509 |
Q |
| |
|
|| |
|
|
| T |
2451097 |
tt |
2451096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 112 - 507
Target Start/End: Original strand, 2640768 - 2641163
Alignment:
| Q |
112 |
ttatttaattgatttcctgtgtagtgtcagcaattgtattgggtggtcttctttgtagacttaccatagagtaataagctccacttggtcctttagacaa |
211 |
Q |
| |
|
||||||| |||||||| |||| || || |||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||| |||||| |
|
|
| T |
2640768 |
ttatttagttgatttcatgtgaagaaccaacaattgtattggttggtcttctttgtagacttactaaagagtaataaactccacttggtcccaaagacaa |
2640867 |
T |
|
| Q |
212 |
caaagatgaatgtgttcctttctcaataacactacccttatccaaaacaacaatcaaatcacaattttgtatagtactcaacctatgagccacaaccaca |
311 |
Q |
| |
|
||||||||||||||||||||| |||| |||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| |
|
|
| T |
2640868 |
caaagatgaatgtgttcctttttcaacaacaatccccttatccaaaacagcaatcaaatcacaattttgtatagtactcaacctatgtgcgacaactaca |
2640967 |
T |
|
| Q |
312 |
cttgtccttccaatcataaccctttctaaagcatcttgcactaacttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacctttg |
411 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
2640968 |
cttgtccttccaaccataactctttctaaagcatcttgcactaatttctctgattgactatcaagtgcacttgttgcttcatccaaaagtaacacctttg |
2641067 |
T |
|
| Q |
412 |
gattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttgaactcctctatcaccacacaatgtatcataaccatctt |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2641068 |
gattcttcaatatagctctagctattgcaatcctttgtttttgaccaccactaagttgaactcctctatcaccacacaatgtatcataaccatctt |
2641163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 150 - 509
Target Start/End: Original strand, 2671966 - 2672325
Alignment:
| Q |
150 |
ttgggtggtcttctttgtagacttaccatagagtaataagctccacttggtcctttagacaacaaagatgaatgtgttcctttctcaataacactaccct |
249 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
2671966 |
ttggttggtcttctttgtagacttaccaaagagtaataagctccacttggccctttagacaacaaagatgaatgtgttcctttctcaacaacacttccct |
2672065 |
T |
|
| Q |
250 |
tatccaaaacaacaatcaaatcacaattttgtatagtactcaacctatgagccacaaccacacttgtccttccaatcataaccctttctaaagcatcttg |
349 |
Q |
| |
|
| || |||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2672066 |
tgtctaaaacagcaatcaaatcgcaattttgtatagtactcaacctatgtgctacaaccacacttgtccttccaaccataaccctttctaaagcatcttg |
2672165 |
T |
|
| Q |
350 |
cactaacttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacctttggattcttcaatatagctctagctattgcaatcctttgc |
449 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2672166 |
gactaatttctcagattgactatcaagtgcacttgttgcttcatccaaaagcaacacctctggattcttcaatatagctctagctattgcaattctttgt |
2672265 |
T |
|
| Q |
450 |
ttttgaccaccagaaagttgaactcctctatcaccacacaatgtatcataaccatctttt |
509 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
2672266 |
ttttgaccaccactaagttgaactcctctgtcaccacacaaagtatcataaccatctttt |
2672325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 138 - 509
Target Start/End: Complemental strand, 2440745 - 2440374
Alignment:
| Q |
138 |
tcagcaattgtattgggtggtcttctttgtagacttaccatagagtaataagctccacttggtcctttagacaacaaagatgaatgtgttcctttctcaa |
237 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2440745 |
tcagcaattatattgtttggtcttctttgtagacttaccaaagagtaatatgctccacttggccctttagacaacaaagatgaatgtgttcctttctcaa |
2440646 |
T |
|
| Q |
238 |
taacactacccttatccaaaacaacaatcaaatcacaattttgtatagtactcaacctatgagccacaaccacacttgtccttccaatcataaccctttc |
337 |
Q |
| |
|
|||| | ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||| ||| ||| |||| |
