View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18240_high_5 (Length: 661)

Name: NF18240_high_5
Description: NF18240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18240_high_5
NF18240_high_5
[»] chr8 (12 HSPs)
chr8 (22-206)||(35699735-35699919)
chr8 (334-397)||(19429994-19430057)
chr8 (334-397)||(19435496-19435559)
chr8 (334-397)||(19566143-19566206)
chr8 (334-397)||(19571645-19571708)
chr8 (337-391)||(31030511-31030565)
chr8 (334-397)||(33616779-33616842)
chr8 (342-397)||(13584338-13584393)
chr8 (351-390)||(40125945-40125984)
chr8 (344-390)||(32015690-32015736)
chr8 (22-51)||(3867691-3867720)
chr8 (19-51)||(30595429-30595461)
[»] chr1 (16 HSPs)
chr1 (302-397)||(5602477-5602572)
chr1 (298-397)||(39747217-39747317)
chr1 (303-397)||(19422930-19423025)
chr1 (334-397)||(26651218-26651281)
chr1 (334-397)||(38734255-38734318)
chr1 (346-397)||(10106095-10106146)
chr1 (303-397)||(14582049-14582142)
chr1 (344-397)||(36684767-36684820)
chr1 (351-390)||(11806355-11806394)
chr1 (346-397)||(13890805-13890856)
chr1 (351-390)||(38620689-38620728)
chr1 (344-397)||(11251165-11251218)
chr1 (344-397)||(27716433-27716486)
chr1 (344-397)||(34318276-34318329)
chr1 (344-397)||(37404468-37404521)
chr1 (344-397)||(37409589-37409642)
[»] chr2 (12 HSPs)
chr2 (302-397)||(42914590-42914685)
chr2 (319-397)||(5089243-5089321)
chr2 (344-397)||(42723503-42723556)
chr2 (344-397)||(42728672-42728725)
chr2 (344-397)||(44096292-44096345)
chr2 (344-397)||(44754648-44754701)
chr2 (344-397)||(44759814-44759867)
chr2 (351-390)||(30650925-30650964)
chr2 (351-397)||(20711441-20711487)
chr2 (351-388)||(12796921-12796958)
chr2 (351-388)||(19578476-19578513)
chr2 (344-397)||(40518524-40518577)
[»] chr3 (19 HSPs)
chr3 (316-390)||(26962021-26962095)
chr3 (316-397)||(33089395-33089476)
chr3 (334-397)||(53119507-53119570)
chr3 (336-397)||(20810354-20810415)
chr3 (344-397)||(15763082-15763135)
chr3 (344-397)||(20090714-20090767)
chr3 (344-397)||(20095839-20095892)
chr3 (337-390)||(38437050-38437103)
chr3 (351-390)||(758428-758467)
chr3 (338-397)||(13022011-13022070)
chr3 (351-390)||(20520048-20520087)
chr3 (343-397)||(3476998-3477052)
chr3 (344-397)||(15768243-15768296)
chr3 (344-397)||(17364053-17364106)
chr3 (344-397)||(17368709-17368762)
chr3 (344-397)||(27605188-27605241)
chr3 (344-397)||(30341896-30341949)
chr3 (344-397)||(34129221-34129274)
chr3 (353-397)||(25726846-25726890)
[»] chr7 (18 HSPs)
chr7 (319-397)||(9973427-9973505)
chr7 (334-388)||(24528334-24528388)
chr7 (344-397)||(33243169-33243222)
chr7 (334-397)||(28292555-28292617)
chr7 (334-397)||(33226394-33226457)
chr7 (344-397)||(33237992-33238045)
chr7 (344-397)||(47998965-47999018)
chr7 (351-390)||(13314296-13314335)
chr7 (343-397)||(47177171-47177225)
chr7 (345-390)||(8076040-8076085)
chr7 (344-397)||(16539464-16539517)
chr7 (344-397)||(16626145-16626198)
chr7 (344-397)||(21081093-21081146)
chr7 (353-390)||(23246993-23247030)
chr7 (344-397)||(32212706-32212759)
chr7 (344-397)||(42571935-42571988)
chr7 (344-397)||(47993790-47993843)
chr7 (351-391)||(3357691-3357731)
[»] chr6 (21 HSPs)
chr6 (303-397)||(19478097-19478191)
chr6 (303-397)||(31476067-31476161)
chr6 (303-397)||(13605144-13605239)
chr6 (336-397)||(3901894-3901955)
chr6 (300-397)||(31495893-31495990)
chr6 (300-397)||(31501279-31501376)
chr6 (300-397)||(31515783-31515880)
chr6 (344-397)||(22698295-22698348)
chr6 (316-364)||(17290148-17290196)
chr6 (351-390)||(2700166-2700205)
chr6 (338-397)||(17281616-17281675)
chr6 (351-397)||(12183053-12183099)
chr6 (351-389)||(19674309-19674347)
chr6 (343-397)||(31981549-31981603)
chr6 (344-389)||(5740851-5740896)
chr6 (22-51)||(9082167-9082196)
chr6 (344-397)||(21396689-21396742)
chr6 (344-397)||(21401745-21401798)
chr6 (344-397)||(24191435-24191488)
chr6 (344-397)||(24192532-24192585)
chr6 (316-388)||(29325496-29325569)
[»] scaffold0132 (2 HSPs)
scaffold0132 (316-390)||(2831-2905)
scaffold0132 (316-390)||(10791-10865)
[»] chr4 (25 HSPs)
chr4 (323-397)||(10120861-10120935)
chr4 (345-391)||(24490022-24490068)
chr4 (344-397)||(13695149-13695202)
chr4 (344-397)||(36359284-36359337)
chr4 (344-397)||(39999059-39999112)
chr4 (344-397)||(40004017-40004070)
chr4 (344-397)||(54343193-54343246)
chr4 (344-397)||(54348347-54348400)
chr4 (346-397)||(653035-653086)
chr4 (345-388)||(5928281-5928324)
chr4 (351-390)||(42758815-42758854)
chr4 (316-389)||(8083088-8083162)
chr4 (344-397)||(8980337-8980390)
chr4 (344-397)||(8985457-8985510)
chr4 (344-397)||(13700500-13700553)
chr4 (344-397)||(21299885-21299938)
chr4 (344-397)||(36354166-36354219)
chr4 (344-397)||(41393235-41393288)
chr4 (344-397)||(51019425-51019478)
chr4 (344-397)||(53797619-53797672)
chr4 (344-397)||(54991476-54991529)
chr4 (353-389)||(6070585-6070621)
chr4 (343-383)||(10318846-10318886)
chr4 (351-383)||(32082157-32082189)
chr4 (19-51)||(44833917-44833949)
[»] scaffold0011 (2 HSPs)
scaffold0011 (316-397)||(1527-1608)
scaffold0011 (309-397)||(7001-7089)
[»] chr5 (12 HSPs)
chr5 (346-397)||(14374127-14374178)
chr5 (344-397)||(24771409-24771462)
chr5 (349-397)||(7805066-7805114)
chr5 (346-397)||(13582742-13582793)
chr5 (351-390)||(20181123-20181162)
chr5 (346-397)||(24435921-24435972)
chr5 (22-55)||(11672327-11672360)
chr5 (344-397)||(17510048-17510101)
chr5 (344-397)||(26709092-26709145)
chr5 (344-397)||(26978826-26978879)
chr5 (344-397)||(36253816-36253869)
chr5 (344-397)||(42019563-42019616)
[»] scaffold0067 (1 HSPs)
scaffold0067 (343-397)||(34021-34075)
[»] scaffold0055 (1 HSPs)
scaffold0055 (344-397)||(3048-3101)
