View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18239_low_9 (Length: 404)

Name: NF18239_low_9
Description: NF18239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18239_low_9
NF18239_low_9
[»] chr6 (29 HSPs)
chr6 (8-386)||(24588310-24588684)
chr6 (20-126)||(16625016-16625122)
chr6 (35-125)||(6112148-6112238)
chr6 (20-123)||(15704302-15704405)
chr6 (35-123)||(19772403-19772491)
chr6 (35-123)||(31477095-31477183)
chr6 (36-118)||(22949848-22949930)
chr6 (36-118)||(22953804-22953886)
chr6 (36-118)||(23872292-23872374)
chr6 (36-118)||(23876248-23876330)
chr6 (36-123)||(16760998-16761086)
chr6 (20-123)||(27324452-27324553)
chr6 (20-123)||(2077412-2077515)
chr6 (36-123)||(22806967-22807054)
chr6 (20-126)||(27073585-27073691)
chr6 (20-126)||(26981195-26981301)
chr6 (39-124)||(14073754-14073839)
chr6 (52-123)||(15991086-15991157)
chr6 (48-126)||(2862860-2862938)
chr6 (19-124)||(18387531-18387636)
chr6 (48-122)||(15640938-15641012)
chr6 (124-173)||(28963737-28963786)
chr6 (70-121)||(2759769-2759820)
chr6 (125-170)||(15509448-15509493)
chr6 (79-123)||(14322801-14322845)
chr6 (48-99)||(2882190-2882241)
chr6 (19-58)||(17963991-17964030)
chr6 (121-170)||(29157067-29157116)
chr6 (52-108)||(15645330-15645386)
[»] chr5 (36 HSPs)
chr5 (19-125)||(557295-557401)
chr5 (19-125)||(36936900-36937006)
chr5 (20-125)||(41997264-41997369)
chr5 (20-125)||(42002033-42002138)
chr5 (19-125)||(562067-562173)
chr5 (19-125)||(36941654-36941760)
chr5 (35-125)||(13300879-13300969)
chr5 (29-126)||(36949394-36949491)
chr5 (19-125)||(31732136-31732242)
chr5 (19-121)||(32460937-32461039)
chr5 (20-123)||(10754050-10754153)
chr5 (29-123)||(21323367-21323461)
chr5 (35-125)||(23976976-23977066)
chr5 (19-126)||(21826822-21826929)
chr5 (43-122)||(3666536-3666615)
chr5 (19-125)||(12044519-12044630)
chr5 (19-126)||(26869702-26869809)
chr5 (19-109)||(8770842-8770932)
chr5 (60-121)||(15395233-15395294)
chr5 (125-170)||(3667038-3667083)
chr5 (29-126)||(24435571-24435668)
chr5 (121-171)||(12044013-12044064)
chr5 (121-170)||(557857-557907)
chr5 (121-170)||(562627-562677)
chr5 (60-126)||(41099170-41099236)
chr5 (124-170)||(42002598-42002645)
chr5 (121-170)||(36936393-36936443)
chr5 (121-170)||(36941147-36941197)
chr5 (121-170)||(41997804-41997854)
chr5 (19-58)||(26667902-26667941)
chr5 (19-58)||(26939499-26939538)
chr5 (19-58)||(29167405-29167444)
chr5 (19-58)||(36424262-36424301)
chr5 (121-170)||(32460427-32460477)
chr5 (55-95)||(1429584-1429624)
chr5 (8-56)||(6154867-6154915)
[»] chr3 (52 HSPs)
chr3 (19-125)||(3034242-3034348)
chr3 (19-125)||(3693217-3693323)
chr3 (19-125)||(8888529-8888635)
chr3 (19-125)||(3673185-3673291)
chr3 (19-125)||(8070278-8070384)
chr3 (19-125)||(8883769-8883875)
chr3 (19-125)||(10585579-10585685)
chr3 (20-123)||(9706982-9707085)
chr3 (20-123)||(16749311-16749414)
chr3 (20-123)||(19776485-19776588)
chr3 (19-126)||(6595781-6595888)
chr3 (20-126)||(18350163-18350269)
chr3 (35-123)||(22758571-22758659)
chr3 (30-126)||(51922944-51923040)
chr3 (19-126)||(8223534-8223641)
chr3 (19-126)||(14425231-14425338)
chr3 (36-123)||(37438951-37439038)
chr3 (36-118)||(4106722-4106804)
chr3 (36-118)||(4110574-4110656)
chr3 (36-118)||(15965671-15965753)
chr3 (36-118)||(15969595-15969677)
chr3 (36-118)||(15973519-15973601)
chr3 (19-121)||(45903938-45904040)
chr3 (19-126)||(29827-29934)
chr3 (19-126)||(8197051-8197158)
chr3 (20-123)||(8488782-8488884)
chr3 (52-126)||(35456328-35456401)
chr3 (20-92)||(18699200-18699272)
chr3 (48-126)||(47540907-47540985)
chr3 (48-126)||(11997395-11997472)
chr3 (60-126)||(12899131-12899197)
chr3 (8-119)||(53358690-53358805)
chr3 (48-108)||(429057-429117)
chr3 (121-170)||(8070838-8070888)
chr3 (20-75)||(14671993-14672048)
chr3 (79-126)||(16023191-16023238)
chr3 (121-170)||(3034805-3034855)
chr3 (121-170)||(3673727-3673777)
chr3 (121-170)||(8884332-8884382)
chr3 (121-170)||(8889078-8889128)
chr3 (48-126)||(16043129-16043207)
chr3 (70-123)||(18011990-18012043)
chr3 (81-126)||(49020114-49020159)
chr3 (68-107)||(3166194-3166233)
chr3 (124-170)||(3693784-3693831)
chr3 (19-58)||(18467836-18467875)
chr3 (19-58)||(32473456-32473495)
chr3 (19-58)||(39775160-39775199)
chr3 (20-58)||(14438132-14438170)
chr3 (48-126)||(16048621-16048699)
chr3 (70-123)||(19340123-19340176)
chr3 (72-121)||(47540522-47540571)
[»] scaffold0182 (2 HSPs)
scaffold0182 (8-121)||(9273-9386)
scaffold0182 (121-170)||(8764-8814)
[»] chr8 (29 HSPs)
chr8 (19-125)||(4237730-4237836)
chr8 (19-125)||(4242469-4242575)
chr8 (19-125)||(31449254-31449360)
chr8 (19-125)||(43302073-43302179)
chr8 (19-125)||(8330752-8330858)
chr8 (19-125)||(37772306-37772412)
chr8 (20-126)||(4582684-4582790)
chr8 (19-125)||(25367375-25367481)
chr8 (20-123)||(21384344-21384447)
chr8 (20-123)||(21387764-21387867)
chr8 (36-118)||(18861966-18862048)
chr8 (19-126)||(22104274-22104381)
chr8 (20-126)||(19393119-19393225)
chr8 (36-118)||(21827335-21827417)
chr8 (19-121)||(34818099-34818201)
chr8 (20-124)||(16066607-16066711)
chr8 (35-123)||(21411638-21411726)
chr8 (35-123)||(21806130-21806218)
chr8 (20-123)||(23915092-23915195)
chr8 (48-126)||(14036083-14036161)
chr8 (29-89)||(25733590-25733650)
chr8 (121-170)||(31448747-31448797)
chr8 (121-172)||(4237222-4237274)
chr8 (121-170)||(4241963-4242013)
chr8 (80-126)||(17153198-17153244)
chr8 (80-126)||(17157440-17157486)
chr8 (53-127)||(42972749-42972823)
chr8 (128-171)||(14036609-14036654)
chr8 (48-113)||(15197266-15197331)
[»] chr2 (28 HSPs)
chr2 (19-125)||(10160109-10160215)
chr2 (30-126)||(25375499-25375595)
chr2 (19-123)||(28855730-28855833)
chr2 (23-125)||(30658780-30658882)
chr2 (36-123)||(1284130-1284217)
chr2 (30-126)||(34070029-34070125)
chr2 (19-126)||(22845001-22845108)
chr2 (20-123)||(23068144-23068247)
chr2 (36-118)||(30344312-30344394)
chr2 (8-126)||(26897215-26897333)
chr2 (19-126)||(24292850-24292957)
chr2 (20-123)||(42248827-42248930)
chr2 (20-126)||(6856797-6856903)
chr2 (20-121)||(377683-377784)
chr2 (21-109)||(7559756-7559844)
chr2 (19-126)||(24286282-24286389)
chr2 (20-126)||(30635393-30635502)
chr2 (29-123)||(9785759-9785851)
chr2 (35-125)||(6297282-6297371)
chr2 (68-126)||(17327708-17327766)
chr2 (52-126)||(17452974-17453053)
chr2 (124-170)||(35602757-35602804)
chr2 (121-170)||(10159601-10159651)
chr2 (19-58)||(18345035-18345074)
chr2 (121-175)||(30659318-30659373)
chr2 (32-94)||(30637112-30637177)
chr2 (48-126)||(30641499-30641577)
chr2 (19-56)||(17968397-17968434)
[»] chr1 (34 HSPs)
chr1 (29-125)||(40232777-40232873)
chr1 (19-125)||(3094688-3094794)
chr1 (19-126)||(17213832-17213939)
chr1 (35-125)||(41097347-41097437)
chr1 (19-126)||(13893915-13894022)
chr1 (20-123)||(39243414-39243517)
chr1 (20-123)||(39246969-39247072)
chr1 (35-123)||(41387366-41387454)
chr1 (19-126)||(1067080-1067187)
chr1 (19-126)||(14804103-14804210)
chr1 (35-126)||(14819587-14819678)
chr1 (19-126)||(22428584-22428690)
chr1 (36-118)||(1924450-1924532)
chr1 (36-118)||(20923464-20923546)
chr1 (29-126)||(21498260-21498357)
chr1 (19-126)||(52100610-52100716)
chr1 (19-126)||(26198957-26199064)
chr1 (35-99)||(16836701-16836765)
chr1 (18-125)||(19725295-19725400)
chr1 (20-107)||(33055636-33055723)
chr1 (20-126)||(2367643-2367749)
chr1 (20-126)||(2384634-2384740)
chr1 (53-126)||(23285227-23285300)
chr1 (74-122)||(8267244-8267292)
chr1 (53-117)||(23254584-23254648)
chr1 (20-94)||(26319593-26319667)
chr1 (29-122)||(19726975-19727067)
chr1 (19-58)||(26927153-26927192)
chr1 (20-58)||(10135950-10135988)
chr1 (121-167)||(27307360-27307406)
chr1 (60-122)||(27308280-27308342)
chr1 (121-170)||(8273059-8273108)
chr1 (124-170)||(14204447-14204495)
chr1 (19-59)||(51040942-51040982)
[»] chr7 (45 HSPs)
chr7 (19-125)||(8076649-8076755)
chr7 (8-125)||(9650349-9650466)
chr7 (19-125)||(27256836-27256942)
chr7 (36-123)||(18426543-18426630)
chr7 (19-125)||(40864752-40864858)
chr7 (35-123)||(20488563-20488651)
chr7 (35-126)||(8954655-8954746)
chr7 (20-123)||(16459772-16459875)
chr7 (36-123)||(45169322-45169409)
chr7 (35-121)||(20485202-20485288)
chr7 (20-123)||(14928027-14928130)
chr7 (20-123)||(15351493-15351596)
chr7 (52-126)||(9008789-9008863)
chr7 (21-126)||(838820-838925)
chr7 (21-126)||(1204000-1204105)
chr7 (19-84)||(47102138-47102203)
chr7 (19-107)||(29727211-29727299)
chr7 (20-123)||(14259606-14259709)
chr7 (20-124)||(36477577-36477674)
chr7 (29-126)||(845996-846093)
chr7 (29-126)||(853373-853470)
chr7 (29-126)||(1211377-1211474)
chr7 (19-122)||(19096853-19096957)
chr7 (20-123)||(32302439-32302542)
chr7 (52-126)||(10532221-10532295)
chr7 (35-125)||(19640914-19641004)
chr7 (52-124)||(10499494-10499566)
chr7 (52-124)||(10504523-10504595)
chr7 (38-122)||(11017473-11017557)
chr7 (52-126)||(13343817-13343891)
chr7 (121-170)||(9649844-9649893)
chr7 (35-123)||(16580844-16580932)
chr7 (54-117)||(2629290-2629353)
chr7 (121-170)||(47102692-47102742)
chr7 (48-123)||(1043847-1043922)
chr7 (48-122)||(11297381-11297455)
chr7 (55-126)||(15566012-15566081)
chr7 (19-58)||(26341831-26341870)
chr7 (124-170)||(43457097-43457143)
chr7 (53-126)||(10488686-10488759)
chr7 (125-170)||(10499011-10499056)
chr7 (125-170)||(10504040-10504085)
chr7 (125-170)||(13343311-13343356)
chr7 (13-58)||(44509829-44509874)
chr7 (121-161)||(23866884-23866924)
[»] chr4 (31 HSPs)
chr4 (8-125)||(13521374-13521491)
chr4 (19-125)||(3997451-3997557)
chr4 (19-125)||(7902500-7902606)
chr4 (20-126)||(15225765-15225871)
chr4 (35-119)||(47575277-47575361)
chr4 (35-125)||(31297884-31297974)
chr4 (19-125)||(34561023-34561129)
chr4 (36-123)||(12488414-12488501)
chr4 (19-126)||(14868456-14868563)
chr4 (19-126)||(14877371-14877478)
chr4 (20-123)||(10713540-10713643)
chr4 (20-123)||(10927310-10927413)
chr4 (35-126)||(14899004-14899095)
chr4 (20-123)||(15011207-15011310)
chr4 (36-118)||(14953451-14953533)
chr4 (36-118)||(25690610-25690692)
chr4 (19-126)||(8660791-8660898)
chr4 (19-126)||(9185072-9185179)
chr4 (19-126)||(9190937-9191044)
chr4 (19-93)||(41817381-41817455)
chr4 (31-126)||(26034799-26034894)
chr4 (31-126)||(39320173-39320267)
chr4 (121-170)||(13520869-13520918)
chr4 (54-122)||(52742616-52742684)
chr4 (20-75)||(18023221-18023276)
chr4 (70-116)||(32545533-32545579)
chr4 (53-126)||(26188056-26188129)
chr4 (48-121)||(55073774-55073847)
chr4 (79-123)||(43477408-43477452)
chr4 (20-58)||(5270856-5270894)
chr4 (124-170)||(39320722-39320768)
[»] scaffold0205 (1 HSPs)
scaffold0205 (20-123)||(30867-30970)
[»] scaffold0034 (1 HSPs)
scaffold0034 (20-123)||(121166-121269)
[»] scaffold0060 (2 HSPs)
scaffold0060 (19-125)||(47362-47468)
scaffold0060 (19-125)||(52306-52412)
[»] scaffold0019 (1 HSPs)
scaffold0019 (20-126)||(30284-30390)
[»] scaffold0009 (1 HSPs)
scaffold0009 (29-126)||(71740-71838)
[»] scaffold0572 (1 HSPs)
scaffold0572 (20-123)||(10367-10470)
[»] scaffold0144 (1 HSPs)
scaffold0144 (29-123)||(7486-7580)
[»] scaffold0061 (1 HSPs)
scaffold0061 (19-125)||(49373-49479)
[»] scaffold0017 (1 HSPs)
scaffold0017 (19-125)||(149155-149261)
[»] scaffold0229 (1 HSPs)
scaffold0229 (36-123)||(10817-10904)
[»] scaffold0157 (1 HSPs)
scaffold0157 (36-123)||(31976-32063)
[»] scaffold0141 (1 HSPs)
scaffold0141 (36-123)||(13403-13490)
[»] scaffold0132 (1 HSPs)
scaffold0132 (19-126)||(24684-24791)
[»] scaffold0124 (1 HSPs)
scaffold0124 (36-123)||(21377-21464)
[»] scaffold0011 (1 HSPs)
scaffold0011 (20-123)||(127003-127106)
[»] scaffold0041 (1 HSPs)
scaffold0041 (19-125)||(35093-35199)
[»] scaffold1910 (1 HSPs)
scaffold1910 (20-124)||(466-570)
[»] scaffold0452 (1 HSPs)
scaffold0452 (35-123)||(12359-12447)
[»] scaffold0431 (1 HSPs)
scaffold0431 (35-123)||(14868-14956)
[»] scaffold0020 (1 HSPs)
scaffold0020 (29-125)||(629-725)
[»] scaffold0044 (2 HSPs)
scaffold0044 (19-126)||(81157-81264)
scaffold0044 (35-126)||(64775-64866)
[»] scaffold0018 (1 HSPs)
scaffold0018 (20-123)||(21907-22010)
[»] scaffold0015 (2 HSPs)
scaffold0015 (19-126)||(193655-193762)
scaffold0015 (20-123)||(187972-188075)
[»] scaffold0415 (1 HSPs)
scaffold0415 (36-118)||(1104-1186)
[»] scaffold0070 (2 HSPs)
scaffold0070 (19-125)||(59025-59131)
scaffold0070 (76-125)||(63284-63333)
[»] scaffold0327 (1 HSPs)
scaffold0327 (29-126)||(19610-19707)
[»] scaffold0357 (1 HSPs)
scaffold0357 (19-126)||(3735-3842)
[»] scaffold0031 (1 HSPs)
scaffold0031 (36-123)||(35402-35489)
[»] scaffold0575 (1 HSPs)
scaffold0575 (20-122)||(5273-5375)
[»] scaffold0628 (2 HSPs)
scaffold0628 (35-123)||(7003-7091)
scaffold0628 (124-170)||(5831-5877)
[»] scaffold0292 (1 HSPs)
scaffold0292 (20-123)||(7767-7870)
[»] scaffold0008 (2 HSPs)
scaffold0008 (52-126)||(256444-256518)
scaffold0008 (124-161)||(257801-257838)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-124)||(199791-199894)
[»] scaffold0932 (1 HSPs)
scaffold0932 (48-126)||(1027-1105)
[»] scaffold0478 (1 HSPs)
scaffold0478 (48-126)||(8215-8293)
[»] scaffold0096 (1 HSPs)
scaffold0096 (31-83)||(22320-22372)
[»] scaffold0155 (1 HSPs)
scaffold0155 (19-82)||(22274-22337)
[»] scaffold0720 (1 HSPs)
scaffold0720 (48-126)||(5939-6017)
[»] scaffold0045 (1 HSPs)
scaffold0045 (125-170)||(84074-84120)
[»] scaffold0232 (1 HSPs)
scaffold0232 (53-114)||(22583-22644)


Alignment Details
Target: chr6 (Bit Score: 292; Significance: 1e-164; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 8 - 386
Target Start/End: Complemental strand, 24588684 - 24588310
Alignment:
Q  8 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 107  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24588684 ggagaagagagggaaaaacataggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 24588585  T
Q  108 aagtgagaaactttgggaatttgtgtttagtctttttacttaatttccacacatgttccaacacttcccaagtgatctattagtttgaggttcatgcctc 207  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24588584 aagtgagaacctttgggaatttgtgtttagtctttttactcaatttccacacatgttccaacacttcccaagtgatctattggtttgaggttcatgcctc 24588485  T
Q  208 aaccttattgttcttggctcgagctggtatatgcatgacgaacttaagaatataaagatcaannnnnnnnnnnnnnnnngagtagtaaggaagattaata 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||                  ||||||||||||||||||||    
T  24588484 aaccttattgttcttggctcgagctggtatatgcatgacgaacttaagaataaaaagatcaactttttttttccca----agtagtaaggaagattaata 24588389  T
