View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18240_high_1 (Length: 1091)
Name: NF18240_high_1
Description: NF18240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18240_high_1 |
 | |
|
| [»] chr3 (15 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 839; Significance: 0; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 839; E-Value: 0
Query Start/End: Original strand, 182 - 1091
Target Start/End: Complemental strand, 35928787 - 35927879
Alignment:
| Q |
182 |
ccttgaaaacacaacatgacatcagaagaaatgatataatatttctatcaaaatatagaaaggaatgatatattattagttaatattttgattgatgaca |
281 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35928787 |
ccttgaaaacacaacatgacatcagaagaaatgatatattatttctatcaaaataaagaaaggaatgatatattattagttaatattttgattgatgaca |
35928688 |
T |
|
| Q |
282 |
taacttgattttcatagtagtcaaacatggtagggtagcacatttttacataagaacaaaatattattttcatattgaaaatgaaagaacatagtgcaac |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
35928687 |
taacttgattttcatagtagtcaaacatggtagggtagcacatttttacataagaacaaaatattatttttatattgaaaatgaaagaacatagtgaaac |
35928588 |
T |
|
| Q |
382 |
ctggttattaatttattttgagcatcatgatctaaacttacctcttgatgaaatgattttgatcatggttagaaaaacctcaagaaatcttttacgaatt |
481 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
35928587 |
ctggttattaatttattttgagcatcatgatctaaacttacctcttgatgaaatgattttgatcatggttagaaaaacctcgagaaatcttttacgaatt |
35928488 |
T |
|
| Q |
482 |
tacaattacgagtcataaaaacgaactacctcacatgaatactcctccttttatagtgaactcttatgagttctggtaaactctaattaaatctagataa |
581 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
35928487 |
tacaattatgagtcataaaaacgaactacctcacatgaatactcct---tttatagtgaactcttatgagttccggtaaactctaattaaatctagataa |
35928391 |
T |
|
| Q |
582 |
acatttgattttacta--gcaagttaacgagttgagtggacaaaagataaacaaatttacctaactctcgagtttgacagctttgattctgacaacataa |
679 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35928390 |
acatttgattttactatagcaagttaaagagttgagtcgaccaaagataaacaaatttacctaactctcgagtttgacagctttgattctgacaacataa |
35928291 |
T |
|
| Q |
680 |
tgtttgaaacttacaggacctggctgttcctcactggggtatggagcctttcaggagctaggacccttcagaatcaactctgacggcaaaacactatacc |
779 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
35928290 |
tgtttgaaacttacaggacctggctgttcctcactggggtatggagcctttcaggagctaggacccttcagaatcaactctgatggcaaaacactatacc |
35928191 |
T |
|
| Q |
780 |
gtaacccatatgcttggactgaaggtgaaacaatcatcgatagaatgaaattgtttcttatgatgcatttattcttagacatgaataacttaccagttta |
879 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35928190 |
gtaaccaatatgcttggactgaaggtgaaacaatcatcgatagaatgaaattgtttcttatgatgcatttattcttagacatgaataacttaccagttta |
35928091 |
T |
|
| Q |
880 |
tcattatgaaatatgcagttgcaaatgtactattcttagagtctccagcaggagtgggattttcctattcaaacacaacttctgactatgacaagtcagg |
979 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35928090 |
tcattatgaaatatgcagttgcaaatgtactattcttagagtctccagcaggagtgggattttcctattcaaacacaacttctgactatgacaagtcagg |
35927991 |
T |
|
| Q |
980 |
agataaatcaactgccaaggattcttacgtcttcctaatcaactggctggagagatttccacagtacaaaacaagagctttttacatagctggagagagt |
1079 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35927990 |
agataaatcaactgccaaggattcttacgtcttcctaatcaactggctggagagatttccacagtacaaaacaagagctttttacatagctggagagagt |
35927891 |