[»] scaffold0052 (1 HSPs)
scaffold0052 (344-397)||(81434-81487)
[»] scaffold0166 (1 HSPs)
scaffold0166 (343-397)||(13792-13846)
[»] scaffold0097 (1 HSPs)
scaffold0097 (351-397)||(15280-15326)
[»] scaffold0594 (1 HSPs)
scaffold0594 (344-397)||(9260-9313)
[»] scaffold0517 (1 HSPs)
scaffold0517 (344-397)||(3553-3606)
[»] scaffold0014 (1 HSPs)
scaffold0014 (344-397)||(31535-31588)


Alignment Details
Target: chr8 (Bit Score: 173; Significance: 1e-92; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 22 - 206
Target Start/End: Original strand, 35699735 - 35699919
Alignment:
Q  22 ttttcatcccgaaccgaaccatgcccacccttacctacaacatcaacgatctctaacaattgtcggtttcttccattgaaactatctattcgtaatgact 121  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35699735 ttttcatcccgaaccgaaccatgcccacccctacctacaacatcaacgatctctaacaattgtcggtttcctccattgaaactatctattcgtaatgact 35699834  T
Q  122 ttgttgatgctccccagaccccaatgactattgcaacaaccatataaatacatgatttcactataaagtaaggtacacaatcttt 206  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35699835 ttgttgatgctccccagaccccaatgactattgccacaaccatataaatacatgatttcactataaagtaaggtacacaatcttt 35699919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 19429994 - 19430057
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  19429994 tgccaaaggaattaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 19430057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 19435496 - 19435559
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  19435496 tgccaaaggaattaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 19435559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 19566143 - 19566206
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  19566143 tgccaaaggaattaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 19566206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 19571645 - 19571708
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  19571645 tgccaaaggaattaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 19571708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 337 - 391
Target Start/End: Original strand, 31030511 - 31030565
Alignment:
Q  337 caaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgc 391  Q
    ||||||||||| ||||||||||||||||||| || |||||||||||| |||||||    
T  31030511 caaaggaattatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgc 31030565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 33616842 - 33616779
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||| |||||| ||| ||||||||||||||| || |||||||||||| ||||||| |||||    
T  33616842 tgccaaaagaattatcggattgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 33616779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 13584338 - 13584393
Alignment:
Q  342 gaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||| |||||| |||||||||| || |||||||||||| ||||||| |||||    
T  13584338 gaattaccaggttgaatcacgaccaggtcgctctctttaagacgtttcgcggcact 13584393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Complemental strand, 40125984 - 40125945
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  40125984 ggttgagtcacgaccagatcgctctctttaagacgtttcg 40125945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 344 - 390
Target Start/End: Original strand, 32015690 - 32015736
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||    
T  32015690 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcg 32015736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 3867691 - 3867720
Alignment:
Q  22 ttttcatcccgaaccgaaccatgcccaccc 51  Q
    ||||||||||||||||||||||||||||||    
T  3867691 ttttcatcccgaaccgaaccatgcccaccc 3867720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 30595461 - 30595429
Alignment:
Q  19 caattttcatcccgaaccgaaccatgcccaccc 51  Q
    ||||||||||||||||| |||||||||||||||    
T  30595461 caattttcatcccgaactgaaccatgcccaccc 30595429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 5e-30; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 302 - 397
Target Start/End: Complemental strand, 5602572 - 5602477
Alignment:
Q  302 ctgttagttttgtgtttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||||||  |||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  5602572 ctgttagttttgaatttaaaaatcagaagtactgccaaaggaattaccgggttgagtcacgaccagatcgctctctttaagacgtttcgctgcact 5602477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 298 - 397
Target Start/End: Complemental strand, 39747317 - 39747217
Alignment:
Q  298 tgttctgttagttttgtgtttaaaaa-tcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcac 396  Q
    |||| |||||||||||  |||||||| |||||| || |||||||||||||| ||||||||||||||||||| |  |||||||||||| ||||||| ||||    
T  39747317 tgttgtgttagttttgaatttaaaaaatcagaagtagtgccaaaggaattatcgggttgagtcacgaccaggttgctctctttaagacgtttcgcggcac 39747218  T
Q  397 t 397  Q
    |    
T  39747217 t 39747217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 397
Target Start/End: Complemental strand, 19423025 - 19422930
Alignment:
Q  303 tgttagttttgtgtttaaaaa-tcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||  |||||||| |||||| || || |||||||||||| |||||||||||||| |||||| |||||||||||| ||||||| |||||    
T  19423025 tgttagttttgaatttaaaaaatcagaagtactggcaaaggaattactgggttgagtcacgatcagatcgctctctttaagacgtttcgctgcact 19422930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 26651281 - 26651218
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || |||||    
T  26651281 tgccaaaggaattatcgggttgagtcacgaccaggtcactctctttaagatgttttgcggcact 26651218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 38734255 - 38734318