Q  308 cctcagacctgcttgttggacctaaatagacggcaattaagagttttaatttagttgatttctaaattcaggttcaaat 386  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24588388 cctcagacctgcttgttggatctaaatagacggcaattaagagttttaatttagttgatttctaaattcaggttcaaat 24588310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 16625016 - 16625122
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  16625016 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 16625115  T
Q  120 ttgggaa 126  Q
    |||||||    
T  16625116 ttgggaa 16625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 6112238 - 6112148
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 125  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||  |||||||||||||||||||||||||    
T  6112238 catcaactgtgaatttcggtgtgttgaatgcactgtgtgagctctctatttatatagaaagttcccaactaataagtgagaaactttggga 6112148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 15704405 - 15704302
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| ||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  15704405 gaaaaacacaggaagcatcaactgtgaatctcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 15704306  T
Q  120 ttgg 123  Q
    ||||    
T  15704305 ttgg 15704302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 19772491 - 19772403
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  19772491 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 19772403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 31477183 - 31477095
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  31477183 catcaactgtgaattttggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 31477095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 22949848 - 22949930
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  22949848 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 22949930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 22953804 - 22953886
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  22953804 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 22953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 23872292 - 23872374
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  23872292 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 23872374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 23876248 - 23876330
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  23876248 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 23876330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 16760998 - 16761086
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttata-gagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| |||| | |||||||||||||||||||||||    
T  16760998 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttataggagataatttacaactaataagtgagaaactttgg 16761086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 27324553 - 27324452
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  27324553 gaaaaacacaggaagcatcaactgtgaatttcggtgtgtagaatgca--gtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 27324456  T
Q  120 ttgg 123  Q
    ||||    
T  27324455 ttgg 27324452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 2077412 - 2077515
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || | || | |||||| ||||||||||||    
T  2077412 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaaaaagtgagaaact 2077511  T
Q  120 ttgg 123  Q
    ||||    
T  2077512 ttgg 2077515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 22806967 - 22807054
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||| | || | ||||||||| |||||||||||||    
T  22806967 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttccctatttatagagatagtttacaactaataaatgagaaactttgg 22807054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 27073585 - 27073691
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||||||||||||||| ||||||| ||   |||||||  |||||||||||||||||||| ||||| |||| |||||||| ||||||||||    
T  27073585 gaaaagcacaggaaacatcaactgtgtatttcggggtccagaatgcatcgtgtgagctctctatttataaagaaatttcacaactaataggtgagaaact 27073684  T
Q  120 ttgggaa 126  Q
    |||||||    
T  27073685 ttgggaa 27073691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 26981195 - 26981301
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| ||||||||||| ||||||| ||   |||||||  |||||||||||||||||||| ||||| |||| |||||||| ||||||||||    
T  26981195 gaaaagcacaggaagcatcaactgtgtatttcggggtccagaatgcatcgtgtgagctctctatttataaagaaatttcacaactaataggtgagaaact 26981294  T
Q  120 ttgggaa 126  Q
    |||||||    
T  26981295 ttgggaa 26981301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 14073754 - 14073839
Alignment:
Q  39 aactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggg 124  Q
    ||||||||||||||| ||  |||||||| ||| ||||||||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  14073754 aactgtgaatttcggggtccggaatgcattgtatgagctctctatttatagagaaatttcacaactaatagatgagaaactttggg 14073839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 15991157 - 15991086
Alignment:
Q  52 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||| |  | | ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  15991157 ggtgtgtggaatgcactatacgtgttctctatttgtagagaaaattcacaactaataagtgagaaactttgg 15991086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 2862938 - 2862860
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||| || || || ||| | |||||||||||    
T  2862938 tttcggtgtatggaatgaactatgtgagctctctatttatagagaaaattcacaaatagtatgtgtgcaactttgggaa 2862860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 18387531 - 18387636
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||||||| ||| || ||    |||||| ||||||||||||||||||||| ||||| |||| || ||||| |||||||||    
T  18387531 ggaaaagcacaggaatcatcaactgtgatttttggggtccaaaatgcattgtgtgagctctctatttatacagaaacttcacaattaataggtgagaaac 18387630  T
Q  119 tttggg 124  Q
    ||||||    
T  18387631 tttggg 18387636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 15640938 - 15641012
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 122  Q
    ||||||||||| ||||| | | ||||||||| ||||||||||||| |||||| |||||||| |||| ||||||||    
T  15640938 tttcggtgtgttgaatgaattatgtgagctcactatttatagagagaattcacaactaatacgtgataaactttg 15641012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 28963786 - 28963737
Alignment:
Q  124 gaatttgtgtttagtctttttacttaatttccacacatgttccaacactt 173  Q
    |||||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  28963786 gaatttgtgtttggtcttttaactcaatttccacacatgttccaacactt 28963737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 2759820 - 2759769
Alignment:
Q  70 tgtgagctctctatttatagagaaaattcaaaactaataagtgagaaacttt 121  Q
    |||||||||||| |||| |||||||||||| ||||||||||| |||||||||    
T  2759820 tgtgagctctctgtttacagagaaaattcacaactaataagtaagaaacttt 2759769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 15509448 - 15509493
Alignment:
Q  125 aatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||    
T  15509448 aatttgtgtttagtcttttaacttaattttcacatatgttccaaca 15509493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 14322845 - 14322801
Alignment:
Q  79 tctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||| |||| | |||||||||||||||||||||||    
T  14322845 tctatttatagagataatttacaactaataagtgagaaactttgg 14322801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 2882241 - 2882190
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattca 99  Q
    ||||||||| ||||||| ||| ||||||||||  ||||||||||||||||||    
T  2882241 tttcggtgtatggaatgaactatgtgagctctgaatttatagagaaaattca 2882190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 17964030 - 17963991
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  17964030 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 17963991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 29157116 - 29157067
Alignment:
Q  121 tgggaatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    |||||||||||||| |||||||| |||||||||| |  ||||||||||||    
T  29157116 tgggaatttgtgttcagtcttttaacttaatttctatgcatgttccaaca 29157067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 15645330 - 15645386
Alignment:
Q  52 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaata 108  Q
    ||||||| ||||| | | ||||||||||||||||||| |||||||||  ||||||||    
T  15645330 ggtgtgtagaatggattatgtgagctctctatttatatagaaaattcgcaactaata 15645386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 6e-44; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 557295 - 557401
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  557295 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 557394  T
Q  119 tttggga 125  Q
    |||||||    
T  557395 tttggga 557401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 36937006 - 36936900
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  36937006 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 36936907  T
Q  119 tttggga 125  Q
    |||||||    
T  36936906 tttggga 36936900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 41997264 - 41997369
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  41997264 gaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaact 41997363  T
Q  120 ttggga 125  Q
    ||||||    
T  41997364 ttggga 41997369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 42002033 - 42002138
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  42002033 gaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaact 42002132  T
Q  120 ttggga 125  Q
    ||||||    
T  42002133 ttggga 42002138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 562067 - 562173
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  562067 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtaagaaac 562166  T
Q  119 tttggga 125  Q
    |||||||    
T  562167 tttggga 562173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 36941760 - 36941654
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  36941760 ggaaaaacacaggaagcatcaactgtgaatttcggtgtatggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 36941661  T
Q  119 tttggga 125  Q
    |||||||    
T  36941660 tttggga 36941654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 13300969 - 13300879
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 125  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  13300969 catcaactgtgaatttcggtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 13300879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 36949394 - 36949491
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  36949394 aggaaacatcaattgtgattttcggtgtgttgaatgcactgtgtgagctctctatttatagaaaaaattcataactaataagtgagaaactttgggaa 36949491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 31732136 - 31732242
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  31732136 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 31732235  T
Q  119 tttggga 125  Q
    |||||||    
T  31732236 tttggga 31732242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 32461039 - 32460937
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  32461039 ggaaaaacacaggaagcatcaactgtgaatttcggtgtatggaatgcattgtgtgagctctctatttatagataaagttcacaactaataagtgagaaac 32460940  T
Q  119 ttt 121  Q
    |||    
T  32460939 ttt 32460937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 10754050 - 10754153
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  10754050 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 10754149  T
Q  120 ttgg 123  Q
    ||||    
T  10754150 ttgg 10754153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 21323461 - 21323367
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||| |||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  21323461 aggaagcatcaactgtgaatttcggtgtatggaaaacactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgg 21323367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 23977066 - 23976976
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 125  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  23977066 catcaactgtgaatttcagtgtatggaatgcactgtgtgagctctctatttatagagaaagttcactactaataagtgagaaactttggga 23976976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 21826822 - 21826929
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||| | |||||| |||||||||    
T  21826822 ggaaaagcacaggaatcatcaactgtgaatttcggggtgtagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaac 21826921  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  21826922 tttgggaa 21826929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 3666536 - 3666615
Alignment:
Q  43 gtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 122  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3666536 gtgaatttcggtgtgtagaatgccctgcgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttg 3666615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 12044630 - 12044519
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactg-----tgtgagctctctatttatagagaaaattcaaaactaataagtga 113  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||||||||||     |||||||||||| ||| ||||||||||||| |||||||||||||    
T  12044630 ggaaaaacacaggaagcatcaactttgaatttcggtgtgtggaatgcactgctgtgtgtgagctctctttttctagagaaaattcacaactaataagtga 12044531  T
Q  114 gaaactttggga 125  Q
     |||||||||||    
T  12044530 aaaactttggga 12044519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 26869809 - 26869702
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||| |||| | |||||| |||||||||    
T  26869809 ggaaaagcacaggaagcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaac 26869710  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  26869709 tttgggaa 26869702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 8770842 - 8770932
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataa 109  Q
    ||||||||| ||||| ||||||||||||||||| ||||   ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  8770842 ggaaaaacacaggaagcatcaactgtgaatttcagtgtccagaatgcattgtgtgagctctctatttatagagaaaattcacaactaataa 8770932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 15395294 - 15395233
Alignment:
Q  60 gaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaacttt 121  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  15395294 gaatgcaccgagtgagctctctatttatagagaaaattcacaactaataagtgagtaacttt 15395233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 3667038 - 3667083
