View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18240_low_14 (Length: 353)

Name: NF18240_low_14
Description: NF18240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18240_low_14
NF18240_low_14
[»] chr8 (67 HSPs)
chr8 (1-331)||(35389441-35389772)
chr8 (2-234)||(2146864-2147095)
chr8 (71-234)||(18205789-18205951)
chr8 (69-221)||(22577666-22577817)
chr8 (130-234)||(45454442-45454546)
chr8 (78-234)||(43369790-43369946)
chr8 (5-192)||(7168025-7168212)
chr8 (55-226)||(35966665-35966835)
chr8 (144-234)||(39752931-39753021)
chr8 (69-208)||(1114744-1114881)
chr8 (1-144)||(18438567-18438710)
chr8 (1-139)||(18441443-18441581)
chr8 (1-139)||(34823018-34823156)
chr8 (69-234)||(4866435-4866599)
chr8 (147-234)||(31957886-31957973)
chr8 (147-234)||(41744628-41744715)
chr8 (6-151)||(41855306-41855451)
chr8 (2-119)||(41858143-41858260)
chr8 (118-200)||(43689938-43690020)
chr8 (69-144)||(38872927-38873002)
chr8 (8-139)||(42602400-42602531)
chr8 (1-139)||(40077252-40077390)
chr8 (2-127)||(39751008-39751132)
chr8 (92-194)||(7340091-7340193)
chr8 (69-139)||(21406268-21406338)
chr8 (69-139)||(21800760-21800830)
chr8 (43-144)||(42605231-42605332)
chr8 (2-62)||(43377331-43377391)
chr8 (1-141)||(44052226-44052366)
chr8 (1-88)||(39753050-39753137)
chr8 (2-139)||(22550867-22551003)
chr8 (1-77)||(5300680-5300756)
chr8 (50-122)||(7172606-7172678)
chr8 (2-122)||(41743824-41743944)
chr8 (147-194)||(30305516-30305563)
chr8 (64-139)||(40740902-40740977)
chr8 (64-126)||(27412333-27412395)
chr8 (1-139)||(41250074-41250211)
chr8 (13-118)||(3395837-3395942)
chr8 (5-122)||(20549251-20549368)
chr8 (101-194)||(32378868-32378961)
chr8 (101-194)||(32432823-32432916)
chr8 (50-139)||(35962289-35962378)
chr8 (92-141)||(36677929-36677978)
chr8 (99-139)||(41016445-41016485)
chr8 (92-139)||(184554-184601)
chr8 (92-139)||(8419428-8419475)
chr8 (69-136)||(28646252-28646319)
chr8 (69-136)||(28650836-28650903)
chr8 (92-139)||(32375675-32375722)
chr8 (40-139)||(39601676-39601775)
chr8 (69-139)||(21835181-21835251)
chr8 (97-139)||(26451509-26451551)
chr8 (101-139)||(26663035-26663073)
chr8 (97-139)||(32383207-32383249)
chr8 (97-139)||(32437162-32437204)
chr8 (97-139)||(34366940-34366982)
chr8 (2-52)||(34503147-34503197)
chr8 (238-268)||(35389410-35389440)
chr8 (97-139)||(45133275-45133317)
chr8 (67-139)||(15033149-15033222)
chr8 (98-139)||(43262451-43262492)
chr8 (61-137)||(13783112-13783188)
chr8 (92-136)||(22014270-22014314)
chr8 (65-120)||(30970187-30970243)
chr8 (69-121)||(38135629-38135681)
chr8 (1-120)||(43188006-43188126)
[»] chr3 (100 HSPs)
chr3 (1-238)||(7837525-7837765)
chr3 (5-234)||(29929363-29929592)
chr3 (5-234)||(29978517-29978746)
chr3 (5-238)||(28611004-28611236)
chr3 (5-234)||(29918248-29918477)
chr3 (5-234)||(29967401-29967630)
chr3 (2-234)||(48250777-48251008)
chr3 (69-234)||(9429756-9429921)
chr3 (130-238)||(6505879-6505988)
chr3 (1-234)||(14398468-14398700)
chr3 (67-180)||(9582546-9582659)
chr3 (69-234)||(13747626-13747790)
chr3 (2-137)||(7247864-7247999)
chr3 (97-243)||(36817421-36817565)
chr3 (9-139)||(41802939-41803069)
chr3 (2-108)||(55267375-55267481)
chr3 (147-234)||(46993138-46993225)
chr3 (69-234)||(7842924-7843089)
chr3 (1-138)||(46989480-46989617)
chr3 (2-139)||(6489267-6489400)
chr3 (147-222)||(23443052-23443127)
chr3 (2-144)||(2432940-2433082)
chr3 (2-118)||(19454348-19454464)
chr3 (1-139)||(11380374-11380512)
chr3 (69-151)||(19440257-19440339)
chr3 (2-144)||(41579721-41579863)
chr3 (1-151)||(41805665-41805815)
chr3 (2-134)||(46344871-46345003)
chr3 (5-137)||(55385074-55385206)
chr3 (160-238)||(11389569-11389647)
chr3 (1-139)||(41577008-41577146)
chr3 (5-139)||(52570568-52570701)
chr3 (2-151)||(52567697-52567846)
chr3 (148-208)||(2745165-2745225)
chr3 (13-139)||(13896878-13897004)
chr3 (69-139)||(34691626-34691696)
chr3 (150-208)||(50953357-50953415)
chr3 (1-139)||(55207665-55207803)
chr3 (40-139)||(7839503-7839600)
chr3 (4-139)||(20918013-20918148)
chr3 (4-139)||(20926975-20927110)
chr3 (70-138)||(30256006-30256074)
chr3 (145-208)||(16444672-16444735)
chr3 (1-76)||(32060277-32060352)
chr3 (1-80)||(55205270-55205349)
chr3 (1-139)||(42756092-42756230)
chr3 (2-139)||(43476125-43476263)
chr3 (2-116)||(50216879-50216993)
chr3 (2-139)||(600546-600683)
chr3 (2-119)||(6505973-6506090)
chr3 (40-139)||(19341596-19341695)
chr3 (8-110)||(66841-66942)
chr3 (69-139)||(2743399-2743469)
chr3 (122-208)||(21956138-21956224)
chr3 (92-194)||(30947600-30947702)
chr3 (97-139)||(48246441-48246483)
chr3 (75-141)||(48888747-48888813)
chr3 (2-139)||(51402400-51402537)
chr3 (91-139)||(2062409-2062457)
chr3 (64-139)||(2647701-2647777)
chr3 (92-139)||(30943213-30943260)
chr3 (2-120)||(16647168-16647286)
chr3 (97-139)||(34049109-34049151)
chr3 (1-139)||(43478832-43478970)
chr3 (5-111)||(43571715-43571821)
chr3 (70-136)||(49219796-49219862)
chr3 (97-139)||(54389824-54389866)
chr3 (2-139)||(4002507-4002643)
chr3 (2-122)||(14402989-14403109)
chr3 (5-117)||(45101872-45101984)
chr3 (92-139)||(1293401-1293448)
chr3 (92-139)||(3501897-3501944)
chr3 (92-139)||(41844366-41844413)
chr3 (92-194)||(3948753-3948855)
chr3 (97-139)||(4004805-4004847)
chr3 (92-138)||(8475850-8475896)
chr3 (69-111)||(20366193-20366235)
chr3 (101-139)||(35743584-35743622)
chr3 (2-139)||(36812770-36812908)
chr3 (97-139)||(42760211-42760253)
chr3 (97-139)||(44227141-44227183)
chr3 (101-139)||(46697744-46697782)
chr3 (97-139)||(49140849-49140891)
chr3 (69-139)||(49194954-49195024)
chr3 (101-139)||(50477213-50477251)
chr3 (70-139)||(3112799-3112868)
chr3 (69-122)||(13743294-13743347)
chr3 (99-144)||(34645593-34645638)
chr3 (69-122)||(41137719-41137772)
chr3 (101-138)||(44523456-44523493)
chr3 (40-137)||(49196453-49196550)
chr3 (106-139)||(50998656-50998689)
chr3 (2-83)||(51696573-51696654)
chr3 (107-139)||(4004885-4004917)
chr3 (130-194)||(8160942-8161006)
chr3 (64-139)||(11270286-11270361)
chr3 (99-139)||(36134354-36134394)
chr3 (11-111)||(42804398-42804498)
chr3 (70-126)||(46347736-46347791)
chr3 (71-139)||(49268847-49268915)
[»] chr4 (82 HSPs)
chr4 (2-234)||(4979824-4980056)
chr4 (1-234)||(11494477-11494709)
chr4 (5-234)||(21470840-21471069)
chr4 (124-238)||(4975821-4975935)
chr4 (2-234)||(38464676-38464904)
chr4 (144-238)||(44049174-44049268)
chr4 (69-208)||(9889995-9890133)
chr4 (69-208)||(15999733-15999871)
chr4 (1-139)||(44051094-44051232)
chr4 (130-234)||(4768714-4768818)
chr4 (130-234)||(18581240-18581343)
chr4 (1-137)||(49572904-49573040)
chr4 (2-151)||(6280791-6280940)
chr4 (143-234)||(3449987-3450078)
chr4 (97-208)||(19073589-19073699)
chr4 (5-121)||(21472504-21472620)
chr4 (5-144)||(955729-955868)
chr4 (5-139)||(29700304-29700438)
chr4 (5-144)||(37959717-37959856)
chr4 (5-144)||(51426474-51426613)
chr4 (5-139)||(44561332-44561466)
chr4 (70-234)||(24417327-24417487)
chr4 (130-234)||(17139660-17139763)
chr4 (145-208)||(13173310-13173373)
chr4 (5-139)||(958596-958729)
chr4 (147-208)||(1087912-1087973)
chr4 (1-122)||(50278817-50278938)
chr4 (130-215)||(51644426-51644510)
chr4 (69-208)||(41023387-41023523)
chr4 (40-120)||(50274732-50274812)
chr4 (40-139)||(1041907-1042006)
chr4 (1-139)||(56138180-56138323)
chr4 (70-144)||(34151616-34151690)
chr4 (5-111)||(34154432-34154538)
chr4 (1-86)||(44049085-44049164)
chr4 (2-118)||(56304811-56304926)
chr4 (5-116)||(4768615-4768726)
chr4 (69-139)||(15995723-15995793)
chr4 (69-139)||(19069188-19069258)
chr4 (92-139)||(38460450-38460497)
chr4 (76-139)||(55407795-55407858)
chr4 (176-234)||(3403908-3403966)
chr4 (97-139)||(6178112-6178154)
chr4 (69-139)||(17342143-17342213)
chr4 (97-139)||(21022890-21022932)
chr4 (65-135)||(24414832-24414902)
chr4 (69-139)||(34503710-34503780)
chr4 (97-139)||(49094113-49094155)
chr4 (102-139)||(67626-67663)
chr4 (2-139)||(16984163-16984300)
chr4 (97-138)||(20208539-20208580)
chr4 (2-51)||(28320493-28320542)
chr4 (98-139)||(39590570-39590611)
chr4 (69-137)||(9472859-9472927)
chr4 (2-118)||(39588026-39588142)
chr4 (5-117)||(49422080-49422187)
chr4 (64-139)||(55793915-55793991)
chr4 (103-138)||(72510-72545)
chr4 (68-111)||(19993042-19993085)
chr4 (130-185)||(30042513-30042567)
chr4 (92-139)||(30726743-30726790)
chr4 (92-139)||(37563282-37563329)
chr4 (92-139)||(39773428-39773475)
chr4 (92-139)||(40358282-40358329)
chr4 (147-194)||(49566422-49566469)
chr4 (92-139)||(54634017-54634064)
chr4 (69-139)||(18884506-18884576)
chr4 (101-139)||(31425320-31425358)
chr4 (13-139)||(33383750-33383876)
chr4 (97-139)||(41795358-41795400)
chr4 (1-47)||(46097041-46097087)
chr4 (97-139)||(51492100-51492142)
chr4 (64-121)||(3403843-3403900)
chr4 (3-72)||(4975752-4975821)
chr4 (1-138)||(8109324-8109461)
chr4 (92-141)||(26792244-26792293)
chr4 (1-82)||(44674098-44674178)
chr4 (99-139)||(4786336-4786376)
chr4 (70-118)||(6283464-6283512)
chr4 (69-141)||(9473661-9473733)
chr4 (103-139)||(26932619-26932655)
chr4 (64-136)||(43176633-43176705)
[»] chr5 (69 HSPs)
chr5 (42-234)||(4204118-4204308)
chr5 (3-234)||(7800894-7801125)
chr5 (13-234)||(33993225-33993445)
chr5 (5-215)||(18538262-18538471)
chr5 (72-215)||(30354323-30354465)
chr5 (65-234)||(28387266-28387434)
chr5 (3-234)||(34123830-34124073)
chr5 (97-243)||(1035213-1035358)
chr5 (2-144)||(3603145-3603287)
chr5 (55-243)||(25896978-25897165)
chr5 (146-238)||(31098838-31098930)
chr5 (2-139)||(18307189-18307325)
chr5 (147-234)||(27867753-27867840)
chr5 (5-137)||(1398541-1398673)
chr5 (1-139)||(20200150-20200288)
chr5 (2-139)||(25877556-25877692)
chr5 (130-234)||(7021791-7021895)
chr5 (122-237)||(34077821-34077936)
chr5 (1-103)||(7796594-7796696)
chr5 (2-139)||(20192287-20192424)
chr5 (130-234)||(13568008-13568112)
chr5 (5-136)||(34682194-34682325)
chr5 (145-208)||(38860136-38860199)
chr5 (2-137)||(41201662-41201797)
chr5 (65-139)||(33995150-33995224)
chr5 (2-139)||(28388521-28388658)
chr5 (50-139)||(34122506-34122595)
chr5 (65-137)||(8702202-8702274)
chr5 (130-234)||(37820787-37820891)
chr5 (2-138)||(41799770-41799906)
chr5 (145-208)||(11033396-11033459)
chr5 (1-111)||(18310051-18310161)
chr5 (1-138)||(17966889-17967026)
chr5 (1-135)||(3600269-3600404)
chr5 (40-139)||(7757297-7757396)
chr5 (2-121)||(13568095-13568214)
chr5 (80-139)||(25497523-25497582)
chr5 (65-139)||(27532619-27532693)
chr5 (147-225)||(28886335-28886413)
chr5 (5-120)||(1397371-1397486)
chr5 (148-207)||(21979646-21979704)
chr5 (64-139)||(30192488-30192563)
chr5 (1-122)||(31094496-31094616)
chr5 (69-136)||(42098304-42098371)
chr5 (65-139)||(7017509-7017583)
chr5 (97-139)||(19037472-19037514)
chr5 (50-140)||(42539374-42539464)
chr5 (5-122)||(24053117-24053234)
chr5 (92-141)||(38855711-38855760)
chr5 (70-139)||(38968097-38968166)
chr5 (55-127)||(39743162-39743234)
chr5 (2-127)||(8680260-8680381)
chr5 (98-137)||(11346037-11346076)
chr5 (92-139)||(13837748-13837795)
chr5 (147-194)||(14279903-14279950)
chr5 (5-116)||(19228671-19228782)
chr5 (92-139)||(28238163-28238210)
chr5 (69-136)||(42099087-42099154)
chr5 (50-124)||(25499904-25499978)
chr5 (1-47)||(26366821-26366867)
chr5 (2-83)||(42537135-42537216)
chr5 (99-139)||(5807-5847)
chr5 (6-82)||(512799-512875)
chr5 (67-111)||(4434332-4434376)
chr5 (80-136)||(24050039-24050095)
chr5 (64-139)||(30708898-30708974)
chr5 (97-141)||(35926391-35926435)
chr5 (55-139)||(41798805-41798889)
chr5 (72-119)||(43177918-43177966)
[»] chr2 (78 HSPs)
chr2 (5-234)||(45475377-45475605)
chr2 (92-234)||(41183131-41183273)
chr2 (5-234)||(435280-435508)
chr2 (1-234)||(41008835-41009067)
chr2 (1-234)||(24607486-24607708)
chr2 (92-238)||(41053471-41053617)
chr2 (13-207)||(34921694-34921886)
chr2 (2-238)||(43950147-43950380)
chr2 (5-221)||(19187144-19187359)
chr2 (2-151)||(41497406-41497555)
chr2 (62-234)||(12908337-12908508)
chr2 (1-144)||(35493338-35493481)
chr2 (69-234)||(27276285-27276446)
chr2 (93-208)||(7263042-7263156)
chr2 (5-139)||(28342460-28342594)
chr2 (2-139)||(25184832-25184968)
chr2 (130-234)||(1100986-1101089)
chr2 (5-137)||(2917620-2917752)
chr2 (159-234)||(9651256-9651331)
chr2 (1-139)||(9660057-9660195)
chr2 (2-122)||(41181371-41181491)
chr2 (13-139)||(35490625-35490751)
chr2 (2-119)||(41053690-41053807)
chr2 (40-139)||(24601611-24601710)
chr2 (40-139)||(24612404-24612503)
chr2 (168-238)||(1149555-1149624)
chr2 (147-208)||(20951006-20951067)
chr2 (56-144)||(23409498-23409586)
chr2 (40-139)||(29397882-29397981)
chr2 (145-208)||(39794039-39794102)
chr2 (1-139)||(23346714-23346851)
chr2 (147-208)||(3803503-3803564)
chr2 (2-139)||(41500236-41500373)
chr2 (5-125)||(19186684-19186804)
chr2 (171-243)||(24749751-24749823)
chr2 (43-139)||(34639316-34639412)
chr2 (3-139)||(41004464-41004599)
chr2 (68-139)||(43491109-43491180)
chr2 (1-139)||(7189953-7190090)
chr2 (1-138)||(82265-82401)
chr2 (3-139)||(29093830-29093971)
chr2 (92-194)||(18003219-18003321)
chr2 (130-208)||(38945798-38945876)
chr2 (69-139)||(43943690-43943760)
chr2 (2-75)||(16580479-16580552)
chr2 (2-139)||(24512101-24512238)
chr2 (50-122)||(2648780-2648852)
chr2 (97-141)||(28477067-28477111)
chr2 (1-128)||(1149405-1149532)
chr2 (92-194)||(213399-213501)
chr2 (92-194)||(10624412-10624514)
chr2 (69-127)||(14181836-14181894)
chr2 (97-139)||(17424161-17424203)
chr2 (64-138)||(17911169-17911243)
chr2 (1-83)||(41052614-41052696)
chr2 (69-139)||(42177216-42177286)
chr2 (97-139)||(43982228-43982270)
chr2 (11-116)||(12905492-12905597)
chr2 (69-136)||(14456503-14456570)
chr2 (92-139)||(22003403-22003450)
chr2 (79-134)||(25964822-25964877)
chr2 (92-139)||(28468665-28468712)
chr2 (69-139)||(3795338-3795408)
chr2 (97-139)||(3943194-3943236)
chr2 (65-139)||(40156396-40156470)
chr2 (98-139)||(2271739-2271780)
chr2 (2-31)||(15488252-15488281)
chr2 (92-137)||(18000256-18000301)
chr2 (64-137)||(24541732-24541805)
chr2 (92-141)||(41564492-41564541)
chr2 (102-139)||(43536136-43536173)
chr2 (5-94)||(45479841-45479930)
chr2 (50-122)||(1096577-1096649)
chr2 (103-139)||(5351734-5351770)
chr2 (50-122)||(34918434-34918506)
chr2 (69-121)||(38945763-38945815)
chr2 (2-82)||(43870180-43870260)
chr2 (92-136)||(44100803-44100847)
[»] chr7 (57 HSPs)
chr7 (1-234)||(47060860-47061092)
chr7 (92-234)||(18105397-18105539)
chr7 (2-141)||(34622433-34622572)
chr7 (1-208)||(42499342-42499548)
chr7 (147-234)||(47741816-47741903)
chr7 (2-141)||(34623380-34623519)
chr7 (1-144)||(48314607-48314749)
chr7 (1-111)||(46863374-46863484)
chr7 (2-139)||(47776266-47776403)
chr7 (147-234)||(29593262-29593349)
chr7 (2-139)||(28980174-28980312)
chr7 (1-139)||(30355241-30355379)
chr7 (5-137)||(9494810-9494942)
chr7 (50-139)||(37340284-37340373)
chr7 (2-125)||(36392059-36392182)
chr7 (130-234)||(618658-618762)
chr7 (2-139)||(19044228-19044364)
chr7 (2-139)||(20710272-20710408)
chr7 (5-122)||(36186492-36186608)
chr7 (69-139)||(10705249-10705319)
chr7 (68-118)||(21188423-21188473)
chr7 (81-139)||(42682007-42682065)
chr7 (1-75)||(46596829-46596903)
chr7 (14-144)||(46860457-46860587)
chr7 (153-234)||(10708189-10708269)
chr7 (2-111)||(21185553-21185662)
chr7 (40-137)||(34742399-34742496)
chr7 (1-134)||(41049196-41049328)
chr7 (97-139)||(9367726-9367768)
chr7 (40-118)||(34139869-34139947)
chr7 (92-194)||(43032998-43033100)
chr7 (5-78)||(28112779-28112852)
chr7 (99-139)||(17840892-17840932)
chr7 (56-120)||(27453615-27453679)
chr7 (95-139)||(34738391-34738435)
chr7 (108-215)||(36185842-36185955)
chr7 (99-139)||(40587692-40587732)
chr7 (1-105)||(48316296-48316400)
chr7 (65-124)||(30846812-30846871)
chr7 (65-127)||(33603197-33603260)
chr7 (92-139)||(45767863-45767910)
chr7 (92-138)||(11629764-11629810)
chr7 (101-139)||(15070388-15070426)
chr7 (101-139)||(35606822-35606860)
chr7 (2-52)||(35839324-35839374)
chr7 (64-146)||(38555408-38555490)
chr7 (2-124)||(46738736-46738858)
chr7 (92-137)||(10098121-10098166)
chr7 (92-137)||(15074232-15074277)
chr7 (2-75)||(21190654-21190727)
chr7 (1-86)||(40590546-40590631)
chr7 (1-62)||(48829896-48829957)
chr7 (69-121)||(618745-618797)
chr7 (99-139)||(20353932-20353972)
chr7 (1-29)||(41047711-41047739)
chr7 (2-62)||(41623894-41623954)
chr7 (102-194)||(45763414-45763506)
[»] scaffold0794 (1 HSPs)
scaffold0794 (92-234)||(5295-5437)
[»] chr1 (90 HSPs)
chr1 (5-234)||(46973141-46973368)
chr1 (2-234)||(9711558-9711790)
chr1 (33-234)||(19499020-19499218)
chr1 (74-234)||(7981047-7981206)
chr1 (1-212)||(8460026-8460236)
chr1 (5-234)||(13173773-13174000)
chr1 (2-151)||(49924790-49924939)
chr1 (2-234)||(22345195-22345423)
chr1 (97-229)||(19054162-19054294)
chr1 (5-207)||(36076493-36076693)
chr1 (69-234)||(15047283-15047448)
chr1 (130-234)||(37014953-37015057)
chr1 (130-238)||(1654806-1654914)
chr1 (1-137)||(11183119-11183255)
chr1 (5-137)||(41804037-41804169)
chr1 (69-208)||(6562096-6562233)
chr1 (2-144)||(46141716-46141858)
chr1 (108-234)||(50117685-50117810)
chr1 (5-110)||(19053996-19054101)
chr1 (2-151)||(29438010-29438159)
chr1 (1-128)||(13971997-13972122)
chr1 (147-228)||(23913909-23913990)
chr1 (130-234)||(29356598-29356702)
chr1 (130-234)||(41453874-41453978)
chr1 (73-234)||(21944291-21944448)
chr1 (147-234)||(44465649-44465736)
chr1 (5-144)||(26633467-26633603)
chr1 (43-139)||(52802105-52802201)
chr1 (2-137)||(49927517-49927652)
chr1 (147-208)||(5077993-5078054)
chr1 (130-234)||(4516067-4516170)
chr1 (2-138)||(23276111-23276247)
chr1 (145-208)||(44621051-44621114)
chr1 (69-139)||(3941152-3941222)
chr1 (2-144)||(6437536-6437678)
chr1 (2-144)||(18975117-18975259)
chr1 (5-139)||(1656091-1656220)
chr1 (76-145)||(36072377-36072446)
chr1 (145-208)||(13629468-13629531)
chr1 (145-208)||(22397870-22397933)
chr1 (92-194)||(31945808-31945910)
chr1 (147-208)||(30905823-30905883)
chr1 (40-139)||(13178134-13178233)
chr1 (16-139)||(35258874-35258997)
chr1 (55-137)||(25040080-25040162)
chr1 (69-139)||(44470013-44470083)
chr1 (74-139)||(48751412-48751477)
chr1 (2-139)||(51271593-51271730)
chr1 (64-139)||(13636124-13636200)
chr1 (69-116)||(4516032-4516079)
chr1 (2-121)||(27484993-27485112)
chr1 (5-108)||(35521551-35521654)
chr1 (1-52)||(49874941-49874992)
chr1 (92-194)||(3983111-3983213)
chr1 (69-139)||(6557916-6557986)
chr1 (5-139)||(38689869-38690002)
chr1 (97-139)||(44336278-44336320)
chr1 (69-115)||(51337539-51337585)
chr1 (5-122)||(51666658-51666774)
chr1 (64-139)||(19159618-19159694)
chr1 (130-194)||(20349493-20349557)
chr1 (55-139)||(23359351-23359435)
chr1 (101-141)||(26879295-26879335)
chr1 (5-117)||(36908515-36908627)
chr1 (92-139)||(3943998-3944045)
chr1 (92-139)||(3993845-3993892)
chr1 (92-139)||(8548671-8548718)
chr1 (92-139)||(15051350-15051397)
chr1 (1-47)||(1872041-1872087)
chr1 (101-139)||(3728768-3728806)
chr1 (2-52)||(9618656-9618706)
chr1 (97-139)||(19161921-19161963)
chr1 (1-111)||(23272782-23272892)
chr1 (92-138)||(38119614-38119660)
chr1 (92-194)||(38776073-38776175)
chr1 (97-139)||(46216427-46216469)
chr1 (97-139)||(50617234-50617276)
chr1 (69-139)||(51289962-51290032)
chr1 (65-122)||(19495063-19495120)
chr1 (69-122)||(27115842-27115895)
chr1 (90-139)||(29424402-29424451)
chr1 (13-118)||(35527036-35527141)
chr1 (2-139)||(46886390-46886526)
chr1 (2-30)||(640987-641015)
chr1 (103-139)||(13633904-13633940)
chr1 (69-117)||(30905772-30905820)
chr1 (65-137)||(41459215-41459287)
chr1 (101-177)||(50117811-50117886)
chr1 (40-120)||(51288859-51288939)
chr1 (1-29)||(51291696-51291724)
[»] scaffold0340 (1 HSPs)
scaffold0340 (2-234)||(1088-1319)
[»] chr6 (55 HSPs)
chr6 (2-234)||(18605979-18606210)
chr6 (70-234)||(13388615-13388779)
chr6 (144-238)||(7363220-7363314)
chr6 (69-234)||(31146374-31146538)
chr6 (158-243)||(2052525-2052610)
chr6 (50-215)||(16192751-16192915)
chr6 (101-234)||(28249918-28250051)
chr6 (69-238)||(24218020-24218187)
chr6 (1-122)||(29286162-29286283)
chr6 (2-135)||(7361125-7361258)
chr6 (1-122)||(25141098-25141219)
chr6 (102-234)||(26701853-26701983)
chr6 (40-139)||(31768725-31768824)
chr6 (169-227)||(7361262-7361320)
chr6 (5-139)||(23958827-23958961)
chr6 (130-234)||(23985915-23986018)
chr6 (69-141)||(32643521-32643593)
chr6 (1-139)||(11840252-11840390)
chr6 (1-138)||(2050962-2051098)
chr6 (50-139)||(12783959-12784048)
chr6 (3-144)||(13404629-13404770)
chr6 (2-139)||(29076325-29076462)
chr6 (2-139)||(29109858-29109995)
chr6 (2-139)||(29111298-29111435)
chr6 (130-234)||(18347077-18347181)
chr6 (24-111)||(23986011-23986098)
chr6 (140-234)||(2260254-2260347)
chr6 (40-110)||(7537170-7537240)
chr6 (65-122)||(2258309-2258366)
chr6 (69-138)||(28362734-28362803)
chr6 (2-110)||(2052615-2052721)
chr6 (64-139)||(22305103-22305179)
chr6 (2-110)||(29065674-29065782)
chr6 (2-110)||(29074687-29074795)
chr6 (2-110)||(29079451-29079559)
chr6 (2-110)||(29107260-29107368)
chr6 (2-122)||(35021282-35021402)
chr6 (82-137)||(24088790-24088844)
chr6 (97-139)||(6204856-6204898)
chr6 (97-139)||(11691823-11691865)
chr6 (5-111)||(13479663-13479769)
chr6 (148-206)||(34231559-34231616)
chr6 (2-111)||(13401420-13401529)
chr6 (155-220)||(13479790-13479854)
chr6 (2-110)||(29061230-29061338)
chr6 (103-194)||(1612694-1612785)
chr6 (64-139)||(9049086-9049161)
chr6 (92-139)||(13382653-13382700)
chr6 (69-139)||(8193211-8193281)
chr6 (101-139)||(18351645-18351683)
chr6 (101-139)||(26712081-26712119)
chr6 (90-139)||(9048097-9048146)
chr6 (98-139)||(30258317-30258358)
chr6 (101-137)||(24721962-24721998)
chr6 (92-136)||(26712228-26712272)
[»] scaffold0219 (3 HSPs)
scaffold0219 (130-238)||(15739-15847)
scaffold0219 (1-139)||(20114-20253)
scaffold0219 (40-119)||(15675-15754)
[»] scaffold0361 (1 HSPs)
scaffold0361 (69-226)||(4316-4472)
[»] scaffold0116 (2 HSPs)
scaffold0116 (147-243)||(11353-11449)
scaffold0116 (1-136)||(15960-16095)
[»] scaffold0494 (3 HSPs)
scaffold0494 (103-208)||(892-996)
scaffold0494 (92-139)||(5355-5402)
scaffold0494 (97-139)||(860-902)
[»] scaffold0038 (1 HSPs)
scaffold0038 (101-234)||(50080-50213)
[»] scaffold0341 (1 HSPs)
scaffold0341 (69-208)||(17286-17423)
[»] scaffold0744 (1 HSPs)
scaffold0744 (92-208)||(357-472)
[»] scaffold0147 (1 HSPs)
scaffold0147 (143-234)||(768-859)
[»] scaffold0360 (1 HSPs)
scaffold0360 (2-214)||(7241-7444)
[»] scaffold0184 (2 HSPs)
scaffold0184 (40-136)||(18003-18099)
scaffold0184 (2-139)||(18295-18432)
[»] scaffold0078 (2 HSPs)
scaffold0078 (40-136)||(54745-54841)
scaffold0078 (2-139)||(54412-54549)
[»] scaffold0618 (1 HSPs)
scaffold0618 (2-134)||(3820-3951)
[»] scaffold0192 (1 HSPs)
scaffold0192 (2-59)||(25886-25943)
[»] scaffold0169 (1 HSPs)
scaffold0169 (1-62)||(1724-1785)
[»] scaffold1379 (1 HSPs)
scaffold1379 (2-136)||(439-573)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-139)||(22336-22474)
[»] scaffold1500 (1 HSPs)
scaffold1500 (69-139)||(761-831)
[»] scaffold0388 (1 HSPs)
scaffold0388 (5-111)||(11740-11846)
[»] scaffold0176 (1 HSPs)
scaffold0176 (40-118)||(794-872)
[»] scaffold2089 (1 HSPs)
scaffold2089 (147-202)||(279-334)
[»] scaffold0260 (1 HSPs)
scaffold0260 (130-194)||(11816-11880)
[»] scaffold0101 (1 HSPs)
scaffold0101 (64-139)||(36536-36612)
[»] scaffold0199 (1 HSPs)
scaffold0199 (97-139)||(12390-12432)
[»] scaffold0065 (1 HSPs)
scaffold0065 (97-139)||(65347-65389)
[»] scaffold0012 (1 HSPs)
scaffold0012 (97-139)||(232834-232876)
[»] scaffold0513 (1 HSPs)
scaffold0513 (69-141)||(8200-8272)
[»] scaffold0011 (1 HSPs)
scaffold0011 (102-138)||(235933-235969)


Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 35389441 - 35389772
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||    
T  35389441 agagaattgttgttgacacattgcataaggctgagacatacgagtaatttacgtttttgcctcttcgacagttaactgccgagaaattcaaaaaccagct 35389540  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35389541 gcagttaactgccgaggaaaaccttggttgttaaatgccaaaaaatatgtttcatcagatgaaacaaccatctgctccccctacatactattttcatcat 35389640  T
Q  201 caacttcaataccacctccattcaatccccaaattcaagttttaatgctgcaaactagaaag-aaaaaatggatatggaaagattagacaaagaaaagaa 299  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  35389641 caacttcaataccacctccattcaatccccaaattcaacttttaatgctgcaaaatagaaagaaaaaaatggatatggaaagattagacaaagaaaagaa 35389740  T
Q  300 gaacaaggtagaccgataggccaggtagaact 331  Q
    |||||||||||||||||||| |||||||||||    
T  35389741 gaacaaggtagaccgataggtcaggtagaact 35389772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 2147095 - 2146864
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||| ||||||| ||| || ||||||||||| |||||||  ||  ||  ||||||||||||| | ||||  ||| | |||||    
T  2147095 gagaattgttgttgacacattgtataaggttgaggcacacgagtaattttcgtttttttcccctcagcagttaactgccggggaatttgaaacc-ggctg 2146997  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatc 201  Q
    |||| ||||| |||||||||||||||| |||||||||| |  |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  2146996 cagtaaactgccgaggaaaacctcggtagttaactgccgatgaatatgtttcattagatgaaacagccacctgctccccctacatactattttcatcatc 2146897  T
Q  202 aacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||||||||||||||||||    
T  2146896 aacttcaataccacctccattcaatccccaaat 2146864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 18205789 - 18205951
Alignment:
Q  71 gttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaacca 170  Q
    ||||||||||||  ||||||||||| ||||||||||||||| | |||||||||||||| |||||||||| | || ||||||||||||||||||||| |||    
T  18205789 gttaactgccgaagaattcaaaaaccggctgcagttaactgccaaggaaaacctcggtagttaactgccgagaattatgtttcatcagatgaaacagcca 18205888  T
Q  171 cctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||| ||||| ||| ||||||||    
T  18205889 cctgctccccctacacacta-tttcatcatcaacttccataccacttccatccaaaccccaaat 18205951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 221
Target Start/End: Original strand, 22577666 - 22577817
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||| ||| ||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| | || ||||||||||||||||||||| |    
T  22577666 cagttaattgctgaggaattcaaaaattggttgcagttaactgtcgaggaaaacctcggtagttaactgccgagaagtatgtttcatcagatgaaacagc 22577765  T
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccat 221  Q
    ||||||||||||| ||| |||| ||||||| |||||||| ||||||| |||||    
T  22577766 cacctgctccccccacacacta-tttcatcgtcaacttccataccacttccat 22577817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 45454442 - 45454546
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  45454442 gttaactgccgaggaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcatttccacctccattcaatccc 45454541  T
Q  230 caaat 234  Q
    |||||    
T  45454542 caaat 45454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 78 - 234
Target Start/End: Original strand, 43369790 - 43369946
Alignment:
Q  78 gccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctc 177  Q
    |||||| ||||||||||  ||||||| ||||||  |||||||| |||||   ||||||| || |  ||||||| |||||||||||||||  |||||||||    
T  43369790 gccgaggaattcaaaaatcggctgcaattaactaccgaggaaatcctcgacagttaactaccgaggaatatgtctcatcagatgaaacagtcacctgctc 43369889  T
Q  178 cccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43369890 tccctatatactattttcatcatcaacttcaataccacctccattcaatccccaaat 43369946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 192
Target Start/End: Original strand, 7168025 - 7168212
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  ||| || || |||||  |||| ||||||||  ||||| |||| |||||||  ||||||||||| ||||||||    
T  7168025 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccctcgactgttagctgccgaagaattcaaaaaccggctgcag 7168124  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactatt 192  Q
    ||||||| |||||||||||||||| ||| ||| || | |||||| |||||||||||||||||  ||||| |||||| |||| ||||||    
T  7168125 ttaactgccgaggaaaacctcggtagttgactaccgagaaatatatttcatcagatgaaacagtcacctactccccttacacactatt 7168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 55 - 226
Target Start/End: Complemental strand, 35966835 - 35966665
Alignment:
Q  55 ttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttca 154  Q
    ||||||||  ||| ||||||||||||||| ||||  ||| | | |||||||||| |||||| |||| ||||||| ||||||||   |  || ||||||||    
T  35966835 ttttgccccctcggcagttaactgccgaggaatttgaaatccgactgcagttaattgtcgaagaaatcctcggtagttaactgtagaggaa-atgtttca 35966737  T
Q  155 tcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaat 226  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  35966736 tcagatgaaacagccacctgctccccctacatactattttcatcatcaacttcattttcacctccattcaat 35966665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 39753021 - 39752931
Alignment:
Q  144 aatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||||||||   ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39753021 aatatgtttcatcagatgaaacatatacctattccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 39752931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 208
Target Start/End: Original strand, 1114744 - 1114881
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||||||||  ||| | ||||||||||||||| |||||||| ||||||| |||||||||| |   | |||||||||||||||||||| |    
T  1114744 cagttaactgccgagaaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgaggga-atgtttcatcagatgaaacagc 1114842  T
Q  169 cacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||| |||||||| ||||||||| ||||||||||||    
T  1114843 cacctgct-cccctacacactattttcttcatcaacttca 1114881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18438567 - 18438710
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||  ||  || || |||||  |||| |||||||| |||| ||||||||||  ||| ||||||| ||| ||||    
T  18438567 agagaattgttgttgacacattgcataaggctgatgcacacaagtaaaatacgcttttgccccttcggcagttaactgttgaggaattcaataaccggct 18438666  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    ||||||||||| |||||||||||||||  |||||||||| ||||    
T  18438667 gcagttaactgccgaggaaaacctcgggagttaactgccgaaaa 18438710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 18441581 - 18441443
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||||||||||||||||| |||||||  |||||| || |||||  |||||||||||||  ||| ||||||||||||||||||||||| ||| |  |    
T  18441581 agagaattgttgttgacacatttcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattcaataaccgatt 18441482  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    | ||||||||| |||| ||||||||||  ||||||||||    
T  18441481 gtagttaactgccgagaaaaacctcggcagttaactgcc 18441443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 34823156 - 34823018
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||| ||||||| ||| || ||  ||||| |||||||||| ||  ||| |||||||||| |||| |||| ||||   ||||    
T  34823156 agagaattgttgttgacacattgtataaggttgaggcacacacgtaatatacgtttttgtcctctcggcagttaactgtcgaggaattaaaaatacggct 34823057  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  34823056 gcagttaattgtcgaggaaaacctcggtagttaactgcc 34823018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 4866435 - 4866599
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    |||||||||| | |||||||||||||| ||||||||||||||  ||||     ||||||| |||||||| | | ||| |||||||||||||||||||| |    
T  4866435 cagttaactgtcaagaaattcaaaaaccggctgcagttaactaccgagtttttcctcggtagttaactgtcgagaaaaatgtttcatcagatgaaacagc 4866534  T
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||| |||||||||| | || ||||||||| |||||| ||||||| |||||  |||||||||||    
T  4866535 cacctgttccccctacacaata-tttcatcattaacttccataccacttccatctaatccccaaat 4866599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 31957886 - 31957973
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||| |  | ||||||||||||||| ||||    
T  31957886 atgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcattttcccctccattcaatcccaaaat 31957973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 41744715 - 41744628
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||| | | ||| |||||||||||| ||||    
T  41744715 atgtttcatcagatgaaacagccacatgctccccctacacactattttcatcatcaacttcatttctaccaccattcaatcccaaaat 41744628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 41855306 - 41855451
Alignment:
Q  6 attgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagt 105  Q
    ||||||||||||||||| |||| ||  |||| | | ||||||  ||||||||||||   ||| |||||||||| |||  ||||||||||  |||||||||    
T  41855306 attgttgttgacacatttcatatggctgagaaacatgagtaaaatacgtttttgcctcctcggcagttaactgtcgaagaattcaaaaatcggctgcagt 41855405  T
Q  106 taactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtt 151  Q
    |||||| |||||||||||||||| ||||||| || | |||||||||    
T  41855406 taactgccgaggaaaacctcggtagttaactaccgagaaatatgtt 41855451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 41858260 - 41858143
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||||||||| |||| ||  |||| | ||||||||  |||||||||||||  ||| |||||||||| |||  ||||||||||| |||||    
T  41858260 gagaattgttgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactggcgaagaattcaaaaaccggctg 41858161  T
Q  102 cagttaactgtcgaggaa 119  Q
    |||||||||| |||||||    
T  41858160 cagttaactgccgaggaa 41858143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 43690020 - 43689938
Alignment:
Q  118 aaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||||||||||  ||||||||||||||| ||||||| |||| |||||| ||||||||| |||||||||| ||||||||||||||    
T  43690020 aaaacctcgggagttaactgccaaaaattatgttttatcatatgaaataaccacctgttccccctacacactattttcatcat 43689938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 38873002 - 38872927
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    ||||||||| ||||| |||| |||||| ||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  38873002 cagttaactaccgaggaatttaaaaaccggctgcagttaactgccgaggaaaacctcggtaattaactgccaaaaa 38872927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 42602400 - 42602531
Alignment:
Q  8 tgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagtta 107  Q
    |||||||||||| || |||| ||  |||| | ||||||||  ||| ||||||  |  ||| ||||||||||||||  ||||||||||| || ||||||||    
T  42602400 tgttgttgacacgtttcatatggctgagaaacacgagtaaaatacatttttgttctatcggcagttaactgccgaagaattcaaaaaccggatgcagtta 42602499  T
Q  108 actgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||||||||| ||||||||||    
T  42602500 actgccgaggaaaacctcggtagttaactgcc 42602531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 40077390 - 40077252
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||  ||||||  |||| | ||||||||  |||||||||||||  || || || ||||| | ||  ||| |||| | | ||    
T  40077390 agagaattgttgttgacacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcaacggtaaactgtcaaggtattaaaaatccgact 40077291  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  40077290 gcagttaactgccgaggaaaacctcggtagttaactgcc 40077252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 39751008 - 39751132
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||||||||||||||||| || ||| || ||||||||  |||||||||||||  | | || |||||||||||  ||||   |||| |||||    
T  39751008 gagaattgctgttgacacattgcataatgttgaggcacacgagtaaaatacgtttttgcccccttggcaattaactgccgatgaatt-tgaaaccggctg 39751106  T
Q  102 cagttaactgtcgaggaaaacctcgg 127  Q
    |||||||||| |||||||||||||||    
T  39751107 cagttaactgccgaggaaaacctcgg 39751132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 7340091 - 7340193
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||  |||||||  ||||||| |||||||||| |  || |||||||||| ||||||||| | |||||||||||||||| |||||    
T  7340091 aaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctacacactat 7340190  T
Q  192 ttt 194  Q
    |||    
T  7340191 ttt 7340193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 21406268 - 21406338
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||| |||| ||||||||||||||  |||||||||| ||||| ||||||||||    
T  21406268 cagttaactgccgaggaattcataaaccggctgcagttaactaccgaggaaaacttcggtagttaactgcc 21406338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 21800760 - 21800830
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||| |||| ||||||||||||||  |||||||||| ||||| ||||||||||    
T  21800760 cagttaactgccgaggaattcataaaccggctgcagttaactaccgaggaaaacttcggtagttaactgcc 21800830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 42605332 - 42605231
Alignment:
Q  43 agtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaa 142  Q
    ||||||||| |||||| |||  ||| |||||||||| |||  ||||||||||  ||||||||||||||| ||| |||||| ||||| |||||||||| ||    
T  42605332 agtaatttatgtttttaccccctcggcagttaactgtcgaagaattcaaaaatcggctgcagttaactgccgatgaaaacatcggtagttaactgccgaa 42605233  T
Q  143 aa 144  Q
    ||    
T  42605232 aa 42605231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 43377391 - 43377331
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgccc 62  Q
    |||||||||||||||||| ||||||||||  ||| || |||||||||||||||||||||||    
T  43377391 gagaattgttgttgacacgttgcataaggctgaggcacacgagtaatttacgtttttgccc 43377331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 44052366 - 44052226
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||  |||||| |||||||| | | || |||||||| | ||||||||||||  |||  |||||| ||||||| ||||   || | ||||    
T  44052366 agagaattgttgttcccacattacataaggttgtggcacacgagtaaatgacgtttttgccccctcggtagttaattgccgaggaatttgcaatccggct 44052267  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    ||||||| ||  |||||||||||||||| ||||||| ||||    
T  44052266 gcagttacctaccgaggaaaacctcggtagttaactaccaa 44052226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 39753137 - 39753050
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaatt 88  Q
    ||||||||||||||||||||||| ||||||   || || ||||||||||||| |||||| ||  ||| ||||||||||||||| ||||    
T  39753137 agagaattgttgttgacacattgtataaggctcaggcacacgagtaatttacatttttgtcccatcggcagttaactgccgaggaatt 39753050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 22551003 - 22550867
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||| |||||||  ||||||  | | || ||||||||||||| |   ||||| |||| ||||||||||||||    ||  ||| | |||||    
T  22551003 gagaattgttgtttacacatttgataaggctgtgccacacgagtaatttacctaaatgccc-ttcggcagttaactgccgaagttttagaaatccggctg 22550905  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  22550904 cagttaactgccgaggaaaacctcggtagttaactgcc 22550867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5300680 - 5300756
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaact 77  Q
    ||||||||||||||||||||||  ||||||| |||| | ||||||||  |||||||||| ||  |||||||||||||    
T  5300680 agagaattgttgttgacacatttgataaggttgagaaacacgagtaaaatacgtttttgtcccctcgacagttaact 5300756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 7172678 - 7172606
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaac 122  Q
    |||||||||||||  || |||||||||||||||||||||  ||||| ||||||| ||||||| |||| |||||    
T  7172678 tacgtttttgccccatcaacagttaactgccgagaaattttaaaaccggctgcaattaactgccgagaaaaac 7172606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 41743824 - 41743944
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||| |||| || |||||||| |   || ||||||| |||||  ||||||||  |||| |||||||||||||| ||||  ||| | |||||    
T  41743824 gagaattgttgtttacactttacataaggttgtaccacacgagtattttactcttttgccccctcgatagttaactgccgaggaatttgaaatccggctg 41743923  T
Q  102 cagttaactgtcgaggaaaac 122  Q
    |||||||||| ||| ||||||    
T  41743924 cagttaactgccgaagaaaac 41743944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 30305563 - 30305516
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactatttt 194  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  30305563 atgtttcatctgatgaaacaactacctgctccccctacacactatttt 30305516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 40740902 - 40740977
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||||| |  || || ||| ||||||||||||||| |||||||||| ||||  ||||||||||    
T  40740902 ttcgacagttaactgccgaaattttaaagaaccggctgcagttaactgccgaggaaaacttcggcagttaactgcc 40740977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 27412395 - 27412333
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcg 126  Q
    |||||||| | ||||||||| || || ||||| ||||| ||||||||||||||||||||||||    
T  27412395 ttcgacagcttactgccgaggaagtctaaaaccggctgtagttaactgtcgaggaaaacctcg 27412333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 41250211 - 41250074
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||  ||||||||||||||| | | || |||||||||| ||||||||||||  |||  ||||||||| |||    ||  ||| | | ||    
T  41250211 agagaattgttgttcccacattgcataaggttgtggcacacgagtaattgacgtttttgccc-ctcggtagttaactgtcgaagttttagaaatccgact 41250113  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||| |||| |||||||||||||| | ||||||||||    
T  41250112 gcagtttactgccgaggaaaacctcgatggttaactgcc 41250074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 3395837 - 3395942
Alignment:
Q  13 ttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgt 112  Q
    |||||||||| |||||||| ||| || || |||||  || ||||||||||  ||  ||||||||||||||| |||| ||||| ||  ||||||||||||     
T  3395837 ttgacacatttcataaggttgaggcacacaagtaaaatatgtttttgccccctcagcagttaactgccgaggaatttaaaaattgattgcagttaactgc 3395936  T
Q  113 cgagga 118  Q
    ||||||    
T  3395937 cgagga 3395942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 20549368 - 20549251
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||| |||| || |||||||| | | || ||||||| |||||  ||||||||  ||| ||||||||||||||| ||||  |||   ||||||||    
T  20549368 aattgttgtttacactttacataaggttgtgccacacgagtattttactcttttgccccctcggcagttaactgccgaggaatttgaaattcggctgcag 20549269  T
Q  105 ttaactgtcgaggaaaac 122  Q
    ||||||  ||||||||||    
T  20549268 ttaactaccgaggaaaac 20549251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 32378961 - 32378868
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactatttt 194  Q
    ||||||||||  |||||||  ||||||| |||||||||| |   | |||||||||  ||||||||| | |||||||||||||||| ||||||||    
T  32378961 gcagttaactaccgaggaattcctcggtagttaactgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactatttt 32378868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 32432916 - 32432823
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactatttt 194  Q
    ||||||||||  |||||||  ||||||| |||||||||| |   | |||||||||  ||||||||| | |||||||||||||||| ||||||||    
T  32432916 gcagttaactaccgaggaattcctcggtagttaactgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactatttt 32432823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 35962289 - 35962378
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||||||||  ||| |||||||||| |||| ||||  ||| | |||| |||||||||| |||||||||||||||  ||||||||||    
T  35962289 tacgattttgccctctcggcagttaactgtcgaggaatttgaaatccggctacagttaactgccgaggaaaacctcgggagttaactgcc 35962378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 36677978 - 36677929
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||||    
T  36677978 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgccaa 36677929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 41016445 - 41016485
Alignment:
Q  99 ctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  41016445 ctgcagttaactgccgaggaaaacctcggtagttaactgcc 41016485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 184601 - 184554
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  184601 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 184554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 8419428 - 8419475
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  8419428 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 8419475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 28646319 - 28646252
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    ||||||| ||||||| |||| |||||  ||||||||||||||| |||||||||| ||||  |||||||    
T  28646319 cagttaattgccgaggaatttaaaaatcggctgcagttaactgccgaggaaaacttcggcagttaact 28646252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 28650903 - 28650836
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    ||||||| ||||||| |||| |||||  ||||||||||||||| |||||||||| ||||  |||||||    
T  28650903 cagttaattgccgaggaatttaaaaatcggctgcagttaactgccgaggaaaacttcggcagttaact 28650836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 32375675 - 32375722
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  32375675 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 32375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 39601676 - 39601775
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||| | |||||||| ||   ||||||||||||||||||    ||  ||| | ||||||||||||||| |||||||||||||||  ||||||||||    
T  39601676 acgagtaaatgacgtttttaccttctcgacagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgcc 39601775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 21835251 - 21835181
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| || |||| |||||| |||| ||||||||||||||  |||||||||| |||||  |||||||||    
T  21835251 cagttaaatgtcgaggaattcataaaccggctgcagttaactaccgaggaaaacttcggtatttaactgcc 21835181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 26451509 - 26451551
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  26451509 ggctgtagttaactgccgaggaaaacctcggtagttaactgcc 26451551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 26663073 - 26663035
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  26663073 gcagttaactgccgaggaaaacctcggtagttaactgcc 26663035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 32383249 - 32383207
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||  |||||||||||||||| ||||||||||    
T  32383249 ggctgcagttaactaccgaggaaaacctcggtagttaactgcc 32383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 32437204 - 32437162
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||  |||||||||||||||| ||||||||||    
T  32437204 ggctgcagttaactaccgaggaaaacctcggtagttaactgcc 32437162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 34366940 - 34366982
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||  |||||||||||||||| ||||||||||    
T  34366940 ggctgcagttaacttccgaggaaaacctcggtagttaactgcc 34366982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 34503197 - 34503147
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttac 52  Q
    |||||||||||||||||||||||||||||  | | || |||||||||||||    
T  34503197 gagaattgttgttgacacattgcataagggtgtgtcacacgagtaatttac 34503147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 268
Target Start/End: Original strand, 35389410 - 35389440
Alignment:
Q  238 agttttaatgctgcaaactagaaagaaaaaa 268  Q
    |||||||||||||||||||||||||||||||    
T  35389410 agttttaatgctgcaaactagaaagaaaaaa 35389440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 45133317 - 45133275
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||  |||||||||| ||||||||||||||||    
T  45133317 ggctgcagttaactaccgaggaaaacttcggttgttaactgcc 45133275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 15033222 - 15033149
Alignment:
Q  67 gacagttaactgccgagaaattcaaaaact-ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||| |  || ||||| | ||||||| ||||||| ||||| |||||||||| ||||||||||    
T  15033222 gacagttaactgccgaaattttgaaaaattcggctgcaattaactgccgagggaaacctcggtagttaactgcc 15033149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 43262451 - 43262492
Alignment:
Q  98 gctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||| |||||||||| ||||| ||||||||||    
T  43262451 gctgcagttaactgccgaggaaaacttcggtagttaactgcc 43262492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 13783188 - 13783112
Alignment:
Q  61 ccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||| |||||||||| ||| |  || || ||| ||||||||||||||| |||||||||| ||||  ||||||||    
T  13783188 ccattcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgccgaggaaaacttcggcagttaactg 13783112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 22014270 - 22014314
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    |||| ||| ||||||||||| |||||||||||||||| |||||||    
T  22014270 aaaccggcggcagttaactgccgaggaaaacctcggtagttaact 22014314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 30970243 - 30970187
Alignment:
Q  65 tcgacagttaactgccgagaaattca-aaaactggctgcagttaactgtcgaggaaa 120  Q
    |||||| ||||||||||||||||||| ||||| ||  |||||||| |||||||||||    
T  30970243 tcgacacttaactgccgagaaattcaaaaaaccggtggcagttaagtgtcgaggaaa 30970187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 38135681 - 38135629
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaa 121  Q
    ||||||||||||||| |||| | |||| ||||||||||||||  |||||||||    
T  38135681 cagttaactgccgaggaatttataaaccggctgcagttaactaccgaggaaaa 38135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 43188006 - 43188126
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||  ||||||  ||||||  |||| | ||||||||  |||| ||||||||  ||||||||||| || |||| |||| |||| | ||||    
T  43188006 agagaattgttgttctcacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcgacagttaattgtcgaggaattaaaaatccggct 43188105  T
Q  101 -gcagttaactgtcgaggaaa 120  Q
     | ||||||||| ||||||||    
T  43188106 ggtagttaactgccgaggaaa 43188126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 6e-65; HSPs: 100)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 7837525 - 7837765
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaa-ctgccgaga--aattcaaaaactg 97  Q
    ||||||||||||||||||||||||||||||  |||||| || ||||||||| |||||| |||  ||||||||||| |||||||||  | ||||||||| |    
T  7837525 agagaattgttgttgacacattgcataaggctgagacacacaagtaatttaagttttttccccctcgacagttaaactgccgagaggatttcaaaaaccg 7837624  T
Q  98 gctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcat 197  Q
    |||||||||||||  | || ||| | ||||| |||||||||  |  |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  7837625 gctgcagttaactacccagaaaatcttcggtagttaactgctgaggaatatgtttcatcagatgaaacagtcacctgctccccctacatactattttcat 7837724  T
Q  198 catcaacttcaataccacctccattcaatccccaaattcaa 238  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  7837725 catcaacttcaataccacctccattcaatctccaaattcaa 7837765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 29929363 - 29929592
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||||||||||||  ||||||  ||| || || |||||  || | |||||| |  ||||||||||||||  ||| ||||||||||| |||||||     
T  29929363 aattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaaccggctgcaa 29929462  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||||| |||||||||||||| | |||||||||| | ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||    
T  29929463 ttaactgccgaggaaaacctcgatagttaactgccgagaaatatgtttcatcatatgaaacagtcacctgctccccctacacactattttcatcatcaac 29929562  T
Q  205 ttcaataccacctccattcaatccccaaat 234  Q
    ||| ||||||| || || ||||||||||||    
T  29929563 ttccataccacttctatccaatccccaaat 29929592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 29978517 - 29978746
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||||||||||||  ||||||  ||| || || |||||  || | |||||| |  ||||||||||||||  ||| ||||||||||| |||||||     
T  29978517 aattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaaccggctgcaa 29978616  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||||| |||||||||||||| | |||||||||| | ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||    
T  29978617 ttaactgccgaggaaaacctcgatagttaactgccgagaaatatgtttcatcatatgaaacagtcacctgctccccctacacactattttcatcatcaac 29978716  T
Q  205 ttcaataccacctccattcaatccccaaat 234  Q
    ||| ||||||| || || ||||||||||||    
T  29978717 ttccataccacttctatccaatccccaaat 29978746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 238
Target Start/End: Complemental strand, 28611236 - 28611004
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||| || ||||||| |||||||  |||||| || |||||  ||   ||||||||  ||| ||||||||||||||||||||||||||| ||||||||    
T  28611236 aattgttctttacacatttcataaggctgagacacacaagtaaaatataattttgccccctcggcagttaactgccgagaaattcaaaaaccggctgcag 28611137  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||||| ||||||||||  |||| |||||||||| | || |||||||||||| || ||||| |||  ||||||||||||| |||| |||||||||||||    
T  28611136 ttaactgccgaggaaaacaacggtagttaactgccgagaattatgtttcatcaaataaaacagccagatgctccccctacacacta-tttcatcatcaac 28611038  T
Q  205 ttcaataccacctccattcaatccccaaattcaa 238  Q
    ||| ||||||| ||||| ||| ||| ||||||||    
T  28611037 ttccataccacttccatccaaacccaaaattcaa 28611004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 29918477 - 29918248
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||| ||| |||||||  ||| || |  |||||  |||| ||||| ||  ||| || |||||||||||  ||||| ||||| ||||||||    
T  29918477 aattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctgcag 29918378  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||||| |||||||||||||| | |||||||||| | ||||||||||  ||| ||||||||  ||||||||||||||||| |||||||||||||| |||    
T  29918377 ttaactgccgaggaaaacctcgttagttaactgccgagaaatatgttttctcatatgaaacagtcacctgctccccctacacactattttcatcattaac 29918278  T
Q  205 ttcaataccacctccattcaatccccaaat 234  Q
    ||| ||||||| ||||| ||||||||||||    
T  29918277 ttccataccacttccatccaatccccaaat 29918248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 29967630 - 29967401
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||| ||| |||||||  ||| || |  |||||  |||| ||||| ||  ||| || |||||||||||  ||||| ||||| ||||||||    
T  29967630 aattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctgcag 29967531  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||||| |||||||||||||| | |||||||||| | ||||||||||  ||| ||||||||  ||||||||||||||||| |||||||||||||| |||    
T  29967530 ttaactgccgaggaaaacctcgttagttaactgccgagaaatatgttttctcatatgaaacagtcacctgctccccctacacactattttcatcattaac 29967431  T
Q  205 ttcaataccacctccattcaatccccaaat 234  Q
    ||| ||||||| ||||| ||||||||||||    
T  29967430 ttccataccacttccatccaatccccaaat 29967401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 48251008 - 48250777
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  |||||| |||||||| | | || |  | ||| | ||||||||||||  ||| ||||||||||| ||| ||||  ||  | |||||    
T  48251008 gagaattgttgttcccacattacataaggttgtgccacataaataaatgacgtttttgccccctcggcagttaactgctgaggaatttgaattccggctg 48250909  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatc 201  Q
    |||||||||| |||||||||||||||  |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| ||||||||| |||||    
T  48250908 cagttaactgccgaggaaaacctcgggagttaactgccgagaaa-atgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatc 48250810  T
Q  202 aacttcaataccacctccattcaatccccaaat 234  Q
    ||||||| |  ||||||||||||||||| ||||    
T  48250809 aacttcatttacacctccattcaatcccaaaat 48250777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 9429921 - 9429756
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||| ||||  |||  ||||||||||||| |  |||||||||||||||| |||||||||| |  || |||||||||| |||||||||||    
T  9429921 cagttaactgccgaggaatttgaaatttggctgcagttaagtaccgaggaaaacctcggtagttaactgccgaggaaaatgtttcatccgatgaaacaac 9429822  T
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
     |||||||||||||||| ||| ||||| |||||| ||||| | |||||||||||||||||| ||||    
T  9429821 tacctgctccccctacacactgttttcttcatcaccttcatttccacctccattcaatcccaaaat 9429756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 6505988 - 6505879
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccc-tacatactattttcatcatcaacttcaataccacctccattcaatcc 228  Q
    |||||||||| |  ||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  6505988 gttaactgccgaggaatatgtttcatcagatgaaacagccacatgctcccccctacatactattttcatcatcaacttcaataccaccttcagtcaatcc 6505889  T
Q  229 ccaaattcaa 238  Q