T |
|
| Q |
1080 |
tatgctggtcat |
1091 |
Q |
| |
|
|||||||||||| |
|
|
| T |
35927890 |
tatgctggtcat |
35927879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 654 - 1091
Target Start/End: Complemental strand, 35910924 - 35910479
Alignment:
| Q |
654 |
tgacagctttgattctgacaacataatgtttgaaacttacaggacctggctgttcctcactggggtatggagcctttcaggagctaggacccttcagaat |
753 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35910924 |
tgacagctttgattctgacaacataatgtttgaaactcacaggacctggctgttcctcactggggtatggagcctttcaggagctaggacccttcagaat |
35910825 |
T |
|
| Q |
754 |
caactctgacggcaaaacactataccgtaacccatatgcttggactgaaggtgaaacaat---------catcgatagaatgaaattgtttcttatgatg |
844 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| ||| | |||||||||||||||| |
|
|
| T |
35910824 |
caactctgatggcaaaacactataccgtaacccatatgcttggaatgaaggtgaaacaatcatcatcatcatcaatataattacattgtttcttatgatg |
35910725 |
T |
|
| Q |
845 |
catttattcttagacatgaataacttacca--gtttatcattatgaaatatgcagttgcaaatgtactattcttagagtctccagcaggagtgggatttt |
942 |
Q |
| |
|
||| |||| ||||||||||| ||||||| | ||||||||||||||||||||| || || ||||| |||||||| |||||||||||||| ||||||| |
|
|
| T |
35910724 |
cat---ttctgagacatgaatatcttaccaacttatatcattatgaaatatgcagtggcgaacgtactcttcttagaatctccagcaggagtaggatttt |
35910628 |
T |
|
| Q |
943 |
cctattcaaacacaacttctgactatgacaagtcaggagataaatcaactgccaaggattcttacgtcttcctaatcaactggctggagagatttccaca |
1042 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||| || | || |||||||| ||||||||||||||||||||||||| |
|
|
| T |
35910627 |
cctactcaaacacaacatctgactatgacaaatcaggagataagtcaactgccaaagacacctatgtcttcctcgtcaactggctggagagatttccaca |
35910528 |
T |
|
| Q |
1043 |
gtacaaaacaagagctttttacatagctggagagagttatgctggtcat |
1091 |
Q |
| |
|
|||||||| |||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
35910527 |
atacaaaaccagagatttttacataactggagagagttatgctggtcat |
35910479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 670 - 1091
Target Start/End: Complemental strand, 35940685 - 35940255
Alignment:
| Q |
670 |
gacaacataatgtttgaaacttacaggacctggctgttcctcactggggtatggagcctttcaggagctaggacccttcagaatcaactctgacggcaaa |
769 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| |||||||||| || ||| |
|
|
| T |
35940685 |
gacaacataatgtttgaaccacacaggacctggctgttcttcacttgggtatggagcctttcaggagctcggacccttcagagtcaactctgatggaaaa |
35940586 |
T |
|
| Q |
770 |
acactataccgtaacccatatgcttggactgaaggtgaaacaatcatcg---------atagaatgaaattgtttctt-atgatgcatttattcttagac |
859 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| | |||||||||| ||||||||||| || |||| |
|
|
| T |
35940585 |
acactataccgtaacccatatgcttggaatgaaggtgaaacaatcatcatcatcatcaatataattacattgtttctttatgatgcattt---ctgagac |
35940489 |
T |
|
| Q |
860 |
atgaataacttaccagtttat--cattatgaaatatgcagttgcaaatgtactattcttagagtctccagcaggagtgggattttcctattcaaacacaa |
957 |
Q |
| |
|
||||||| ||||| | |||| |||||||||||||||||| || || ||||| ||||| || |||||||||||| | ||||||||||| |||||||||| |
|
|
| T |
35940488 |
atgaatatcttacaaacttatatcattatgaaatatgcagtggcgaacgtactcttcttggaatctccagcaggaataggattttcctactcaaacacaa |
35940389 |
T |
|
| Q |
958 |
cttctgactatgacaagtcaggagataaatcaactgccaaggattcttacgtcttcctaatcaactggctggagagatttccacagtacaaaacaagagc |
1057 |
Q |
| |
|