Alignment:
Q  125 aatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  3667038 aatttgtgtttagtctttttactcaatttccacacatgttccaaca 3667083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 24435668 - 24435571
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||| |||| |||||| | |||||||||  |||||||||||| |||||||||||||||||||||| |||   |||||||||||| | ||||| ||||    
T  24435668 aggaatcatcgactgtggaattcggtgtgaagaatgcactgtgagagctctctatttatagagaaagttctctactaataagtgaaagactttaggaa 24435571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 12044064 - 12044013
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaacac 171  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  12044064 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaacac 12044013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 557857 - 557907
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  557857 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 562627 - 562677
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  562627 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 562677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 41099170 - 41099236
Alignment:
Q  60 gaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||| ||||||||| ||||||||||||||||| |||  |||||||| |||| ||||||||||||    
T  41099170 gaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgataaactttgggaa 41099236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 42002598 - 42002645
Alignment:
Q  124 gaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  42002598 gaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 42002645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 36936443 - 36936393
Alignment:
Q  121 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  36936443 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 36936393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 36941197 - 36941147
Alignment:
Q  121 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  36941197 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 36941147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 41997804 - 41997854
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  41997804 tgggaatttgtgtttagtctttttaactcaattttcacacatgttccaaca 41997854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 26667902 - 26667941
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  26667902 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 26667941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 26939499 - 26939538
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  26939499 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 26939538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 29167444 - 29167405
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  29167444 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 29167405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 36424262 - 36424301
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  36424262 ggaaaaacacagaaaacatcaactgtgaatttcggtgtgt 36424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 32460477 - 32460427
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||| ||||||||||| ||| |||||| |||||||||||||||    
T  32460477 tgggaatttgtgattagtctttttaactcaatttcaacacatgttccaaca 32460427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 1429624 - 1429584
Alignment:
Q  55 gtgtggaatgcactgtgtgagctctctatttatagagaaaa 95  Q
    |||| ||||||||| ||||||||||||||||||||| ||||    
T  1429624 gtgtagaatgcactatgtgagctctctatttatagaaaaaa 1429584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 6154915 - 6154867
Alignment:
Q  8 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgt 56  Q
    |||| ||||| | ||||||| ||||| ||||||||||||||||||||||    
T  6154915 ggagaagagaagaaaaaacacaggaagcatcaactgtgaatttcggtgt 6154867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 6e-44; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 3034242 - 3034348
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3034242 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 3034341  T
Q  119 tttggga 125  Q
    |||||||    
T  3034342 tttggga 3034348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 3693217 - 3693323
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3693217 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 3693316  T
Q  119 tttggga 125  Q
    |||||||    
T  3693317 tttggga 3693323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 8888529 - 8888635
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8888529 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 8888628  T
Q  119 tttggga 125  Q
    |||||||    
T  8888629 tttggga 8888635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 3673185 - 3673291
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3673185 ggaaaaacacaggaagcatcaactgtgaatttcagtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 3673284  T
Q  119 tttggga 125  Q
    |||||||    
T  3673285 tttggga 3673291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 8070278 - 8070384
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8070278 ggaaaaatacaggaagcatcaactgtgaatttcggtgtctggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 8070377  T
Q  119 tttggga 125  Q
    |||||||    
T  8070378 tttggga 8070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 8883769 - 8883875
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||||||||||    
T  8883769 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtaagctctttatttatagagaaagttcacaactaataagtgagaaac 8883868  T
Q  119 tttggga 125  Q
    |||||||    
T  8883869 tttggga 8883875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 10585685 - 10585579
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  10585685 ggaaaaacacaggaagcatcaactgtgaattttggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 10585586  T
Q  119 tttggga 125  Q
    |||||||    
T  10585585 tttggga 10585579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 9707085 - 9706982
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  9707085 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 9706986  T
Q  120 ttgg 123  Q
    ||||    
T  9706985 ttgg 9706982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 16749414 - 16749311
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  16749414 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 16749315  T
Q  120 ttgg 123  Q
    ||||    
T  16749314 ttgg 16749311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 19776485 - 19776588
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  19776485 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 19776584  T
Q  120 ttgg 123  Q
    ||||    
T  19776585 ttgg 19776588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 6595888 - 6595781
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||| ||||||| | |||||  |||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  6595888 ggaaaaacacaggaagcatcaactatgaattttgatgtgtaaaatgcactctgtgagctctctatttatagagaaaattcacaactaataagtgaaaaac 6595789  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  6595788 tttgggaa 6595781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 18350269 - 18350163
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| ||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||  |||||||| ||||||||||    
T  18350269 gaaaaacacaggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcgcaactaataggtgagaaact 18350170  T
Q  120 ttgggaa 126  Q
    |||||||    
T  18350169 ttgggaa 18350163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 22758659 - 22758571
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | ||||||||||||||||| |||||    
T  22758659 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaattttgg 22758571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 51922944 - 51923040
Alignment:
Q  30 ggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||| ||||||||||||||||||||||   ||||||| ||||||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  51922944 ggaatcatcaactgtgaatttcggtgtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaa 51923040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 8223534 - 8223641
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  8223534 ggaaaagcacaggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaac 8223633  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  8223634 tttgggaa 8223641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 14425338 - 14425231
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||||||   ||||||| |||||||||||||||||| |||||||| |||| | |||||| |||||||||    
T  14425338 ggaaaagcacaggaatcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttctagagaaacttcacagctaataggtgagaaac 14425239  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  14425238 tttgggaa 14425231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 37439038 - 37438951
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||||| |||| ||||| |||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  37439038 atcaactgtgaatttcggcgtgtagaatgaactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 37438951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 4106804 - 4106722
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  4106804 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac 4106722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 4110656 - 4110574
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  4110656 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac 4110574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 15965671 - 15965753
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  15965671 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac 15965753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 15969595 - 15969677
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  15969595 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac 15969677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 15973519 - 15973601
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  15973519 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac 15973601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 45904040 - 45903938
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||||||| |||||||||||||||||| | ||| ||||  ||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  45904040 ggaaaagcacaggaaacattaactgtgaatttcggtgtattgaaagcacattgtgagctctctatttatagagaaagttccaaagtaataagtgagaaac 45903941  T
Q  119 ttt 121  Q
    |||    
T  45903940 ttt 45903938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 29827 - 29934
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||| ||||||||||||||||   ||||||| ||||||||| ||||||||||||| ||| |||| |||||||| |||||||||    
T  29827 ggaaaagcacaggaatcatcatctgtgaatttcggtgtcctgaatgcattgtgtgagccctctatttatagaaaaatttcacaactaataggtgagaaac 29926  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  29927 tttgggaa 29934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 8197051 - 8197158
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| ||    |||||| ||||||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  8197051 ggaaaagcacaggaagcatcaactgtgaatttcggggtccataatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaac 8197150  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  8197151 tttgggaa 8197158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 8488884 - 8488782
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||| | ||||||||||| ||||| |||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  8488884 gaaaagcacaggaagcatcaactgtaactttcggtgtgtagaatg-actgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 8488786  T
Q  120 ttgg 123  Q
    ||||    
T  8488785 ttgg 8488782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 35456401 - 35456328
Alignment:
Q  52 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  35456401 ggtgtgtggaatgcactatgtgaattctctatttatagagaaaattcacaactaataag-gagaaactttgggaa 35456328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 18699272 - 18699200
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagaga 92  Q
    ||||| || ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  18699272 gaaaagcacaggaagcatcaagtgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 18699200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 47540985 - 47540907
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||| ||||| ||||| ||| ||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  47540985 tttcgatgtgtagaatgaactatgtgaactttctatttatagagaaaattcacaactaatatgtgagaaactttgggaa 47540907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 11997472 - 11997395
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||| |||||| ||||| |||  ||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  11997472 tttcagtgtgtagaatgtactacgtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaa 11997395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 12899197 - 12899131
Alignment:
Q  60 gaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||| ||||| |||  ||||||||||||||||||| | ||||||||||||||||||||||||    
T  12899197 gaatgcactatgtgatctcattatttatagagaaaattcacagctaataagtgagaaactttgggaa 12899131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 53358690 - 53358805
Alignment:
Q  8 ggagcagagagggaaaaacataggaaacatcaactgtga--atttcggtgtgtggaatgcactgtg--tgagctctctatttatagagaaaattcaaaac 103  Q
    |||| ||||||| ||||||| | ||| |||||||| |||  ||| |||||||| ||||||| ||||  ||||||||||||||||| ||||| |||| |||    
T  53358690 ggagaagagaggaaaaaacacatgaagcatcaactatgacaattacggtgtgtagaatgcattgtgtgtgagctctctatttataaagaaagttcacaac 53358789  T
Q  104 taataagtgagaaact 119  Q
    |||||||||| |||||    
T  53358790 taataagtgaaaaact 53358805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 429057 - 429117
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaata 108  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||||| || |||||    
T  429057 tttcggtgtgtggaatgaactttgtgagctctttatttatagagaaaattcacaagtaata 429117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 8070838 - 8070888
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  8070838 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 8070888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 14671993 - 14672048