    ||||||||||    
T  6505888 ccaaattcaa 6505879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 14398468 - 14398700
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||||||||| |||| || |||||||  | | || ||||||| |||||| ||||  |   ||| | ||||||||||||| ||||  ||  | ||||    
T  14398468 agagaattgttgtttacactttacataaggctgtgtcacacgagtattttacgattttatctcctcggcggttaactgccgaggaatttgaattccggct 14398567  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||||||||||| ||||| || ||||||  |||||||| | |  || |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  14398568 gcagttaactgccgagggaatcctcggaagttaactgtcgaggaa-atgtttcatcagatgaaacagccacctgctccccctacacactattttcttcat 14398666  T
Q  201 caacttcaataccacctccattcaatccccaaat 234  Q
    |||||||| | |||||||||||||||||| ||||    
T  14398667 caacttcatttccacctccattcaatcccaaaat 14398700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 9582546 - 9582659
Alignment:
Q  67 gacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaaca 166  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| |||| ||||| |||   |||||||||| ||||| ||||||||||||||||||||    
T  9582546 gacagttaactgccgagaaattcaaaaaccgactgcagttaactgccgagaaaaacttcgtcagttaactgccgaaaaaaatgtttcatcagatgaaaca 9582645  T
Q  167 accacctgctcccc 180  Q
     |||||||||||||    
T  9582646 gccacctgctcccc 9582659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 13747790 - 13747626
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||  ||||  ||| | |||||||||||||||  ||||||||||||| | |||||||||| |  || |||||||||| ||||||||| |    
T  13747790 cagttaactgccgatgaatttgaaatccggctgcagttaactgctgaggaaaacctcg-tagttaactgccgaggaaaatgtttcatccgatgaaacagc 13747692  T
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||  |||||||| |||||| ||||| | |||||||||||||||||| ||||    
T  13747691 cacctgctccccctacactctattttcttcatcaccttcatttccacctccattcaatcccaaaat 13747626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 7247999 - 7247864
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||| ||||||  ||| || |||| |||  |||| ||||||||  ||| ||||||||||||||| ||||||| ||| |||||    
T  7247999 gagaattgttgttgacacattggataaggctgaggcacacgaataaaatacgcttttgccccctcggcagttaactgccgaggaattcaataaccggctg 7247900  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    |||||||||| |||||||||||||||| ||||||||    
T  7247899 cagttaactgacgaggaaaacctcggtagttaactg 7247864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 36817565 - 36817421
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttca 196  Q
    |||||||||||||| ||||||||| ||||||| |||||||||| |  || |||||||||| ||||||||| ||||||||||||| |||| |||||||||     
T  36817565 ggctgcagttaactatcgaggaaatcctcggtagttaactgccgaggaa-atgtttcatcggatgaaacagccacctgctcccc-tacacactattttct 36817468  T
Q  197 tcatcaacttcaataccacctccattcaatccccaaattcaagtttt 243  Q
    |||||| ||||| | |||||||||||||||||| |||| ||| ||||    
T  36817467 tcatcaccttcatttccacctccattcaatcccaaaatccaattttt 36817421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 41802939 - 41803069
Alignment:
Q  9 gttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaa 108  Q
    ||||| |||||||| |||| ||  |||| ||||||||||  |||||||||||||| ||| ||||||||||||||  |||| |||||| ||||||||||||    
T  41802939 gttgtcgacacatttcatatggctgagaaatacgagtaaaatacgtttttgcccactcggcagttaactgccgaagaatttaaaaaccggctgcagttaa 41803038  T
Q  109 ctgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||| |||||||||||||||| ||||||||||    
T  41803039 ctgccgaggaaaacctcggtagttaactgcc 41803069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 55267375 - 55267481
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||||  ||||||||||||||||||  ||||||||||  |||||    
T  55267375 gagaattgttgttgacacgttgcataaggctgagacacacgagtaatttacgtttttgccccctcgacagttaactgccgaagaattcaaaaatcggctg 55267474  T
Q  102 cagttaa 108  Q
    |||||||    
T  55267475 cagttaa 55267481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 46993225 - 46993138
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| | |||||||||||||||||| ||||    
T  46993225 atgtttcatcagatgaaacagccacctgctccccttacatattattttcatcatcaacttcatttccacctccattcaatcccaaaat 46993138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 7843089 - 7842924
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||||||||  ||  | | |||||||||||||  |||||||   ||||  ||||||| || |  || |||||||||| ||||||||| |    
T  7843089 cagttaactgccgagaaatttgaattccgactgcagttaactgcagaggaaattatcgggcgttaacttccgaggaaaatgtttcatcggatgaaacagc 7842990  T
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||| |||||| | |||||||||||||||||||| | |||||||||||||||||| ||||    
T  7842989 cacctgctcctcctacacattattttcatcatcaacttcatttccacctccattcaatcccaaaat 7842924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 46989480 - 46989617
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||||||||| |||||||  ||||||| | | ||||||||||| | ||||||||||||  ||| ||||||||| ||||||||||  ||  | ||||    
T  46989480 agagaattgttgtttacacatttaataaggttgtgtcatacgagtaaatgacgtttttgccctctcggcagttaactaccgagaaatttgaattccggct 46989579  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  46989580 gcagttaactgccgaggaaaacctcggtagttaactgc 46989617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 6489267 - 6489400
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||  ||| ||||    ||||||| |||| | |||| |||||    
T  6489267 gagaattgctgttgacacattgcataaggttgaggcacacaagtaatttacgtttttgccccctcggcagt----tgccgaggaattaagaaaccggctg 6489362  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||||||| ||||||| ||||||||||    
T  6489363 cagttaactgccgaggaaatcctcggtagttaactgcc 6489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 23443127 - 23443052
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccatt 222  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| | |||||||||||    
T  23443127 atgtttcatcagatgaaacaaccacctgctccccctacacactattttcttcatcaacttcatttccacctccatt 23443052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 2433082 - 2432940
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||||||||||  ||| || ||||||||  |||| ||||  ||  ||| |||||||||| |||| ||||||| ||| || |     
T  2433082 gagaattgttgttgacacattgcataaggctgaggcacacgagtaaaatacgcttttatcccctcggcagttaactgtcgaggaattcaataaccggata 2432983  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||    
T  2432982 cagttaactgtcgaggaaaaccttggtagttaactgccgaaaa 2432940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 19454464 - 19454348
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||  |||| ||||||||  ||| ||||||||||| ||| ||||||||||  || ||    
T  19454464 gagaattgttgttgatacattgcataaggttgagacacacgagtaaaatacgcttttgccctctcggcagttaactgctgaggaattcaaaaatcggttg 19454365  T
Q  102 cagttaactgtcgagga 118  Q
    |||||||||| ||||||    
T  19454364 cagttaactgccgagga 19454348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 11380374 - 11380512
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||   | |||  |||| | ||||||||  ||||||||||||| |||| ||||||||||||||| |||| ||||  ||| |    
T  11380374 agagaattgttgttgacacatttggttaggctgagaaacacgagtaaaatacgtttttgccccttcggcagttaactgccgaggaattaaaaatatggtt 11380473  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||| ||||||||| ||| ||||||    
T  11380474 gcagttaactgccgaggataacctcggtagtttactgcc 11380512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 19440257 - 19440339
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtt 151  Q
    ||||||||||||||  |||||| |||| ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  19440257 cagttaactgccgaagaattcataaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaaaaatatgtt 19440339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 41579863 - 41579721
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||| ||||||||||  ||| || |  |||||  |||| |||| |||  ||| ||||||| ||| ||| ||||||| ||| |||||    
T  41579863 gagaattgttgttgacacgttgcataaggctgaggcacataagtaaaatacgatttttccccctcggcagttaattgctgaggaattcaataaccggctg 41579764  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    |||||||||| |||||||||||||||| |||||||||| ||||    
T  41579763 cagttaactgccgaggaaaacctcggtagttaactgccgaaaa 41579721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 41805815 - 41805665
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||||||| |||||||||||||||||  ||| || || ||||||||||||||||||    ||| |||||||||| |||  |||| ||| || ||||    
T  41805815 agagaattgttgatgacacattgcataaggctgaggcacacaagtaatttacgtttttgcttcctcggcagttaactgtcgaagaatttaaagaccggct 41805716  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtt 151  Q
    ||| ||||||| |||||||||||||||  ||||| || | |||||||||||    
T  41805715 gcaattaactgccgaggaaaacctcgggagttaattgtcgaaaaatatgtt 41805665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 46344871 - 46345003
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||||||| |||| ||||||| ||| || || |||||  ||  |||||||||  ||| |||||||||| |||| ||||||||||  |||||    
T  46344871 gagaattgatgttgacaaattggataaggttgaggcacacaagtaaaatatttttttgccccctcggcagttaactgtcgaggaattcaaaaatcggctg 46344970  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaa 134  Q
    |||||||||| |||||||||||||||| |||||    
T  46344971 cagttaactgccgaggaaaacctcggtagttaa 46345003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 55385074 - 55385206
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||||  ||||||||||||||| | | || |||||||||| ||||||||||||  ||| ||||||||||||||    ||  ||| | ||||||||    
T  55385074 aattgttgttcccacattgcataaggttgtggcacacgagtaattgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctgcag 55385173  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||| |||||||||||||||| ||||||||    
T  55385174 ttaactgccgaggaaaacctcggtagttaactg 55385206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 11389647 - 11389569
Alignment:
Q  160 tgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaa 238  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||||||| | |||||||||||||||| | ||||||||    
T  11389647 tgaaacaaccacttgctccctctacatactattttcttcatcaacttcatttccacctccattcaatctcaaaattcaa 11389569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 41577008 - 41577146
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||||||||||||||||| |||||||  |||| |||| | |||  ||||||||||||  ||||||||||||||| |||  |||| |||||  || |    
T  41577008 agagaattgttgttgacacatttcataaggctgagaaatacaaataaaatacgtttttgccttttcgacagttaactgtcgatgaattaaaaaatcggtt 41577107  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||  ||||| ||||| || |||||||    
T  41577108 gcagttaactgtcgacaaaaacttcggtagtaaactgcc 41577146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 52570701 - 52570568
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||| |||||||||||||||||||  ||| || |||| |||  ||||||||| ||| | || ||||||||||||||  ||||||||||| | ||||||    
T  52570701 aattgtcgttgacacattgcataaggctgaggcacacgattaaaatacgttttttcccct-cggcagttaactgccgaagaattcaaaaaccgactgcag 52570603  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||  |||| ||||||||||| ||||||||||    
T  52570602 ttaactaccgagaaaaacctcggtagttaactgcc 52570568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 52567697 - 52567846
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||| || ||||||||||  ||| || ||||||||  |||| |||||||   ||| ||||||||||||||  ||||||||||  |||||    
T  52567697 gagaattgttgttgatacgttgcataaggctgaggcacacgagtaaaatacgattttgccttctcggcagttaactgccgaataattcaaaaatcggctg 52567796  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtt 151  Q
    || ||||||| |||| ||||| | ||| |||||||||| | |||||||||    
T  52567797 cacttaactgccgagaaaaacttaggtagttaactgccgagaaatatgtt 52567846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 2745225 - 2745165
Alignment:
Q  148 tgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  2745225 tgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttca 2745165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 13897004 - 13896878
Alignment:
Q  13 ttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgt 112  Q
    |||| |||||||||||||   ||||| ||||||||  || ||||||| |   ||| ||||||| ||| ||  |||| || ||||||||||||||||||||    
T  13897004 ttgatacattgcataaggctaagacacacgagtaaaatatgtttttgactcctcggcagttaattgctgaagaatttaataactggctgcagttaactgt 13896905  T
Q  113 cgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||| ||||||||||    
T  13896904 cgaggaaaacctcggtagttaactgcc 13896878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 34691626 - 34691696
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| || | |||| | |||||||||||||||||||||||||||||||| ||||||||||    
T  34691626 cagttaactgccgaggaaataaaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgcc 34691696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 50953357 - 50953415
Alignment:
Q  150 tttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  50953357 tttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttca 50953415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 55207803 - 55207665
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||| |||||||||||| |||| ||  |||| | ||||||||  |||  ||||||||  ||| ||||||||||||||  ||||||||||| || |    
T  55207803 agagaattgatgttgacacatttcatatggctgagaaacacgagtaaaatactcttttgccccatcggcagttaactgccgaagaattcaaaaaccggtt 55207704  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| | |||| ||||| ||| ||||||||||    
T  55207703 gcagttaactgcctaggacaaccttggtagttaactgcc 55207665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 7839600 - 7839503
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||||||||||  ||| |||| ||||| |||| ||||||||||| ||||||||||||||  |||||  | ||||||| ||||||||||    
T  7839600 acgagtaatttacgtttttgccccctcggcagtaaactgtcgaggaattcaaaaaccggctgcagttaactaccgagg--atcctcggtagttaactgcc 7839503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 20918148 - 20918013
Alignment:
Q  4 gaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccat-tcgacagttaactgccgagaaattcaaaaactggctgc 102  Q
    |||||||||||||||||||  ||||||  |||| ||||| ||||  ||| |||||||||   |||||| |||||||||||  |||| |||| | |||| |    
T  20918148 gaattgttgttgacacatttgataaggctgagaaatacg-gtaaaatacatttttgcccccctcgacaattaactgccgatgaattaaaaatccggctac 20918050  T
Q  103 agttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  20918049 agttaactgccgaggaaaacctcggtagttaactgcc 20918013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 20927110 - 20926975
Alignment:
Q  4 gaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccat-tcgacagttaactgccgagaaattcaaaaactggctgc 102  Q
    |||||||||||||||||||  ||||||  |||| ||||| ||||  ||| |||||||||   |||||| |||||||||||  |||| |||| | |||| |    
T  20927110 gaattgttgttgacacatttgataaggctgagaaatacg-gtaaaatacatttttgcccccctcgacaattaactgccgatgaattaaaaatccggctac 20927012  T
Q  103 agttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  20927011 agttaactgccgaggaaaacctcggtagttaactgcc 20926975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 30256074 - 30256006
Alignment:
Q  70 agttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    |||||||||||||| |||| |||||| ||||||||||||||| |||||||||||||| | |||||||||    
T  30256074 agttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaacctcgatagttaactgc 30256006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 16444672 - 16444735
Alignment:
Q  145 atatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||| ||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||    
T  16444672 atatatttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttca 16444735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32060352 - 32060277
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaac 76  Q
    ||||||||||| || |||||||||||||||  ||| ||||||||||||||||||||||| ||| |||| |||||||    
T  32060352 agagaattgtttttaacacattgcataaggctgaggcatacgagtaatttacgtttttgtccactcgatagttaac 32060277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 55205270 - 55205349
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgcc 80  Q
    ||||||||| ||||||||||||||||||||  ||| |||| |||||||||||||||||| ||  ||| ||||||||||||    
T  55205270 agagaattgatgttgacacattgcataaggctgaggcatatgagtaatttacgtttttgtcccctcggcagttaactgcc 55205349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 42756092 - 42756230
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||| |||||||||||||||||  |||||||  ||| | | ||||||  |||||||||||||  ||  |||||||||| |||| |||| |||| | || |    
T  42756092 agaggattgttgttgacacatttgataaggttcagaaacatgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaattaaaaatccggtt 42756191  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| ||||||||||||||   ||||||||||    
T  42756192 gcagttaactgccgaggaaaacctcgagagttaactgcc 42756230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 43476125 - 43476263
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaa-ctggct 100  Q
    |||||||||||||  |||||| |||||||| | | || |||||||| | ||||||||||||  |||  |||||||||||||    ||  |||| | ||||    
T  43476125 gagaattgttgttctcacattacataaggttgtgccacacgagtaaatgacgtttttgccccctcggaagttaactgccgaagttttagaaaatccggct 43476224  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  43476225 gcagttaactgccgaggaaaacctcggtagttaactgcc 43476263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 50216993 - 50216879
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||||||  ||||||| | | || |||||||||| ||||||||||||  | | ||||||||||||||| |||| |||| | |||||    
T  50216993 gagaattgttgttcccacatttgataaggttgtggcacacgagtaattgacgtttttgccccattggcagttaactgccgaggaattaaaaatccggctg 50216894  T
Q  102 cagttaactgtcgag 116  Q
    |||||||||| ||||    
T  50216893 cagttaactgccgag 50216879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 600683 - 600546
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||||||| | ||||  | | || |||||||| | |||||||||| |  ||||||||||||||||||    ||  ||| | ||| |    
T  600683 gagaattgttgttcccacattgtagaaggctgcggcacacgagtaaatgacgtttttgcgccctcgacagttaactgccgaagttttggaaatccggccg 600584  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  600583 cagttaactgtcgaggaaaacctcggtagttaactgcc 600546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 6506090 - 6505973
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||  ||||||||||||| ||||||  ||| || |||||||||||||||||||| ||  ||   ||||||||||| || |||| | |||| |||||    
T  6506090 gagaattactgttgacacattgtataaggctgaggcacacgagtaatttacgtttttgtcccctcagaagttaactgccaaggaattaagaaaccggctg 6505991  T
Q  102 cagttaactgtcgaggaa 119  Q
    |||||||||| |||||||    
T  6505990 cagttaactgccgaggaa 6505973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 19341695 - 19341596
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||| ||||||||||| ||  ||| ||||||||||||||| ||||  ||| | ||||||||||||||  |||||||||| ||||  ||||||||||    
T  19341695 acgagtaagttacgtttttgtcccctcggcagttaactgccgaggaattagaaatccggctgcagttaactaccgaggaaaacttcggcagttaactgcc 19341596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 66841 - 66942
Alignment:
Q  8 tgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagtta 107  Q
    |||||||||||||||  ||||||  |||||| ||||||||  |||| ||||||||  ||| |||||||||||||||  |||| ||||| |||||||||||    
T  66841 tgttgttgacacatttgataaggctgagacacacgagtaaaatacgcttttgccccctcggcagttaactgccgaggtattc-aaaaccggctgcagtta 66939  T
Q  108 act 110  Q
    |||    
T  66940 act 66942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 2743399 - 2743469
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||||||||||  ||||||||||    
T  2743399 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgcc 2743469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 21956224 - 21956138
Alignment:
Q  122 cctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    ||||||| |||||||| | |  || ||||||||||||||||||||  ||||||| |||||||||||||||||||   ||||||||||    
T  21956224 cctcggtagttaactgtcgaggaaaatgtttcatcagatgaaacagtcacctgcaccccctacatactattttctctatcaacttca 21956138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 30947702 - 30947600
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||  |||||||  ||||||| |||||||||| |   | |||||||||| ||||||||| | |||||||||||||||| |||||    
T  30947702 aaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgagggaaatgtttcatccgatgaaacagctacctgctccccctacacactat 30947603  T
Q  192 ttt 194  Q
    |||    
T  30947602 ttt 30947600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 48246441 - 48246483
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  48246441 ggctgcagttaactgtcgaggaaaacctcggtagttaactgcc 48246483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 48888747 - 48888813
Alignment:
Q  75 actgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    ||||||||| |||| |||| | ||||||||||||||| ||||||||| |||||| ||||||||||||    
T  48888747 actgccgaggaattaaaaatccggctgcagttaactgccgaggaaaatctcggtagttaactgccaa 48888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 51402537 - 51402400
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||||||||||| |||| ||  |||| | ||||||||  |||||||||||    ||  ||||||| ||| ||  ||||||||||  |  ||    
T  51402537 gagaattgatgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgcttcctcagcagttaattgcagaataattcaaaaatcgattg 51402438  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
     |||||||||||||||||||||||||| ||||||||||    
T  51402437 tagttaactgtcgaggaaaacctcggtagttaactgcc 51402400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 2062409 - 2062457
Alignment:
Q  91 aaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  2062409 aaaactggctgcagttaactgtcgaggaaaacttcggcagttaactgcc 2062457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 2647777 - 2647701
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaa-ctggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||||||| |  || ||||| | ||||||||||||||| |||||||||||||||| ||||||||||    
T  2647777 ttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgcc 2647701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 30943213 - 30943260
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  30943213 aaactggcggcagttaactgccgaggaaaacctcggtagttaactgcc 30943260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 16647286 - 16647168
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  |||||||||||||||   | || ||||||| || ||||||||||||  ||| ||||||||||||||    ||  ||| | |||||    
T  16647286 gagaattgttgttcccacattgcataaggttctggcacacgagtacttgacgtttttgccccctcggcagttaactgccgatgttttagaaatccggctg 16647187  T
Q  102 cagttaactgtcgaggaaa 120  Q
    |||||||||| ||||||||    
T  16647186 cagttaactgccgaggaaa 16647168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 34049109 - 34049151
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  34049109 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 34049151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 43478970 - 43478832
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||  |||||| |||||||| | | || |||||||| | | ||||||| ||  ||| ||||||||||| ||    ||  ||| | ||||    
T  43478970 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgatgtttttgtcccctcggcagttaactgctgaagttttagaaatccggct 43478871  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||| ||||| ||||||||||    
T  43478870 gcagttaactgccgaggaaaacttcggtagttaactgcc 43478832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 43571821 - 43571715
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| ||||||||  ||  | || |||||  || ||||||||||  ||| ||||||||||| ||| |||||||||   ||||||||    
T  43571821 aattgttgttgacacattacataaggttcaggtacacaagtaaaatatgtttttgccccctcggcagttaactgctgaggaattcaaaagtcggctgcag 43571722  T
Q  105 ttaactg 111  Q
    |||||||    
T  43571721 ttaactg 43571715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 49219862 - 49219796
Alignment:
Q  70 agttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    |||||||||||||| ||||  ||| | ||||||||||||||| |||||||||||| ||| |||||||    
T  49219862 agttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaaaccttggtagttaact 49219796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 54389824 - 54389866
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  54389824 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 54389866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 4002643 - 4002507
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||| |||| || |||||||  | | || ||||||| |||||  |||||||| | || ||||||||| | ||| ||||  ||| | |||||    
T  4002643 gagaattgctgtttacactttacataaggctgtgccacacgagtattttactcttttgcccct-cggcagttaactactgaggaatttgaaatccggctg 4002545  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||||||||||||||  ||||||||||    
T  4002544 cagttaactgccgaggaaaacctcgggagttaactgcc 4002507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 14403109 - 14402989
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||| |||| || |||||||  | | || ||||||| |||||  ||||||||  ||| ||||||||||||||| ||||  ||| | ||| |    
T  14403109 gagaattgttgtttacactttacataaggctgtgccacacgagtattttactcttttgccccctcggcagttaactgccgaggaatttgaaatccggcgg 14403010  T
Q  102 cagttaactgtcgaggaaaac 122  Q
     ||||||||| ||||||||||    
T  14403009 tagttaactgccgaggaaaac 14402989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 45101984 - 45101872
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||| |||||||| |||||||| ||| || |  |||||  |||||||||  ||  ||| ||||||| ||  ||| ||||||||||| ||||||||    
T  45101984 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacgtttttatcccctcggcagttaattgttgaggaattcaaaaaccggctgcag 45101885  T
Q  105 ttaactgtcgagg 117  Q
    ||||||| |||||    
T  45101884 ttaactgccgagg 45101872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 1293401 - 1293448
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||| ||||||||||| |||||||||||||||  ||||||||||    
T  1293401 aaactggcggcagttaactgccgaggaaaacctcgggagttaactgcc 1293448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 3501944 - 3501897
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  3501944 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 3501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 41844413 - 41844366
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  41844413 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 41844366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 3948753 - 3948855
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||  |||||||  |||| || |||||||||| |   | |||||||||| ||||||||  | |||||||||||||||| |||||    
T  3948753 aaaccggcggcagttaactaccgaggaattcctcagtagttaactgccgagggaaatgtttcatccgatgaaactgctacctgctccccctacacactat 3948852  T
Q  192 ttt 194  Q
    |||    
T  3948853 ttt 3948855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 4004847 - 4004805
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| ||||||||||||||||  |||||||||    
T  4004847 ggctgcagttaactgccgaggaaaacctcggtacttaactgcc 4004805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 8475850 - 8475896
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    |||| ||| ||||||||||| |||||||||||||||| |||||||||    
T  8475850 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgc 8475896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 20366193 - 20366235
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactg 111  Q
    ||||||||||||||| |||||||||||  ||||||||||||||    
T  20366193 cagttaactgccgaggaattcaaaaaccagctgcagttaactg 20366235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 35743622 - 35743584
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  35743622 gcagttaactgccgaggaaaacctcggtagttaactgcc 35743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 36812770 - 36812908
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaa-ctggct 100  Q
    |||||||| |||| |||| || |||||||  | | || ||||||| |||||  ||||||||  ||| |||||| || ||||| ||||  |||| | ||||    
T  36812770 gagaattgctgtttacactttacataaggatgtgccacacgagtattttactcttttgccccctcggcagttagctaccgaggaatttgaaaatccggct 36812869  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||  |||||||||||||||| || |||||||    
T  36812870 gcagttaactaccgaggaaaacctcggtagtaaactgcc 36812908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 42760253 - 42760211
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  42760253 ggctgtagttaactgccgaggaaaacctcggtagttaactgcc 42760211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 44227141 - 44227183
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  44227141 ggctggagttaactgccgaggaaaacctcggtagttaactgcc 44227183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 46697744 - 46697782
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  46697744 gcagttaactgccgaggaaaacctcggtagttaactgcc 46697782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 49140891 - 49140849
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| ||||||||||||| || ||||||||||    
T  49140891 ggctgcagttaactgccgaggaaaacctcagtagttaactgcc 49140849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 49194954 - 49195024
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| ||| |||| |||| | ||||||||||||||||  |||||||  ||||| ||||||||||    
T  49194954 cagttaactgctgaggaattaaaaagccggctgcagttaactgttaaggaaaatttcggtagttaactgcc 49195024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 50477213 - 50477251
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  50477213 gcagttaactgccgaggaaaacctcggtagttaactgcc 50477251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 3112868 - 3112799
Alignment:
Q  70 agttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||| || || ||||| ||||||| |||| | |||||||||||||| |  ||||||||||    
T  3112868 agttaactgccgaggaagtccaaaaccggctgcaattaattatcgaggaaaacctcagcagttaactgcc 3112799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 13743294 - 13743347
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaac 122  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| ||||||||||    
T  13743294 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 13743347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 34645593 - 34645638
Alignment:
Q  99 ctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    |||||||||||| ||||||||||||||||  |||||||||| ||||    
T  34645593 ctgcagttaactctcgaggaaaacctcggcagttaactgccgaaaa 34645638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 41137719 - 41137772
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaac 122  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| ||||||||||    
T  41137719 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 41137772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 44523493 - 44523456
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  44523493 gcagttaactgccgaggaaaacctcagttgttaactgc 44523456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 49196550 - 49196453
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||||  |||||||||||||  |||| || |||||| |||| |||| |||| | || |||||||||||  ||||||||||| || | ||||||||    
T  49196550 acgagtaaaatacgtttttgccccctcgatagctaactgtcgaggaattaaaaatccggttgcagttaactaccgaggaaaaccgcgatagttaactg 49196453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 50998689 - 50998656
Alignment:
Q  106 taactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||||||||| ||||||||||    
T  50998689 taactgtcgaggaaaacctcggtagttaactgcc 50998656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 51696654 - 51696573
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgag 83  Q
    |||||||||||||| ||||||  ||||||  | | || ||||||||||||| |||||||||  |||  ||||||||||||||    
T  51696654 gagaattgttgttgccacatttgataaggctgtggcacacgagtaatttacttttttgccccctcggtagttaactgccgag 51696573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 4004885 - 4004917
Alignment:
Q  107 aactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||||||||| ||||||||||    
T  4004885 aactgtcgaggaaaacctcggtagttaactgcc 4004917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 8161006 - 8160942
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactatttt 194  Q