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||| ||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  38734255 tgccaaaggaattatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 38734318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 10106095 - 10106146
Alignment:
Q  346 taccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  10106095 taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 10106146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 397
Target Start/End: Original strand, 14582049 - 14582142
Alignment:
Q  303 tgttagttttgtgtttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||  |||| | ||||||| || ||| |||||||||| |||||||||| |||| ||| || |||||||||||| ||||||| |||||    
T  14582049 tgttagttttgaatttagatatcagaaatactgc-aaaggaattatcgggttgagttacgatcaggtcgctctctttaagaagtttcgcggcact 14582142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 36684820 - 36684767
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  36684820 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 36684767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 11806355 - 11806394
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  11806355 ggttgagtcacaaccagatcgctctctttaagatgtttcg 11806394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 13890805 - 13890856
Alignment:
Q  346 taccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||||||||| || |||||||||||| |||| || |||||    
T  13890805 taccgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcact 13890856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 38620689 - 38620728
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  38620689 ggttgagtcgcgaccagatcactctctttaagacgtttcg 38620728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 11251218 - 11251165
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  11251218 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 11251165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 27716433 - 27716486
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  27716433 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 27716486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 34318329 - 34318276
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||  || |||||||||||| ||||||| |||||    
T  34318329 attaccgggatgagtcacgaccaagtcgctctctttaagacgtttcgcggcact 34318276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 37404521 - 37404468
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  37404521 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 37404468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 37409642 - 37409589
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  37409642 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 37409589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 302 - 397
Target Start/End: Original strand, 42914590 - 42914685
Alignment:
Q  302 ctgttagttttgtgtttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||||||  |||||||||||||| || |||||||||||||| ||||||||||||||||||| ||  ||||||||||| ||||||| |||||    
T  42914590 ctgttagttttgaatttaaaaatcagaagtactgccaaaggaattagcgggttgagtcacgaccaggtcgttctctttaagacgtttcgcggcact 42914685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 5089243 - 5089321
Alignment:
Q  319 aaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||| || ||||| ||||||||||| ||| |||||||| |||||| || |||||||||||| ||||||| |||||    
T  5089243 aaaaatcaaaagtattgtcaaaggaattatcggattgagtcatgaccaggtcgctctctttaagacgtttcgcggcact 5089321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 42723556 - 42723503
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  42723556 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 42723503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 42728725 - 42728672
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  42728725 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 42728672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 44096292 - 44096345
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  44096292 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 44096345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 44754701 - 44754648
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  44754701 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 44754648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 44759867 - 44759814
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  44759867 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 44759814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 30650925 - 30650964
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  30650925 ggttgagtcacgaccagatcgctctctttaagacgtttcg 30650964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 397
Target Start/End: Original strand, 20711441 - 20711487
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||| |||||||  |||||||||||||| ||||||    
T  20711441 ggttgagtcacgaccatatcactccttttaagatgtttcgtagcact 20711487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 12796921 - 12796958
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgttt 388  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  12796921 ggttgagtcacgaccagatcgctctctttaagacgttt 12796958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 388
Target Start/End: Complemental strand, 19578513 - 19578476
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgttt 388  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  19578513 ggttgagtcacgaccagatcgctctctttaagacgttt 19578476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 40518577 - 40518524