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgag 75  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  14671993 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcagtgtgtgag 14672048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 16023191 - 16023238
Alignment:
Q  79 tctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  16023191 tctatttatagagaaaattcacaactaatatgtgacaaactttgggaa 16023238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 3034805 - 3034855
Alignment:
Q  121 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  3034805 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 3034855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 3673727 - 3673777
Alignment:
Q  121 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  3673727 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 3673777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 8884332 - 8884382
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  8884332 tgggaatttgtgtttagtctttttaactcagtttccacacatgttccaaca 8884382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 8889078 - 8889128
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  8889078 tgggaatttgtgtttagtctttttaactcagtttccacacatgttccaaca 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 16043129 - 16043207
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||  ||||||| | || |||| ||||||||||||||||| |||   |||||||||||| ||||||||||||    
T  16043129 tttcggtgtgaagaatgcattttgagagccctctatttatagagaaagttctctactaataagtgaaaaactttgggaa 16043207  T

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Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 18011990 - 18012043
Alignment:
Q  70 tgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||| | ||||||||||||||||||| |||||||| |||| |||||||||    
T  18011990 tgtgagctatttatttatagagaaaattcacaactaatatgtgataaactttgg 18012043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 49020114 - 49020159
Alignment:
Q  81 tatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  49020114 tatttatagagaaaattcacaactaataagtgataaattttgggaa 49020159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 3166233 - 3166194
Alignment:
Q  68 tgtgtgagctctctatttatagagaaaattcaaaactaat 107  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  3166233 tgtgtgagctctctatttatagaaaaaattcataactaat 3166194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 3693784 - 3693831
Alignment:
Q  124 gaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 170  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||    
T  3693784 gaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 3693831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 18467836 - 18467875
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  18467836 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 18467875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 32473495 - 32473456
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  32473495 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 32473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 39775199 - 39775160
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  39775199 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 39775160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 14438170 - 14438132
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  14438170 gaaaaacacaggaagcatcaactgtgaatttcggtgtgt 14438132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 16048621 - 16048699
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||  |||| || | || |||| ||||||||||||||||| |||   |||||||||||| ||||||||||||    
T  16048621 tttcggtgtgaagaatacattttgagagccctctatttatagagaaagttctctactaataagtgaaaaactttgggaa 16048699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 19340123 - 19340176
Alignment:
Q  70 tgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||| |||||||||| |||||||||| || ||||| || |||||||||||    
T  19340123 tgtgagctatctatttataaagaaaattcacaaataatatgttagaaactttgg 19340176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 47540571 - 47540522
Alignment:
Q  72 tgagctctctatttatagagaaaattcaaaactaataagtgagaaacttt 121  Q
    ||||| || ||||| ||||||||||||| |||||||| ||||||||||||    
T  47540571 tgagccctttatttttagagaaaattcacaactaatatgtgagaaacttt 47540522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 9386 - 9273
Alignment:
Q  8 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 107  Q
    |||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  9386 ggagaagagaggaaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaat 9287  T
Q  108 aagtgagaaacttt 121  Q
    ||||||||||||||    
T  9286 aagtgagaaacttt 9273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 8814 - 8764
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  8814 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 8764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 4237836 - 4237730
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4237836 ggaaaaacacaggaagcatcaactgtgaatttcggtgcgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 4237737  T
Q  119 tttggga 125  Q
    |||||||    
T  4237736 tttggga 4237730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 4242575 - 4242469
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4242575 ggaaaaacacaggaagcatcaactgtgaatttcggtgcgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 4242476  T
Q  119 tttggga 125  Q
    |||||||    
T  4242475 tttggga 4242469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 31449360 - 31449254
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  31449360 ggaaaaacacagaaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 31449261  T
Q  119 tttggga 125  Q
    |||||||    
T  31449260 tttggga 31449254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 43302179 - 43302073
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  43302179 ggaaaaacataggaagcatcaactgtgaatttcgatgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaagtaataagtgagaaac 43302080  T
Q  119 tttggga 125  Q
    |||||||    
T  43302079 tttggga 43302073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 8330858 - 8330752
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8330858 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 8330759  T
Q  119 tttggga 125  Q
    |||||||    
T  8330758 tttggga 8330752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 37772306 - 37772412
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  37772306 ggaaaaacacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 37772405  T
Q  119 tttggga 125  Q
    |||||||    
T  37772406 tttggga 37772412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 4582790 - 4582684
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| ||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||| |||||||| ||||||||||    
T  4582790 gaaaaacacaggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaact 4582691  T
Q  120 ttgggaa 126  Q
    |||||||    
T  4582690 ttgggaa 4582684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 25367481 - 25367375
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| | ||| |||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||    
T  25367481 ggaaaaacacatgaagcatcaattgtgaatttcggtgtatggaaagcactgtgtgaactctctatttatagagaaagttcacaactagtaagtgagaaac 25367382  T
Q  119 tttggga 125  Q
    |||||||    
T  25367381 tttggga 25367375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 21384344 - 21384447
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  21384344 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 21384443  T
Q  120 ttgg 123  Q
    ||||    
T  21384444 ttgg 21384447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 21387764 - 21387867
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  21387764 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 21387863  T
Q  120 ttgg 123  Q
    ||||    
T  21387864 ttgg 21387867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 18862048 - 18861966
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  18862048 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 18861966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 22104274 - 22104381
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||| |||||||||||||||   ||||||| ||||||||||||||||||||||||||| |||| | |||||| |||||||||    
T  22104274 ggaaaagcacaggaatcatcaaatgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaac 22104373  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  22104374 tttgggaa 22104381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 19393225 - 19393119
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| ||||||||||||||||||| ||    |||||| |||||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  19393225 gaaaagcacaggaagcatcaactgtgaatttcggggtccataatgcattgtgtgagatctctatttatagagaaatttcacaactaataagtgagaaact 19393126  T
Q  120 ttgggaa 126  Q
    |||||||    
T  19393125 ttgggaa 19393119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 21827417 - 21827335
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||| | ||||||||||||||||||    
T  21827417 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatcatttacaactaataagtgagaaac 21827335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 34818201 - 34818099
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||||||   ||| ||||||||||| ||||||||||||||||||| |||| ||||||||| ||||||||    
T  34818201 ggaaaagcacaggaagcatcaactgtgaatttcggtgtaccgaaagcactgtgtgaactctctatttatagagaaagttcacaactaataactgagaaac 34818102  T
Q  119 ttt 121  Q
    |||    
T  34818101 ttt 34818099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 16066711 - 16066607
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||| | ||||| ||||||||||||||||||||||    | |||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  16066711 gaaaaatacaggaagcatcaactgtgaatttcggtgtccatagtgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaact 16066612  T
Q  120 ttggg 124  Q
    |||||    
T  16066611 ttggg 16066607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 21411638 - 21411726
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||||||||||| ||||||||| || ||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  21411638 catcaactgtgaatttcggtgtgtagaatgcactatgcgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 21411726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 21806130 - 21806218
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||||||||||| ||||||||| || ||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  21806130 catcaactgtgaatttcggtgtgtagaatgcactatgcgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 21806218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 23915092 - 23915195
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || | || | ||||||||| |||||||||    
T  23915092 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaataaatgagaaact 23915191  T
Q  120 ttgg 123  Q
    ||||    
T  23915192 ttgg 23915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 14036083 - 14036161
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||| | | ||||||||||||||||||||| ||||||||  | ||||| |||||||||||||||||    
T  14036083 tttcggtgtgtggaatgaattttgtgagctctctatttatagaaaaaattcacgattaatatgtgagaaactttgggaa 14036161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 25733650 - 25733590
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatag 89  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||||| |||||||||||||    
T  25733650 aggaagcatcaactgtgaatttcggtgtgtagaatgcactttgtgagttctctatttatag 25733590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 31448797 - 31448747
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  31448797 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 31448747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 4237274 - 4237222
Alignment:
Q  121 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaacact 172  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  4237274 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaacact 4237222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 4242013 - 4241963
Alignment:
Q  121 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  4242013 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 4241963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 17153198 - 17153244
Alignment:
Q  80 ctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  17153198 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaa 17153244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 17157486 - 17157440
Alignment:
Q  80 ctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  17157486 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaa 17157440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 42972749 - 42972823
Alignment:
Q  53 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaat 127  Q
    |||||| ||||||||| |||||  | |||||||||||||||||||    ||||| ||||||||||||||||||||    
T  42972749 gtgtgtagaatgcactatgtgaaatatctatttatagagaaaatttcccactaaaaagtgagaaactttgggaat 42972823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 14036609 - 14036654
Alignment:
Q  128 ttgtgtttagtctttttactt--aatttccacacatgttccaacac 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||    
T  14036609 ttgtgtttagtcttttaacttctaatttccacacatgttccaacac 14036654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 15197266 - 15197331
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtga 113  Q
    |||||||| |||||||| ||| | ||| |||||||||||||| | ||||||| |||||||| ||||    
T  15197266 tttcggtgcgtggaatgaactatctgaactctctatttatagtgtaaattcacaactaatatgtga 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 10160215 - 10160109
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  10160215 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttgtagagaaagttcacaactaataagtgagaaac 10160116  T
Q  119 tttggga 125  Q
    |||||||    
T  10160115 tttggga 10160109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 25375499 - 25375595
Alignment:
Q  30 ggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||| ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25375499 ggaatcatcaactgtgaatttcagtgtgtagaatgcactgtgtaagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaa 25375595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 28855730 - 28855833
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||| ||||||||| ||||||||    
T  28855730 ggaaaaacataggaatcatcaactgtgaatttcggtgtgtcgaatgcactttgtgagctctctatttatag-ggaaattcacaactaataaatgagaaac 28855828  T
Q  119 tttgg 123  Q
    |||||    
T  28855829 tttgg 28855833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 30658780 - 30658882
Alignment:
Q  23 aaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 122  Q
    ||||||| ||| ||||||||||||||||  || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  30658780 aaacatatgaagcatcaactgtgaatttgtgtatgtggaatgcactgtgtgagctctctatttatggagaaagttcacaactaataagtgagaaactttg 30658879  T
Q  123 gga 125  Q
    |||    
T  30658880 gga 30658882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 1284130 - 1284217
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  1284130 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 1284217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 34070029 - 34070125
Alignment:
Q  30 ggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  34070029 ggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaa 34070125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 22845001 - 22845108
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| | ||| |||||| ||||||||||| | |||  | |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22845001 ggaaaaacacaagaagcatcaattgtgaatttcgttctgtacattgcactatgtgagctctctatttatagagaaaattcacaactaataagtgagaaac 22845100  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  22845101 tttgggaa 22845108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 23068247 - 23068144
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||| ||||||||    
T  23068247 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagcgagaaact 23068148  T
Q  120 ttgg 123  Q
    ||||    
T  23068147 ttgg 23068144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 30344394 - 30344312
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  30344394 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 30344312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 26897215 - 26897333
Alignment:
Q  8 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 107  Q
    |||| ||||||  |||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||||||| |||| |||||||    
T  26897215 ggagaagagagcaaaaagcacaggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaat 26897314  T
Q  108 aagtgagaaactttgggaa 126  Q
    | |||||||||||||||||    
T  26897315 aggtgagaaactttgggaa 26897333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 24292957 - 24292850
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||||||| |||| |||||| | |||||||||    
T  24292957 ggaaaagcacaggaagcatcaactgtgaatttcggggtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaaaaggtgagaaac 24292858  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  24292857 tttgggaa 24292850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 42248827 - 42248930
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||| |||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||  |||||||| ||||||||||    
T  42248827 gaaaagcacaggaagcatcaattgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttccgaactaataggtgagaaact 42248926  T
Q  120 ttgg 123  Q
    ||||    
T  42248927 ttgg 42248930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 6856797 - 6856903
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| ||||||||||||||||||||     ||||| | ||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  6856797 gaaaagcacaggaagcatcaactgtgaatttcggtccccagaatgtattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaact 6856896  T
Q  120 ttgggaa 126  Q
    |||||||    
T  6856897 ttgggaa 6856903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 377784 - 377683
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| ||||| ||||||||||||||||||||||  | |||||| | ||||||||||||||||||||| ||| |||| |||||| | ||||||||||    
T  377784 gaaaaacacaggaagcatcaactgtgaatttcggtgtccgtaatgcattatgtgagctctctatttatagaaaaacttcacaactaaaaggtgagaaact 377685  T
Q  120 tt 121  Q
    ||    
T  377684 tt 377683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 7559844 - 7559756
Alignment:
Q  21 aaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataa 109  Q
    ||||||| ||||| ||||||||||||||||  ||||   ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  7559844 aaaaacacaggaagcatcaactgtgaatttaagtgtccagaatgcattgtgtgagctctctatttatagagaaaattcacaactaataa 7559756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 24286389 - 24286282
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||||||| |||| |||||| | ||||||| |    
T  24286389 ggaaaagcacaggaagcatcaactgtgaatttcggggtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaaaaggtgagaagc 24286290  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  24286289 tttgggaa 24286282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 30635393 - 30635502
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaattt-cggtgtgtggaatgcactgtgtgagctctc--tatttatagagaaaattcaaaactaataagtgagaa 116  Q
    ||||| || ||||| |||||||||||||||| ||||||||  |||||||| ||||||||||   |||||||| |||||||||| ||||||||||||||||    
T  30635393 gaaaagcacaggaagcatcaactgtgaattttcggtgtgtaaaatgcactttgtgagctctaaatatttataaagaaaattcacaactaataagtgagaa 30635492  T
Q  117 actttgggaa 126  Q
    |||| |||||    
T  30635493 acttggggaa 30635502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 9785759 - 9785851
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||| ||||||||||||||||||||||||  |||||||  |||||| ||||||||||||| || | || | |||||||||||||||||||||||    
T  9785759 aggaagcatcaactgtgaatttcggtgtgtaaaatgcac--tgtgagttctctatttatagggatagtttacaactaataagtgagaaactttgg 9785851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 6297371 - 6297282
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 125  Q
    ||||||||||||||||| |||| | ||| | |||||||||||||||||||| |||||||| || | ||||||||||||| |||||||||||    
T  6297371 catcaactgtgaatttctgtgtatagaaagaactgtgtgagctctctattt-tagagaaagttgacaactaataagtgataaactttggga 6297282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 17327708 - 17327766
Alignment:
Q  68 tgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||    
T  17327708 tgtgtgagctctctatttatagagaaaatttacaactaataagtgagaaattttgggaa 17327766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 17453053 - 17452974
Alignment:
Q  52 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaatt-----caaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||     | || ||||||||||||||||||||||||    
T  17453053 ggtgtgtggaatgtactatgtgagatctctatttatagagaaaatttacaactaatctaataagtgagaaactttgggaa 17452974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 35602757 - 35602804
Alignment:
Q  124 gaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  35602757 gaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 35602804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 10159651 - 10159601
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  10159651 tgggaatttgtgtttagtctttttaactcaatttccacagatgttccaaca 10159601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 18345035 - 18345074
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  18345035 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 18345074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 30659318 - 30659373
Alignment:
Q  121 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaacacttcc 175  Q
    ||||| ||| ||||||||||||||| || |||||||||||||||||||||| ||||    
T  30659318 tgggagtttttgtttagtctttttaactcaatttccacacatgttccaacaattcc 30659373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 30637112 - 30637177
Alignment:
Q  32 aaacatcaactgtgaattt-cggtgtgtggaatgcactgtgtgagctct--ctatttatagagaaa 94  Q
    ||||||||||||||||||| ||||||||  |||||||| ||||||||||   ||||||||||||||    
T  30637112 aaacatcaactgtgaattttcggtgtgtaaaatgcactttgtgagctctaaatatttatagagaaa 30637177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 30641577 - 30641499
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||| |||  || | ||  |||||||||||||||| ||  |||||||| |||||||||||| ||||    
T  30641577 tttcggtgtgtggaatgaactacgtaatctacctatttatagagaaaaatctcaactaatatgtgagaaacttttggaa 30641499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 17968434 - 17968397
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgt 56  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  17968434 ggaaaaacacaggaagcatcaactgtgaatttcggtgt 17968397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 40232873 - 40232777
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 125  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  40232873 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 40232777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 3094688 - 3094794
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  3094688 ggaaaaacacaggaagtatcaactgtgaatttcggtgtgtggaatgcactgtgtgaactctctatttatagagaaagttcacaactaataagtgagaaac 3094787  T
Q  119 tttggga 125  Q
    |||||||    
T  3094788 tttggga 3094794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 17213939 - 17213832
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||||||||||||||||||||| | ||||||||||| | ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  17213939 ggaaaaacataggaaacatcaactataaatttcggtgtatcgaatgtactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 17213840  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  17213839 tttgggaa 17213832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 41097437 - 41097347
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 125  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  41097437 catcaactgtgaatttcggtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 41097347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 13893915 - 13894022
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||| |||| |||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  13893915 ggaaaaacacaggaagcatcaactgtgattttcagtgtgtagaatgcattgtgtgaactctctatttatagagaaaattcacaactaataagtgagaaac 13894014  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  13894015 tttgggaa 13894022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 39243517 - 39243414
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  39243517 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 39243418  T
Q  120 ttgg 123  Q
    ||||    
T  39243417 ttgg 39243414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 39247072 - 39246969
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  39247072 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 39246973  T
Q  120 ttgg 123  Q
    ||||    
T  39246972 ttgg 39246969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 41387454 - 41387366
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  41387454 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 41387366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 1067080 - 1067187
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||||||||| |||    |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  1067080 ggaaaaacacaggaagcatcaactgtgaatttcgttgtccataatgcaatgtgtgagttctctatttatagagaaaattcacaactaataagtgagaaac 1067179  T
Q  119 tttgggaa 126  Q
    ||| ||||    
T  1067180 tttaggaa 1067187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 14804103 - 14804210
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| || | ||||||| || |||||||||||||||||||||||| |||| |||||||| |||||||||    
T  14804103 ggaaaagcacaggaatcatcaactgtgaatttcggggtctagaatgcattgcgtgagctctctatttatagagaaatttcacaactaataggtgagaaac 14804202  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  14804203 tttgggaa 14804210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 14819587 - 14819678
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  14819587 catcaactgtgaatttcggggtctagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaa 14819678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 22428690 - 22428584
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  22428690 ggaaaagcacaggaatcatcaactgtgaatttcgg-gtccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaac 22428592  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  22428591 tttgggaa 22428584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 1924532 - 1924450
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  1924532 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 1924450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 20923546 - 20923464
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  20923546 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 20923464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 21498260 - 21498357
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||  |||||||| |||||||||||||||||    
T  21498260 aggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaactttgggaa 21498357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 52100716 - 52100610
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| |||||||||||  ||||||||||| ||||||| ||| ||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  52100716 ggaaaaacacaggaatcatcaactgtgt-tttcggtgtgttgaatgcattgtatgagccctctatttatagagaaacttcacaactaataggtgagaaac 52100618  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  52100617 tttgggaa 52100610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 26198957 - 26199064
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||| |||| | |||| | |||| ||||    
T  26198957 ggaaaagcacaggaagcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaaaaggtgaaaaac 26199056  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  26199057 tttgggaa 26199064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 16836765 - 16836701
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattca 99  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  16836765 catcaactgtgaatttcggtgtccagaatgcactgtgtgagctctctatttatagagaaaattca 16836701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 19725400 - 19725295