|
|
| T |
2440645 |
caacaattcccttatccaaaacagcaatcaaatcacagttttgaatagtactcaacctatgtgctacaaccacgcttgtccttccaaccatgaccttttc |
2440546 |
T |
|
| Q |
338 |
taaagcatcttgcactaacttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacctttggattcttcaatatagctctagctatt |
437 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2440545 |
taaagcatcttggactaatttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacctctggattcttcaatatagctctagctatt |
2440446 |
T |
|
| Q |
438 |
gcaatcctttgcttttgaccaccagaaagttgaactcctctatcaccacacaatgtatcataaccatctttt |
509 |
Q |
| |
|
||||| ||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2440445 |
gcaattctttgtttttgaccaccactaagttgaactcctctatcaccacacagtgtatcataaccatctttt |
2440374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 155 - 509
Target Start/End: Original strand, 2568596 - 2568950
Alignment:
| Q |
155 |
tggtcttctttgtagacttaccatagagtaataagctccacttggtcctttagacaacaaagatgaatgtgttcctttctcaataacactacccttatcc |
254 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||| |||||||| ||||| ||||| ||| |||||||||||||||||||| |||| | ||||||||| |
|
|
| T |
2568596 |
tggtcttctttgcagacttaccaaagagtaataagcaccacttggcccttttgacaataaatttgaatgtgttcctttctcaacaacaatgcccttatcc |
2568695 |
T |
|
| Q |
255 |
aaaacaacaatcaaatcacaattttgtatagtactcaacctatgagccacaaccacacttgtccttccaatcataaccctttctaaagcatcttgcacta |
354 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
2568696 |
aaaacagcaatcaaatcacaattttgtatagtactcaacctatgtgccacaaccacacttgtccttccaaccataaccctttctaaagcatcttggacta |
2568795 |
T |
|
| Q |
355 |
acttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacctttggattcttcaatatagctctagctattgcaatcctttgcttttg |
454 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
2568796 |
atttctcagattgactatcaagtgcacttgttgcttcatccaaaagcaacacctctggattcttcaatatagctctagctattgcaattctttgtttttg |
2568895 |
T |
|
| Q |
455 |
accaccagaaagttgaactcctctatcaccacacaatgtatcataaccatctttt |
509 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2568896 |
accaccactaagttgaactcctctatcaccacacaatgtatcataaccatctttt |
2568950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 112 - 509
Target Start/End: Original strand, 2596110 - 2596509
Alignment:
| Q |
112 |
ttatttaattgatttcctgtgtagtgtcagcaattgtattgggtg--gtcttctttgtagacttaccatagagtaataagctccacttggtcctttagac |
209 |
Q |
| |
|
||||||| |||||||| |||| || ||| |||||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||| ||| |
|
|
| T |
2596110 |
ttatttagttgatttcatgtgaagaatcaacaattgtattggttatagtcttctttgtagacttaccaaagagtaataaactccacttggtcccaaagat |
2596209 |
T |
|
| Q |
210 |
aacaaagatgaatgtgttcctttctcaataacactacccttatccaaaacaacaatcaaatcacaattttgtatagtactcaacctatgagccacaacca |
309 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||| | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
2596210 |
aacaaagacgaatgtgttcctttctcaacaacaattcccttatccaagacagcaatcaaatcacaattttgtatagtactcaacctatgtgccacaacca |
2596309 |
T |
|
| Q |
310 |
cacttgtccttccaatcataaccctttctaaagcatcttgcactaacttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacctt |
409 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2596310 |
cacttgtccttccaaccataaccctttctaaagtatcttggactaatttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacctc |
2596409 |
T |
|
| Q |
410 |
tggattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttgaactcctctatcaccacacaatgtatcataaccatctttt |
509 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2596410 |