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  40518577 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 40518524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 316 - 390
Target Start/End: Original strand, 26962021 - 26962095
Alignment:
Q  316 tttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  26962021 tttaaaaatcagaactactaccaaaggaattactgggttgagtcacgaccagatcgctctctttaagacgtttcg 26962095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 316 - 397
Target Start/End: Complemental strand, 33089476 - 33089395
Alignment:
Q  316 tttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||| |||||| || || |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  33089476 tttagaaatcaaaaatactgccaaaggaattaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 33089395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 53119507 - 53119570
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||| ||||||| |||||    
T  53119507 tgccaaaggaattaccgggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcact 53119570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 20810354 - 20810415
Alignment:
Q  336 ccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||| ||||||||||||||||||| ||  ||||||||||| |||||||||||||    
T  20810354 ccaaaggaattatcgggttgagtcacgaccaggtcgttctctttaagacgtttcgcagcact 20810415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 15763135 - 15763082
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  15763135 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 15763082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 20090767 - 20090714
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  20090767 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 20090714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 20095892 - 20095839
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  20095892 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 20095839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 390
Target Start/End: Complemental strand, 38437103 - 38437050
Alignment:
Q  337 caaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    ||||| ||||||||||||||||||||| ||| ||||| ||||||||| ||||||    
T  38437103 caaagaaattaccgggttgagtcacgatcaggtcactttctttaagacgtttcg 38437050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Complemental strand, 758467 - 758428
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  758467 ggttgagtcacgaccagatcgctctctttaagacgtttcg 758428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 13022011 - 13022070
Alignment:
Q  338 aaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||| ||||||||||||||||||| || |||| ||||| | ||||||| |||||    
T  13022011 aaaggaattatcgggttgagtcacgaccaggtcgctctttttaaaacgtttcgcggcact 13022070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 20520048 - 20520087
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  20520048 ggttgagtcacgaccaggtcactctctttaagacgtttcg 20520087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 3477052 - 3476998
Alignment:
Q  343 aattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  3477052 aattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 3476998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 15768296 - 15768243
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||| ||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  15768296 attactgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 15768243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 17364053 - 17364106
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  17364053 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 17364106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 17368709 - 17368762
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  17368709 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 17368762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 27605241 - 27605188
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||| ||||||||||||||||  || ||||||||||||  ||||||||||||    
T  27605241 attaccaggttgagtcacgaccaagtcgctctctttaagacatttcgcagcact 27605188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 30341949 - 30341896
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||| |||| |||||||||||||| ||||| ||||||||| ||||||| |||||    
T  30341949 attatcggggtgagtcacgaccaggtcactttctttaagacgtttcgcggcact 30341896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 34129274 - 34129221
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  34129274 attaccgggctgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 34129221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 353 - 397
Target Start/End: Complemental strand, 25726890 - 25726846
Alignment:
Q  353 ttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||||||||| || |||||||||||| ||||||| |||||    
T  25726890 ttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 25726846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 7e-20; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 9973427 - 9973505
Alignment:
Q  319 aaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||| || || ||||||||| ||||||| |||||    
T  9973427 aaaaatcagaagtattgtcaaaggaattaccgggttgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 9973505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 388
Target Start/End: Original strand, 24528334 - 24528388
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgttt 388  Q
