View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18238_low_17 (Length: 373)

Name: NF18238_low_17
Description: NF18238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18238_low_17
NF18238_low_17
[»] chr5 (5 HSPs)
chr5 (16-288)||(21520699-21520971)
chr5 (16-288)||(21531265-21531537)
chr5 (149-261)||(27868078-27868190)
chr5 (131-261)||(2308606-2308739)
chr5 (184-235)||(16597745-16597796)
[»] chr6 (5 HSPs)
chr6 (116-363)||(27984461-27984709)
chr6 (24-124)||(27925232-27925332)
chr6 (288-363)||(27889513-27889588)
chr6 (245-291)||(10143987-10144033)
chr6 (109-171)||(5092200-5092262)
[»] chr8 (2 HSPs)
chr8 (70-288)||(37804118-37804347)
chr8 (239-293)||(44605256-44605310)
[»] chr4 (1 HSPs)
chr4 (42-288)||(29011467-29011714)
[»] chr2 (3 HSPs)
chr2 (42-215)||(8851642-8851815)
chr2 (244-288)||(8851061-8851105)
chr2 (245-282)||(12433664-12433701)
[»] chr3 (4 HSPs)
chr3 (65-288)||(20029593-20029826)
chr3 (239-288)||(2145362-2145411)
chr3 (161-235)||(42108284-42108358)
chr3 (111-235)||(35231810-35231934)
[»] chr1 (3 HSPs)
chr1 (240-288)||(29466265-29466313)
chr1 (121-236)||(23473768-23473883)
chr1 (111-235)||(35306754-35306878)
[»] chr7 (3 HSPs)
chr7 (245-288)||(28301570-28301613)
chr7 (167-235)||(29428919-29428987)
chr7 (189-249)||(47920797-47920857)


Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 288
Target Start/End: Complemental strand, 21520971 - 21520699
Alignment:
Q  16 aaagatgataaagaacagtgagctagaaatagatatatgtgtgatcattgaaagattgacaggacatattagtaataaactaattacaatgagtgattcc 115  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  21520971 aaagatgataaagaacagcgagctagaaatagatatatgtgtgatcattgaaaaattgaaaggacatattagtaataaactaattacaatgagtgattcc 21520872  T
Q  116 atcccatacctccctaattggaggggaagaaaaataagaggagaggatggaatggaatggtattgatcccatcatgttccatcccattccatccattttt 215  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21520871 atcccatacctcctaaattggaggggaagaaaaataagaggagaggatggaatggaatggtattgatcccatcatattccatcccattccatccattttt 21520772  T
Q  216 aaaaaatgcaaacaatggaatatcattccattccatcccattccatctcaaaccactaatccaaacagagcct 288  Q
    ||||||| || |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  21520771 aaaaaatccagacaatggaatatcattccattccatttcattccatctcaaaccactaatccaaacagagcct 21520699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 288
Target Start/End: Complemental strand, 21531537 - 21531265
Alignment:
Q  16 aaagatgataaagaacagtgagctagaaatagatatatgtgtgatcattgaaagattgacaggacatattagtaataaactaattacaatgagtgattcc 115  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  21531537 aaagatgataaagaacagcgagctagaaatagatatatgtgtgatcattgaaaaattgaaaggacatattagtaataaactaattacaatgagtgattcc 21531438  T
Q  116 atcccatacctccctaattggaggggaagaaaaataagaggagaggatggaatggaatggtattgatcccatcatgttccatcccattccatccattttt 215  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21531437 atcccatacctcctaaattggaggggaagaaaaataagaggagaggatggaatggaatggtattgatcccatcatattccatcccattccatccattttt 21531338  T
Q  216 aaaaaatgcaaacaatggaatatcattccattccatcccattccatctcaaaccactaatccaaacagagcct 288  Q
    ||||||| || |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  21531337 aaaaaatccagacaatggaatatcattccattccatttcattccatctcaaaccactaatccaaacagagcct 21531265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 27868190 - 27868078
Alignment:
Q  149 ataagaggagaggatggaatggaatggtattgatcccatcatgttccatcccattccatccatttttaaaaaatgcaaacaatggaatatcattccattc 248  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||    
T  27868190 ataagaggagaggatggaatgaaatggtattgatccgatcatattccatcccattccatccatttttaaaaaatccaaacaatggaatatcaattcattc 27868091  T
Q  249 catcccattccat 261  Q
    |||||||||||||    
T  27868090 catcccattccat 27868078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 2308606 - 2308739
Alignment:
Q  131 aattggaggggaagaaaaataagaggagaggatggaatggaatggtattgatcccatcatgttccatcccattccatccatttttaaaaaa---tgcaaa 227  Q
    |||||||||||||||||||| || | |||||| | ||||| |||| || ||||||||||| | |||  ||||||||| |||||||||||||   |  |||    
T  2308606 aattggaggggaagaaaaattagggaagaggaggaaatgggatggaatggatcccatcatataccactccattccattcatttttaaaaaaaaatctaaa 2308705  T
Q  228 caatggaatatcattccattccatcccattccat 261  Q
    |||||||||  |||||||| |||  |||||||||    
T  2308706 caatggaatcacattccataccactccattccat 2308739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 16597745 - 16597796
Alignment:
Q  184 ccatcatgttccatcccattccatccatttttaaaaaatgcaaacaatggaa 235  Q
    |||||||||||||| |||||||||||| |||| | |||| ||||||||||||    
T  16597745 ccatcatgttccatgccattccatccaatttttataaatccaaacaatggaa 16597796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 116 - 363
Target Start/End: Complemental strand, 27984709 - 27984461
Alignment:
Q  116 atcccatacctccctaattggaggggaagaaaaataagaggagaggatggaatggaatggtattgatcccatcatgttccatcccattccatccattttt 215  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||     
T  27984709 atcccatacctcccaaattggaggggaagaaagataagaagagaggatggaatggaatggtatcgatcctatcatgttccatcccattccatccatttta 27984610  T
Q  216 aaaaaa-tgcaaacaatggaatatcattccattccatcccattccatctcaaaccactaatccaaacagagccttagtcatattaaggattttttcaact 314  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| |||| ||||||||||    
T  27984609 aaaaaaatccaaacaatggaatgtcattccattccatcccattccatctcaaaccactaattcaaaaagagccttagtcacattcaggaatttttcaact 27984510  T
Q  315 ctgaccccactcacccttatgaatccttcattctttgtatatatctgtg 363  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27984509 ctgaccccactcatccttatgaatccttcattctttgtatatatctgtg 27984461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 27925232 - 27925332
Alignment:
Q  24 taaagaacagtgagctagaaatagatatatgtgtgatcattgaaagattgacaggacatattagtaataaactaattacaatgagtgattccatcccata 123  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  27925232 taaagaacagcgagctagaaatagatatatgtgtgatcattgaaagattgaaaggacatattagtaataaactaattacaataagtgattccatctcata 27925331  T
Q  124 c 124  Q
    |    
T  27925332 c 27925332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 363
Target Start/End: Original strand, 27889513 - 27889588
Alignment:
Q  288 ttagtcatattaaggattttttcaactctgaccccactcacccttatgaatccttcattctttgtatatatctgtg 363  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||    
T  27889513 ttagtcacattcaggattttttcaactcttaccccactcacccttttaaatccttcattctttgtatatatgtgtg 27889588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 10144033 - 10143987
Alignment:
Q  245 attccatcccattccatctcaaaccactaatccaaacagagccttag 291  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  10144033 attccatcccattccatctcaaaccaccaatccaaacatagccttag 10143987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 5092200 - 5092262
Alignment:
Q  109 tgattccatcccatacctccctaattggaggggaagaaaaataagaggagaggatggaatgga 171  Q
    |||||||||| |||||  ||| ||||||||||||||||||||||||   || |||||||||||    
T  5092200 tgattccatctcatacaccccaaattggaggggaagaaaaataagaaaggatgatggaatgga 5092262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 7e-68; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 70 - 288
Target Start/End: Complemental strand, 37804347 - 37804118
Alignment:
Q  70 attgacaggacatattagtaataaactaattacaat------gagtgattccatcccatacctccctaattggaggggaagaaaaataagaggagaggat 163  Q
    ||||| |||| ||||||||||||||||||||| |||      |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  37804347 attgaaaggatatattagtaataaactaattaaaattaaaatgagtgattccatccaatacctcccaaattggaggggaagaaaaataagaggagaggat 37804248  T
Q  164 ggaatggaatggtattgatcccatcatgttccatcccattccatccatttttaaaaaatgcaaacaatggaatatcatt-----ccattccatcccattc 258  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||  ||||| |||| |||| |||||||||     ||||||||| ||||||    