tggattcttcaatatagctctagctattgcaattctttgtttttgaccaccactaagttgaactcctctatcaccacacagtgtatcataaccatctttt |
2596509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 99 - 509
Target Start/End: Complemental strand, 2592730 - 2592320
Alignment:
| Q |
99 |
aacttgatcttagttatttaattgatttcctgtgtagtgtcagcaattgtattgggtggtcttctttgtagacttaccatagagtaataagctccacttg |
198 |
Q |
| |
|
|||||||| || ||||||| |||||||| |||| || ||| |||| | |||| ||||||| ||| |||||||| || ||||||||| |||||||||| |
|
|
| T |
2592730 |
aacttgatattgtttatttagttgatttcatgtgaagaatcaataattatgttggttggtcttatttttagacttatcaaagagtaatatgctccacttg |
2592631 |
T |
|
| Q |
199 |
gtcctttagacaacaaagatgaatgtgttcctttctcaataacactacccttatccaaaacaacaatcaaatcacaattttgtatagtactcaacctatg |
298 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
2592630 |
gccctttagacaacaaagatgaatgtgttcctttctcaataacacttcccttatccaaaacagcaatcaaatcacagttttggatagtactcaacctatg |
2592531 |
T |
|
| Q |
299 |
agccacaaccacacttgtccttccaatcataaccctttctaaagcatcttgcactaacttctctgattgactatcaagtgcacttgttgcttcatccaaa |
398 |
Q |
| |
|
|| |||||||| ||||||||||||| ||| ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2592530 |
tgctacaaccacgcttgtccttccaaccatgaccttttctaaagcatcttggactaatttctctgattgactatcaagtgcacttgttgcttcatccaaa |
2592431 |
T |
|
| Q |
399 |
agcaacacctttggattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttgaactcctctatcaccacacaatgtatcat |
498 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
2592430 |
agcaacacctctggattcttcaatatagctctagctattgcaattctttgtttttgaccaccactaagttgaactcctctatcaccacacagtgtatcat |
2592331 |
T |
|
| Q |
499 |
aaccatctttt |
509 |
Q |
| |
|
||||||||||| |
|
|
| T |
2592330 |
aaccatctttt |
2592320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 112 - 509
Target Start/End: Complemental strand, 2624261 - 2623864
Alignment:
| Q |
112 |
ttatttaattgatttcctgtgtagtgtcagcaattgtattgggtggtcttctttgtagacttaccatagagtaataagctccacttggtcctttagacaa |
211 |
Q |
| |
|
||||||| || ||||| |||| || ||| ||||| | |||| ||||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||| |
|
|
| T |
2624261 |
ttatttatttaatttcatgtggagaatcaacaattatgttggttggtcttttttgtagacttatcaaagagtaatatgctccacttggccctttagacaa |
2624162 |
T |
|
| Q |
212 |
caaagatgaatgtgttcctttctcaataacactacccttatccaaaacaacaatcaaatcacaattttgtatagtactcaacctatgagccacaaccaca |
311 |
Q |
| |
|
||| |||||||||||||| ||||||| |||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| || |||||||| |
|
|
| T |
2624161 |
caaggatgaatgtgttccattctcaacaacacttcccttatccaaaacagcaatcaaatcacagttttggatagtactcaacctatgtgctacaaccacg |
2624062 |
T |
|
| Q |
312 |
cttgtccttccaatcataaccctttctaaagcatcttgcactaacttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacctttg |
411 |
Q |
| |
|
||||||||||||| ||| ||| ||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | || |
|
|
| T |
2624061 |
cttgtccttccaaccatgaccttttctaaagtgtcttggactaatttctcagattgactatcaagtgcacttgttgcttcatccaaaagcaacacatctg |
2623962 |
T |
|
| Q |
412 |
gattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttgaactcctctatcaccacacaatgtatcataaccatctttt |
509 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||| |
|
|
| T |
2623961 |
gattctttaatatagctctagctattgcaattctttgtttttgaccaccactaagttgaactcctctgtcaccacacaatgtgtcatatccatctttt |
2623864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 3431209 - 3431279
Alignment:
| Q |
407 |
ctttggattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttgaactcctc |
477 |
Q |
| |
|