| |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35940388 |
catctgactatgacaaatcaggagataaatcaactgccaaggattcctatgtcttccttatcaactggctggagagatttccacagtacaaaacaagaga |
35940289 |
T |
|
| Q |
1058 |
tttttacatagctggagagagttatgctggtcat |
1091 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
35940288 |
tttttacataagtggagagagttatgctggtcat |
35940255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 217; E-Value: 1e-118
Query Start/End: Original strand, 644 - 1090
Target Start/End: Complemental strand, 35915361 - 35914915
Alignment:
| Q |
644 |
ctctcgagtttgacagctttgattctgacaacataatgtttgaaacttacaggacctggctgttcctcactggggtatggagcctttcaggagctaggac |
743 |
Q |
| |
|
||||||||||||| ||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||| ||||| |||| |
|
|
| T |
35915361 |
ctctcgagtttgaaagcttcgattttgacaacataatgtttgaaactcgcaggacctggttgttcctcactgggatatggagcctttcaagagctcggac |
35915262 |
T |
|
| Q |
744 |
ccttcagaatcaactctgacggcaaaacactataccgtaacccatatgcttggactgaaggtgaaacaatcatcgatagaatgaaattgtttctt-atga |
842 |
Q |
| |
|
|||||||| |||| ||||| || |||||| ||||||| |||||||||||||||| ||||||||| ||||||||| ||| || || || |||||| |||| |
|
|
| T |
35915261 |
ccttcagagtcaattctgatggaaaaacattataccgcaacccatatgcttggaatgaaggtgagacaatcatcaatataactaatttatttctttatga |
35915162 |
T |
|
| Q |
843 |
tgcatttattcttagacatgaataacttaccagtttat--cattatgaaatatgcagttgcaaatgtactattcttagagtctccagcaggagtgggatt |
940 |
Q |
| |
|
||||| || |||||||| || ||||||| |||| | |||||||||||||||||||||||||||| ||||| || ||||| |||||||| ||||| |
|
|
| T |
35915161 |
tgcatgc---ctgagacatgattatcttaccaacttatatccttatgaaatatgcagttgcaaatgtactcttcttggaatctccggcaggagtaggatt |
35915065 |
T |
|
| Q |
941 |
ttcctattcaaacacaacttctgactatgacaagtcaggagataaatcaactgccaaggattcttacgtcttcctaatcaactggctggagagatttcca |
1040 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||| ||||||||||| || || || || ||| | || || ||||| |||||||||||||||||||||||| |
|
|
| T |
35915064 |
ttcctactcaaacacaacatctgactatgacaattcaggagataagtccaccgctaaagatgcctatgttttcctcatcaactggctggagagatttcca |
35914965 |
T |
|
| Q |
1041 |
cagtacaaaacaagagctttttacatagctggagagagttatgctggtca |
1090 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
35914964 |
cagtacaaaacaagagctttttacataactggagagagttatgctggtca |
35914915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 643 - 1091
Target Start/End: Complemental strand, 35921733 - 35921286
Alignment:
| Q |
643 |
actctcgagtttgacagctttgattctgacaacataatgtttgaaacttacaggacctggctgttcctcactggggtatggagcctttcaggagctagga |
742 |
Q |
| |
|
|||||| |||||| |||||| ||| ||||| |||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||| ||| |
|
|
| T |
35921733 |
actctcaagtttgtcagcttcaattttgacatcataatgtttgaaactcacaggacctggttgttcctcactgggatatggagcctttgaggagctcgga |
35921634 |
T |
|
| Q |
743 |
cccttcagaatcaactctgacggcaaaacactataccgtaacccatatgcttggactgaaggtgaaacaatcatcgatagaatgaaattgtttcttatga |
842 |
Q |
| |
|
||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| | |||||||||| || || |||| |||||| |
|
|
| T |
35921633 |
cccttcagagtcaactctgatggcaaaacattataccgtaacccatatgcttggaatgaaggtgagatgatcatcgatataactaatgtgttatttatga |
35921534 |
T |
|
| Q |
843 |
tgcatttattcttagacatgaataacttaccagttta--tcattatgaaatatgcagttgcaaatgtactattcttagagtctccagcaggagtgggatt |
940 |
Q |