Alignment:
Q  18 gggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaa 117  Q
    ||||||| || ||||| |||||||||||||||||||||    ||||||| ||||||| |||||||||||||||||||  ||| ||||||||| |||||||    
T  19725400 gggaaaagcacaggaagcatcaactgtgaatttcggtgcccagaatgcaatgtgtgaactctctatttatagagaaa--tcacaactaataaatgagaaa 19725303  T
Q  118 ctttggga 125  Q
    ||||||||    
T  19725302 ctttggga 19725295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 33055636 - 33055723
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 107  Q
    |||||||| | ||| |||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  33055636 gaaaaacacaagaatcatcaactgtgaattttggtgtatagaatgcactgtgtgaactctctatttatagagaaagttcacaactaat 33055723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 2367643 - 2367749
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| ||||||||||||||||| ||||   ||||||| ||||||||||||||||||||||||||  || | | |||||| ||||||||||    
T  2367643 gaaaagcacaggaagcatcaactgtgaatttccgtgtccagaatgcattgtgtgagctctctatttatagagaagctttacagctaataggtgagaaact 2367742  T
Q  120 ttgggaa 126  Q
    |||||||    
T  2367743 ttgggaa 2367749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 2384740 - 2384634
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| ||||||||||||||||| ||||   ||||||| ||||||||||||||||||||||||||  || | | |||||| ||||||||||    
T  2384740 gaaaagcacaggaagcatcaactgtgaatttccgtgtccagaatgcattgtgtgagctctctatttatagagaagctttagagctaataggtgagaaact 2384641  T
Q  120 ttgggaa 126  Q
    |||||||    
T  2384640 ttgggaa 2384634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 23285300 - 23285227
Alignment:
Q  53 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||| ||||||| | |||| ||| ||||||||||||||||||||| || ||||| ||||||| |||||||||    
T  23285300 gtgtgtagaatgcaatttgtgggctatctatttatagagaaaattcacaattaatatgtgagaacctttgggaa 23285227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 8267292 - 8267244
Alignment:
Q  74 agctctctatttatagagaaaattcaaaactaataagtgagaaactttg 122  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  8267292 agctctctatttatagagaaagttcacaactaataagtgataaactttg 8267244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 23254648 - 23254584
Alignment:
Q  53 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaa 117  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||| | || ||||| ||||||||    
T  23254648 gtgtgtagaatgcactttgtgtgctctctatttatagagaaaatttataattaatatgtgagaaa 23254584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 26319667 - 26319593
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaa 94  Q
    ||||| || ||||| |||||||||||  ||| ||||||  ||||||| |||||||||||| ||||||||||||||    
T  26319667 gaaaatcacaggaagcatcaactgtgttttttggtgtgaagaatgcattgtgtgagctctttatttatagagaaa 26319593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 19726975 - 19727067
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 122  Q
    ||||| |||||||||||||||||||| |   ||||||  |||||||||||||||||||| ||||||   || ||||||||| ||||||| ||||    
T  19726975 aggaagcatcaactgtgaatttcggtatccagaatgct-tgtgtgagctctctatttatcgagaaatcacacaactaataaatgagaaattttg 19727067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 26927192 - 26927153
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  26927192 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 26927153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 10135950 - 10135988
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  10135950 gaaaaacacaggaagcatcaactgtgaatttcggtgtgt 10135988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 27307406 - 27307360
Alignment:
Q  121 tgggaatttgtgtttagtctttttacttaatttccacacatgttcca 167  Q
    |||||||||||||||||||||||  || ||| |||||||||||||||    
T  27307406 tgggaatttgtgtttagtcttttacctcaatatccacacatgttcca 27307360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 27308342 - 27308280
Alignment:
Q  60 gaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 122  Q
    ||||| ||| ||||||| ||||||||||||||||||||||  |||||||   |||||||||||    
T  27308342 gaatgaactatgtgagcactctatttatagagaaaattcactactaatataagagaaactttg 27308280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 8273108 - 8273059
Alignment:
Q  121 tgggaatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    |||||||||||||||| | |||| ||| |||||||||||||||| |||||    
T  8273108 tgggaatttgtgtttatttttttaactcaatttccacacatgtttcaaca 8273059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 14204495 - 14204447
Alignment:
Q  124 gaatttgtgttta--gtctttttacttaatttccacacatgttccaaca 170  Q
    |||||||||||||  | ||||||||| ||||||||||||||||||||||    
T  14204495 gaatttgtgtttatagactttttactcaatttccacacatgttccaaca 14204447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 51040982 - 51040942
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtg 59  Q
    ||||||||| || ||||||||||||||||||||| ||||||    
T  51040982 ggaaaaacacagaaaacatcaactgtgaatttcgatgtgtg 51040942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 8076649 - 8076755
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  8076649 ggaaaaacacatgaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacatctaataagtgagaaac 8076748  T
Q  119 tttggga 125  Q
    |||||||    
T  8076749 tttggga 8076755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 9650466 - 9650349
Alignment:
Q  8 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 107  Q
    |||| ||||||| ||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  9650466 ggagaagagaggaaaaaacacaggaagcatcaactgtgaatttcgatttgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaat 9650367  T
Q  108 aagtgagaaactttggga 125  Q
    ||||||||||||||||||    
T  9650366 aagtgagaaactttggga 9650349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 27256836 - 27256942
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  27256836 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagcactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 27256935  T
Q  119 tttggga 125  Q
    |||||||    
T  27256936 tttggga 27256942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 18426543 - 18426630
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  18426543 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 18426630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 40864858 - 40864752
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||||||||||||||||| | ||| | ||||||||||||||||||||||||||||| |||| |||||||||||||| |||    
T  40864858 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagtactgtgtgagctctctatttatagagaaagttcacaactaataagtgagtaac 40864759  T
Q  119 tttggga 125  Q
    |||||||    
T  40864758 tttggga 40864752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 20488563 - 20488651
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  20488563 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 20488651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 8954746 - 8954655
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||| ||||||||| ||  |||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  8954746 catcaactgggaatttcggggttcggaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaactttgggaa 8954655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 16459875 - 16459772
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| || | || | |||||||||||||||||||    
T  16459875 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagggatagtttacaactaataagtgagaaact 16459776  T
Q  120 ttgg 123  Q
    ||||    
T  16459775 ttgg 16459772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 45169409 - 45169322
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  45169409 atcaactgtgaatttcggtgtgtagaatgaactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 45169322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 20485202 - 20485288
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaacttt 121  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||||    
T  20485202 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaacttt 20485288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 14928130 - 14928027
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||   || | |||||||||||||||||||    
T  14928130 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagtcctctatttatagagatggtttacaactaataagtgagaaact 14928031  T
Q  120 ttgg 123  Q
    ||||    
T  14928030 ttgg 14928027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 15351596 - 15351493
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||   || | |||||||||||||||||||    
T  15351596 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagtcctctatttatagagatggtttacaactaataagtgagaaact 15351497  T
Q  120 ttgg 123  Q
    ||||    
T  15351496 ttgg 15351493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 9008789 - 9008863
Alignment:
Q  52 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9008789 ggtgtgtggaatgcgctatgagagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaa 9008863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 838925 - 838820
Alignment:
Q  21 aaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactt 120  Q
    ||||||| ||||| ||||||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||  |||||||| |||||||||||    
T  838925 aaaaacacaggaagcatcaaccgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcgcaactaataggtgagaaactt 838826  T
Q  121 tgggaa 126  Q
    ||||||    
T  838825 tgggaa 838820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 1204105 - 1204000
Alignment:
Q  21 aaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactt 120  Q
    ||||||| ||||| ||||||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||  |||||||| |||||||||||    
T  1204105 aaaaacacaggaagcatcaaccgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcgcaactaataggtgagaaactt 1204006  T
Q  121 tgggaa 126  Q
    ||||||    
T  1204005 tgggaa 1204000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 47102138 - 47102203
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatt 84  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47102138 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatt 47102203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 29727299 - 29727211
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 107  Q
    |||||| || |||||||||||||||||||||| |||||   |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  29727299 ggaaaagcacaggaaacatcaactgtgaattttggtgtccagaatgcaccgtgtgagctctctatttatagagaaaattcacaactaat 29727211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 14259606 - 14259709
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||   |||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  14259606 gaaaagcacaggaagcatcaactgtgaatttcaaagtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 14259705  T
Q  120 ttgg 123  Q
    ||||    
T  14259706 ttgg 14259709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 36477577 - 36477674
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| ||||| |||||||||||||||||||||||       || ||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  36477577 gaaaaacacaggaagcatcaactgtgaatttcggtgtg-------cattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaact 36477669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 846093 - 845996
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||| |||||||  |||||||||| || | ||||||| ||||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  846093 aggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaa 845996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 853470 - 853373
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||| |||||||  |||||||||| || | ||||||| ||||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  853470 aggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaa 853373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 1211474 - 1211377
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||| |||||||  |||||||||| || | ||||||| ||||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  1211474 aggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaa 1211377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 19096853 - 19096957
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaattt-cggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaa 117  Q
    ||||||||| | ||| |||||||||||||||| ||| ||   ||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  19096853 ggaaaaacacatgaagcatcaactgtgaattttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaa 19096952  T
Q  118 ctttg 122  Q
    |||||    
T  19096953 ctttg 19096957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 32302439 - 32302542
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||  ||| || ||| |||||||||||| | || | ||||||||||||||||| |    
T  32302439 gaaaagcacaggaaacatcaactgtgaatttcggtgtgtagaatgcaccatgtcagttctatatttatagagatagtttacaactaataagtgagaaatt 32302538  T
Q  120 ttgg 123  Q
    ||||    
T  32302539 ttgg 32302542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 10532295 - 10532221
Alignment:
Q  52 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||||||||||||  ||||  |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  10532295 ggtgtgtggaatgcactacgtgaattctctacttatagagaaaattcacaactaataagtgagaaactttgggaa 10532221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 19640914 - 19641004
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 125  Q
    |||||||||||||||||||||| | ||| | ||  ||||| | ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  19640914 catcaactgtgaatttcggtgtatcgaaagaacaatgtgaacactctatttatagagaaagttcacaactaataagtgagaaactttggga 19641004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 10499566 - 10499494
Alignment:
Q  52 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggg 124  Q
    |||||||||||||||||    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10499566 ggtgtgtggaatgcactaccagagttctctatttatagagaaaattcacaactaataagtgagaaactttggg 10499494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 10504595 - 10504523
Alignment:
Q  52 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggg 124  Q
    |||||||||||||||||    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10504595 ggtgtgtggaatgcactaccagagttctctatttatagagaaaattcacaactaataagtgagaaactttggg 10504523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 11017557 - 11017473