    |||||||||| | | | |||||||||  ||||||||| | |||||||||||||||| ||||||||    
T  8161006 gttaactgccgagagaaatgtttcatacgatgaaacagctacctgctccccctacacactatttt 8160942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 11270361 - 11270286
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaa-aactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||||| || || ||| ||| ||||||||||||||| | |||||||| ||||  ||||||||||    
T  11270361 ttcgacagttaactgccga-aatttaaaagaaccggctgcagttaactgccaaggaaaacttcggcagttaactgcc 11270286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 36134354 - 36134394
Alignment:
Q  99 ctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||| |||||||||||||||  ||||||||||    
T  36134354 ctgcagttaactgccgaggaaaacctcgggagttaactgcc 36134394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 42804398 - 42804498
Alignment:
Q  11 tgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaact 110  Q
    |||||||||||| |||||||  ||| || || |||||  |||  ||| ||||  |||| |||||||||||||| |||| ||||||| | |||||||||||    
T  42804398 tgttgacacatttcataaggctgaggcacacaagtaaaatacactttagccccctcgatagttaactgccgaggaattaaaaaactagttgcagttaact 42804497  T
Q  111 g 111  Q
    |    
T  42804498 g 42804498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 46347791 - 46347736
Alignment:
Q  70 agttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcg 126  Q
    ||||||||| ||| |||||||| ||  ||||||||||||||| ||||||||||||||    
T  46347791 agttaactgtcga-aaattcaataatcggctgcagttaactgccgaggaaaacctcg 46347736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 49268915 - 49268847
Alignment:
Q  71 gttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||  ||| |||| |||| | || |||||||||||| |||||||||| ||||| ||||||||||    
T  49268915 gttaactgtggaggaattaaaaatccggttgcagttaactgccgaggaaaacatcggtagttaactgcc 49268847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 4980056 - 4979824
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| | |  ||| |||||||||| |||  | ||||||||| |||||    
T  4980056 gagaattgttgttgacacattgcataaggttgaggcacacgagtaatttacgtttttcctccctcggcagttaactgtcgacgatttcaaaaaccggctg 4979957  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatc 201  Q
    ||||||||||  |||||||   ||||| |||||||||| |  |||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  4979956 cagttaactgctgaggaaattatcggtagttaactgccgaggaatatgcttcatcagatgaaacagtcacctgctccccctacatactattttcatcatc 4979857  T
Q  202 aacttcaataccacctccattcaatccccaaat 234  Q
    |||||||| | ||||||||||||||||||||||    
T  4979856 aacttcaacatcacctccattcaatccccaaat 4979824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 11494477 - 11494709
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||| ||||||||  | ||||  |||| | ||||||||  |||||||||| ||  ||| || ||||||| |||| ||||||||| | ||||    
T  11494477 agagaattgttgtcgacacatttgaaaagggtgagaaacacgagtaaaatacgtttttgtcccctcggcaattaactgtcgaggaattcaaaacc-ggct 11494575  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||||||||||| |||||||||||||||| |||||||||| |||| |||||||||| |||||||||| ||||||||| ||| |||| ||||||||||||||    
T  11494576 gcagttaactgccgaggaaaacctcggtagttaactgccgaaaattatgtttcatgagatgaaacagccacctgcttcccttacacactattttcatcat 11494675  T
Q  201 caacttcaataccacctccattcaatccccaaat 234  Q
    ||||||| ||||||| ||||| ||||||||||||    
T  11494676 caacttccataccacttccatccaatccccaaat 11494709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 21470840 - 21471069
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||| || |||||||| ||||||| ||| || || |||||  |||||||||| |   ||| |||||||||| ||||  |||||||||||| ||||||    
T  21470840 aattgttctttacacattggataaggttgaggcacacaagtaaaatacgtttttgtcttctcggcagttaactgtcgaggtattcaaaaactgactgcag 21470939  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||| |  ||||||||||||||| |||||||||| | |||||||||||||| |||||||||  |||||||||||| |||| |||||||||||| |||||    
T  21470940 ttaaccgcagaggaaaacctcggtagttaactgccgagaaatatgtttcatcggatgaaacagtcacctgctccccatacacactattttcatcgtcaac 21471039  T
Q  205 ttcaataccacctccattcaatccccaaat 234  Q
    ||| ||||||| ||||| |||| |||||||    
T  21471040 ttccataccacttccatccaattcccaaat 21471069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 4975821 - 4975935
Alignment:
Q  124 tcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattc 223  Q
    ||||| |||||||||| |  |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4975821 tcggtggttaactgccgaggaatatgtttcatcagatgaaacagtcacctgctccccctacatactatttttatcatcaacttcaataccacctccattc 4975920  T
Q  224 aatccccaaattcaa 238  Q
    |||||||||||||||    
T  4975921 aatccccaaattcaa 4975935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 38464904 - 38464676
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||||||||| |||||||| |||  | | ||||||  || | ||||||    ||||||||||| || |||| ||||| ||| | |||||    
T  38464904 gagaattgttgttgacacatttcataaggttgaggtacatgagtaaaatatgattttgcttcctcgacagttaaatgacgaggaattcgaaacc-ggctg 38464806  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatc 201  Q
    |||||||||||| |||||||||||||| |||||||| | | || |||||||||||||||||||||  |||   ||||||||||| |||||||||||||||    
T  38464805 cagttaactgtcaaggaaaacctcggtagttaactgacgataattatgtttcatcagatgaaacagtcac---ctccccctacacactattttcatcatc 38464709  T
Q  202 aacttcaataccacctccattcaatccccaaat 234  Q
    |||||| ||||||| ||||| ||||||||||||    
T  38464708 aacttccataccacttccatccaatccccaaat 38464676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 44049174 - 44049268
Alignment:
Q  144 aatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaa 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  44049174 aatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccttctacattcaatccccaaattcaa 44049268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 69 - 208
Target Start/End: Original strand, 9889995 - 9890133
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||||||||||| |||||||||| |  | ||||||||||||||||||||| |    
T  9889995 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga-tatgtttcatcagatgaaacagc 9890093  T
Q  169 cacctgctccccctacatactattttcatcatcaacttca 208  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  9890094 cacctgctccccctacacactattttcttcatcaacttca 9890133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 69 - 208
Target Start/End: Complemental strand, 15999871 - 15999733
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||||||||  ||| | ||||||| ||||||| |||||||||||||||| |||||||||| |  || |||||||||||||||||||| |    
T  15999871 cagttaactgccgagaaatttgaaatccggctgcaattaactgccgaggaaaacctcggtagttaactgccgaggaa-atgtttcatcagatgaaacagc 15999773  T
Q  169 cacctgctccccctacatactattttcatcatcaacttca 208  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  15999772 cacctgctccccctacacactattttcttcatcaacttca 15999733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 44051232 - 44051094
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||  ||| || || ||||||||||||||||||||  ||| | ||||||||||||| || | | |||| ||||    
T  44051232 agagaattgttgttgacacattgcataaggctgaggcacaccagtaatttacgtttttgccccatcggcggttaactgccgaggaaataagaaaccggct 44051133  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||  |||||||| ||||||| ||||||||||    
T  44051132 gcagttaactcccgaggaaatcctcggtagttaactgcc 44051094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 4768714 - 4768818
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| | ||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||    
T  4768714 gttaactgccgagaaatatgtttcatcatatgaaacagtcacctgctccccctacatactattttcatcatcaatttccataccacttccatccaatccc 4768813  T
Q  230 caaat 234  Q
     ||||    
T  4768814 taaat 4768818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 18581343 - 18581240
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| | || |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||| ||| |||    
T  18581343 gttaactgccgagaattatgtttcatcagatgaaacaaccacctgctccccctacacacta-tttcatcatcaacttccataccacttccatccaaaccc 18581245  T
Q  230 caaat 234  Q
    |||||    
T  18581244 caaat 18581240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 49573040 - 49572904
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||| ||||||||||||||||||||||  ||| || || |||||  |||||||||||||  |||||||||||||| |||| ||||||| ||  ||||    
T  49573040 agagaatcgttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgccccatcgacagttaactgtcgaggaattcaataatcggct 49572941  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||||||| |||||||||||||||| || |||||    
T  49572940 gcagttaactgccgaggaaaacctcggtagtaaactg 49572904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 6280791 - 6280940
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||||||||||| | | || |||||||||||||||||||||||  ||| |||||||||| | |  |||| |||||| |||||    
T  6280791 gagaattgttgttgacacattgcataaggttggggcacacgagtaatttacgtttttgccctctcggcagttaactgtcaaagaatttaaaaaccggctg 6280890  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtt 151  Q
    ||||||| |   ||||||||| ||||| |||||||| |  ||||||||||    
T  6280891 cagttaaatactgaggaaaacatcggtagttaactgtcggaaaatatgtt 6280940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 3450078 - 3449987
Alignment:
Q  143 aaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    ||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  3450078 aaatatgtttcatcagatgaaacagtcccctgctccccctacacactattttcatcatcaactttcataccacttccatccaatccccaaat 3449987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 19073699 - 19073589
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttca 196  Q
    ||||||||||||||| |||||||| ||||||| |||||||||| |    | ||||||||||||||||||| |||||||||||||||||| |||||||||     
T  19073699 ggctgcagttaactgccgaggaaatcctcggtagttaactgccgatgg-tctgtttcatcagatgaaacagccacctgctccccctacacactattttct 19073601  T
Q  197 tcatcaacttca 208  Q
    ||||||||||||    
T  19073600 tcatcaacttca 19073589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 21472620 - 21472504
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  |||| | ||||||||  ||||||||||||   ||| ||||||||||||||| ||||||||||  ||||||||    
T  21472620 aattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccgcctcggcagttaactgccgaggaattcaaaaatcggctgcag 21472521  T
Q  105 ttaactgtcgaggaaaa 121  Q
    ||||||| |||||||||    
T  21472520 ttaactgccgaggaaaa 21472504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 955729 - 955868
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||| |||||||||||| ||||| || ||| || || |||||  ||||||||||||  || | ||||||||||| ||| ||||||||||  ||||||||    
T  955729 aattgatgttgacacatttcataaagttgaggcacacaagtaaaatacgtttttgcctctttggcagttaactgctgaggaattcaaaaatcggctgcag 955828  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    ||||||| |||| ||||||||||| |||||||||| ||||    
T  955829 ttaactgccgagaaaaacctcggtagttaactgccgaaaa 955868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 29700438 - 29700304
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  ||| || || |||||  |||| ||||| |   ||||||||||||||| ||| ||||||| ||| ||||||||    
T  29700438 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgtctcctcgacagttaactgctgaggaattcaataaccggctgcag 29700339  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| |||||||||||||||| ||||| ||||    
T  29700338 ttaactgccgaggaaaacctcggtagttaattgcc 29700304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 37959856 - 37959717
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  ||| || ||||||||  ||||||||| |||  ||| ||||||||||  ||| |||| || |||  |||||||    
T  37959856 aattgttgttgacacattacataaggctgaggcacacgagtaaaatacgtttttaccccctcggcagttaactgttgaggaatttaataaccagctgcag 37959757  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    ||||||| |||||||||| ||||| |||||||||| ||||    
T  37959756 ttaactgccgaggaaaacatcggtagttaactgccgaaaa 37959717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 51426474 - 51426613
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||||||||| || |||||||   || || || |||||  |||||||||| || ||||||||||||||| |||| ||||||||||  ||||||||    
T  51426474 aattgttgttgacacgtttcataaggcttaggcacacaagtaaaatacgtttttgtcctttcgacagttaactgtcgaggaattcaaaaatcggctgcag 51426573  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    |||| || |||| |||||||| || |||||||||| ||||    
T  51426574 ttaattgccgagaaaaacctcagtagttaactgccgaaaa 51426613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 44561466 - 44561332
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  |||| | ||||||||  |||| ||||||||  |||   ||||||||||||| || | |||||| ||||||||    
T  44561466 aattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgattttgccctctcggttgttaactgccgagtaaataaaaaaccggctgcag 44561367  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||  ||||||||| |||||| ||||||||||    
T  44561366 ttaactaccgaggaaaatctcggtagttaactgcc 44561332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 24417487 - 24417327
Alignment:
Q  70 agttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaacc 169  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| |||    | | ||  | |||||| | | ||| |||||||||||||||||||| ||    
T  24417487 agttaactgtcgagaaattcaaaaaccggctgcagttaactgtccaggttttctt-ggcagctaactgtcgagaaaaatgtttcatcagatgaaacagcc 24417389  T
Q  170 acctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    || |||||||| |||| |||  |||||||||||||||| ||||||| |||||  |||||||||||    
T  24417388 acttgctcccc-tacacact--tttcatcatcaacttccataccacttccatctaatccccaaat 24417327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 17139660 - 17139763
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| | ||| ||||||||||||||||||||  || |||||| ||||| | ||||||| ||||||||||||| ||||||| ||||| |||||||    
T  17139660 gttaactgccgagaaaaatgtttcatcagatgaaacagtcatctgctctccctaaacactattt-catcatcaacttctataccacttccatccaatccc 17139758  T
Q  230 caaat 234  Q
    |||||    
T  17139759 caaat 17139763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 13173310 - 13173373
Alignment:
Q  145 atatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  13173310 atatgtttcatctgatgaaacagccacctgctccccctacattctattttcttcatcaacttca 13173373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 958729 - 958596
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||| ||||||||||||  ||||||  ||| || |  |||||  |||||||||| ||  ||||||||||||||| ||  ||||||||||| || |||||    
T  958729 aattgatgttgacacattttataaggctgaggcacataagtaaaatacgtttttgtcctctcgacagttaactgc-gatgaattcaaaaaccggttgcag 958631  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| |||||||||||||||| ||||||||||    
T  958630 ttaactgccgaggaaaacctcggtagttaactgcc 958596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 1087912 - 1087973
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||||||    
T  1087912 atgtttcatcagatgaaacagctacctgctccccctacacactattttcttcatcaacttca 1087973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 50278938 - 50278817
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||  ||||||  ||||||| | | || |||||||||||||||||||| ||  |||||||||||||| |||  ||||  ||| | ||||    
T  50278938 agagaattgttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgtcccctcgacagttaactgtcgatgaattagaaatccggct 50278839  T
Q  101 gcagttaactgtcgaggaaaac 122  Q
    ||||||||||| ||||||||||    
T  50278838 gcagttaactgccgaggaaaac 50278817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 51644510 - 51644426
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccac 215  Q
    |||||||||| | || |||||||||||| |||||||| ||| |||||||||||||| |||| |||||||||||||||| |||||||    
T  51644510 gttaactgccgataattatgtttcatcaaatgaaacagccatctgctccccctacacacta-tttcatcatcaacttccataccac 51644426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 208
Target Start/End: Original strand, 41023387 - 41023523
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||||||||  ||| | |||||||||||||||  ||||||| ||||||| |||||||||| |    | |||||||| ||||  || | |    
T  41023387 cagttaactgccgagaaatttgaaatccggctgcagttaactgctgaggaaatcctcggtagttaactgccgaggggt-tgtttcatgagat--aaaagc 41023483  T
Q  169 cacctgctccccctacatactattttcatcatcaacttca 208  Q
    ||||||||||||||||| | ||||||| ||||||||||||    
T  41023484 cacctgctccccctacacattattttcttcatcaacttca 41023523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 50274732 - 50274812
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaa 120  Q
    |||||||||||||||||||||||  ||| ||||||||||||||| ||||  ||| | ||||||||||||||| ||||||||    
T  50274732 acgagtaatttacgtttttgccccctcggcagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaa 50274812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 1041907 - 1042006
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||| |||||||||  ||| ||||||||||||||| ||||  ||| | | ||||||||||||| |||| |||| |||||| ||||||||||    
T  1041907 acgagtaatttacttttttgcccgatcggcagttaactgccgaggaattagaaatccgactgcagttaactgccgagaaaaatctcggtagttaactgcc 1042006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 56138180 - 56138323
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaa-----aaac 95  Q
    ||||||||| ||||  ||||||  ||||||| | | || || |||||  |||| |||||||| ||||||||||||||||||||||||| ||     || |    
T  56138180 agagaattgctgttcccacatttgataaggttgtgccacactagtaaaatacgattttgccccttcgacagttaactgccgagaaattaaattaaaaatc 56138279  T
Q  96 tggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
     ||||||||||||||| ||||||||||||| || ||||||||||    
T  56138280 cggctgcagttaactgccgaggaaaacctcagtagttaactgcc 56138323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 34151616 - 34151690
Alignment:
Q  70 agttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    |||||| ||||||| ||||||||||  ||||||||||||||| |||||||||||||||| || ||||||| ||||    
T  34151616 agttaaatgccgagtaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagtaaactgccgaaaa 34151690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 34154538 - 34154432
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  |||| | ||| ||||  ||| |||||| ||  ||| ||||||||||||||| |||| |||||| ||||||||    
T  34154538 aattgttgttgacacatttcataaggctgagaaacacgggtaaaatacatttttgtcccatcggcagttaactgccgaggaattaaaaaaccggctgcag 34154439  T
Q  105 ttaactg 111  Q
    |||||||    
T  34154438 ttaactg 34154432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44049085 - 44049164
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaa 86  Q
    ||||||||||||||||||||||||||||||      || ||||||||||||||||||| |||  ||| ||||||||||||||||||    
T  44049085 agagaattgttgttgacacattgcataagg------cacacgagtaatttacgtttttaccccctcggcagttaactgccgagaaa 44049164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 56304811 - 56304926
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||||||  ||||||| |||| | ||||||||  ||| ||||||||||| || |||||||||| |||| |||| |||| |||||||    
T  56304811 gagaattgttgttcccacatttgataaggttgagaaacacgagtaaaatacatttttgcccat-cggcagttaactgtcgaggaattaaaaatctggctg 56304909  T
Q  102 cagttaactgtcgagga 118  Q
    ||||||| || ||||||    
T  56304910 cagttaattgccgagga 56304926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 4768615 - 4768726
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  ||  || || |||||  ||   ||||||||  ||| ||||||||||||||| ||||||||| ||||||||||    
T  4768615 aattgttgttgacacatttcataaggctgatgcacacaagtaaaatataattttgccccctcggcagttaactgccgaggaattcaaaatctggctgcag 4768714  T
Q  105 ttaactgtcgag 116  Q
    ||||||| ||||    
T  4768715 ttaactgccgag 4768726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 15995723 - 15995793
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| ||||||| ||||  ||| | ||||||||||||||| |||||||||||||||| ||||||||||    
T  15995723 cagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgcc 15995793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 19069188 - 19069258
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| ||||||| ||||  ||| | ||||||||||||||| |||||||||||||||| ||||||||||    
T  19069188 cagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgcc 19069258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 38460450 - 38460497
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||    
T  38460450 aaactagctgcagttaactgtcgaggaaaacctcggtaattaactgcc 38460497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 55407858 - 55407795
Alignment:
Q  76 ctgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||| |||| |||| | ||||||||||||||| ||||||||| |||||| ||||||||||    
T  55407858 ctgccgaggaattaaaaatccggctgcagttaactgccgaggaaaatctcggtagttaactgcc 55407795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 3403908 - 3403966
Alignment:
Q  176 tccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||| ||||||||| |||||| ||||| | |||||||||||||||||| ||||    
T  3403908 tccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaat 3403966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 6178154 - 6178112
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  6178154 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 6178112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 17342143 - 17342213
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||| |||  ||||||||||||||  |||| ||||| ||||| ||||||||||    
T  17342143 cagttaactgccgaggaattcataaatcggctgcagttaactaccgagaaaaacttcggtagttaactgcc 17342213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 21022932 - 21022890
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  21022932 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 21022890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 24414832 - 24414902
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaac 135  Q
    |||||| |||||||||||| ||||||||||  || ||||||||||||  ||| ||||||||||| ||||||    
T  24414832 tcgacaattaactgccgaggaattcaaaaatcggttgcagttaactgctgagtaaaacctcggtagttaac 24414902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 34503710 - 34503780
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||| ||||  |||||||||||||  |||| ||||| ||||| ||||||||||    
T  34503710 cagttaactgccgaggaattcataaaccagctgcagttaactaccgagaaaaacttcggtagttaactgcc 34503780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 49094113 - 49094155
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  49094113 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 49094155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 67626 - 67663
Alignment:
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  67626 cagttaactgtcgaggaaaacctcggtagttaactgcc 67663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 16984300 - 16984163
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||| |||||||  ||||||  | | || |||||||| | |||||||| |||  ||| ||||||||||||||    ||  ||| | |||||    
T  16984300 gagaattgctgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggcagttaactgccgaagttttagaaatccggctg 16984201  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||||||||||||| | ||||||||||    
T  16984200 cagttaactgccgaggaaaacctcgatagttaactgcc 16984163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 20208539 - 20208580
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  20208539 ggctgcagttaactgccgaggaaaacctcggtagttaactgc 20208580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 28320493 - 28320542
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaattta 51  Q
    |||||||||||||||||||||||||||||| | | || ||||||||||||    
T  28320493 gagaattgttgttgacacattgcataaggttgtgtcacacgagtaattta 28320542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 39590611 - 39590570
Alignment:
Q  98 gctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  39590611 gctgcagttaactgccgaggaaaacctcggtagttaactgcc 39590570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 9472859 - 9472927
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||||||| ||| |||||| |||||||||||||||||||  |||||||| | |||||  |||||||    
T  9472859 cagttaactgctgaggaattcataaactggctgcagttaactaccgaggaaatcttcggtaattaactg 9472927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 39588026 - 39588142
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  || |||||||||||  | | || |||||||| | ||||||||||||  ||| ||||||||||||||| ||||  |||   | |||    
T  39588026 gagaattgttgttctcatattgcataaggatgtgtcacacgagtaaatgacgtttttgccccctcggcagttaactgccgaggaattagaaattcgactg 39588125  T
Q  102 cagttaactgtcgagga 118  Q
    |||||||||| ||||||    
T  39588126 cagttaactgccgagga 39588142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 49422080 - 49422187
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||| ||||||| |||||||  ||| || || | |||  ||||||||||||| ||||      |||||||||| |||| |||||| ||||||||    
T  49422080 aattgttgtttacacatttcataaggctgagtcacacaaataaaatacgtttttgccccttcgg-----aactgccgaggaattaaaaaaccggctgcag 49422174  T
Q  105 ttaactgtcgagg 117  Q
    |||||||||||||    
T  49422175 ttaactgtcgagg 49422187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 55793915 - 55793991
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaa-ctggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||||||| |  || ||||| | ||||||||||||||| |||||||||||||||  ||||||||||    
T  55793915 ttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgcc 55793991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 72510 - 72545
Alignment:
Q  103 agttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    |||||||||||||||||||||||||| |||||||||    
T  72510 agttaactgtcgaggaaaacctcggtagttaactgc 72545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 19993042 - 19993085
Alignment:
Q  68 acagttaactgccgagaaattcaaaaactggctgcagttaactg 111  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||    
T  19993042 acagttaactgccgagaaattcataaaccggctacagttaactg 19993085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 30042513 - 30042567
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctaca 185  Q
    |||||||||| || || |||||||||||||||||||| ||||||||||| ||||||    
T  30042513 gttaactgccgaagaa-atgtttcatcagatgaaacagccacctgctcctcctaca 30042567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 30726790 - 30726743
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  30726790 aaaccggcagcagttaactgccgaggaaaacctcggtagttaactgcc 30726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 37563329 - 37563282
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  37563329 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 37563282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 39773428 - 39773475
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  39773428 aaaccggcagcagttaactgccgaggaaaacctcggtagttaactgcc 39773475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 40358329 - 40358282
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  40358329 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 40358282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 49566469 - 49566422
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactatttt 194  Q
    |||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  49566469 atgtttcatccgatgaaacagctacctgctccccctacacactatttt 49566422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 54634064 - 54634017
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  54634064 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 54634017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 18884576 - 18884506
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||| |  || |||||| ||||||||||||||| |||| ||||| ||||  ||||||||||    
T  18884576 cagttaactgccgaaattttgaaaaaccggctgcagttaactgccgagaaaaacttcggcagttaactgcc 18884506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 31425358 - 31425320
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  31425358 gcagttaactgccgaggaaaacctcggtagttaactgcc 31425320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 33383750 - 33383876
Alignment:
Q  13 ttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgt 112  Q
    |||||||||| ||||||||  || || || |||||  ||| ||||||||   |||  |||||| || |||| | || |||||| | |||||||||||||     
T  33383750 ttgacacatttcataaggtttaggcacacaagtaaaatacatttttgccttctcggtagttaattgtcgaggattttaaaaaccgactgcagttaactgc 33383849  T
Q  113 cgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||  ||||||||||    
T  33383850 cgaggaaaacctcggaagttaactgcc 33383876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 41795400 - 41795358
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||| | ||||||||||    
T  41795400 ggctgcagttaactgccgaggaaaacctcgttagttaactgcc 41795358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 46097087 - 46097041
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaa 47  Q
    |||||||||||||||| |||||||||||||  |||||| ||||||||    
T  46097087 agagaattgttgttgatacattgcataaggctgagacacacgagtaa 46097041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 51492100 - 51492142
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| | |||||||||||||| ||||||||||    
T  51492100 ggctgcagttaactgcctaggaaaacctcggtagttaactgcc 51492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 3403843 - 3403900
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaa 121  Q
    |||| ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||||    
T  3403843 ttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 3403900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 4975752 - 4975821
Alignment:
Q  3 agaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagt 72  Q
    ||||||||| ||||||||||| | ||||  ||| || ||||||||||||||||||| |||  ||||||||    
T  4975752 agaattgttattgacacattgaaaaaggctgaggcacacgagtaatttacgtttttaccccctcgacagt 4975821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 8109324 - 8109461
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||  ||||||  ||||||  |||| | ||||||||  |||| |||| |||  | |  ||||||||| |||| |||| || | | ||||    
T  8109324 agagaattgttgttcccacatttgataaggctgagaaacacgagtaaaatacgattttacccccttggtagttaactgtcgaggaattaaatatccggct 8109423  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
     |||||||||| |||||||||||||||  |||||||||    
T  8109424 acagttaactgccgaggaaaacctcgggagttaactgc 8109461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 26792293 - 26792244
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    |||| ||| ||||||||||| ||||||||| |||||| ||||||||||||    
T  26792293 aaaccggcggcagttaactgccgaggaaaatctcggtagttaactgccaa 26792244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44674098 - 44674178
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccga 82  Q
    ||||||||||||||  |||||| |||||||| | | || |||||||| | |||||||||||| || | ||||||||||||||    
T  44674098 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctt-ggcagttaactgccga 44674178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 4786376 - 4786336
Alignment:
Q  99 ctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||   ||||||||||||||||||||||||||    
T  4786376 ctgcagttaactactgaggaaaacctcggttgttaactgcc 4786336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 6283512 - 6283464
Alignment:
Q  70 agttaactgccgagaaattcaaaaactggctgcagttaactgtcgagga 118  Q
    ||||||||||||   ||||||||||| ||||||||||||||| ||||||    
T  6283512 agttaactgccgcagaattcaaaaaccggctgcagttaactgccgagga 6283464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 9473733 - 9473661
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    ||||||| || |||| |||||| |||  ||||||||||||||  |||||||||  ||||| ||||||||||||    
T  9473733 cagttaattgtcgaggaattcataaatcggctgcagttaactaccgaggaaaatttcggtagttaactgccaa 9473661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 26932619 - 26932655
Alignment:
Q  103 agttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  26932619 agttaactgccgaggaaaacctcggtagttaactgcc 26932655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 43176705 - 43176633
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    ||||||||||||||||||| |  || || |||  |||||||||||||| |||||||||| ||||  |||||||    
T  43176705 ttcgacagttaactgccgaaattttaaagaacctgctgcagttaactgccgaggaaaacttcggcagttaact 43176633  T