    |||||||||||||| ||||||||||||||||||| || |||||||||||| ||||    
T  24528334 tgccaaaggaattatcgggttgagtcacgaccaggtcgctctctttaagacgttt 24528388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 33243169 - 33243222
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||| |||||    
T  33243169 attaccgggatgagtcacgaccaggtcactctctttaagacgtttcgcggcact 33243222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 28292617 - 28292555
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||||||||||||||| |||||||||||| || |||| ||||||| ||||||| |||||    
T  28292617 tgccaaaggaattaccgggttaagtcacgaccaggtcgctct-tttaagacgtttcgcggcact 28292555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 33226394 - 33226457
Alignment:
Q  334 tgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||| || ||| |||||||||||| || |||||||||||| ||||||| |||||    
T  33226394 tgccaaaggaattatcgcgttaagtcacgaccaggtcgctctctttaagacgtttcgcggcact 33226457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 33237992 - 33238045
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  33237992 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 33238045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 47998965 - 47999018
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  47998965 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 47999018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Complemental strand, 13314335 - 13314296
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  13314335 ggttgagtcacgaccagatcgctctctttaagacgtttcg 13314296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 47177225 - 47177171
Alignment:
Q  343 aattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  47177225 aattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 47177171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 8076040 - 8076085
Alignment:
Q  345 ttaccgggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    |||| |||||||||||||||||| || |||||||||||| ||||||    
T  8076040 ttactgggttgagtcacgaccaggtcgctctctttaagacgtttcg 8076085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 16539517 - 16539464
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  16539517 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 16539464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 16626145 - 16626198
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  16626145 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 16626198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 21081146 - 21081093
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  21081146 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 21081093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 23247030 - 23246993
Alignment:
Q  353 ttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    ||||||||||||||| || |||||||||||||||||||    
T  23247030 ttgagtcacgaccaggtcgctctctttaagatgtttcg 23246993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 32212759 - 32212706
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  32212759 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 32212706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 42571935 - 42571988
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  42571935 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 42571988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 47993790 - 47993843
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||| ||||| || |||||||||||| ||||||| |||||    
T  47993790 attaccgggatgagtcacaaccaggtcgctctctttaagacgtttcgcggcact 47993843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 351 - 391
Target Start/End: Complemental strand, 3357731 - 3357691
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcgc 391  Q
    ||||||||||||||||| || |||||||||||| |||||||    
T  3357731 ggttgagtcacgaccaggtcgctctctttaagacgtttcgc 3357691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 7e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 303 - 397
Target Start/End: Original strand, 19478097 - 19478191
Alignment:
Q  303 tgttagttttgtgtttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||  |||| |||| |||| || || ||||||||||||||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  19478097 tgttagttttgaatttagaaattagaaatactgtcaaaggaattaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 19478191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 303 - 397
Target Start/End: Complemental strand, 31476161 - 31476067
Alignment:
Q  303 tgttagttttgtgtttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||| |||||||||||||||||||||| | ||| |||||||||| ||||||||||||||| ||| |  ||| ||||||||||||| || |||||    
T  31476161 tgttatttttgtgtttaaaaatcagaaccactgctaaaggaattatcgggttgagtcacgatcaggttgctcactttaagatgtttggcggcact 31476067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 397
Target Start/End: Complemental strand, 13605239 - 13605144
Alignment:
Q  303 tgttagttttgtgtttaaaaa-tcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||  |||||||| |||||| || || |||||||||||||||||||||||||||| || |  |||||||||||| ||||||| |||||    
T  13605239 tgttagttttgaatttaaaaaatcagaagtactgtcaaaggaattaccgggttgagtcacgactaggttgctctctttaagacgtttcgcggcact 13605144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 3901894 - 3901955
Alignment:
Q  336 ccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| |||| || |||||    
T  3901894 ccaaaggaattaccgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcact 3901955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 397
Target Start/End: Complemental strand, 31495990 - 31495893