Alignment:
Q  38 caactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 122  Q
    ||||||||||||||||||  | ||||| |||| | || ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  11017557 caactgtgaatttcggtggatagaatgtactgcgcgacctctctatttatatagaaaattcacaactaataagtgagaaactttg 11017473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 13343891 - 13343817
Alignment:
Q  52 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||| |   |||| || |||||||||||||||||||| |||||||||| |||||||||||||||    
T  13343891 ggtgtgtggaatgcattacctgagttcactatttatagagaaaattcacaactaataagagagaaactttgggaa 13343817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 9649893 - 9649844
Alignment:
Q  121 tgggaatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  9649893 tgggaatttgtgtttagtcttttaactcaatttccacacatgttccaaca 9649844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 16580844 - 16580932
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||||| |||||  ||||||||||||||| || |||||||| | || | || | || ||||||||||||||||||||    
T  16580844 catcaactgtgaatttcgttgtgtacaatgcactgtgtgagttccctatttattgggatagtttacaattaataagtgagaaactttgg 16580932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 2629290 - 2629353
Alignment:
Q  54 tgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaa 117  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||| | |||||||| ||||||||    
T  2629290 tgtgtggaatgaactatgtgagctctatatttatagagaaaatttacaactaatatgtgagaaa 2629353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 47102692 - 47102742
Alignment:
Q  121 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 170  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  47102692 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 47102742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 1043847 - 1043922
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||  ||||| | | ||| |||||| ||||||||||||||||||| || ||||| ||||||||||||||    
T  1043847 tttcggtgtgcagaatgaattatgtcagctctttatttatagagaaaattcacaattaatatgtgagaaactttgg 1043922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 11297381 - 11297455
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 122  Q
    ||||||||||||||||  |||  |||| ||  |||||||||||||||| ||| |||||||| |||||||||||||    
T  11297381 tttcggtgtgtggaataaactacgtgatctacctatttatagagaaaaatcacaactaatatgtgagaaactttg 11297455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 15566012 - 15566081
Alignment:
Q  55 gtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||||| ||||| ||||||||  ||||||| |||||| ||| |||||||| |||||||||||| ||||    
T  15566012 gtgtggaatgaactgtatgagctct--atttatatagaaaactcacaactaatatgtgagaaacttttggaa 15566081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 26341831 - 26341870
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  26341831 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 26341870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 43457143 - 43457097
Alignment:
Q  124 gaatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    ||||||||||||| |||||| ||||||||| ||| ||||||||||||    
T  43457143 gaatttgtgtttattcttttaacttaattttcacgcatgttccaaca 43457097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 10488759 - 10488686
Alignment:
Q  53 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||||||| ||| | |||||||| |||||||| | |||| ||| ||||||||   |||||||||||||||    
T  10488759 gtgtgtggaatgaactatatgagctctatatttataaaaaaaaatcacaactaatataggagaaactttgggaa 10488686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 10499056 - 10499011
Alignment:
Q  125 aatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    ||||| ||||||||||||| | | ||||||||||||||||||||||    
T  10499056 aatttatgtttagtcttttaattcaatttccacacatgttccaaca 10499011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 10504085 - 10504040
Alignment:
Q  125 aatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    ||||| ||||||||||||| | | ||||||||||||||||||||||    
T  10504085 aatttatgtttagtcttttaattcaatttccacacatgttccaaca 10504040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 13343356 - 13343311
Alignment:
Q  125 aatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    ||||||||||| ||||||| | | ||||||||||||||||||||||    
T  13343356 aatttgtgttttgtcttttaattcaatttccacacatgttccaaca 13343311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 44509874 - 44509829
Alignment:
Q  13 agagagggaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    ||||||| ||||||| ||||||||||||| ||||||||| ||||||    
T  44509874 agagaggaaaaaacacaggaaacatcaaccgtgaatttcagtgtgt 44509829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 23866884 - 23866924
Alignment:
Q  121 tgggaatttgtgtttagtctttttacttaatttccacacat 161  Q
    ||||||||||||||||||||||| ||| ||||| |||||||    
T  23866884 tgggaatttgtgtttagtcttttaactcaattttcacacat 23866924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 13521491 - 13521374
Alignment:
Q  8 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 107  Q
    |||| ||||||| ||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  13521491 ggagaagagaggaaaaaacacaggaagcatcaactgtgaatttcgatttgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaat 13521392  T
Q  108 aagtgagaaactttggga 125  Q
    ||||||||||||||||||    
T  13521391 aagtgagaaactttggga 13521374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 3997557 - 3997451
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| ||||||||||||||||||||||||| || ||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3997557 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtgtaaagcaatatgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 3997458  T
Q  119 tttggga 125  Q
    |||||||    
T  3997457 tttggga 3997451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 7902606 - 7902500
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  7902606 ggaaaagcacaggaagcatcaaatgtgaatttcggtgtgtgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 7902507  T
Q  119 tttggga 125  Q
    |||||||    
T  7902506 tttggga 7902500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 15225765 - 15225871
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  15225765 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactctgtgagctctctatttatagagaaatttcacaactaataggtgagaaact 15225864  T
Q  120 ttgggaa 126  Q
    |||||||    
T  15225865 ttgggaa 15225871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 47575277 - 47575361
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  47575277 catcaactttgaatttcggtgtgtggaatgcactgtgtgagctctctttttatagagaaaattcacaactaataagtgagaaact 47575361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 31297974 - 31297884
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 125  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||    
T  31297974 catcaattgtgaatttcggtgtatggaatgcactgtgtgagctctctatttatagagagagttcacaactaataagtgagaaactttggga 31297884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 34561023 - 34561129
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  34561023 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagcactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 34561122  T
Q  119 tttggga 125  Q
    |||||||    
T  34561123 tttggga 34561129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 12488414 - 12488501
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  12488414 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 12488501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 14868563 - 14868456
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  14868563 ggaaaagcacaggaatcatcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaac 14868464  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  14868463 tttgggaa 14868456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 14877371 - 14877478
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  14877371 ggaaaagcacaggaatcatcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaac 14877470  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  14877471 tttgggaa 14877478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 10713540 - 10713643
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||| | ||||||| |||||||||||    
T  10713540 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatgatttacaactaatgagtgagaaact 10713639  T
Q  120 ttgg 123  Q
    ||||    
T  10713640 ttgg 10713643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 10927310 - 10927413
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||| | ||||||| |||||||||||    
T  10927310 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatgatttacaactaatgagtgagaaact 10927409  T
Q  120 ttgg 123  Q
    ||||    
T  10927410 ttgg 10927413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 14899095 - 14899004
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||    
T  14899095 catcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaa 14899004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 15011310 - 15011207
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  15011310 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 15011211  T
Q  120 ttgg 123  Q
    ||||    
T  15011210 ttgg 15011207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 14953533 - 14953451
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  14953533 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 14953451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 25690610 - 25690692
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  25690610 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 25690692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 8660898 - 8660791
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||||||||| |||||||||  | |||||||||||||||||||||||| ||||||||||||  ||||||||||||  |||    
T  8660898 ggaaaagcacaggaagcatcaactgtgaatctcggtgtgtatactgcactgtgtgagctctctatttacagagaaaattcactactaataagtgaagaac 8660799  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  8660798 tttgggaa 8660791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 9185179 - 9185072
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||| |||||||||| ||   ||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  9185179 ggaaaagcacaggaatcatcaactctgaatttcggggtccagaatgcattgtgtgagctctctatttgtagagaaatttcacaactaataagtgagaaac 9185080  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  9185079 tttgggaa 9185072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 9191044 - 9190937
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||| |||||||||| ||    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  9191044 ggaaaagcacaggaatcatcaactctgaatttcggggtccataatgcattgtgtgagctctctatttgtagagaaatttcacaactaataagtgagaaac 9190945  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  9190944 tttgggaa 9190937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 41817381 - 41817455
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaa 93  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  41817381 ggaaaaacacaagaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagctctctatttacagagaa 41817455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 26034799 - 26034894
Alignment:
Q  31 gaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||| |||||| ||||| | ||   ||||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  26034799 gaaacatcgactgtgtatttcagggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaa 26034894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 39320173 - 39320267
Alignment:
Q  31 gaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||||||  | ||||||||| ||| ||||| | |||||||||||||||||||||| |||| |||| ||||||||||||||||| ||||||||    
T  39320173 gaaacatcaacgttaaatttcggtttgtcgaatgaattgtgtgagctctctatttatagtgaaagttcacaactaataagtgagaaa-tttgggaa 39320267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 13520918 - 13520869
Alignment:
Q  121 tgggaatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  13520918 tgggaatttgtgtttagtcttttaactcaatttccacacatgttccaaca 13520869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 52742684 - 52742616
Alignment:
Q  54 tgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 122  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| | |||||||| | |||||| ||||    
T  52742684 tgtgtggaatgaactatgtgagctctctatttatagagaaaattgacaactaatacgcgagaaattttg 52742616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 18023221 - 18023276
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgag 75  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  18023221 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcagtgtgtgag 18023276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 32545533 - 32545579
Alignment:
Q  70 tgtgagctctctatttatagagaaaattcaaaactaataagtgagaa 116  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||    
T  32545533 tgtgagctctctatttatagagaaaattcgcaactaatatgtgagaa 32545579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 26188129 - 26188056
Alignment:
Q  53 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||| |||||||||||  ||||| |||||||||||| ||  |||||| |||||||| |||||||||||| ||||    
T  26188129 gtgtctggaatgcactacgtgagttctctatttatatagttaattcacaactaatatgtgagaaactttaggaa 26188056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 55073774 - 55073847
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaacttt 121  Q
    |||||||||||  |||| |||  ||||| ||||||||||||||||||||||| ||||||||  || ||||||||    
T  55073774 tttcggtgtgtataatgaactacgtgagatctctatttatagagaaaattcacaactaatatatgtgaaacttt 55073847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 43477452 - 43477408
Alignment:
Q  79 tctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||| || |||||||||| |||||||||    
T  43477452 tctatttatagagaaaattcacaattaataagtgataaactttgg 43477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 5270894 - 5270856
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgt 58  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  5270894 gaaaaacacaggaagcatcaactgtgaatttcggtgtgt 5270856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 39320722 - 39320768
Alignment:
Q  124 gaatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    |||||||| |||| |||||| ||| ||||||||||||||||||||||    
T  39320722 gaatttgtatttaatcttttaactcaatttccacacatgttccaaca 39320768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 30867 - 30970
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| |||||||| |||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  30867 gaaaagcataggaagcatcaactgtgaatttcggtgtcttgaatgcattgtgtgagctctctatttatagagaaatttcacaactaataagtgagaaact 30966  T
Q  120 ttgg 123  Q
    ||||    
T  30967 ttgg 30970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 121166 - 121269
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  121166 gaaaagcataggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 121265  T
Q  120 ttgg 123  Q
    ||||    
T  121266 ttgg 121269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 47468 - 47362
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  47468 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 47369  T
Q  119 tttggga 125  Q
    |||||||    
T  47368 tttggga 47362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 52412 - 52306
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  52412 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 52313  T
Q  119 tttggga 125  Q
    |||||||    
T  52312 tttggga 52306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 30284 - 30390
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| |||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  30284 gaaaagcataggaagcatcaactgtgaatttcggggtgtcgaatgcagtgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaact 30383  T
Q  120 ttgggaa 126  Q
    |||||||    
T  30384 ttgggaa 30390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 71740 - 71838
Alignment:
Q  29 aggaaacatcaactgtgaa-tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  71740 aggaagcatcaactgtgaaattttggtgtgtagaatgcactgtgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaa 71838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 10470 - 10367
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  10470 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 10371  T
Q  120 ttgg 123  Q
    ||||    
T  10370 ttgg 10367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 7486 - 7580
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  7486 aggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 7580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 49479 - 49373
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| | |||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  49479 ggaaaaacacaggaagcgtcaactgtgaatttcggtgtattgaaagcactgtgtgagttctctatttatagagaaagttcacaactaataagtgagaaac 49380  T
Q  119 tttggga 125  Q
    |||||||    
T  49379 tttggga 49373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 149155 - 149261
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||| ||||| | |||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  149155 ggaaaaacacaggaagcgtcaactgtgaatttcggtgtattgaaagcactgtgtgagttctctatttatagagaaagttcacaactaataagtgagaaac 149254  T
Q  119 tttggga 125  Q
    |||||||    
T  149255 tttggga 149261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 10904 - 10817
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  10904 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 10817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 32063 - 31976
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  32063 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 31976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 13490 - 13403
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  13490 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 13403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 24791 - 24684
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  24791 ggaaaagcacaggaatcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataagtgagaaac 24692  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  24691 tttgggaa 24684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 21464 - 21377
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  21464 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 21377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 127003 - 127106
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  127003 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 127102  T
Q  120 ttgg 123  Q
    ||||    
T  127103 ttgg 127106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 35199 - 35093
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||| ||||||||||||| || |    
T  35199 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgacaagc 35100  T
Q  119 tttggga 125  Q
    |||||||    
T  35099 tttggga 35093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 466 - 570
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| ||||| |||||||||||||||||||| |   ||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  466 gaaaaacacaggaagcatcaactgtgaatttcggtatccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaact 565  T
Q  120 ttggg 124  Q
    |||||    
T  566 ttggg 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 12447 - 12359
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  12447 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 12359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 14956 - 14868
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  14956 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 14868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 725 - 629
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 125  Q
    ||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||    
T  725 aggaagcatcaactgtgaatttcggtgtattgaaagcactgtgtgagctctctatatgtagagaaagttcataactaataagtgagaaactttggga 629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 81157 - 81264
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||| |||  |||||||| |||||||||    
T  81157 ggaaaagcacaggaatcatcaactgtgaatttcggggtgttgaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaac 81256  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  81257 tttgggaa 81264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 64775 - 64866
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||||| |||| | | ||| ||||||||| ||||||||||||||||| |||  |||||||| |||||||||||||||||    
T  64775 catcaactgtgaatttcggggtgttgtacgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaactttgggaa 64866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 21907 - 22010
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    |||||||| ||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| | || | |||| ||||||||||||||    
T  21907 gaaaaacacaggaagcatcaactgtgaatttcagtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaacttataagtgagaaact 22006  T
Q  120 ttgg 123  Q
    ||||    
T  22007 ttgg 22010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 193762 - 193655
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||||||   ||||||| ||||||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  193762 ggaaaagcacaggaagcatcaactgtgaatttcggtgtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaac 193663  T
Q  119 tttgggaa 126  Q
    ||||||||    
T  193662 tttgggaa 193655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 188075 - 187972
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| ||||||||||| ||||||| ||   ||||||| ||||||| | || |||||||||||||| |||| |||| ||| ||||||||||    
T  188075 gaaaagcacaggaagcatcaactgtgtatttcggggtcctgaatgcattgtgtgaaccctatatttatagagaaacttcacaactgataggtgagaaact 187976  T
Q  120 ttgg 123  Q
    ||||    
T  187975 ttgg 187972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 1104 - 1186
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  1104 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 59025 - 59131
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| |||||| | ||||||||||||| ||||| ||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  59025 ggaaaagcacaggaagcatcaattatgaatttcggtgtatggaaagcattatgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 59124  T
Q  119 tttggga 125  Q
    |||||||    
T  59125 tttggga 59131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 63284 - 63333
Alignment:
Q  76 ctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 125  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  63284 ctctctatttatagagaaagttcacaactaataagtgagaaactttggga 63333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 19707 - 19610
Alignment:
Q  29 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||| ||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  19707 aggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaactttaggaa 19610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 3842 - 3735
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  3842 ggaaaagcacaggaagcatcaactgtgaatttcggggttcagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaac 3743  T
Q  119 tttgggaa 126  Q
    ||| ||||    
T  3742 tttaggaa 3735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 35489 - 35402
Alignment:
Q  36 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||   || | |||||||||||||||||||||||    
T  35489 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagattgtttacaactaataagtgagaaactttgg 35402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 5375 - 5273
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| |||||||||||||||||||||||| | |||||||||||||| ||||||||||||| || | || | |||||||||||||||||||    
T  5375 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtaggatgcactgtgtgagttctctatttatagggatagtttacaactaataagtgagaaact 5276  T
Q  120 ttg 122  Q
    |||    
T  5275 ttg 5273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 7003 - 7091
Alignment:
Q  35 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 123  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| | || | ||||||||||| |||||||||||    
T  7003 catcaactatgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagttagaaactttgg 7091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 5831 - 5877
Alignment:
Q  124 gaatttgtgtttagtctttttacttaatttccacacatgttccaaca 170  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  5831 gaatttgtgtttagtattttaactcaatttccacacatgttccaaca 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 7767 - 7870
Alignment:
Q  20 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 119  Q
    ||||| || ||||| ||| || |||||||||| |||||| |||||||||||||||| |||||||||||||||| | || | |||||||||| ||||||||    
T  7767 gaaaatcacaggaagcataaattgtgaatttctgtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagcgagaaact 7866  T
Q  120 ttgg 123  Q
    ||||    
T  7867 ttgg 7870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 256444 - 256518
Alignment:
Q  52 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    |||||||| |||||||| |||||  ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  256444 ggtgtgtgaaatgcactatgtgatttctctatttatagagaatattcacaactaataagtgagaaactttgggaa 256518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 257801 - 257838
Alignment:
Q  124 gaatttgtgtttagtctttttacttaatttccacacat 161  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  257801 gaatttgtgtttagtcttttaactcaatttccacacat 257838  T

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Target: scaffold0004 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 199791 - 199894
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 118  Q
    |||||| || ||||| ||||||||||||||||||||     ||||||| ||||||||||||||||||||||||||| |||  |||||||| |||||||||    
T  199791 ggaaaagcacaggaatcatcaactgtgaatttcggtcca--gaatgcattgtgtgagctctctatttatagagaaacttcgcaactaataggtgagaaac 199888  T
Q  119 tttggg 124  Q
     |||||    
T  199889 attggg 199894  T

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Target: scaffold0932 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 1105 - 1027
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||| |||  |||| ||  |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  1105 tttcggtgtgtggaatgaactacgtgatctacctatttatagagaaaaatcataactaatatgtgagaaactttgggaa 1027  T

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Target: scaffold0478 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 8215 - 8293
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||| |||  |||| ||  |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  8215 tttcggtgtgtggaatgaactaggtgatctacctatttatagagaaaaatcataactaatatgtgagaaactttgggaa 8293  T

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Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 22320 - 22372
Alignment:
Q  31 gaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctat 83  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  22320 gaaaaatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctat 22372  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 22274 - 22337
Alignment:
Q  19 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctcta 82  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| |||||||||||||||    
T  22274 ggaaaaccacaggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctcta 22337  T

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Target: scaffold0720 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 6017 - 5939
Alignment:
Q  48 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 126  Q
    ||||||||||||||||| |||  || | ||  ||||||||||||||||  || |||||||| |||||||||||| ||||    
T  6017 tttcggtgtgtggaatgaactacgtaatctacctatttatagagaaaaagcacaactaatatgtgagaaactttcggaa 5939  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 84074 - 84120
Alignment:
Q  125 aatttgtgtttagtctttttactt-aatttccacacatgttccaaca 170  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||    
T  84074 aatttgtgtttagtctttttaatccaatttccacacatgttccaaca 84120  T

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Target: scaffold0232 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 22583 - 22644
Alignment:
Q  53 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgag 114  Q
    |||||| |||||||||||| ||| ||||||||||||| || | || | ||||||||||||||    
T  22583 gtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaataagtgag 22644  T

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