||||||||| ||||| |||||||| || |||||||||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
3431209 |
ctttggatttttcaacatagctcttgcaattgcaatcctttgcttttgtccaccagataattgaactcctc |
3431279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 29329570 - 29329626
Alignment:
| Q |
414 |
ttcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttga |
470 |
Q |
| |
|
||||||||||| || ||||| |||||||| ||||||||||| || |||||||||||| |
|
|
| T |
29329570 |
ttcttcaatattgccctagcaattgcaattctttgcttttgccctccagaaagttga |
29329626 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 255 - 508
Target Start/End: Original strand, 17870107 - 17870360
Alignment:
| Q |
255 |
aaaacaacaatcaaatcacaattttgtatagtactcaacctatgagccacaaccacacttgtccttccaatcataaccctttctaaagcatcttgcacta |
354 |
Q |
| |
|
|||||| |||| | ||||||||| ||||| |||||||||||||| || ||||||||||| |||||||||| ||| ||| | | || ||||||||||||| |
|
|
| T |
17870107 |
aaaacagcaataacatcacaattgtgtatggtactcaacctatgtgctacaaccacactagtccttccaaccattaccttattcaatgcatcttgcacta |
17870206 |
T |
|
| Q |
355 |
acttctctgattgactatcaagtgcacttgttgcttcatccaaaagcaacacctttggattcttcaatatagctctagctattgcaatcctttgcttttg |
454 |
Q |
| |
|
||| ||||| | | ||||||||||||||||||||||||| | |||||||||||||||||||||||| || |||||||||||||| |||||||| ||||| |
|
|
| T |
17870207 |
ccttttctgaattattatcaagtgcacttgttgcttcatctagaagcaacacctttggattcttcaacatggctctagctattgctatcctttgtttttg |
17870306 |
T |
|
| Q |
455 |
accaccagaaagttgaactcctctatcaccacacaatgtatcataaccatcttt |
508 |
Q |
| |
|
|| || |||||||| |||||| | || |||||| |||| ||||| |||||||| |
|
|
| T |
17870307 |
cccccctgaaagttgcactcctttgtccccacaccatgtctcatacccatcttt |
17870360 |
T |
|
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Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 470
Target Start/End: Complemental strand, 5766170 - 5766109
Alignment:
| Q |
409 |
ttggattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttga |
470 |
Q |
| |
|
|||| ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
5766170 |
ttgggttcttcaatattgccctagcaattgcaattctttgcttttgtccaccagaaagttga |
5766109 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 470
Target Start/End: Complemental strand, 5823563 - 5823502
Alignment:
| Q |
409 |
ttggattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttga |
470 |
Q |
| |
|
|||||||||||||||| || || || |||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
5823563 |
ttggattcttcaatatggcccttgcaattgcaattctttgcttttgtccaccagaaagttga |
5823502 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 5832005 - 5832098
Alignment:
| Q |
377 |
tgcacttgttgcttcatccaaaagcaacacctttggattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttga |
470 |
Q |
| |
|
|||||||||||||||||| | ||| | | ||||| ||||||||||| || || || |||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
5832005 |
tgcacttgttgcttcatcaagaagaaggatttttgggttcttcaatattgcccttgcaattgcaattctttgcttttgtccaccagaaagttga |
5832098 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 410 - 499
Target Start/End: Complemental strand, 39157765 - 39157676
Alignment:
| Q |
410 |
tggattcttcaatatagctctagctattgcaatcctttgcttttgaccaccagaaagttgaactcctctatcaccacacaatgtatcata |
499 |
Q |
| |
|
|||||||||||| || |||||||||||||| ||||||||||| || || || || || || |||||||| || ||||| |||||||||| |
|
|
| T |
39157765 |
tggattcttcaacattgctctagctattgctatcctttgcttctgtcctcctgatagctgcactcctctttctccacagtatgtatcata |
39157676 |
T |
|
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