Alignment:
Q  300 ttctgttagttttgtgtttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||| |||||||||||||||||||||| | | | |||||||||| ||||||||||||||| ||| |  ||| |||||| |||||| || |||||    
T  31495990 ttctgttatttttgtgtttaaaaatcagaaccactactaaaggaattatcgggttgagtcacgatcaggttgctcactttaacatgtttggcggcact 31495893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 397
Target Start/End: Complemental strand, 31501376 - 31501279
Alignment:
Q  300 ttctgttagttttgtgtttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||| |||||||||||||||||||||| | | | |||||||||| ||||||||||||||| ||| |  ||| |||||| |||||| || |||||    
T  31501376 ttctgttatttttgtgtttaaaaatcagaaccactactaaaggaattatcgggttgagtcacgatcaggttgctcactttaacatgtttggcggcact 31501279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 300 - 397
Target Start/End: Complemental strand, 31515880 - 31515783
Alignment:
Q  300 ttctgttagttttgtgtttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||| |||||||||||||||||||||| | | | |||||||||| | ||||||||||||| ||| |  ||| |||||| |||||| || |||||    
T  31515880 ttctgttatttttgtgtttaaaaatcagaaccactactaaaggaattatcaggttgagtcacgatcaggttgctcactttaacatgtttggcggcact 31515783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 22698348 - 22698295
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  22698348 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 22698295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 17290196 - 17290148
Alignment:
Q  316 tttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgac 364  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||||||    
T  17290196 tttaaaaatcggaactactaccaaaggaattaccgggttaagtcacgac 17290148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Complemental strand, 2700205 - 2700166
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  2700205 ggttgagtcacgaccagatcgctctctttaagacgtttcg 2700166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 17281675 - 17281616
Alignment:
Q  338 aaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||||||||||||| ||  || || ||||||||| ||||||| |||||    
T  17281675 aaaggaattaccgggttgagtcacgagcatgtcgctttctttaagacgtttcgcggcact 17281616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 12183099 - 12183053
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||||||||||| || |||||||||||| ||||||| |||||    
T  12183099 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 12183053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 389
Target Start/End: Original strand, 19674309 - 19674347
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttc 389  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  19674309 ggttgagtcacgaccaggtcactctctttaagacgtttc 19674347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 31981549 - 31981603
Alignment:
Q  343 aattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  31981549 aattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 31981603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 5740896 - 5740851
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttc 389  Q
    ||||||||||||||||| ||| || ||||||||||||||| |||||    
T  5740896 attaccgggttgagtcatgactaggtcactctctttaagacgtttc 5740851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 9082167 - 9082196
Alignment:
Q  22 ttttcatcccgaaccgaaccatgcccaccc 51  Q
    ||||||||||||||||||||||||||||||    
T  9082167 ttttcatcccgaaccgaaccatgcccaccc 9082196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 21396689 - 21396742
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  21396689 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 21396742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 21401745 - 21401798
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  21401745 attaccgggatgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 21401798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 24191488 - 24191435
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  24191488 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 24191435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 24192585 - 24192532
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  24192585 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 24192532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 29325496 - 29325569
Alignment:
Q  316 tttaaaaatcagaa-ctattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgttt 388  Q
    |||||||||||||| ||| | |||||| ||||||||||||||||||||| ||  || |||| ||||||| ||||    
T  29325496 tttaaaaatcagaaactactaccaaagtaattaccgggttgagtcacgatcaagtcgctctttttaagacgttt 29325569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 2905 - 2831
Alignment:
Q  316 tttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    |||| ||||||||| || ||| |||||||||||||||||||||||||||||| || | |||||||||| ||||||    
T  2905 tttagaaatcagaaatactgcaaaaggaattaccgggttgagtcacgaccaggtcgcgctctttaagacgtttcg 2831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 10865 - 10791
Alignment:
Q  316 tttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    |||| ||||||||| || ||| |||||||||||||||||||||||||||||| || | |||||||||| ||||||    
T  10865 tttagaaatcagaaatactgcaaaaggaattaccgggttgagtcacgaccaggtcgcgctctttaagacgtttcg 10791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 10120935 - 10120861
Alignment:
Q  323 atcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||| || || ||||||||||||| ||||||||||||| ||| || |||||||||||| ||||||| |||||    
T  10120935 atcagaagtactgtcaaaggaattaccaggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcact 10120861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 24490022 - 24490068