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Target: chr5 (Bit Score: 118; Significance: 4e-60; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 42 - 234
Target Start/End: Complemental strand, 4204308 - 4204118
Alignment:
Q  42 gagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    |||||||||||||||||||||  |||||||||||||| |||||||||  ||| |  ||||||||||||||||||||||||||||||| |||||||||| |    
T  4204308 gagtaatttacgtttttgccctctcgacagttaactgtcgagaaatttgaaacc--gctgcagttaactgtcgaggaaaacctcggtagttaactgccga 4204211  T
Q  142 aaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
     |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||| || ||||| || |||||||||    
T  4204210 gaaatatgtttcatcagatgaaacaactacctgctccctctacacactattttcatcatcaacttcaatactacttccatccagtccccaaat 4204118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 234
Target Start/End: Complemental strand, 7801125 - 7800894
Alignment:
Q  3 agaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgc 102  Q
    ||||||| | ||||||||||||||||||   ||||| |||| ||||||||||||||| ||| |||  ||||||||| || | ||||||||||  ||||||    
T  7801125 agaattgcttttgacacattgcataaggataagacacacgaataatttacgtttttgtccactcggtagttaactgtcgtggaattcaaaaatcggctgc 7801026  T
Q  103 agttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatca 202  Q
    |||||| |  |||||||| | ||||| |||||||||  |  |||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||    
T  7801025 agttaattaccgaggaaatcatcggtagttaactgctgaggaatatgtttcatcagatgaaacagtcacctgctcctcctacgtactattttcatcatca 7800926  T
Q  203 acttcaataccacctccattcaatccccaaat 234  Q
    ||||||||||||||||||||||||||||||||    
T  7800925 acttcaataccacctccattcaatccccaaat 7800894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 33993225 - 33993445
Alignment:
Q  13 ttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgt 112  Q
    |||||||||| |||||||| |||| ||||||||||  |||||||||||||  |||  ||||||||||||| |||||||||||| ||||| |||||||||     
T  33993225 ttgacacatttcataaggttgagaaatacgagtaaaatacgtttttgccccctcggaagttaactgccgaaaaattcaaaaaccggctgtagttaactgc 33993324  T
Q  113 cgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaatac 212  Q
    || | ||||||||||| |||||||||| | || ||||||||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||| ||||    
T  33993325 cgtgaaaaacctcggtagttaactgccgagaattatgtttcatcagttgaaacagccacctgctccccctacacacta-tttcatcatcaacttccatac 33993423  T
Q  213 cacctccattcaatccccaaat 234  Q
    ||| || || ||| ||||||||    
T  33993424 cacttcaatccaaaccccaaat 33993445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 18538471 - 18538262
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| ||| |||  ||| || || |||||  |||| ||||||||  ||| ||||||| || |||| ||||||||||| ||||||||    
T  18538471 aattgttgttgacacatttcattaggctgaggcacacaagtaaaatacgattttgccccctcggcagttaattgtcgaggaattcaaaaaccggctgcag 18538372  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||||| |||||||||| ||||| |||||||||| | || |||||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||    
T  18538371 ttaactgccgaggaaaacttcggtagttaactgccgagaattatgtttcattagatgaaacagccacctgctccccctacacacta-tttcatcatcaac 18538273  T
Q  205 ttcaataccac 215  Q
    ||| |||||||    
T  18538272 ttccataccac 18538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 72 - 215
Target Start/End: Complemental strand, 30354465 - 30354323
Alignment:
Q  72 ttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccac 171  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||   | ||||||||||||||| ||||||||  |||    
T  30354465 ttaactgtcgagaaattcaaaaactggttgcagttaactgtcgaggaaaacctcggtagttaactgttgagaaatatgtttcatcaaatgaaacagtcac 30354366  T
Q  172 ctgctccccctacatactattttcatcatcaacttcaataccac 215  Q
    |||||| |||||||||||| |||||||||||||||| |||||||    
T  30354365 ctgctcaccctacatacta-tttcatcatcaacttccataccac 30354323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 65 - 234
Target Start/End: Original strand, 28387266 - 28387434
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaa 164  Q
    ||||||||||||||||||| ||||  ||  | |||||||||||| || |||||||| ||||||| |||||||||| |  || ||||||||||||||||||    
T  28387266 tcgacagttaactgccgaggaatttgaattccggctgcagttaattgccgaggaaatcctcggtagttaactgccgatgaa-atgtttcatcagatgaaa 28387364  T
Q  165 caaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    || |||||||||||||||||| |||||||||||||||||||||| | | ||| |||||||||||| ||||    
T  28387365 cagccacctgctccccctacacactattttcatcatcaacttcatttctaccaccattcaatcccaaaat 28387434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 234
Target Start/End: Complemental strand, 34124073 - 34123830
Alignment:
Q  3 agaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgc 102  Q
    ||||||||||||  ||||||  ||||||| | | || || |||||  |||| ||||||||  ||| |||||||||| |||||||||  ||| | ||||||    
T  34124073 agaattgttgttcccacatttaataaggttgtgccacaccagtaaaatacgattttgccccctcggcagttaactgtcgagaaatttgaaatccggctgc 34123974  T
Q  103 agttaactgtcgaggaaaacctcggttgttaactgccaa------------aaaatatgtttcatcagatgaaacaaccacctgctccccctacatacta 190  Q
    ||||||||| | |||||||||||||| |||||||||| |            | |  ||||||||||||||||||||  ||||||||||||||||||||||    
T  34123973 agttaactgccaaggaaaacctcggtagttaactgccgaggttaactaccgagagaatgtttcatcagatgaaacagtcacctgctccccctacatacta 34123874  T
Q  191 ttttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||| | |||||||||||||||||| ||||    
T  34123873 ttttcatcatcaacttcatttccacctccattcaatcccaaaat 34123830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 1035213 - 1035358
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttca 196  Q
    |||||||||||| |  |||||||| ||||| | |||||||||| |  || |||||||||||||||||||| |||||||||||||||||| |||||||||     
T  1035213 ggctgcagttaattaccgaggaaatcctcgatagttaactgccgaggaa-atgtttcatcagatgaaacagccacctgctccccctacacactattttct 1035311  T
Q  197 tcatcaacttcaataccacctccattcaatccccaaattcaagtttt 243  Q
    |||||||||||| | |||||||||||||||||| |||| ||| ||||    
T  1035312 tcatcaacttcatttccacctccattcaatcccaaaatccaattttt 1035358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 3603287 - 3603145
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||||||||||  ||| || |  |||||  ||||||||||| |  ||||||||||||||||||  ||||||| |||||||||    
T  3603287 gagaattgttgttgacacattgcataaggctgaggcacataagtaaaatacgtttttgctccctcgacagttaactgccgaagaattcaataactggctg 3603188  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    |||||||||  |||||||||||||||| |||||||||| ||||    
T  3603187 cagttaacttccgaggaaaacctcggtagttaactgccgaaaa 3603145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 55 - 243
Target Start/End: Complemental strand, 25897165 - 25896978
Alignment:
Q  55 ttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttca 154  Q
    |||| ||| |||| ||||||||| ||||| ||||  ||  | ||||||||||||||| | |||||| ||||||| |||||||||| |  || ||||||||    
T  25897165 ttttaccccttcggcagttaactaccgaggaatttgaactccggctgcagttaactgcccaggaaatcctcggtagttaactgccgaggaa-atgtttca 25897067  T
Q  155 tcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaagtttt 243  Q
    || ||||||||| ||||||||||||||||||  |||||||| |||||| ||||| | |||||||||||||||||| |||| ||| ||||    
T  25897066 tccgatgaaacagccacctgctccccctacacgctattttcttcatcaccttcatttccacctccattcaatcccaaaatccaattttt 25896978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 31098930 - 31098838
Alignment:
Q  146 tatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaa 238  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  31098930 tatgtttcatcagatgaaacagccatctgctccccctacatactattttcatcatcaacttcatttccacctctattcaatcccccaattcaa 31098838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 18307189 - 18307325
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||||||||||| |||||| || ||| ||||||||||  ||||||||||| | |||| |||||||||| |||| |||| |||||  |||||    
T  18307189 gagaattgatgttgacacatttcataagatg-agaaatacgagtaaaatacgtttttgctccttcggcagttaactgtcgaggaattaaaaaatcggctg 18307287  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
     ||||||||| |||||||||||||||| ||||||||||    
T  18307288 tagttaactgccgaggaaaacctcggtagttaactgcc 18307325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 27867840 - 27867753
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||| | |||||||||||||||||| ||||    
T  27867840 atgtttcatccgatgaaacaaccacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaat 27867753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 1398541 - 1398673
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||| |||||| |  |||||  |||  |||||| | |||||||||||||||||||| ||||||| ||| || |||||    
T  1398541 aattgttgttgacacattacataaggttgagacacagaagtaaaatacacttttgctccttcgacagttaactgccgaggaattcaataaccggttgcag 1398640  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||| | | |||||||||||||| ||||||||    
T  1398641 ttaacagccaaggaaaacctcggtagttaactg 1398673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 20200288 - 20200150
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||  ||| || || | |||  |||||||||||||  ||| |||||||||| | |||||||||| |||   ||    
T  20200288 agagaattgttgttgacacattgcataaggctgaggcacacaaataaaatacgtttttgccccatcggcagttaactgtcaagaaattcaataaccaact 20200189  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||| || || ||||||||||    
T  20200188 gcagttaactgccgaggaaaacatctgtagttaactgcc 20200150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 25877556 - 25877692
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||||||||||| | | || ||||||||  ||||||||| ||  |||| || |||| ||||||| |||||  |||| |||||    
T  25877556 gagaattgttgttgacacattgcataaggttgtgtcacacgagtaaaatacgtttttaccacttcggcaattaaatgccgaggaattc-gaaaccggctg 25877654  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    || ||||||| |||||||||| ||||| ||||||||||    
T  25877655 caattaactgccgaggaaaacttcggtagttaactgcc 25877692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 7021895 - 7021791
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  || |||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||| ||||| |  |||||||||||||||||    
T  7021895 gttaactgccgaggaaaatgtttcatccgatgaaacagccacctgctccccctacacactattttcttcatcaccttcattttcacctccattcaatccc 7021796  T
Q  230 caaat 234  Q
     ||||    
T  7021795 aaaat 7021791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 34077821 - 34077936
Alignment:
Q  122 cctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccat 221  Q
    ||||||| ||||| |||| |  || |||||||||| |||||||||  ||||||||||||||||| ||||||||| |||||| ||||| | ||| ||||||    
T  34077821 cctcggtagttaattgccgaggaaaatgtttcatccgatgaaacagtcacctgctccccctacacactattttcttcatcaccttcatttccatctccat 34077920  T
Q  222 tcaatccccaaattca 237  Q
    |||||||| |||||||    
T  34077921 tcaatcccaaaattca 34077936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7796594 - 7796696
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||| |||||||||||||||| |||  ||| || |||||||||||||||||||||||  | | |||||| |||||||| ||||||||||| ||||    
T  7796594 agagaattgatgttgacacattgcattaggctgaggcacacgagtaatttacgtttttgcccccttggcagttatctgccgagtaattcaaaaaccggct 7796693  T
Q  101 gca 103  Q
    |||    
T  7796694 gca 7796696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 20192287 - 20192424
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||||||||| |||||||  ||| || || |||||  |||| |||||||| |||| ||||||||||| ||  ||||||| ||  |||||    
T  20192287 gagaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccttcgtcagttaactgctgaagaattcaataatcggctg 20192386  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||||||||| ||| | ||||| ||||    
T  20192387 cagttaactgccgaggaaaacttcgatagttaaatgcc 20192424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 13568112 - 13568008
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  || |||||||||| ||||||||| | ||||||||| |||||| ||||||||| |||||| ||||| | ||||||||||||||||||    
T  13568112 gttaactgccgaggaaaatgtttcatctgatgaaacagctacctgctccacctacacactattttcttcatcaccttcatttccacctccattcaatccc 13568013  T
Q  230 caaat 234  Q
     ||||    
T  13568012 aaaat 13568008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 34682194 - 34682325
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  |||    || |||||  |||| |||||| |  | |||||||||||| |||| ||||||||||| ||||||||    
T  34682194 aattgttgttgacacatttcataaggctgaggttcacaagtaaaatacgcttttgctcccttgacagttaactgtcgaggaattcaaaaaccggctgcag 34682293  T
Q  105 ttaactgtcgaggaaaacctcggttgttaact 136  Q
    ||||||| |||||||||||||||  |||||||    
T  34682294 ttaactgccgaggaaaacctcgggagttaact 34682325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 38860199 - 38860136
Alignment:
Q  145 atatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||    
T  38860199 atatgtttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttca 38860136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 41201662 - 41201797
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||  || |||||||| |||||||  ||| || ||||||||  |||| ||||| ||  |||||| |||| || |||| ||||||| ||| |||||    
T  41201662 gagaattgccgtcgacacattacataaggctgaggcacacgagtaaaatacgattttgtcctctcgacaattaattgtcgaggaattcaataaccggctg 41201761  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    |||||||||| |||||||||||||||| ||||||||    
T  41201762 cagttaactgccgaggaaaacctcggtagttaactg 41201797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 33995224 - 33995150
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||||||||||||||||  || |||| ||||||| |||||||||||||||  ||||||||||    
T  33995224 tcgacagttaactgccgagaaattcaaaaatcggatgcaattaactgccgaggaaaacctcgggagttaactgcc 33995150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 28388658 - 28388521
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||| |||| || |||||||  | | || ||||||| |||||  ||||||||  ||| |||||| |||||||| ||||  ||| |  ||||    
T  28388658 gagaattgttgtttacactttacataaggctgtgccacacgagtattttactcttttgccccctcggcagttagctgccgaggaatttgaaatccagctg 28388559  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  28388558 cagttaactgccgaggaaaacctcggtagttaactgcc 28388521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 34122506 - 34122595
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||| |||| ||||||||||||||| ||||  ||| | ||||||||||||||| ||||||||| |||||| ||||||||||    
T  34122506 tacgattttgccccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaagctcggtagttaactgcc 34122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 8702274 - 8702202
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||||||||||||||| |||| |||| ||| |||||||||||||  ||||||||||||||| ||||||||    
T  8702274 tcgacagttaactgccgaggaattaaaaatctgactgcagttaactgctgaggaaaacctcggtagttaactg 8702202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 37820891 - 37820787
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  || |||||||||| ||||||||| | |||||||||||||||| ||||||||| |||||| ||||| | |||  |||||||||||||    
T  37820891 gttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttccatttccattcaatccc 37820792  T
Q  230 caaat 234  Q
     ||||    
T  37820791 aaaat 37820787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 41799906 - 41799770
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||||||  |||||   | |||| ||||||||||||| |||||||||  ||||||||||||||| ||| ||||  ||| || ||||    
T  41799906 gagaattgttgttcccacatttgataagactgtgacacacgagtaatttacttttttgccccctcgacagttaactgctgaggaattagaaatctagctg 41799807  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    |||||||||| ||| |||||| ||||  |||||||||    
T  41799806 cagttaactgccgatgaaaacttcggaagttaactgc 41799770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 11033459 - 11033396
Alignment:
Q  145 atatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||||||||    
T  11033459 atatgtttcatcagatgaaatagccacctgctccccctacactctattttcttcatcaacttca 11033396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 18310161 - 18310051
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||  ||| || || |||||  ||||||||||||   ||  |||||||||| |||| ||||||| ||| | ||    
T  18310161 agagaattgttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgcctcctcagcagttaactgtcgaggaattcaataaccgact 18310062  T
Q  101 gcagttaactg 111  Q
    |||||||||||    
T  18310061 gcagttaactg 18310051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 17967026 - 17966889
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||  ||||||  ||||||  |||| | || |||||  |||| |||| |||  ||| |||||||||||||||||||| |||| | | ||    
T  17967026 agagaattgttgttcccacatttgataaggctgagaaacactagtaaaatacgattttaccccctcggcagttaactgccgagaaattaaaaatccgact 17966927  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    ||||||||||  ||||||||| |||||| |||||||||    
T  17966926 gcagttaactaccgaggaaaatctcggtagttaactgc 17966889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 3600269 - 3600404
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaatt-caaaaactggc 99  Q
    |||||||||||||||||||||| ||||| || ||| || || |||||  || ||||||||||  ||| ||||||||||||||  ||||  || |||  ||    
T  3600269 agagaattgttgttgacacatttcataaagttgagccacacaagtaaaatatgtttttgccccctcggcagttaactgccgaataattataataaccagc 3600368  T
Q  100 tgcagttaactgtcgaggaaaacctcggttgttaac 135  Q
    |||||||||||| | |||||||||||| | ||||||    
T  3600369 tgcagttaactgccaaggaaaacctcgatagttaac 3600404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 7757297 - 7757396
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||| | ||||||||||||  ||||||||||||||||||    ||  ||| | ||||||||||||||| |||||||||||||| | ||||||||||    
T  7757297 acgagtaaatgacgtttttgccccctcgacagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgctagttaactgcc 7757396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 13568214 - 13568095
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  |||||| |||||||  | | ||||||||||| | |||||||| |||  |||  |||||||||||||| ||||  ||| | |||||    
T  13568214 gagaattgttgttcccacattacataaggctgtgccatacgagtaaatgacgtttttaccccatcggtagttaactgccgaggaatttgaaatccggctg 13568115  T
Q  102 cagttaactgtcgaggaaaa 121  Q
    |||||||||| |||||||||    
T  13568114 cagttaactgccgaggaaaa 13568095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 25497523 - 25497582
Alignment:
Q  80 cgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||| |||||||||||||||| ||||||||| |||||| ||||||||||    
T  25497523 cgaggaattcaaaaattggctgcagttaactgccgaggaaaatctcggtagttaactgcc 25497582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 27532693 - 27532619
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||||| ||    ||||||| |||||||||||| ||||||||||||||||  ||||||||||    
T  27532693 tcgacagttaactgccgaggaaaaataaaactgactgcagttaactatcgaggaaaacctcggcagttaactgcc 27532619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 28886413 - 28886335
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaa 225  Q
    |||||||||| ||||||||| | |||||||||||||||| ||||||||| |||||| ||||| | || | |||||||||    
T  28886413 atgtttcatctgatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttcctcttccattcaa 28886335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 1397486 - 1397371
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||||  ||||||  ||||||| | | || ||||||||||||| |||||||||  ||| ||||||||||| ||| ||||  ||| | ||||||||    
T  1397486 aattgttgttcccacatttgataaggttgtggcacacgagtaatttacatttttgccccctcggcagttaactgctgaggaattagaaatccggctgcag 1397387  T
Q  105 ttaactgtcgaggaaa 120  Q
    ||||||| ||| ||||    
T  1397386 ttaactgccgatgaaa 1397371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 21979646 - 21979704
Alignment:
Q  148 tgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttc 207  Q
    ||||||||||||||||||| |||| ||||||||||||| |||| |||| |||||||||||    
T  21979646 tgtttcatcagatgaaacagccacatgctccccctacacacta-tttcctcatcaacttc 21979704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 30192488 - 30192563
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||||||| |  || || ||| |||||||||||||||||||||||||| ||||  ||||||||||    
T  30192488 ttcggcagttaactgccgaaattttaaagaaccggctgcagttaactgtcgaggaaaacttcggcagttaactgcc 30192563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 31094496 - 31094616
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactg-ccgagaaattcaaaaactggc 99  Q
    |||||||||||||||| |||||||||||||   || || ||||||||||||| |||||||||  |||  ||||||||| | | ||||||   |||| |||    
T  31094496 agagaattgttgttgatacattgcataaggcttaggcacacgagtaatttacatttttgccccctcggtagttaactgtcggggaaatt--gaaaccggc 31094593  T
Q  100 tgcagttaactgtcgaggaaaac 122  Q
    |||||||||||| ||| ||||||    
T  31094594 tgcagttaactgccgaagaaaac 31094616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 42098304 - 42098371
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    ||||||||||||||| ||    ||||||||||||||||||||| |||||||||||||||  |||||||    
T  42098304 cagttaactgccgaggaaaaataaaactggctgcagttaactgccgaggaaaacctcggcggttaact 42098371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 7017509 - 7017583
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||| ||| ||||  ||| | |||||||||||||| || |||||||||||||| ||||||||||    
T  7017509 tcgatagttaactgctgaggaatttgaaatccggctgcagttaactctcaaggaaaacctcggtagttaactgcc 7017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 19037514 - 19037472
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  19037514 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 19037472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 42539464 - 42539374
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcca 140  Q
    ||||||||||||| || |  || |||||| ||||||||| ||||   ||||||||||||||| |||||||||| | ||| |||||||||||    
T  42539464 tacgtttttgccccttaggtagctaactgtcgagaaattaaaaattcggctgcagttaactgccgaggaaaactttggtagttaactgcca 42539374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 24053117 - 24053234
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||   ||||||| |||||| |  | |||  ||||||||||  |  ||| ||||||| ||||||| ||||||||||| | ||||||    
T  24053117 aattgttgttgacacatatgataaggtcgagacacataaataaaatacgtttttgttctctcggcagttaaatgccgagtaattcaaaaaccgtctgcag 24053216  T
Q  105 ttaactgtcgaggaaaac 122  Q
    ||||||| |||| |||||    
T  24053217 ttaactgccgagaaaaac 24053234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 38855760 - 38855711
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||||    
T  38855760 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgccaa 38855711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 38968097 - 38968166
Alignment:
Q  70 agttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||| ||||| |||  |||| | ||||||||||||||| |||||||||||||| | ||||||||||    
T  38968097 agttaactaccgaggaataaaaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgcc 38968166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 39743234 - 39743162
Alignment:
Q  55 ttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcgg 127  Q
    ||||||||  ||||||||||||||||||| ||||  |||   | ||||||||||||| |||||||||||||||    
T  39743234 ttttgccccctcgacagttaactgccgaggaatttgaaattcgactgcagttaactgccgaggaaaacctcgg 39743162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 8680381 - 8680260
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||||||||||  | | || |||||||||||||     ||||| |||| |||||||||||||   ||||    ||| |||||    
T  8680381 gagaattgttgttgacacattgcataaggctgtgtcacacgagtaatttacccaaatgccc-ttcggcagttaactgccg---aattatggaacaggctg 8680286  T
Q  102 cagttaactgtcgaggaaaacctcgg 127  Q
    ||||||||| ||||||||||| ||||    
T  8680285 cagttaactatcgaggaaaacttcgg 8680260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 11346037 - 11346076
Alignment:
Q  98 gctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  11346037 gctgcagttaactgccgaggaaaacctcggtagttaactg 11346076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 13837748 - 13837795
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  13837748 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 13837795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 14279903 - 14279950
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactatttt 194  Q
    |||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  14279903 atgtttcatccgatgaaacagctacctgctccccctacacactatttt 14279950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 19228782 - 19228671
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||||||||||||  ||||||  |||||| || |||||  |||||   |||||  ||| ||||||||||||||  |||| |||||| || |||||    
T  19228782 aattgttgttgacacatttgataaggctgagacacacaagtaaaatacgtaaatgccccctcggcagttaactgccgatgaattaaaaaaccggatgcag 19228683  T
Q  105 ttaactgtcgag 116  Q
    ||||||| ||||    
T  19228682 ttaactgccgag 19228671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 28238163 - 28238210
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  28238163 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 28238210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 42099154 - 42099087
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    |||||||||| |||||||    ||||||||||| |||||||| ||||||||||||||||  |||||||    
T  42099154 cagttaactgtcgagaaaaaataaaactggctgtagttaactatcgaggaaaacctcggcagttaact 42099087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 25499978 - 25499904
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacct 124  Q
    |||| ||||||||  ||| |||||||||  |||| ||||||||||| || ||| |||||||| ||||||||||||    
T  25499978 tacgcttttgccccctcggcagttaactatcgaggaattcaaaaaccggttgcggttaactgccgaggaaaacct 25499904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26366821 - 26366867
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaa 47  Q
    |||||||||||||||| |||||||||||||  |||||| ||||||||    
T  26366821 agagaattgttgttgatacattgcataaggctgagacacacgagtaa 26366867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 42537135 - 42537216
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgag 83  Q
    ||||||||||||| |||||||  ||||||  |||| | ||||||||  ||| |||||||||  ||| |||||||||||||||    
T  42537135 gagaattgttgttcacacatttgataaggctgagaaacacgagtaaaatacatttttgccccatcggcagttaactgccgag 42537216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 5807 - 5847
Alignment:
Q  99 ctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| || |||||||||||||||| ||||||||||    
T  5807 ctgcagttaattgccgaggaaaacctcggtagttaactgcc 5847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 512875 - 512799
Alignment:
Q  6 attgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccga 82  Q
    |||||||||||||||||  ||||||| || | | || |||||  ||||||||||||   ||||||||||||||||||    
T  512875 attgttgttgacacatttgataaggttgataaacacaagtaaagtacgtttttgcctcctcgacagttaactgccga 512799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 4434376 - 4434332
Alignment:
Q  67 gacagttaactgccgagaaattcaaaaactggctgcagttaactg 111  Q
    ||||||||||||||||| || || ||||| |||||||||||||||    
T  4434376 gacagttaactgccgaggaagtccaaaaccggctgcagttaactg 4434332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 24050039 - 24050095
Alignment:
Q  80 cgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    |||| ||||||||||| ||||||| |||||||  ||||||||| ||||| |||||||    
T  24050039 cgaggaattcaaaaaccggctgcacttaactgctgaggaaaacgtcggtagttaact 24050095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 30708898 - 30708974
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaa-ctggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||||||| |  || ||||| | ||||||||||||||| ||||| |||||||||  ||||||||||    
T  30708898 ttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgagggaaacctcgggagttaactgcc 30708974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 35926391 - 35926435
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||    
T  35926391 ggctacagttaactaccgaggaaaacctcggtagttaactgccaa 35926435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 41798805 - 41798889
Alignment:
Q  55 ttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||  ||| ||||||||||| ||  ||||  ||| | ||||||||||||||| ||| |||||||||||| |||| |||||    
T  41798805 ttttgccccctcggcagttaactgctgaagaatttgaaatccggctgcagttaactgccgaagaaaacctcggtagttatctgcc 41798889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 43177966 - 43177918
Alignment:
Q  72 ttaactgccgagaaattcaaaaact-ggctgcagttaactgtcgaggaa 119  Q
    ||||||||||||||||||||||| | |||  ||||||||||||||||||    
T  43177966 ttaactgccgagaaattcaaaaattcggcgacagttaactgtcgaggaa 43177918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 45475377 - 45475605
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||| |||||||||||| |||||||  |||||| || |||||  |||| ||||||||  ||| ||||||||||||||||||||||||||| |||| |||    
T  45475377 aattgatgttgacacatttcataaggctgagacacacaagtaaaatacgattttgccccctcggcagttaactgccgagaaattcaaaaaccggctacag 45475476  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||||| |||||||||||||||| ||||||| || | || ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  45475477 ttaactgccgaggaaaacctcggtagttaacttccgagaattatgtttcatcagatgaaacagccacctgctccccctacatacta-tttcatcatcaac 45475575  T
Q  205 ttcaataccacctccattcaatccccaaat 234  Q
    ||  ||||||| ||||| ||| ||||||||    
T  45475576 tttcataccacttccatccaaaccccaaat 45475605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 41183273 - 41183131
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||||||||||||||  |||||||||||||||| |||||||||| |  || |||||||||||||||||||| ||||||||||||||||||||||||    
T  41183273 aaaccggctgcagttaactaccgaggaaaacctcggtagttaactgccgaggaaaatgtttcatcagatgaaacagccacctgctccccctacatactat 41183174  T
Q  192 tttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41183173 tttcatcatcaacttcaataccacctccattcaatccccaaat 41183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 435280 - 435508
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||| || |||||   ||| || |||||||||||||||||||||||  | | ||||||||||||||  ||||  ||| | ||||||||    
T  435280 aattgttgttgacacactgtataagactgaggcacacgagtaatttacgtttttgcccccttggcagttaactgccgatgaatttgaaatc-ggctgcag 435378  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    | ||||  |||||||||||||| | ||| |||||| | |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  435379 taaactaccgaggaaaacctcgatagttgactgccgagaaatatgtttcatcagatgaaacagccacctgctccccctacacactattttcatcatcaac 435478  T
Q  205 ttcaataccacctccattcaatccccaaat 234  Q
    |||||||| || ||||| ||||||||||||    
T  435479 ttcaatactacttccatccaatccccaaat 435508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 41009067 - 41008835
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||  ||||||||||  |||||   |||||| ||||||||||||||||||||||   ||| ||||||||||||||| ||||   || | ||||    
T  41009067 agagaattgtcattgacacatttgataagaccgagacacacgagtaatttacgtttttgcctcctcggcagttaactgccgaggaatttgtaacc-ggct 41008969  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||| ||||||| |||||||||| ||||| |||||||||| | ||||||||||||| |||||||||| |||| ||||||||||||| ||||||||||||||    
T  41008968 gcatttaactgccgaggaaaacttcggtagttaactgccgagaaatatgtttcattagatgaaacagccacatgctccccctacacactattttcatcat 41008869  T
Q  201 caacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||| || ||||| ||||||||||||    
T  41008868 caacttcaatactacttccatccaatccccaaat 41008835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 24607708 - 24607486
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||  ||| || ||  ||||||||||||||| |||  ||  ||||||||||||||  | || |||||| ||||    
T  24607708 agagaattgttgttgacacattgcataaggctgaggcacacaggtaatttacgttttttccccctcagcagttaactgccgaagatttaaaaaaccggct 24607609  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||||||||||| ||||||||           |||||| | |  |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  24607608 gcagttaactgccgaggaaa-----------taactgtcgaggaatatgtttcatcaaatgaaacagtcacctgctccccctacatactattttcatcat 24607520  T
Q  201 caacttcaataccacctccattcaatccccaaat 234  Q
    ||||||||||||||||||||||||||||||||||    
T  24607519 caacttcaataccacctccattcaatccccaaat 24607486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 92 - 238
Target Start/End: Complemental strand, 41053617 - 41053471
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||||||||||||||| |||||||| | ||||| |||||||||| |  |||||||||||| ||||||||||||||| || |||||||| |||||||    
T  41053617 aaaccggctgcagttaactggcgaggaaatcatcggtagttaactgccgaggaatatgtttcatgagatgaaacaaccacatgttccccctatatactat 41053518  T
Q  192 tttcatcatcaacttcaataccacctccattcaatccccaaattcaa 238  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  41053517 tttcatcatcaacttcaataccaccttcattcaatccccaaattcaa 41053471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 34921886 - 34921694
Alignment:
Q  13 ttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgt 112  Q
    |||||||||| |||||||  |||| | ||||||||  |||||||||||||   ||  |||||||||||||||||||||||||| |||||||||||||||     
T  34921886 ttgacacatttcataaggcagagaaacacgagtaaaatacgtttttgccccc-cggtagttaactgccgagaaattcaaaaaccggctgcagttaactgc 34921788  T
Q  113 cgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttc 207  Q
     ||||||||||||||| |||||||||| | || |||||||||| |||||||| | |||| |||||||||||||||||| ||||||||||||||||    
T  34921787 tgaggaaaacctcggtagttaactgccgagaattatgtttcattagatgaaatagccacatgctccccctacatacta-tttcatcatcaacttc 34921694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 43950380 - 43950147
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||| |||||||||||||||  ||||||  |||| | ||||||||  ||| |||||||||  ||| ||||||||||| | | ||||||||| | | |||    
T  43950380 gagaactgttgttgacacatttgataaggctgagaaacacgagtaaaatacatttttgccccctcggcagttaactgctgtggaattcaaaacc-gactg 43950282  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatc 201  Q
    || ||||||| ||||||||  | |||  |||||||||| |||| ||| |||||||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  43950281 caattaactgccgaggaaa--cgcgggagttaactgccgaaaattatatttcatcagatgaaacagacacctactccccctacacactattttcatcatc 43950184  T
Q  202 aacttcaataccacctccattcaatccccaaattcaa 238  Q
    |||||| ||||||| ||||| ||||||||||||||||    
T  43950183 aacttccataccacttccatccaatccccaaattcaa 43950147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 19187359 - 19187144
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||| | ||||  |||||||  |||||| || |||||  |||||||||||||  ||| ||||||||||||||||||||||||| |  | |||||    
T  19187359 aattgttgttcagacatatcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattcaaaatccagttgcag 19187260  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||| ||| |||||||||||||||| |||||||||| | |||||||||||||| |||||||||  ||| || |||| ||||| |||| |||||||||||||    
T  19187259 ttacctgccgaggaaaacctcggtagttaactgccgagaaatatgtttcatcggatgaaacagtcacttgttcccactacacacta-tttcatcatcaac 19187161  T