T  37804247 ggaatggaatggtatagatcccatcatgttccattccattccatccatttttttaaaatccaaataatgaaatatcatttcatcccattccattccattc 37804148  T
Q  259 catctcaaaccactaatccaaacagagcct 288  Q
    ||||||||||| ||||||||||||||||||    
T  37804147 catctcaaacctctaatccaaacagagcct 37804118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 44605310 - 44605256
Alignment:
Q  239 cattccattccatcccattccatctcaaaccactaatccaaacagagccttagtc 293  Q
    ||||||||||||| ||||  ||||||| ||||| |||||||||| ||||||||||    
T  44605310 cattccattccataccatctcatctcataccaccaatccaaacatagccttagtc 44605256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 7e-65; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 42 - 288
Target Start/End: Complemental strand, 29011714 - 29011467
Alignment:
Q  42 aaatagatatatgtgtgatcattgaaagattgacaggacatattagtaataaactaattacaat------gagtgattccatcccatacctccctaattg 135  Q
    ||||||| |||||  |||||| || || ||||| |||| ||||||||||||||||||||| |||      |||||||||||||| ||| || || |||||    
T  29011714 aaatagaaatatgcatgatcagtggaaaattgaaaggatatattagtaataaactaattaaaattaaaatgagtgattccatccaatatcttccaaattg 29011615  T
Q  136 gaggggaagaaaaataagaggagaggatggaatggaatggtattgatcccatcatgttccatcccattccatccatttttaaaaaatgcaaacaatggaa 235  Q
     ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||  ||||| ||||||||||||    
T  29011614 aaggggaagaaaaataagaggagaggatggaatggaatagtatagatcccatcatgttccatcccattccattcatttttttaaaattcaaacaatggaa 29011515  T
Q  236 tatcattccattccatcccattccatctcaaaccactaatccaaacagagcct 288  Q
    ||||||||||||     |||||||||||||||||||||||||||||| |||||    
T  29011514 tatcattccatt-----ccattccatctcaaaccactaatccaaacatagcct 29011467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 42 - 215
Target Start/End: Complemental strand, 8851815 - 8851642
Alignment:
Q  42 aaatagatatatgtgtgatcattgaaagattgacaggacatattagtaataaactaattacaatgagtgattccatcccatacctccctaattggagggg 141  Q
    ||||||| |||||  |||||| ||||| ||||| |||| |||||||  |||||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  8851815 aaatagaaatatgcatgatcagtgaaaaattgaaaggatatattagctataaactaattaaaatgagtgattccatccaatacctcccaaattggagggg 8851716  T
Q  142 aagaaaaataagaggagaggatggaatggaatggtattgatcccatcatgttccatcccattccatccattttt 215  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  8851715 aagaaaaataagaggagaggatggaatggaatggtatagatcccatcatgttcgatcccattccatccattttt 8851642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 8851105 - 8851061
Alignment:
Q  244 cattccatcccattccatctcaaaccactaatccaaacagagcct 288  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  8851105 cattccattccattccatctcaaaccactaatccaaacagagcct 8851061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 12433664 - 12433701
Alignment:
Q  245 attccatcccattccatctcaaaccactaatccaaaca 282  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  12433664 attccatcccattccatctcaaaccaccaatccaaaca 12433701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 65 - 288
Target Start/End: Original strand, 20029593 - 20029826
Alignment:
Q  65 gaaagattgacaggacatattagtaataaactaattacaatgagtgattccatcccatacctccctaattggaggggaagaaaaataagaggagaggatg 164  Q
    |||| ||||| |||| |||| ||||||||||||||||||| | |||||||||| | ||||||||  |||||||||||| |||||||||||||||| ||||    
T  20029593 gaaaaattgaaaggatatatcagtaataaactaattacaacgggtgattccattcaatacctcctaaattggaggggaggaaaaataagaggagatgatg 20029692  T
Q  165 gaatggaatggtattgatcccatcatgttccatcccattccatccatttttaaaaaatgcaaacaatggaatatcattccatt----------ccatccc 254  Q
    ||||||||| |||| ||||| || ||||||||| | ||||||| |||||||||||||| ||||||||| |||||||| |||||          |||| ||    
T  20029693 gaatggaatagtatagatcctattatgttccattctattccattcatttttaaaaaatccaaacaatgaaatatcatcccattcgatcccatcccattcc 20029792  T