Alignment:
Q  345 ttaccgggttgagtcacgaccagatcactctctttaagatgtttcgc 391  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||    
T  24490022 ttaccgggttgagtcacgaccagatcgctctctttaagacgtttcgc 24490068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 13695149 - 13695202
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||||||||||| |||||    
T  13695149 attaccggggtgagtcacgaccaggtcgctttctttaagatgtttcgcggcact 13695202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 36359284 - 36359337
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  36359284 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 36359337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 39999059 - 39999112
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  39999059 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 39999112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 40004017 - 40004070
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  40004017 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 40004070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 54343193 - 54343246
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  54343193 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 54343246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 54348347 - 54348400
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  54348347 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 54348400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 653035 - 653086
Alignment:
Q  346 taccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  653035 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 653086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 388
Target Start/End: Complemental strand, 5928324 - 5928281
Alignment:
Q  345 ttaccgggttgagtcacgaccagatcactctctttaagatgttt 388  Q
    ||||| ||||||||||||||||| || |||||||||||||||||    
T  5928324 ttaccaggttgagtcacgaccaggtcgctctctttaagatgttt 5928281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Complemental strand, 42758854 - 42758815
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  42758854 ggttgagtcacgaccaggtcgctctctttaagatgtttcg 42758815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 8083162 - 8083088
Alignment:
Q  316 tttaaaaatcagaa-ctattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttc 389  Q
    |||||||||||||| ||| | |||||| |||||||| ||| |||||||| ||| || |||||||||||| |||||    
T  8083162 tttaaaaatcagaaactaataccaaagaaattaccgagttaagtcacgatcaggtcgctctctttaagacgtttc 8083088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 8980390 - 8980337
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  8980390 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 8980337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 8985510 - 8985457
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  8985510 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 8985457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 13700500 - 13700553
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  13700500 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 13700553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 21299938 - 21299885
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  21299938 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 21299885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 36354166 - 36354219
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||| |||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  36354166 attatcgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 36354219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 41393235 - 41393288
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  41393235 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 41393288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 51019478 - 51019425
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  51019478 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 51019425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 53797619 - 53797672
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  53797619 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 53797672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 54991476 - 54991529
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  54991476 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 54991529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 353 - 389
Target Start/End: Original strand, 6070585 - 6070621
Alignment:
Q  353 ttgagtcacgaccagatcactctctttaagatgtttc 389  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  6070585 ttgagtcatgaccagatcgctctctttaagatgtttc 6070621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 343 - 383
Target Start/End: Complemental strand, 10318886 - 10318846
Alignment:
Q  343 aattaccgggttgagtcacgaccagatcactctctttaaga 383  Q
    ||||||||||||||||||||||||  || ||||||||||||    
T  10318886 aattaccgggttgagtcacgaccatgtcgctctctttaaga 10318846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 351 - 383
Target Start/End: Complemental strand, 32082189 - 32082157
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaaga 383  Q
    ||||||||||||||||||||||||| |||||||    
T  32082189 ggttgagtcacgaccagatcactctttttaaga 32082157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 44833949 - 44833917
Alignment:
Q  19 caattttcatcccgaaccgaaccatgcccaccc 51  Q
    ||||||||||||||||||||||||| |||||||    