Q  205 ttcaataccacctccat 221  Q
    ||| ||||||| |||||    
T  19187160 ttccataccacttccat 19187144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 41497406 - 41497555
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| | ||||||||||||||||||  ||| || ||||||||||||||||||||||   |||||| |||||||||||  ||||||||||| |||||    
T  41497406 gagaattgctcttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccacctcgacacttaactgccgaagaattcaaaaaccggctg 41497505  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtt 151  Q
    ||||||| || |||||||||||||||| ||||||| ||||||||||||||    
T  41497506 cagttaattgccgaggaaaacctcggtagttaactaccaaaaaatatgtt 41497555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 62 - 234
Target Start/End: Complemental strand, 12908508 - 12908337
Alignment:
Q  62 cattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatg 161  Q
    |||||| |||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| | | |||||||||| | || ||||||||||||| ||    
T  12908508 cattcggcagttaactgtcgagaaattcaaaaattggctgcagttaactgccgaggaaaaccttgatagttaactgccgagaattatgtttcatcagttg 12908409  T
Q  162 aaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||  |||||||||||||||||   || |||||||||||||||| ||||||| || || ||| ||||||||    
T  12908408 aaacaggcacctgctccccctacacgtta-tttcatcatcaacttccataccacttcaatccaaaccccaaat 12908337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 35493481 - 35493338
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||  |||| ||||||||  |||  |||||||||||||| |||||||||||  |||    
T  35493481 agagaattgttgttgacacattgcataaggttgagacacacgagtaaaatacgcttttgccccctcggtagttaactgccgaggaattcaaaaaccagct 35493382  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    ||||||||||| |||||||||  ||||| |||||||||| ||||    
T  35493381 gcagttaactgccgaggaaaatatcggtagttaactgccgaaaa 35493338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 27276446 - 27276285
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||| ||| ||||  ||| | ||||||||||||||| |||||||||||||||  ||||| |||| |  || |||||||||   |||||||| |    
T  27276446 cagttaactgctgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaattgccgaggaa-atgtttcat---atgaaacagc 27276351  T
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    ||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| ||||    
T  27276350 cacctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaat 27276285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 7263042 - 7263156
Alignment:
Q  93 aactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactatt 192  Q
    |||| |||||||||||||| |||||||| ||||||  |||||||||| |  || |||||||||||||||||||| |||||||||||||||||| ||||||    
T  7263042 aactcgctgcagttaactgccgaggaaatcctcgggagttaactgccgaggaa-atgtttcatcagatgaaacagccacctgctccccctacacactatt 7263140  T
Q  193 ttcatcatcaacttca 208  Q
    ||| ||||||||||||    
T  7263141 ttcttcatcaacttca 7263156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 28342460 - 28342594
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||||||||||||||||||||   ||||| |  |||||||||||||||||||| |||| |||||||||| |||  ||||||||||| |||||||     
T  28342460 aattgttgttgacacattgcataaggctaagacacataagtaatttacgtttttgccccttcggcagttaactgtcgaagaattcaaaaaccggctgcaa 28342559  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| ||||||||  || ||| ||||||||||    
T  28342560 ttaactgccgaggaaattcttggtagttaactgcc 28342594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 25184968 - 25184832
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||||| |||||||||||| ||| || ||||||||  |||||||||||||  ||  |||||||||| |||| ||||   |||| |||||    
T  25184968 gagaattgttgttgacagattgcataaggttgaggcacacgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaatt-tgaaaccggctg 25184870  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  25184869 cagttaactgccgaggaaaacctcggtagttaactgcc 25184832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 1101089 - 1100986
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  || |||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1101089 gttaactgccgaggaaaatgtttcatcagatgaaaaagtcacctgctcccc-tacatactattttcatcatcaacttcatttccacctccattcaatccc 1100991  T
Q  230 caaat 234  Q
    |||||    
T  1100990 caaat 1100986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 2917620 - 2917752
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  ||| || |  |||||  |||||||||||||  ||| |||||||||||||||||||| |||||| |||| |||    
T  2917620 aattgttgttgacacatttcataaggctgaggcacaaaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattgaaaaaccggctacag 2917719  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||| ||||||||||||| || ||||||||    
T  2917720 ttaactgccgaggaaaacctcagtagttaactg 2917752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 9651256 - 9651331
Alignment:
Q  159 atgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9651256 atgaaacaaccacctgctccctatatatactattttcatcatcaacttcaataccacctccaatcaatccccaaat 9651331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 9660195 - 9660057
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||| |||||||||||||||||| |  |||  | ||||||||||||| |||||||||  ||| ||||||||||||||| ||| ||| ||| ||||    
T  9660195 agagaattgctgttgacacattgcataaagctgaggtacacgagtaatttacttttttgccctctcggcagttaactgccgaggaatacaataaccggct 9660096  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||| |||| |||||||||||| ||| ||||| ||||    
T  9660095 gcagttgactgccgaggaaaaccttggtagttaattgcc 9660057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 41181371 - 41181491
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| ||||||||||||||||||||  ||| || ||||||||  |||||||||||||  ||| ||||||||||||||| ||||||| ||| ||||     
T  41181371 gagaattgatgttgacacattgcataaggctgaggcacacgagtaaaatacgtttttgccccctcggcagttaactgccgaggaattcaataaccggcta 41181470  T
Q  102 cagttaactgtcgaggaaaac 122  Q
    || ||||||| ||||||||||    
T  41181471 catttaactgccgaggaaaac 41181491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 35490625 - 35490751
Alignment:
Q  13 ttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgt 112  Q
    ||||||||||||||||||  |||||| ||||||||  ||| ||||||||   ||||| ||||||||||||  ||||||||||| |||||||||||||||     
T  35490625 ttgacacattgcataaggctgagacacacgagtaaaatacatttttgcctcctcgacggttaactgccgaagaattcaaaaaccggctgcagttaactgc 35490724  T
Q  113 cgaggaaaacctcggttgttaactgcc 139  Q
     || |||||||| ||| ||||||||||    
T  35490725 tgaagaaaaccttggtagttaactgcc 35490751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 41053807 - 41053690
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||||||||||| |||||||  ||| ||  |||||||||||||||||||||   |||||||||||||| | ||||||| | |||| |||||    
T  41053807 gagaattgctgttgacacattacataaggctgaggcacgcgagtaatttacgtttttgcctcctcgacagttaactgtccagaaattaagaaaccggctg 41053708  T
Q  102 cagttaactgtcgaggaa 119  Q
    |||||||||| |||||||    
T  41053707 cagttaactggcgaggaa 41053690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 24601611 - 24601710
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||| |||||| ||||||||  ||||||||| |||| |||| |||||||||||||||||||||  |||||||| | ||||| ||||||||||    
T  24601611 acgagtaatttatgttttttcccattcggtagttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaatcttcggtagttaactgcc 24601710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 24612503 - 24612404
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||| |||||| ||||||||  ||||||||| |||| |||| |||||||||||||||||||||  |||||||| | ||||| ||||||||||    
T  24612503 acgagtaatttatgttttttcccattcggtagttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaatcttcggtagttaactgcc 24612404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 1149555 - 1149624
Alignment:
Q  168 ccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaa 238  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||    
T  1149555 ccacctgctccccctacatactattttcatcatcaacttcatttccacct-cattcaatcccaaaattcaa 1149624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 20951067 - 20951006
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  20951067 atgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttca 20951006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 23409586 - 23409498
Alignment:
Q  56 tttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    |||||||  ||| ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||  || ||||||| ||||    
T  23409586 tttgccctctcggcagttaattgccgaggaattcaaaaactggctgcagttaactgccgaggaaaacctcggaagtaaactgccgaaaa 23409498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 29397882 - 29397981
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||| |||||||||  ||||||||||| ||| ||||||||  ||| | | ||||||||||||| |||||||||||||||  ||||||||||    
T  29397882 acgagtaatttacttttttgccctatcgacagttaattgctgagaaattagaaatccgactgcagttaactgccgaggaaaacctcgggagttaactgcc 29397981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 39794039 - 39794102
Alignment:
Q  145 atatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||    
T  39794039 atatgtttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttca 39794102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 23346714 - 23346851
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||||||||| |||||||  ||||||| | | || |||||||| | |||||||||||| |||| ||||||||||||||    ||  ||| | ||||    
T  23346714 agagaattgttgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttgccc-ttcggcagttaactgccgaagttttataaatccggct 23346812  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| | |||||||||||||| ||||||||||    
T  23346813 gcagttaactgccaaggaaaacctcggtagttaactgcc 23346851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 3803564 - 3803503
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  3803564 atgtttcattagatgaaacagccacctgctccccctacacactattttcttcatcaacttca 3803503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 41500373 - 41500236
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||||||||||| |||| ||  |||| | ||||||||  |||| ||||||||  ||| |||||||||  | |  ||||||||| | |||||    
T  41500373 gagaattgatgttgacacatttcatatggctgagaaacacgagtaaaatacgcttttgccccctcggcagttaactatcaaagaattcaaaatccggctg 41500274  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||| ||||||||||| ||||||||||    
T  41500273 cagttaactgccgagaaaaacctcggtagttaactgcc 41500236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 19186684 - 19186804
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||  |||||||  |||||| || |||||  ||||||||| |||  ||| |||| |||||||||| ||||||||||  ||||||||    
T  19186684 aattgttgttgacacatatcataaggctgagacacacaagtaaaatacgtttttaccccatcggcagtaaactgccgagcaattcaaaaagcggctgcag 19186783  T
Q  105 ttaactgtcgaggaaaacctc 125  Q
    |||||||   |||||||||||    
T  19186784 ttaactgctaaggaaaacctc 19186804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 24749751 - 24749823
Alignment:
Q  171 cctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaagtttt 243  Q
    ||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| |||| ||| ||||    
T  24749751 cctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttt 24749823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 139
Target Start/End: Complemental strand, 34639412 - 34639316
Alignment:
Q  43 agtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||||||||  ||| ||| |||||||||||||||| |||| | |||||||||||||||  ||||||||| ||||  ||||||||||    
T  34639412 agtaatttacttttttgccccctcggcaggtaactgccgagaaattaaaaatccggctgcagttaactgctgaggaaaacatcgggagttaactgcc 34639316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 41004464 - 41004599
Alignment:
Q  3 agaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgc 102  Q
    ||||| ||||||||||||||| ||||||  ||  ||||||||||||||||||||||||    ||| ||||||||||||||| ||||    ||| ||||||    
T  41004464 agaatcgttgttgacacattgtataaggctgatgcatacgagtaatttacgtttttgcttcctcggcagttaactgccgaggaatt-tgtaaccggctgc 41004562  T
Q  103 agttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||| |||  ||||| ||||| ||||||||||    
T  41004563 agttaactgccgaaaaaaacttcggtagttaactgcc 41004599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 43491109 - 43491180
Alignment:
Q  68 acagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||| |||| || ||| ||||||| |||||||||||||||||||| ||| ||||||||||    
T  43491109 acagttaactgccgaggaatttaataaccggctgcaattaactgtcgaggaaaaccttggtagttaactgcc 43491180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 7190090 - 7189953
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||| ||||  |||||| |||||||| | | || |||||||| |||||||||||||| | || ||||||||||||||    ||  ||| | ||||    
T  7190090 agagaattgatgttcccacattacataaggttgtgccacacgagtaaattacgtttttgcccct-cggcagttaactgccgaagttttagaaatccggct 7189992  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||| ||||| ||||||||||    
T  7189991 gcagttaactgccgaggaaaacttcggtagttaactgcc 7189953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 82401 - 82265
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||| ||||||||||||||||||||||||||   | || ||||||||  ||||||||||     |||  ||||||||| |||| ||||  ||| | ||||    
T  82401 agaggattgttgttgacacattgcataaggttatgtcacacgagtaaaatacgtttttgtttcctcggtagttaactgtcgagtaatttgaaacc-ggct 82303  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    ||||||||||||||||||||||||| || |||||||||    
T  82302 gcagttaactgtcgaggaaaacctccgtagttaactgc 82265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 29093971 - 29093830
Alignment:
Q  3 agaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaa-----ctg 97  Q
    ||||||||||||  |||||| |||||||  | | || |||||||||||||  ||||||||  |||||||||||||||||| ||||| |||||     |||    
T  29093971 agaattgttgttcccacattacataaggctgtggcacacgagtaatttactcttttgccccctcgacagttaactgccgataaatttaaaaatccggctg 29093872  T
Q  98 gctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
     |||||||||| || |||||||||||| ||  ||||||||||    
T  29093871 actgcagttaattgccgaggaaaaccttggcagttaactgcc 29093830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 18003321 - 18003219
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||  |||||||  ||||||| |||||||||| |  || |||||||||| ||||||||| | ||||||||||||| || |||||    
T  18003321 aaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctgcacactat 18003222  T
Q  192 ttt 194  Q
    |||    
T  18003221 ttt 18003219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 38945798 - 38945876
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||| |  || |||||||||| ||||||||| | |||||||||||||||| ||||||||| |||||| |||||    
T  38945798 gttaactgccgaggaaaatgtttcatctgatgaaacagctacctgctccccctacacactattttcttcatcaccttca 38945876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 43943690 - 43943760
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||  |||| |||| || ||| ||||||||||||||||||||||||| |||||| ||||||||||    
T  43943690 cagttaactctcgaggaatttaataaccggctgcagttaactgtcgaggaaaaactcggtagttaactgcc 43943760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 16580479 - 16580552
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaa 75  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||  ||| ||||||||   |||||||||||    
T  16580479 gagaattgttgttgacacattgcataaggctgagacacacgagtaaaatacatttttgcctcctcgacagttaa 16580552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 24512101 - 24512238
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| | |||||||||| |||| ||  |||| | || |||||  ||||||||| |||  ||||||||||||||  ||| |||| ||||||  ||||    
T  24512101 gagaattgctcttgacacatttcatatggctgagaaacacaagtaaaatacgtttttaccccctcgacagttaactgttgaggaattaaaaaaccagctg 24512200  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| || |||  ||||||||||| ||||||||||    
T  24512201 cagttaattgccgaaaaaaacctcggtagttaactgcc 24512238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 2648780 - 2648852
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaac 122  Q
    |||| ||||||||  ||| |||||||||||| || ||||||||||| ||||||||||||||  ||||||||||    
T  2648780 tacgcttttgccctctcggcagttaactgccaaggaattcaaaaaccggctgcagttaactaccgaggaaaac 2648852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 28477111 - 28477067
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  28477111 ggctgcagttaactgccgaggaaaacctcggtagttaactgccaa 28477067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1149405 - 1149532
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||  ||||||  ||||||| | | || || |||||  |||| |||||| |  ||| ||||||||||||||| ||||  ||| | |  |    
T  1149405 agagaattgttgttcccacatttgataaggttgtgccacactagtaaaatacgattttgctccctcggcagttaactgccgaggaatttgaaatccgatt 1149504  T
Q  101 gcagttaactgtcgaggaaaacctcggt 128  Q
    ||||||||||||||||||||||||||||    
T  1149505 gcagttaactgtcgaggaaaacctcggt 1149532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 213501 - 213399
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||  |||||||  ||||||| |||||||||| |  || |||||||||  ||||||||| | |||||||||||||||| | |||    
T  213501 aaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgaggaaaatgtttcatacgatgaaacagctacctgctccccctacacattat 213402  T
Q  192 ttt 194  Q
    |||    
T  213401 ttt 213399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 10624514 - 10624412
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||  |||||||  ||||||| |||||||||| |   | |||||||||  ||||||||| | |||||||||||||||| |||||    
T  10624514 aaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactat 10624415  T
Q  192 ttt 194  Q
    |||    
T  10624414 ttt 10624412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 14181894 - 14181836
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcgg 127  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || ||||||||||||    
T  14181894 cagttaactgccaaggaattcaaaaaccgtctgcagttaactgccgtggaaaacctcgg 14181836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 17424161 - 17424203
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  17424161 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 17424203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 17911169 - 17911243
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    |||||||||||||||||||| || || ||||| |||||||||||| |  ||||||||||||| |  |||||||||    
T  17911169 ttcgacagttaactgccgaggaagtccaaaaccggctgcagttaattaccgaggaaaacctcagcagttaactgc 17911243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 41052614 - 41052696
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgag 83  Q
    |||||||||||||||||| |||||||||||  ||  || || ||||||||||||||||| ||  ||| ||||||| |||||||    
T  41052614 agagaattgttgttgacatattgcataaggctgatgcacacaagtaatttacgtttttgtcccctcggcagttaattgccgag 41052696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 42177286 - 42177216
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||| |||| |||||| |||||||  | |||||||| ||||| ||||||||||    
T  42177286 cagttaactgccgaggaattcataaaccggctgctgttaactacctaggaaaacttcggtagttaactgcc 42177216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 43982228 - 43982270
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  43982228 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 43982270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 12905492 - 12905597
Alignment:
Q  11 tgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaact 110  Q
    |||||||||||| |||||||  |||| | | ||||||  |||| ||||  ||  ||| |||||||||||||||||||| |||||  ||||||||||||||    
T  12905492 tgttgacacatttcataaggctgagaaacaagagtaaaatacgcttttttcccctcggcagttaactgccgagaaattgaaaaatcggctgcagttaact 12905591  T
Q  111 gtcgag 116  Q
    | ||||    
T  12905592 gccgag 12905597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 14456503 - 14456570
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    ||||||||||||||| ||    ||||| ||||||||||||||| |||||||||||||||  |||||||    
T  14456503 cagttaactgccgagcaaaaataaaaccggctgcagttaactgccgaggaaaacctcggcagttaact 14456570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 22003450 - 22003403
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  22003450 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 22003403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 25964822 - 25964877
Alignment:
Q  79 ccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaa 134  Q
    ||||| |||| |||| | ||||||||||||||| |||||||||||||||| |||||    
T  25964822 ccgaggaattaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaa 25964877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 28468665 - 28468712
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  28468665 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 28468712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 3795338 - 3795408
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||| ||||  ||| | ||||||||||||||| |||||||||||| ||  ||||||||||    
T  3795338 cagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaaccttggaagttaactgcc 3795408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 3943236 - 3943194
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||    
T  3943236 ggctgcagttaactgccgagaaaaacctcggtagttaactgcc 3943194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 40156396 - 40156470
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||| |  || |||||| ||||||||||||||| |||||||||| |||   ||||||||||    
T  40156396 tcgacagttaattgccgaaattttgaaaaaccggctgcagttaactgacgaggaaaacttcgacagttaactgcc 40156470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 2271780 - 2271739
Alignment:
Q  98 gctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||||||||||| ||||  ||||||||||    
T  2271780 gctgcagttaactgtcgaggaaaacttcggcagttaactgcc 2271739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 15488281 - 15488252
Alignment:
Q  2 gagaattgttgttgacacattgcataaggt 31  Q
    ||||||||||||||||||||||||||||||    
T  15488281 gagaattgttgttgacacattgcataaggt 15488252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 18000256 - 18000301
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||    
T  18000256 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactg 18000301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 24541732 - 24541805
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    |||| ||||||||||| ||| || || |||||||||| |||||||||  ||| |||||||||||  ||||||||    
T  24541732 ttcggcagttaactgcagaggaagtctaaaactggcttcagttaacttccgaagaaaacctcggcagttaactg 24541805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 41564541 - 41564492
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    |||| ||| ||||||||||| |||||||||||||||| |||||| |||||    
T  41564541 aaaccggcggcagttaactgccgaggaaaacctcggtagttaacggccaa 41564492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 43536136 - 43536173
Alignment:
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  43536136 cagttaactgccgaggaaaacctcggtagttaactgcc 43536173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 45479930 - 45479841
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaa 94  Q
    |||||||||||||||||| |||||||   ||| | | ||||||  |||| |||||| |  ||| |||||||||||||||||||| |||||    
T  45479930 aattgttgttgacacatttcataaggctcagaaacatgagtaaaatacgattttgctctctcggcagttaactgccgagaaattaaaaaa 45479841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 1096577 - 1096649
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaac 122  Q
    |||| ||||||||  ||| | ||||||||||||| ||||  ||| | ||||||||||||||| ||||||||||    
T  1096577 tacgattttgccccctcggctgttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 1096649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 5351770 - 5351734
Alignment:
Q  103 agttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  5351770 agttaactgccgaggaaaacctcggtagttaactgcc 5351734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 34918434 - 34918506
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaac 122  Q
    |||||||||||||  ||| |||||||||   ||| |||| |||||| ||||| | ||||||||||||||||||    
T  34918434 tacgtttttgccccctcgtcagttaactattgagtaattgaaaaaccggctgtaattaactgtcgaggaaaac 34918506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 38945763 - 38945815
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaa 121  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||||    
T  38945763 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 38945815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 43870260 - 43870180
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccga 82  Q
    |||||||| ||||  |||||| |||||||| | | || |||||||| | ||||||||||||  ||| ||||||||||||||    
T  43870260 gagaattgatgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccccatcggcagttaactgccga 43870180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 44100847 - 44100803
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    |||| ||| ||||||||||| |||||||||||||||| |||||||    
T  44100847 aaaccggcggcagttaactgccgaggaaaacctcggtagttaact 44100803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 9e-58; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 47060860 - 47061092
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||| ||||||||| ||| |||||||  ||| ||||| |||||  |||||||||||||  ||| |||||||||| |||| ||||||||| | ||||    
T  47060860 agagaattattgttgacatatttcataaggctgaggcatacaagtaaaatacgtttttgccccctcggcagttaactgtcgaggaattcaaaatc-ggct 47060958  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    | ||||||||| |||||||||||||||| |||||||||| | |||||||||||||||||||||||| ||||||  ||| |||||| ||||||||||||||    
T  47060959 gtagttaactgccgaggaaaacctcggtagttaactgccgagaaatatgtttcatcagatgaaacagccacctcttcctcctacacactattttcatcat 47061058  T
Q  201 caacttcaataccacctccattcaatccccaaat 234  Q
    ||||||| ||||||| ||||| ||||||||||||    
T  47061059 caacttccataccacttccatccaatccccaaat 47061092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 18105397 - 18105539
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||| |||||||||||||||| |||||||||| |  || |||||||||| ||||||||||| |||||||||||||||| |||||    
T  18105397 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaatgtttcatccgatgaaacaactacctgctccccctacacactat 18105496  T
Q  192 tttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||| |||||| ||||| | |||||||||||||||||| ||||    
T  18105497 tttcttcatcaccttcatttccacctccattcaatcccaaaat 18105539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 34622433 - 34622572
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||||||||||  ||| || || ||||||||||||||||||||  | ||||||||||||| ||| |||| | |||| | |||    
T  34622433 gagaattgttgttgacacattgcataaggctgaggcacacaagtaatttacgtttttgcccccttgacagttaactgcagaggaattaagaaaccgactg 34622532  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    ||||||||||||||||||| ||||||| |||||| |||||    
T  34622533 cagttaactgtcgaggaaatcctcggtagttaacagccaa 34622572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 42499342 - 42499548
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||  |||||   ||||||| | | || || |||||  |||| |||| ||| |||||||||||| ||||||| ||||  ||| | | ||    
T  42499342 agagaattgttgttcccacatgtgataaggttgtgtcacaccagtaaaatacgattttaccccttcgacagttaattgccgaggaatttgaaatccgact 42499441  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||||||||||| |||||||||||||||| |||||||||| |  | |||||||||||||||||||||  ||||||||||||||||| | ||||||| ||||    
T  42499442 gcagttaactgccgaggaaaacctcggtagttaactgccgagga-tatgtttcatcagatgaaacagtcacctgctccccctacacattattttcttcat 42499540  T
Q  201 caacttca 208  Q
    ||||||||    
T  42499541 caacttca 42499548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 47741816 - 47741903
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||    
T  47741816 atgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatcaacttcatttccacctccattcaatcccaaaat 47741903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 34623519 - 34623380
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||||||| |||||||||||| |||||| ||||||||||||||||||||||   ||| ||||||||||||||| |||| | | |  |||||    
T  34623519 gagaattgctgttgacatattgcataaggttgagacacacgagtaatttacgtttttgcctcatcggcagttaactgccgaggaattaagagatcggctg 34623420  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    |||||||||| |||||||| ||||||| |||||| |||||    
T  34623419 cagttaactgccgaggaaatcctcggtagttaacagccaa 34623380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 48314607 - 48314749
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||| |||  | || |||||  ||| ||||||||| | || ||||||||||||||| ||||||| ||| ||||    
T  48314607 agagaattgttgttgacacattgcataaggttgaggtacacaagtaaaatacatttttgcccct-cggcagttaactgccgaggaattcaataaccggct 48314705  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    ||||||||||  ||| ||||||||||||  ||||||||||||||    
T  48314706 gcagttaactaccgacgaaaacctcggtacttaactgccaaaaa 48314749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 46863484 - 46863374
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||| ||||||||||||  |||||| || |||||  |||||||||||||  ||| |||||||||||||||||||| |||||| ||||    
T  46863484 agagaattgttgttgacgcattgcataaggctgagacacacaagtaaaatacgtttttgccccatcggcagttaactgccgagaaattgaaaaaccggct 46863385  T
Q  101 gcagttaactg 111  Q
    |||||||||||    
T  46863384 gcagttaactg 46863374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 47776266 - 47776403
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| ||||  ||||||  ||||||  |||| | ||||||||  |||| ||||||||  |||||||||||||||||||||||| |||| |||||||    
T  47776266 gagaattgatgttcccacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcgacagttaactgccgagaaattaaaaatctggctg 47776365  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| ||||||||||||||||  |||||||||    
T  47776366 cagttaactgccgaggaaaacctcggtaattaactgcc 47776403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 29593349 - 29593262
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | | ||| |||||||||||| ||||    
T  29593349 atgtttcatcagatgaaacagccacctgctccccctacacactattttcatcatcaacttcatttctaccaccattcaatcccaaaat 29593262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 28980312 - 28980174
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||  |||||||||||||  ||  |||||| |||||||  ||||||| | | || ||    
T  28980312 gagaattgttgttgacacattgcataaggctgagacacacgagtaaaatacgtttttgccccctcagcagttagctgccgaagaattcaatatccggatg 28980213  T
Q  102 cagttaactgtcg-aggaaaacctcggttgttaactgcc 139  Q
    |||||||||| || |||||||||||||| ||||||||||    
T  28980212 cagttaactgccgaaggaaaacctcggtagttaactgcc 28980174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 30355379 - 30355241
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||||||||||||||||| |||| |   |||| | ||||||||  |||| ||||||||  ||| ||||||| ||| ||  ||||||||||  ||||    
T  30355379 agagaattgttgttgacacatttcatatgactgagaaacacgagtaaaatacgcttttgccccctcggcagttaattgctgaagaattcaaaaatcggct 30355280  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  30355279 gcagttaactgccgaggaaaacctcggtagttaactgcc 30355241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 9494942 - 9494810
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  ||| || || |||||  || || | |||||  ||| ||||||||||||||| |||| |||||| ||||||||    
T  9494942 aattgttgttgacacatttcataaggctgaggcacacaagtaaaataggtatatgccccctcggcagttaactgccgaggaattaaaaaaccggctgcag 9494843  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||| |||||||||||||||  ||||||||    
T  9494842 ttaactgccgaggaaaacctcgggagttaactg 9494810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 37340284 - 37340373
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |  ||||||||||||||| |||| ||||||||||| || |||||||||||| |||| ||||||||||| ||||||||||    
T  37340284 tacgtttttgtctcttcgacagttaactgtcgaggaattcaaaaaccggttgcagttaactgccgagaaaaacctcggtagttaactgcc 37340373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 36392059 - 36392182
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||||||||| |||||||   || || || |||||  |||||||||||||  ||||||||||||||  ||| ||||||||||  || ||    
T  36392059 gagaattgttgttgacacattacataaggcttaggcacacaagtaaaatacgtttttgccccctcgacagttaactgttgaggaattcaaaaatcggttg 36392158  T
Q  102 cagttaactgtcgaggaaaacctc 125  Q
    | |||||||| |||||||||||||    
T  36392159 cggttaactgccgaggaaaacctc 36392182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 618762 - 618658
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  || |||||||||| ||||||||| | |||||||||||||||| ||||||||| |||||| ||||| | ||| | ||||||||||||    
T  618762 gttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttccaaccccattcaatccc 618663  T
Q  230 caaat 234  Q
     ||||    
T  618662 aaaat 618658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 19044228 - 19044364
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||| |||||||||||||||||||||  ||| || | ||||||  ||||||||||  || ||| ||||||| ||||||| ||||   |||| | |||    
T  19044228 gagaattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttgttcactcggcagttaattgccgaggaatt-tgaaaccgactg 19044326  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| || |||||||||| ||||| ||||||||||    
T  19044327 cagttaattgccgaggaaaacttcggtagttaactgcc 19044364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 20710408 - 20710272
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||| |||||||||||||||||||||  ||| || | ||||||  ||||||||||  || ||| ||||||| ||||||| ||||   |||| | |||    
T  20710408 gagaattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttgttcactcggcagttaattgccgaggaatt-tgaaaccgactg 20710310  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| || |||||||||| ||||| ||||||||||    
T  20710309 cagttaattgccgaggaaaacttcggtagttaactgcc 20710272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 36186608 - 36186492
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||||||||||||||||||||  | | || ||||||||  |||| ||||||||  ||| ||||||| ||||||| |||||  |||| || |||||    
T  36186608 aattgttgttgacacattgcataaggctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgaggaattc-gaaaccggttgcag 36186510  T
Q  105 ttaactgtcgaggaaaac 122  Q
    ||||||| ||||||||||    
T  36186509 ttaactgccgaggaaaac 36186492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 10705249 - 10705319
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||||||| |||||  ||||||||||||||| |||| ||||||| ||  ||||||||||    
T  10705249 cagttaactgccgagaaattaaaaaatcggctgcagttaactgccgagaaaaaccttgggagttaactgcc 10705319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 21188473 - 21188423
Alignment:
Q  68 acagttaactgccgagaaattcaaaaactggctgcagttaactgtcgagga 118  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  21188473 acagttaactgccgaggaattcaaaaaccggctgcagttaactgccgagga 21188423  T