| |
|
||||||| || |||||||| || |||| | ||| || |||||||||||||||| ||||||||||| ||||| || ||||||||||| || ||||| |
|
|
| T |
35921533 |
tgcattt---ctgagacatgattatcttagaaacttaactccttatgaaatatgcagtggcaaatgtactcttcttggaatctccagcaggggtaggatt |
35921437 |
T |
|
| Q |
941 |
ttcctattcaaacacaacttctgactatgacaagtcaggagataaatcaactgccaaggattcttacgtcttcctaatcaactggctggagagatttcca |
1040 |
Q |
| |
|
|||||| ||||||||| | || ||||||||||| ||||||||||| || ||||| || ||| | || ||||||||||||||||||||||||||||||||| |
|
|
| T |
35921436 |
ttcctactcaaacacatcatcggactatgacaattcaggagataagtccactgctaaagatgcctatgtcttcctaatcaactggctggagagatttcca |
35921337 |
T |
|
| Q |
1041 |
cagtacaaaacaagagctttttacatagctggagagagttatgctggtcat |
1091 |
Q |
| |
|
||||||||||| |||| |||||||||| |||||||||||||||| |||||| |
|
|
| T |
35921336 |
cagtacaaaaccagagatttttacataactggagagagttatgccggtcat |
35921286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 582 - 1091
Target Start/End: Complemental strand, 35935205 - 35934692
Alignment:
| Q |
582 |
acatttgattttactagcaagttaacgagttgagtggacaaaagataaacaaatttaccta-actctcgagtttgacagctttgattctgacaacataat |
680 |
Q |
| |
|
|||||||||||||||| ||||| | |||| |||| ||| ||| || ||| |||||||| ||||| |||||||| | |||||| |||| |||||||| |
|
|
| T |
35935205 |
acatttgattttactaacaagtatatgagtcgagtctacagaagctacacatgtttacctagactctagagtttgaaaaatttgatgctgataacataat |
35935106 |
T |
|
| Q |
681 |
gtttgaaacttacaggacctggctgttcctcactggggtatggagcctttcaggagctaggacccttcagaatcaactctgacggcaaaacactataccg |
780 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||| || |||||| ||||||| |
|
|
| T |
35935105 |
atttgaaacacacaggacctggctgttcttcacttgggtatggagcctttgaggagctaggacccttcagagtcaactctgatggaaaaacattataccg |
35935006 |
T |
|
| Q |
781 |
taacccatatgcttggactgaaggtgaaacaatcat---cgatagaatgaaattgtttctt-atgatgcatttattcttagacatgaataacttaccagt |
876 |
Q |
| |
|
||||| ||||||||||| ||||||| |||||||| ||||| || |||| ||||| || ||||||||| ||||||||| | || |||| | |
|
|
| T |
35935005 |
taaccaatatgcttggagtgaaggtatgacaatcataatcgatatgattaaatgttttctccattatgcatttaag---agacatgaacatctaaccaat |
35934909 |
T |
|
| Q |
877 |
ttatcattatgaaatat--gcagttgcaaatgtactattcttagagtctccagcaggagtgggattttcctattcaaacacaacttctgactatgacaag |
974 |
Q |
| |
|
|||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
35934908 |
ttatcattataaaatatatgcagttgcaaatatactcttcttagagtctccagcaggagtgggattttcctactcaaacacaacttctgactataaaaaa |
35934809 |
T |
|
| Q |
975 |
tcaggagataaatcaactgccaaggattcttacgtcttcctaatcaactggctggagagatttccacagtacaaaacaagagctttttacatagctggag |
1074 |
Q |
| |
|
|||||||||| || ||||| || ||| | || || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| |
|
|
| T |
35934808 |
gcaggagataagtccactgctaaagatgcctatgttttcctaatcaactggctggagagatttccacagtacaaaaccagagatttttacataactggag |
35934709 |
T |
|
| Q |
1075 |
agagttatgctggtcat |
1091 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
35934708 |
agagttatgctggtcat |
35934692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35928964 - 35928879
Alignment:
| Q |
1 |
tttctattattttgtggagtctccgtataactcttccactaaacctttagttttgtggctcaatggaggtataaattgcctcaaac |
86 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35928964 |
tttctattattttgtggagtctccatataactcttccactaaacctttagttttgtggctcaatggaggtataaattgcctcaaac |