T  44833949 caattttcatcccgaaccgaaccatacccaccc 44833917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 316 - 397
Target Start/End: Original strand, 1527 - 1608
Alignment:
Q  316 tttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||| |||||| || ||||| ||||| ||||| |||||| |||||||||||| || |||||||||||| ||||||| |||||    
T  1527 tttagaaatcaaaaatattgtcaaagaaattatcgggttaagtcacgaccaggtcgctctctttaagacgtttcgcggcact 1608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 397
Target Start/End: Original strand, 7001 - 7089
Alignment:
Q  309 ttttgtgtttaaaaatcagaactattgccaaaggaattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||| |||| |||| | || || |||||||||||||| |||||||||| |||||||| ||  ||||||||||| ||||||| |||||    
T  7001 ttttgtatttagaaataaaaaatactgccaaaggaattatcgggttgagttacgaccaggtcgttctctttaagacgtttcgcggcact 7089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 14374127 - 14374178
Alignment:
Q  346 taccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  14374127 taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 14374178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 24771462 - 24771409
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||||||||||| |||||    
T  24771462 attaccgggatgagtcacgaccaggtcgctttctttaagatgtttcgcggcact 24771409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 7805066 - 7805114
Alignment:
Q  349 cgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  7805066 cgggttgagtcacgaccaggtccctctctttaagacgtttcgcggcact 7805114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 13582793 - 13582742
Alignment:
Q  346 taccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  13582793 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 13582742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Complemental strand, 20181162 - 20181123
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcg 390  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  20181162 ggttgagtcacgaccaggtcactctctttaagacgtttcg 20181123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 24435972 - 24435921
Alignment:
Q  346 taccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  24435972 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 24435921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 11672327 - 11672360
Alignment:
Q  22 ttttcatcccgaaccgaaccatgcccacccttac 55  Q
    ||||||||||||||||||||||||| ||||||||    
T  11672327 ttttcatcccgaaccgaaccatgccaacccttac 11672360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 17510048 - 17510101
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  17510048 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 17510101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 26709092 - 26709145
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  26709092 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 26709145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 26978826 - 26978879
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  26978826 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 26978879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 36253816 - 36253869
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  36253816 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 36253869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 42019563 - 42019616
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  42019563 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 42019616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 34075 - 34021
Alignment:
Q  343 aattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||| ||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  34075 aattatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 34021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 3048 - 3101
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  3048 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 3101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 81487 - 81434
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||| |||||    
T  81487 attaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 81434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 13846 - 13792
Alignment:
Q  343 aattaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  13846 aattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 13792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 397
Target Start/End: Original strand, 15280 - 15326
Alignment:
Q  351 ggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    |||||||||||||||| |||||||  |||||||||||||| ||||||    
T  15280 ggttgagtcacgaccatatcactccttttaagatgtttcgtagcact 15326  T

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Target: scaffold0594 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 9313 - 9260
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  9313 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 9260  T

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Target: scaffold0517 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 3553 - 3606
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  3553 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 3606  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 31535 - 31588
Alignment:
Q  344 attaccgggttgagtcacgaccagatcactctctttaagatgtttcgcagcact 397  Q
    ||||||||| |||||||||||||| || || ||||||||| ||||||| |||||    
T  31535 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 31588  T

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