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Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 42682007 - 42682065
Alignment:
Q  81 gagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||  |||||||||    
T  42682007 gagaaattcaaaaaccagctgcagttaactgccgaggaaaacctcggtaattaactgcc 42682065  T

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Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 46596829 - 46596903
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaa 75  Q
    ||||||||| ||| ||||||||||||||||  ||  || ||||||||  ||||||||||||||||||||||||||    
T  46596829 agagaattgctgtggacacattgcataaggctgacgcacacgagtaaaatacgtttttgcccattcgacagttaa 46596903  T

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Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 46860457 - 46860587
Alignment:
Q  14 tgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtc 113  Q
    ||||||||| |||||||  ||| || || |||||  |||| ||||||||  ||| |||||||||| |||| |||| |||||| | |||||||||||| |     
T  46860457 tgacacattacataaggctgaggcacacaagtaaaatacgcttttgccccctcggcagttaactgtcgaggaattgaaaaaccgactgcagttaactatt 46860556  T
Q  114 gaggaaaacctcggttgttaactgccaaaaa 144  Q
    |||| |||||||||  |||||||||| ||||    
T  46860557 gaggcaaacctcggcagttaactgccgaaaa 46860587  T

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Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 10708269 - 10708189
Alignment:
Q  153 catcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    ||||| |||||||| ||||||||||| |||||| |||| ||||||||||||| |  ||||||| ||||||||| ||||||||    
T  10708269 catcaaatgaaacagccacctgctcctcctacacacta-tttcatcatcaacgtttataccacttccattcaaaccccaaat 10708189  T

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Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 21185553 - 21185662
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||||||||||||||| |  |||||| |  |||||  |||| |||||||   ||| ||||||||||||||  ||||||| ||| |||||    
T  21185553 gagaattgttgttgacacattgcataatgatgagacacataagtaaaatacgattttgcctcctcggcagttaactgccgaagaattcaataaccggctg 21185652  T
Q  102 cagttaactg 111  Q
     |||||||||    
T  21185653 tagttaactg 21185662  T

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Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 34742496 - 34742399
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||||||||||||||| | |  ||| ||||||| || |||| ||||  ||| ||| ||||||||||||| |||||||||||||||  ||||||||    
T  34742496 acgagtaatttacgttttttctccctcggcagttaattgtcgaggaattagaaatctgactgcagttaactgccgaggaaaacctcggaagttaactg 34742399  T

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Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 41049328 - 41049196
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||  ||  || |  |||||  |||| |||||  | ||||  ||||||||| |||  ||||||| ||  ||||    
T  41049328 agagaattgttgttgacacattgcataaggctgatgcacataagtaaaatacgcttttgttc-ttcggtagttaactgtcgaagaattcaataatcggct 41049230  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaa 134  Q
    ||||||||||| |||||||||||||||| |||||    
T  41049229 gcagttaactgccgaggaaaacctcggtagttaa 41049196  T

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Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 9367768 - 9367726
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  9367768 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 9367726  T

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Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 34139869 - 34139947
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgagga 118  Q
    ||||||||||||||||||||||| ||||  | |||||||||||  ||||  ||| | ||||||||||||||| ||||||    
T  34139869 acgagtaatttacgtttttgccccttcggtaattaactgccgaagaattagaaatccggctgcagttaactgccgagga 34139947  T

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Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 43032998 - 43033100
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||  |||||||  ||||||| |||||||||| |   | |||||||||  ||||||||| | |||||||||||||||| |||||    
T  43032998 aaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactat 43033097  T
Q  192 ttt 194  Q
    |||    
T  43033098 ttt 43033100  T

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Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 28112779 - 28112852
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactg 78  Q
    |||||||||||||||||| |||||||| |||||| || |||||  |||| ||||||||  ||| ||||||||||    
T  28112779 aattgttgttgacacatttcataaggttgagacacacaagtaaaatacgcttttgccctctcggcagttaactg 28112852  T

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Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 17840932 - 17840892
Alignment:
Q  99 ctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  17840932 ctgcagttaactgccgaggaaaacctcggtagttaactgcc 17840892  T

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Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 27453679 - 27453615
Alignment:
Q  56 tttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaa 120  Q
    |||||||  ||| ||||||||||||||| |||| |||| | ||||||||||||||| ||||||||    
T  27453679 tttgccccctcggcagttaactgccgaggaattaaaaatccggctgcagttaactgccgaggaaa 27453615  T

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Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 34738391 - 34738435
Alignment:
Q  95 ctggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||| || |||||||||||||||| ||||||||||    
T  34738391 ctggctgcagttaaatgccgaggaaaacctcggtagttaactgcc 34738435  T

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Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 36185842 - 36185955
Alignment:
Q  108 actgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatga-------aacaaccacctgctccccctacatactattttcatcat 200  Q
    |||| |||||||||| ||||| ||||||| || | || |||||||||||||||||       || | ||||||| |||||||||| ||||||| ||||||    
T  36185842 actgccgaggaaaacttcggtagttaactaccgagaattatgtttcatcagatgatagatgaaatagccacctgatccccctacacactattt-catcat 36185940  T
Q  201 caacttcaataccac 215  Q
    ||||||| |||||||    
T  36185941 caacttccataccac 36185955  T

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Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 40587692 - 40587732
Alignment:
Q  99 ctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  40587692 ctgcagttaactgtcgaggaaaacctcagtagttaactgcc 40587732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 48316400 - 48316296
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||| ||||||||| |||||| |||||||  |||||| || |||||  || ||||||||||  | ||||||||||||||||  | ||||| ||| ||||    
T  48316400 agagatttgttgttggcacatttcataaggctgagacacacaagtaaaataagtttttgcccccttgacagttaactgccgaagacttcaataaccggct 48316301  T
Q  101 gcagt 105  Q
    |||||    
T  48316300 gcagt 48316296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 30846871 - 30846812
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacct 124  Q
    |||||||||||||||||| |  || || ||| ||||||||||||||| ||||||||||||    
T  30846871 tcgacagttaactgccgaaattttaaagaaccggctgcagttaactgccgaggaaaacct 30846812  T

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Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 33603197 - 33603260
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaact-ggctgcagttaactgtcgaggaaaacctcgg 127  Q
    |||| ||||||||||||| ||||||||||| | || |||||||||||  |||||||||||||||    
T  33603197 tcgatagttaactgccgacaaattcaaaaaatcggttgcagttaactcccgaggaaaacctcgg 33603260  T

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Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 45767910 - 45767863
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  45767910 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 45767863  T

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Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 11629810 - 11629764
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    |||| ||| |||||||||||||||||||||||||||  |||||||||    
T  11629810 aaaccggcggcagttaactgtcgaggaaaacctcggcagttaactgc 11629764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 15070388 - 15070426
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  15070388 gcagttaactgccgaggaaaacctcggtagttaactgcc 15070426  T

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Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 35606822 - 35606860
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  35606822 gcagttaactgccgaggaaaacctcggtagttaactgcc 35606860  T

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Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 35839324 - 35839374
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttac 52  Q
    |||||||||||||||||||||||||||||| | | || || ||||||||||    
T  35839324 gagaattgttgttgacacattgcataaggttgtgtcacactagtaatttac 35839374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 38555490 - 38555408
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaat 146  Q
    |||| |||||||||||||| |  || || |||  |||||||||||||| |||||||||| ||||  |||||||||| ||||||    
T  38555490 ttcggcagttaactgccgaaattttaaagaaccagctgcagttaactgccgaggaaaacttcggcagttaactgccgaaaaat 38555408  T

