View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18238_high_31 (Length: 219)
Name: NF18238_high_31
Description: NF18238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18238_high_31 |
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Alignment Details
Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 34 - 204
Target Start/End: Original strand, 38091158 - 38091328
Alignment:
| Q |
34 |
tagagaatttagctcttaaaccatgaattttcacatacttcttacttggaactnnnnnnnncaatgcaggggagaatccgatccataagagacatcatca |
133 |
Q |
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| T |
38091158 |
tagagaatttagctcttaaaccatgaattttcacatacttcttacttggaactaaaaaaaacaatgcaggggagaatccgatccataagagacatcatca |
38091257 |
T |
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| Q |
134 |
attttatttataattgtatatcaaatagaaatcagattgaatttattaatcctctcaaatgagatccatat |
204 |
Q |
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| T |
38091258 |
attttatttataattgtatatcaaatagaaatcagattgaatttattaatcctctcaaaagagatccatat |
38091328 |
T |
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