35928879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 35911630 - 35911552
Alignment:
| Q |
1 |
tttctattattttgtggagtctccgtataactcttccactaaacctttagttttgtggctcaatggaggtataaattgc |
79 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||| ||||||| |
|
|
| T |
35911630 |
tttctattattttgtggagtctccatataactcttccactaaacctttagtattatggctcaatggaggtaaaaattgc |
35911552 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35916017 - 35915947
Alignment:
| Q |
1 |
tttctattattttgtggagtctccgtataactcttccactaaacctttagttttgtggctcaatggaggta |
71 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
35916017 |
tttctattattttgtggagtctccatataactcttccactaaacctttagtactgtggttcaatggaggta |
35915947 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 35935597 - 35935519
Alignment:
| Q |
5 |
tattattttgtggagtctccgtataactcttccactaaacctttagttttgtggctcaatggaggtataaattgcctca |
83 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||| |||| |||||| |
|
|
| T |
35935597 |
tattattttgtggagtctccatataactcttcaactaaaccattagtattgtggctcaatggaggtaaaaatagcctca |
35935519 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35941151 - 35941076
Alignment:
| Q |
1 |
tttctattattttgtggagtctccgtataactcttccactaaacctttagttttgtggctcaatggaggtataaat |
76 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||| |||||||||||||| || |||||||||||||||| |||| |
|
|
| T |
35941151 |
tttctattattttgtggagtctccatgtaactcttctactaaacctttagtattatggctcaatggaggtaaaaat |
35941076 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35922286 - 35922216
Alignment:
| Q |
1 |
tttctattattttgtggagtctccgtataactcttccactaaacctttagttttgtggctcaatggaggta |
71 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||| |||||||| ||| | |||||||| |||||||||| |
|
|
| T |
35922286 |
tttctattattttgtggaatctccacataactcttatactaaacccttaatattgtggcttaatggaggta |
35922216 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 35915725 - 35915684
Alignment:
| Q |
268 |
tttgattgatgacataacttgattttcatagtagtcaaacat |
309 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
35915725 |
tttgattgatgacataactacattttcatagtagtgaaacat |
35915684 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 310
Target Start/End: Complemental strand, 35922085 - 35922044
Alignment:
| Q |
269 |
ttgattgatgacataacttgattttcatagtagtcaaacatg |
310 |
Q |
| |
|
|||||||||||||||| || |||||||||||||| ||||||| |
|
|
| T |
35922085 |
ttgattgatgacataagttcattttcatagtagtgaaacatg |
35922044 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 35940852 - 35940804
Alignment:
| Q |
253 |
attattagttaatattttgattgatgacataacttgattttcatagtagt |
302 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||| || ||||||||||| |
|
|
| T |
35940852 |
attatcagttaatattt-gattgatgacataacttcatattcatagtagt |
35940804 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 894 - 954
Target Start/End: Complemental strand, 6209039 - 6208979
Alignment:
| Q |
894 |
gcagttgcaaatgtactattcttagagtctccagcaggagtgggattttcctattcaaaca |
954 |
Q |
| |
|
||||| |||||||| | || |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
6209039 |
gcagtggcaaatgttatctttttagagtctccagcaggagttggattttcctattcaaaca |
6208979 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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