View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18238_low_23 (Length: 310)
Name: NF18238_low_23
Description: NF18238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18238_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 9 - 294
Target Start/End: Original strand, 9063637 - 9063922
Alignment:
| Q |
9 |
agatgaaagtcaaagttgctacacgttattcacacagcgtaccaaaattggtatgtccagaagattcaaatgggatattaataagcacgaaatatctcaa |
108 |
Q |
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|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9063637 |
agatcaaagtcaaggttgctacacgttattcacacagcgtaccaaaattggtatgtccagaagattcaaatgggatattaataagcacgaaatatctcaa |
9063736 |
T |
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| Q |
109 |
caaggtagtaaaaattgatgtggaagaaaaaacaataacattggagagtggtgtgacattgaagcaaattattaatgaagcctcaaaaaatggtttggct |
208 |
Q |
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| T |
9063737 |
caaggtagtaaaaattgatgtggaagaaaaaacaataacattggagagtggtgtgacattgaagcaaattattaatgaagcctcaaaaaatggtttggct |
9063836 |
T |
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| Q |
209 |
ttaccatatacaccatattggtatggtttaacaataggtggaatgatcggaactggtgctcatggaagcacattgtcggggaaagg |
294 |
Q |
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| T |
9063837 |
ttaccatatacaccatattggtatggtttaacaataggtggaatgatcggaactggtgctcatggaagcacattgtcggggaaagg |
9063922 |
T |
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