Q  255 attccatctcaaaccactaatccaaacagagcct 288  Q
    |||||||| |||||||||||||||||||||||||    
T  20029793 attccatcccaaaccactaatccaaacagagcct 20029826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 2145362 - 2145411
Alignment:
Q  239 cattccattccatcccattccatctcaaaccactaatccaaacagagcct 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  2145362 cattccattccatcccattccatctcaaaccaccaatccaaacatagcct 2145411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 42108284 - 42108358
Alignment:
Q  161 gatggaatggaatggtattgatcccatcatgttccatcccattccatccatttttaaaaaatgcaaacaatggaa 235  Q
    ||||||||||||||| || ||| ||||||||| |||| ||||||||  ||||||| ||| || ||||||||||||    
T  42108284 gatggaatggaatggaatagattccatcatgtaccattccattccactcattttttaaatatccaaacaatggaa 42108358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 35231810 - 35231934
Alignment:
Q  111 attccatcccatacctccctaattggaggggaagaaaaataagagga-gaggatggaatggaatggtattgatcccatcatgttccatcccattccatcc 209  Q
    |||||||  |||||||||| |||||| ||| | |||||||| ||| | || | ||| ||||||||| || ||| |||||||||||||| |||||||||||    
T  35231810 attccattgcatacctcccaaattggggggaatgaaaaata-gagaaagatggtggtatggaatggaatggattccatcatgttccataccattccatcc 35231908  T
Q  210 atttttaaaaaatgcaaacaatggaa 235  Q
    | |||| | ||||  |||||||||||    
T  35231909 aatttttagaaatctaaacaatggaa 35231934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 29466265 - 29466313
Alignment:
Q  240 attccattccatcccattccatctcaaaccactaatccaaacagagcct 288  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  29466265 attccattccatcccattccatctcaaaccaccaatccaaacatagcct 29466313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 23473883 - 23473768
Alignment:
Q  121 atacctccctaattggaggggaagaaaaataagaggagaggatggaatggaatggtattgatcccatcatgttccatcccattccatccatttttaaaaa 220  Q
    ||||||| | |||||||||| | |||||| ||||| ||| ||||| |||| |||| || ||| |||||||||||||| ||||||||| || |||| | |     
T  23473883 atacctcacaaattggagggaatgaaaaacaagagtagatgatggtatgggatggaatggattccatcatgttccattccattccattcaatttttacac 23473784  T
Q  221 atgcaaacaatggaat 236  Q
    || |||||||||||||    
T  23473783 atccaaacaatggaat 23473768  T

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Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 35306754 - 35306878
Alignment:
Q  111 attccatcccatacctccctaattggaggggaagaaaaataagagga-gaggatggaatggaatggtattgatcccatcatgttccatcccattccatcc 209  Q
    |||||||  |||||||||| |||||| ||| | |||||||| ||| | || | ||| ||||||||| || ||| |||||||||||||| |||||||||||    
T  35306754 attccattgcatacctcccaaattggggggaatgaaaaata-gagaaagatggtggtatggaatggaatggattccatcatgttccataccattccatcc 35306852  T
Q  210 atttttaaaaaatgcaaacaatggaa 235  Q
    | |||| | ||||  |||||||||||    
T  35306853 aatttttagaaatctaaacaatggaa 35306878  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 28301570 - 28301613
Alignment:
Q  245 attccatcccattccatctcaaaccactaatccaaacagagcct 288  Q
    ||||||||||||||||||||||||||| |||||||||| |||||    
T  28301570 attccatcccattccatctcaaaccaccaatccaaacatagcct 28301613  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 29428987 - 29428919
Alignment:
Q  167 atggaatggtattgatcccatcatgttccatcccattccatccatttttaaaaaatgcaaacaatggaa 235  Q
    |||| |||| || ||| |||||||||| ||| ||||||||| ||||||| | |||| ||||||||||||    
T  29428987 atgggatggaatggattccatcatgtttcattccattccattcattttttacaaatccaaacaatggaa 29428919  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 47920857 - 47920797
Alignment:
Q  189 atgttccatcccattccatccatttttaaaaaatgcaaacaatggaatatcattccattcc 249  Q
    ||||| |||||||||||||||||| ||  ||||| ||||||||||||| | ||| ||||||    
T  47920857 atgtttcatcccattccatccattattttaaaattcaaacaatggaatgttatttcattcc 47920797  T

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