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Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 46738736 - 46738858
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  |||||| |||||||| | | || ||||| || | ||||||||||||  ||| ||||||||||||||    ||  ||| | |||||    
T  46738736 gagaattgttgttcccacattacataaggttgtgccacacgagcaaatgacgtttttgccctctcggcagttaactgccgaagttttagaaatccggctg 46738835  T
Q  102 cagttaactgtcgaggaaaacct 124  Q
    |||||||||| |||| |||||||    
T  46738836 cagttaactgccgagaaaaacct 46738858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 10098166 - 10098121
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    |||| ||||||||||||||| |||||||||||||||  ||||||||    
T  10098166 aaaccggctgcagttaactgccgaggaaaacctcgggagttaactg 10098121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 15074277 - 15074232
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||    
T  15074277 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactg 15074232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 21190727 - 21190654
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaa 75  Q
    ||||||||||||||||||||||||||||    ||| | ||||||||  |||||||||||||  ||| |||||||    
T  21190727 gagaattgttgttgacacattgcataagtctaagaaacacgagtaaaatacgtttttgccccctcggcagttaa 21190654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40590631 - 40590546
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaa 86  Q
    ||||||||||||||  ||||||  ||||||  |||| | |||| |||  |||||||||||||  ||| ||||||||||||||||||    
T  40590631 agagaattgttgttcccacatttgataaggctgagaaacacgaataaaatacgtttttgccccctcggcagttaactgccgagaaa 40590546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48829896 - 48829957
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgccc 62  Q
    ||||||||||||||  ||||||  ||||||| | | || |||||||||||||||||||||||    
T  48829896 agagaattgttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgccc 48829957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 618797 - 618745
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaa 121  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||||    
T  618797 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 618745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 20353972 - 20353932
Alignment:
Q  99 ctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||| |||||||||||||| || ||||||||||    
T  20353972 ctgcagttaactatcgaggaaaacctcagtagttaactgcc 20353932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 41047711 - 41047739
Alignment:
Q  1 agagaattgttgttgacacattgcataag 29  Q
    |||||||||||||||||||||||||||||    
T  41047711 agagaattgttgttgacacattgcataag 41047739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 41623954 - 41623894
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgccc 62  Q
    |||||||| |||||||||||| |||||||| ||| || || |||||  |||||||||||||    
T  41623954 gagaattgctgttgacacattacataaggttgaggcacacaagtaaaatacgtttttgccc 41623894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 194
Target Start/End: Original strand, 45763414 - 45763506
Alignment:
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactatttt 194  Q
    |||||||||  |||||||  |||| || |||||||||| |   | |||||||||  ||||||||| | |||||||||||||||| ||||||||    
T  45763414 cagttaactaccgaggaattcctcagtagttaactgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactatttt 45763506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 5295 - 5437
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||||||||||||||  |||||||||||||||| |||||||||| |  || |||||||||||||||||||| ||||||||||||||||||||||||    
T  5295 aaaccggctgcagttaactaccgaggaaaacctcggtagttaactgccgaggaaaatgtttcatcagatgaaacagccacctgctccccctacatactat 5394  T
Q  192 tttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5395 tttcatcatcaacttcaataccacctccattcaatccccaaat 5437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 46973141 - 46973368
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| ||| |||  |||||| || |||||  |||| ||||||||  | | ||||||||||||||| ||||||||||| ||||||||    
T  46973141 aattgttgttgacacatttcattaggctgagacacacaagtaaaatacgattttgcccccttggcagttaactgccgaggaattcaaaaaccggctgcag 46973240  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||||| |||||||||||||  | |||||||||| | || ||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||    
T  46973241 ttaactgccgaggaaaacctc-atagttaactgccgagaattatgtttcatcagatgaaacagccacctgctccccctacacacta-tttcatcatcaac 46973338  T
Q  205 ttcaataccacctccattcaatccccaaat 234  Q
    ||| ||||||| | ||| ||| ||||||||    
T  46973339 ttccataccactttcatacaaaccccaaat 46973368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 9711790 - 9711558
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||||||  ||||||| | | || || |||||  |||| ||||||||  ||  ||||||||||||||| ||||  ||| | ||  |    
T  9711790 gagaattgttgttcccacatttgataaggttgtggcacactagtaaaatacgattttgccccatcagcagttaactgccgaggaattagaaatccggtcg 9711691  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatc 201  Q
    |||||||||| |||||||||||||||  |||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9711690 cagttaactgccgaggaaaacctcgggagttaactgccgaggaatatgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatc 9711591  T
Q  202 aacttcaataccacctccattcaatccccaaat 234  Q
    || |||| | ||||||||||| |||||||||||    
T  9711590 aatttcatttccacctccatttaatccccaaat 9711558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 33 - 234
Target Start/End: Complemental strand, 19499218 - 19499020
Alignment:
Q  33 gagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgtt 132  Q
    |||||| || |||||  |||||||||||||  ||||||||||||||| |||||||| ||||   ||||||||||||||| ||||||||||||| || |||    
T  19499218 gagacacacaagtaaaatacgtttttgccc--tcgacagttaactgctgagaaatttaaaattcggctgcagttaactgccgaggaaaacctcagtcgtt 19499121  T
Q  133 aactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaa 232  Q
    ||||||  | |||||||||||||||||||||| |  ||||||||||||||||| |||| |||||||||||||||| ||||||| |||||  |||||||||    
T  19499120 aactgcagagaaatatgtttcatcagatgaaagagtcacctgctccccctacacacta-tttcatcatcaacttccataccacttccatcaaatccccaa 19499022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 7981206 - 7981047
Alignment:
Q  74 aactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacct 173  Q
    ||||||||||||||| |||||  ||||||| ||||||| |||||||||||||||| |||||| ||| | || |||||||||| |||||||||||||||||    
T  7981206 aactgccgagaaattaaaaaatcggctgcaattaactgccgaggaaaacctcggtagttaaccgccgagaattatgtttcataagatgaaacaaccacct 7981107  T
Q  174 gctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||| |||| |||||||||||||||| ||||||| ||||| ||| ||||||||    
T  7981106 gctccccctacacacta-tttcatcatcaacttccataccacttccatccaaaccccaaat 7981047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 8460236 - 8460026
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||| ||||||||||||  ||||||  ||| || | ||||||| |||||||||| ||  |||  |||||||  ||||| ||||  ||| | ||||    
T  8460236 agagaattgctgttgacacattctataaggctgaggcacatgagtaatatacgtttttgtcccctcggtagttaacaaccgaggaatttgaaatc-ggct 8460138  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||||||||||| | ||||||| |||||| |||||||||| | |||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  8460137 gcagttaactgccaaggaaaatctcggtagttaactgccgagaaatatgtttcatcagatgaaacagccacctgcttcccctacacactattttcatcat 8460038  T
Q  201 caacttcaatac 212  Q
    ||||||||||||    
T  8460037 caacttcaatac 8460026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 13173773 - 13174000
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  ||| || || |||||  |||  ||||||||  ||| ||||||||||| | ||| ||||||||| ||||||||    
T  13173773 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatactattttgccccctcggcagttaactgctgggaa-ttcaaaaaccggctgcag 13173871  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||| | |||||||||||| ||  |||||||||| | || ||||||||||||| ||||||| |||||| |||||||||||||||||||| |||||||||    
T  13173872 ttaacagccgaggaaaaccttggcagttaactgccgagaattatgtttcatcagttgaaacagccacctactccccctacatactatttt-atcatcaac 13173970  T
Q  205 ttcaataccacctccattcaatccccaaat 234  Q
    ||| ||||||| || || ||| ||||||||    
T  13173971 ttccataccacttcaatccaaaccccaaat 13174000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 49924790 - 49924939
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||||| |||| || ||||||||||| |||||||||||| ||||     
T  49924790 gagaattgttgttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccccttcggcaattaactgccgaaaaattcaaaaaccggcta 49924889  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtt 151  Q
    |||||||||| |||||||| | ||||  |||||||||| |||||||||||    
T  49924890 cagttaactgccgaggaaatcatcgggagttaactgccgaaaaatatgtt 49924939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 234
Target Start/End: Original strand, 22345195 - 22345423
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| | ||||||||||  ||||||| | | || |||||||||||||||||||   |  ||| ||||||||||||||| ||||  ||| | |||||    
T  22345195 gagaattgctattgacacattctataaggtcggggcacacgagtaatttacgtttttattccatcggcagttaactgccgaggaatttgaaacc-ggctg 22345293  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatc 201  Q
    |||||||||| |||  ||| ||||||| |||||||||| | |||||||||||||| ||||||||| ||| ||| || ||||||||||||   ||||||||    
T  22345294 cagttaactgccgaaaaaatcctcggtagttaactgccgagaaatatgtttcatcggatgaaacagccatctgttcaccctacatacta---tcatcatc 22345390  T
Q  202 aacttcaataccacctccattcaatccccaaat 234  Q
    |||||| ||||||| ||||||||||||||||||    
T  22345391 aacttccataccacgtccattcaatccccaaat 22345423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 19054294 - 19054162
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttca 196  Q
    ||||||||||||||| | |||||||||||||| |||||||||| | ||||||||||||||| || |||||  ||| ||||||||||||| ||||||||||    
T  19054294 ggctgcagttaactgccaaggaaaacctcggtagttaactgccgagaaatatgtttcatcaaataaaacagtcacgtgctccccctacacactattttca 19054195  T
Q  197 tcatcaacttcaataccacctccattcaatccc 229  Q
    ||||||||||| ||||||| | ||| |||||||    
T  19054194 tcatcaacttccataccactttcatccaatccc 19054162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 36076693 - 36076493
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||| |||||||||||| |||||||  |||| | || |||||  ||||||||  ||| ||||  |||||||  ||||| ||||||||||| ||||||||    
T  36076693 aattgctgttgacacatttcataaggctgagaaacacaagtaaaatacgttttacccc-ttcggtagttaaccaccgaggaattcaaaaaccggctgcag 36076595  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaac 204  Q
    ||||||| |||||||||||||| | || ||||||| | || ||||||||||||||||||||| |||||| |||||| |||  |||| |||||||||||||    
T  36076594 ttaactgccgaggaaaacctcgctagtaaactgccgagaattatgtttcatcagatgaaacagccacctactccccatacgcacta-tttcatcatcaac 36076496  T
Q  205 ttc 207  Q
    |||    
T  36076495 ttc 36076493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 15047283 - 15047448
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||  ||||||| |||||||||| |  || |||||||||| ||||||||| |    
T  15047283 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaattcctcggtagttaactgccgaggaaaatgtttcatccgatgaaacagc 15047382  T
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
     |||||||||||||| | ||||||||| |||||| ||||| | ||||| |||||||||||| ||||    
T  15047383 tacctgctccccctatacactattttcttcatcaccttcatttccacccccattcaatcccaaaat 15047448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 37014953 - 37015057
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| | |||||||| |||||||||    
T  37014953 gttaactgccgaggaatatgtttcatcagatgaaacagccacctgatccccctacatacttttttcatcatcaacttcatttccacctcctttcaatccc 37015052  T
Q  230 caaat 234  Q
    |||||    
T  37015053 caaat 37015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 1654806 - 1654914
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||||| || |||||||||||  ||||||||   |||||||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||||    
T  1654806 gttaactgccaagaattatgtttcatcgtatgaaacagttacctgctccccctacacactattttcatcatcaacttccataccacttccatccaatccc 1654905  T
Q  230 caaattcaa 238  Q
    |||||||||    
T  1654906 caaattcaa 1654914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 11183119 - 11183255
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||  ||||||  |||| ||||||||||  ||||||||||| |  | ||||||||||||| ||| |||| |||| | ||||    
T  11183119 agagaattgttgttgacacatttgataaggctgagaaatacgagtaaaatacgtttttgctcccttgacagttaactgctgaggaattaaaaatccggct 11183218  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  11183219 gcagttaactgccgaggaaaacctcggtagttaactg 11183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 41804169 - 41804037
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||||||||||||  ||||||  ||| || || |||||  |||| |||||||| |||| ||||||||||||||| ||||||||||| | ||||||    
T  41804169 aattgttgttgacacattttataaggctgaggcacacaagtaaaatacgcttttgccccttcggcagttaactgccgaggaattcaaaaaccgactgcag 41804070  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||| |||||||||||||||| ||||||||    
T  41804069 ttaactgccgaggaaaacctcggtagttaactg 41804037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 208
Target Start/End: Complemental strand, 6562233 - 6562096
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||| ||||||| |||||||||| |  || |||||||||||||||||||| |    
T  6562233 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgaggaa-atgtttcatcagatgaaacagc 6562135  T
Q  169 cacctgctccccctacatactattttcatcatcaacttca 208  Q
    ||||||||||| ||| | ||||||||| ||||||||||||    
T  6562134 cacctgctccctcta-acactattttcttcatcaacttca 6562096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 46141716 - 46141858
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||||| |||||||||||  |||  | || |||||  |||| ||||||||  ||| ||||||||||||||| ||||||| ||| |||||    
T  46141716 gagaattgttgttgacatattgcataaggctgaggtacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaattcaataaccggctg 46141815  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    |||||||||| |||||||||| ||||| |||||||||| ||||    
T  46141816 cagttaactgccgaggaaaacatcggtagttaactgccgaaaa 46141858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 50117810 - 50117685
Alignment:
Q  108 actgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttc 207  Q
    |||| ||||||||| |||||| ||||| |||| |  || |||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  50117810 actgccgaggaaaatctcggtagttaaatgccgaggaa-atgttttatcagatgaaacagccacctgctccctctacacactattttcatcatcaacttc 50117712  T
Q  208 aataccacctccattcaatccccaaat 234  Q
    | | |||||||||||||||||| ||||    
T  50117711 atttccacctccattcaatcccaaaat 50117685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 19053996 - 19054101
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  |||| | ||||||||  |||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||    
T  19053996 aattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccccctcgacagttaactgccgaggaattcaaaaaccggctgcag 19054095  T
Q  105 ttaact 110  Q
    ||||||    
T  19054096 ttaact 19054101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 29438159 - 29438010
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||||||  ||||||| | | || |||| ||||||||||||||||||  ||| ||||||||||| || | ||| |||||| |||||    
T  29438159 gagaattgttgttcccacatttgataaggttgtggcacacgaataatttacgtttttgccccctcggcagttaactgcagaaatattaaaaaaccggctg 29438060  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtt 151  Q
    |||||||||  ||||||||||||||||  ||||||||| |||||||||||    
T  29438059 cagttaactaccgaggaaaacctcggtaattaactgccgaaaaatatgtt 29438010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13971997 - 13972122
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||||||||||||||||| |||||||  |||| | || |||||  ||||||||||||| |||| ||||| ||||||||| |||| |||||||||||    
T  13971997 agagaattgttgttgacacatttcataaggctgagaaacacaagtaaaatacgtttttgccccttcggcagtt-actgccgaggaatt-aaaaactggct 13972094  T
Q  101 gcagttaactgtcgaggaaaacctcggt 128  Q
    ||||||||| | ||||||||||||||||    
T  13972095 gcagttaacagccgaggaaaacctcggt 13972122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 23913909 - 23913990
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatcc 228  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| ||||| | |||||||||||||||||    
T  23913909 atgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatcc 23913990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 29356702 - 29356598
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  || |||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||| ||||| | ||||||||||||||||||    
T  29356702 gttaactgccgaggaaaatgtttcatccgatgaaacagccacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatccc 29356603  T
Q  230 caaat 234  Q
     ||||    
T  29356602 aaaat 29356598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 41453874 - 41453978
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  || |||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||| ||||| | ||||||||||||||||||    
T  41453874 gttaactgccgaggaaaatgtttcatccgatgaaacagccacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatccc 41453973  T
Q  230 caaat 234  Q
     ||||    
T  41453974 aaaat 41453978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 73 - 234
Target Start/End: Complemental strand, 21944448 - 21944291
Alignment:
Q  73 taactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacc 172  Q
    |||||| ||||||||| |||||| |||||||||||  || |||||||||||||| | ||||||| || | ||||||||||||||||||||||||   |||    
T  21944448 taactgtcgagaaatttaaaaaccggctgcagttagttgccgaggaaaacctcgatagttaactaccgagaaatatgtttcatcagatgaaacagtaacc 21944349  T
Q  173 tgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    ||   ||| |||| || | |||||||||||||||| ||||||| ||||| |||||| |||||    
T  21944348 tg---cccatacacac-aatttcatcatcaacttccataccacttccatccaatcctcaaat 21944291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 44465649 - 44465736
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||| ||||| | |||||||||||||||||| ||||    
T  44465649 atgtttcatccgatgaaacagccacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaat 44465736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 26633467 - 26633603
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||| ||| || || |||||  |||| ||||||||  |||   ||||||| ||||  ||||||||||| || |||||    
T  26633467 aattgttgttgacacatttcataaggttgaggcacacaagtaaaatacgcttttgccccctcg---gttaactaccgaagaattcaaaaaccggttgcag 26633563  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    ||||||| |||||||||||||||| |||||||||| ||||    
T  26633564 ttaactgccgaggaaaacctcggtagttaactgccgaaaa 26633603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 52802105 - 52802201
Alignment:
Q  43 agtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||||||||  ||| ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||||||||||| ||||||||||    
T  52802105 agtaatttacttttttgccctctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgcc 52802201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 49927652 - 49927517
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||||||||| |||| ||  |||| | ||||||||  |||||||||| ||  ||| ||||||||||||||  |||| |||||| ||||     
T  49927652 gagaattgttgttgacacatttcatatggccgagaaacacgagtaaaatacgtttttgtcccctcggcagttaactgccgaagaatttaaaaaccggcta 49927553  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactg 137  Q
     ||||||||| |||| ||||||||||| ||||||||    
T  49927552 tagttaactgccgagaaaaacctcggtagttaactg 49927517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 5077993 - 5078054
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  5077993 atgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttca 5078054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 4516067 - 4516170
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| | || ||||||| || |||||||||| |||||||||||||||||| |||| |||||||||||||||| ||||||| | ||| ||| |||    
T  4516067 gttaactgccgagaattatgttttattagatgaaacagccacctgctccccctacacacta-tttcatcatcaacttcgataccactttcatccaaaccc 4516165  T
Q  230 caaat 234  Q
    |||||    
T  4516166 caaat 4516170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 23276247 - 23276111
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||| || ||||  ||||||  |||| | ||||||||  |||||||||||||  ||| ||||||||||| ||| |||| |||| | ||||     
T  23276247 gagaattgttgttcacgcatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgctgaggaattaaaaatccggcta 23276148  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    |||||||||| |||||||||||||| | |||||||||    
T  23276147 cagttaactgccgaggaaaacctcgatagttaactgc 23276111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 44621114 - 44621051
Alignment:
Q  145 atatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||    
T  44621114 atatgtttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttca 44621051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 3941222 - 3941152
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||| |||||||||||||||||||  |||||||||| ||||| ||||||||||    
T  3941222 cagttaactgccgaggaattcataaactggctgcagttaactaccgaggaaaacttcggtagttaactgcc 3941152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 6437678 - 6437536
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||||||||||||||||| |  ||| || || |||||  |||| ||||||||  ||| ||||||||||||||| || |||| ||  | |||    
T  6437678 gagaattgttgttgacacattgcataaagctgaggcacacaagtaaaatacgcttttgccctctcggcagttaactgccgaggaagtcaataatcgactg 6437579  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    |||||||||  | |||||||||||||| |||| ||||| ||||    
T  6437578 cagttaactaccaaggaaaacctcggtagttatctgccgaaaa 6437536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 18975259 - 18975117
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||| |||| |  |||  | || |||||  |||||||||||||  ||| | |||||||| |||| |||| || |||||| ||    
T  18975259 gagaattgttgttgacacattgtataaagctgaggtacacaagtaaaatacgtttttgccccctcggcggttaactgtcgaggaatttaataactggttg 18975160  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    ||||||||||  ||||||||| ||||| |||||||||| ||||    
T  18975159 cagttaactgcagaggaaaacttcggtagttaactgccgaaaa 18975117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 1656220 - 1656091
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||| |||| | ||||||||  || |||||||||| | ||||||    ||||  || ||||||||||  | ||||||    
T  1656220 aattgttgttgacacatttcataaggttgagaaacacgagtaaaatatgtttttgcccct-cgacag----ctgcttaggaattcaaaaatcgcctgcag 1656126  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||| ||||||||||| ||||||||||    
T  1656125 ttaactgtcgagaaaaacctcggtagttaactgcc 1656091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 36072377 - 36072446
Alignment:
Q  76 ctgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaa 145  Q
    ||||||||||||| |||||  ||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  36072377 ctgccgagaaattgaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaactgccgaaaaa 36072446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 13629468 - 13629531
Alignment:
Q  145 atatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||| ||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||    
T  13629468 atatatttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttca 13629531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 22397870 - 22397933
Alignment:
Q  145 atatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||||||||    
T  22397870 atatgtttcatcagatgaaatagccacctgctccccctacactctattttcttcatcaacttca 22397933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 31945910 - 31945808
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||  |||||||  ||||||| |||||||||| |  || |||||||||| ||||||||| | |||||||||||||||| |||||    
T  31945910 aaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctacacactat 31945811  T
Q  192 ttt 194  Q
    |||    
T  31945810 ttt 31945808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 30905823 - 30905883
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 208  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||    
T  30905823 atgtttcatcagatgaaacagccacctgc-ccccctacacactattttcttcatcaacttca 30905883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 13178233 - 13178134
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||  ||||||||||| |  ||| ||||||||||| |||||||| ||||||  ||||||||||||||  |||||||||||||   ||||||||||    
T  13178233 acgagtaaaatacgtttttgctccctcggcagttaactgctgagaaatttaaaaaccagctgcagttaactgctgaggaaaacctcgagagttaactgcc 13178134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 35258997 - 35258874
Alignment:
Q  16 acacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcga 115  Q
    ||||||| |||||||  |||||| || |||||  |||||   ||| |||||| ||||||||||||||| |||| |||| | |||||||||||||   |||    
T  35258997 acacatttcataaggctgagacacacaagtaaaatacgtaaatgctcattcggcagttaactgccgaggaattaaaaatccggctgcagttaacacccga 35258898  T
Q  116 ggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| | ||||||||||    
T  35258897 ggaaaacctcgatggttaactgcc 35258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 25040162 - 25040080
Alignment:
Q  55 ttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||| || |||| |||||||||| |||||||||  ||||| |||| ||||||| ||||||||||||||| ||| ||||||||    
T  25040162 ttttgtcccttcggcagttaactgtcgagaaattttaaaaccggcttcagttaattgtcgaggaaaaccttggtagttaactg 25040080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 44470083 - 44470013
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||||||||||  ||||||||||    
T  44470083 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgcc 44470013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 48751477 - 48751412
Alignment:
Q  74 aactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||| |||| |||| | |||||||||||| || |||||||||||||||| ||||||||||    
T  48751477 aactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaacctcggtagttaactgcc 48751412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 51271730 - 51271593
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  || ||| |||||||| | | || ||| |||| | ||||||||||||  ||| ||||||||||||||    ||  ||| | |||||    
T  51271730 gagaattgttgttcccaaattacataaggttgtgccacacgggtaaatgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctg 51271631  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| || |||||||||||||||| ||||||||||    
T  51271630 cagttaattgccgaggaaaacctcggtggttaactgcc 51271593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 13636200 - 13636124
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaa-ctggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||||||| |  || ||||| | ||||||||||||||| |||||||||||||||| ||||||||||    
T  13636200 ttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgcc 13636124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 4516032 - 4516079
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgag 116  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  4516032 cagttaactgccgaggaattcaaaaaccggctgcagttaactgccgag 4516079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 27484993 - 27485112
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| ||||  ||||||  ||||||  |||| | ||||||||  |||||||||||||  ||| |||||||||||| || |||| |||| | |||||    
T  27484993 gagaattgctgttcccacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgcctaggaattaaaaatccggctg 27485092  T
Q  102 cagttaactgtcgaggaaaa 121  Q
    |||||||||| |||| ||||    
T  27485093 cagttaactgccgagaaaaa 27485112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 35521551 - 35521654
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||||||||||||||||  ||||||  ||| || || |||||  |||| ||||||||  ||| ||||||||||||||| || | |||||| ||||||||    
T  35521551 aattgttgttgacacattttataaggctgaggcacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaaataaaaaaccggctgcag 35521650  T
Q  105 ttaa 108  Q
    ||||    
T  35521651 ttaa 35521654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 49874941 - 49874992
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttac 52  Q
    ||||||||||||||||||||||||||||||| | | || |||||||||||||    
T  49874941 agagaattgttgttgacacattgcataaggttgtgtcacacgagtaatttac 49874992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 3983111 - 3983213
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||  |||||||  ||||||| |||||||||| |   | |||||||||  ||||||||| | |||||||||||||||| |||||    
T  3983111 aaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactat 3983210  T
Q  192 ttt 194  Q
    |||    
T  3983211 ttt 3983213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 6557916 - 6557986
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| ||||  |||   ||||||||||||||| ||||||||| |||||| ||||||||||    
T  6557916 cagttaactgccgaggaatttgaaattcggctgcagttaactgccgaggaaaatctcggtagttaactgcc 6557986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 38689869 - 38690002
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||||||||| |  | | || | ||||||  |||| |||| |||  |||  |||||| || |||| ||||| ||| | ||||||||    
T  38689869 aattgttgttgacacattgcataaagctgtgtcacatgagtaaaatacgcttttaccccctcggtagttaaatgtcgaggaattcgaaacc-ggctgcag 38689967  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| | |||||||||||||| ||||||||||    
T  38689968 ttaactgccaaggaaaacctcggtagttaactgcc 38690002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 44336278 - 44336320
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  44336278 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 44336320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 51337585 - 51337539
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcga 115  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||    
T  51337585 cagttaactgccgaggaattaaaaaaccggctgcagttaactgtcga 51337539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 51666774 - 51666658
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||| |||||||||||||||||| |  | | || ||||||||  |||| ||||||||  ||| ||||||| ||||||| ||||| ||| | ||||||||    
T  51666774 aattgatgttgacacattgcataaagctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgagtaattcgaaatc-ggctgcag 51666676  T
Q  105 ttaactgtcgaggaaaac 122  Q
    |||||||  |||||||||    
T  51666675 ttaactgctgaggaaaac 51666658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 19159618 - 19159694
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaa-ctggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||||||| |  || ||||| | ||||||||||||||| | |||||||||||||| ||||||||||    
T  19159618 ttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccaaggaaaacctcggtagttaactgcc 19159694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 20349493 - 20349557
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactatttt 194  Q
    |||||||||| |  || |||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  20349493 gttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctacacactatttt 20349557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 23359435 - 23359351
Alignment:
Q  55 ttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||  ||| ||||||| ||||||| ||||  ||| | ||||||||||||||  |||||||||||||||| || |||||||    
T  23359435 ttttgccccctcggcagttaattgccgaggaatttgaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgcc 23359351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 26879335 - 26879295
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  26879335 gcagttaactgccgaggaaaacctcggtagttaactgccaa 26879295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 36908515 - 36908627
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||| ||||||||||||  ||||||  ||| || || |||||  ||| ||||||||   ||| |||||||||| |||  ||||||||||| ||||||||    
T  36908515 aattgatgttgacacattttataaggatgaggcacacaagtaaaatacatttttgcctcctcggcagttaactgtcgaagaattcaaaaaccggctgcag 36908614  T
Q  105 ttaactgtcgagg 117  Q
    ||||||| |||||    
T  36908615 ttaactgccgagg 36908627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 3943998 - 3944045
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  3943998 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 3944045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 3993892 - 3993845
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  3993892 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 3993845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 8548718 - 8548671
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  8548718 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 8548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 15051397 - 15051350
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  15051397 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 15051350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1872041 - 1872087
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaa 47  Q
    ||||||||||||||||||||||||||||||  ||| || ||||||||    
T  1872041 agagaattgttgttgacacattgcataaggctgaggcacacgagtaa 1872087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 3728768 - 3728806
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  3728768 gcagttaactgccgaggaaaacctcggtagttaactgcc 3728806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 9618656 - 9618706
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttac 52  Q
    |||||||||||||||||||||||||||||  | | || |||||||||||||    
T  9618656 gagaattgttgttgacacattgcataaggctgtgtcacacgagtaatttac 9618706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 19161921 - 19161963
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  19161921 ggctgcagttaactgccgaggaaaacctcgggagttaactgcc 19161963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23272782 - 23272892
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||||||||| | |||||  ||||||  |||| ||||||||||  |||||||||  ||  ||| ||||||||||||||| |||| || | |  |||    
T  23272782 agagaattgttgttcatacatttgataaggatgagaaatacgagtaaaatacgtttttttcccctcgccagttaactgccgaggaattaaatatccagct 23272881  T
Q  101 gcagttaactg 111  Q
    |||||||||||    
T  23272882 gcagttaactg 23272892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 38119660 - 38119614
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    ||||| || ||||||||||| |||||||||||||||| |||||||||    
T  38119660 aaactagcggcagttaactgccgaggaaaacctcggtagttaactgc 38119614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 38776175 - 38776073
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| |||| |||||  |||||||  ||||||| |||||||||| |   | |||||||||  ||||||||| | |||||||||||||||| |||||    
T  38776175 aaaccggcggcagataactaccgaggaattcctcggtagttaactgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactat 38776076  T
Q  192 ttt 194  Q
    |||    
T  38776075 ttt 38776073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 46216427 - 46216469
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||    
T  46216427 ggctgcagttaactatcgaggaaaacttcggtagttaactgcc 46216469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 50617234 - 50617276
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||| |||||||||||||  ||||||||||    
T  50617234 ggctgcagttaactgtcaaggaaaacctcgggagttaactgcc 50617276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 51290032 - 51289962
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||| | ||| |||| |||| | || |||||||||||| |||||||||||||||| |||| |||||    
T  51290032 cagttaactactgaggaattaaaaatccggttgcagttaactgccgaggaaaacctcggtagttagctgcc 51289962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 19495063 - 19495120
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaac 122  Q
    |||||||||||||  | |||||||||||| | ||||||||||||||| |||| |||||    
T  19495063 tcgacagttaactatcaagaaattcaaaatccggctgcagttaactgccgagaaaaac 19495120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 27115895 - 27115842
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaac 122  Q
    ||||||| ||||||| |||| |||||| ||||||||||||||| ||| ||||||    
T  27115895 cagttaattgccgaggaatttaaaaaccggctgcagttaactgccgaagaaaac 27115842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 29424402 - 29424451
Alignment:
Q  90 aaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||| ||||||||||||||  |||||||||| ||||| ||||||||||    
T  29424402 aaaaaccggctgcagttaactaccgaggaaaacttcggtagttaactgcc 29424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 35527141 - 35527036
Alignment:
Q  13 ttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgt 112  Q
    |||||||||| |||||||  ||| || || |||||  ||||||||||||   | | ||||||| ||||||  || |||||||| ||||||||||||||||    
T  35527141 ttgacacatttcataaggctgaggcacacaagtaaaatacgtttttgccttcttggcagttaattgccgaagaaatcaaaaacaggctgcagttaactgt 35527042  T
Q  113 cgagga 118  Q
     |||||    
T  35527041 agagga 35527036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 46886526 - 46886390
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||||||||| |||||||  ||||||| | |  | |||||||| | ||||||||||||  ||| ||||||||||||||    ||  ||| | |||||    
T  46886526 gagaattgttgtttacacatttgataaggttgtgctacacgagtaaatgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctg 46886427  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
     |||||| || ||||||||| |||||| ||||||||||    
T  46886426 tagttaagtgccgaggaaaa-ctcggtagttaactgcc 46886390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 640987 - 641015
Alignment:
Q  2 gagaattgttgttgacacattgcataagg 30  Q
    |||||||||||||||||||||||||||||    
T  640987 gagaattgttgttgacacattgcataagg 641015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 13633904 - 13633940
Alignment:
Q  103 agttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  13633904 agttaactgccgaggaaaacctcggtagttaactgcc 13633940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 30905772 - 30905820
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgagg 117  Q
    ||||||||||||||||||||  ||| | ||||||||||||||| |||||    
T  30905772 cagttaactgccgagaaatttgaaatccggctgcagttaactgccgagg 30905820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 41459287 - 41459215
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||||||||||||||| ||    |||||  |||||||||||||  |||||||||||||||  ||||||||    
T  41459287 tcgacagttaactgccgaggaaaaataaaaccagctgcagttaactaccgaggaaaacctcggcagttaactg 41459215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 50117886 - 50117811
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctc 177  Q
    ||||||||||| ||||||||| |||||| ||||| |||| |  || |||||| ||||||||||||| ||| ||||||    
T  50117886 gcagttaactgccgaggaaaatctcggtagttaaatgccgaggaa-atgttttatcagatgaaacagccatctgctc 50117811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 51288859 - 51288939
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaa 120  Q
    |||| ||||||| ||||||||||  ||| ||||||||| ||||| ||||  ||| | |||||||||||||||  |||||||    
T  51288859 acgaataatttatgtttttgccccctcggcagttaactaccgaggaattagaaatccggctgcagttaactgcggaggaaa 51288939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 51291724 - 51291696
Alignment:
Q  1 agagaattgttgttgacacattgcataag 29  Q
    |||||||||||||||||||||||||||||    
T  51291724 agagaattgttgttgacacattgcataag 51291696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 1319 - 1088
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| || |||||||||||||||||  ||| || |||||||||||||||||||| ||  ||| ||||||||||||||| ||||  ||| | ||| |    
T  1319 gagaattgctgctgacacattgcataaggctgaggcacacgagtaatttacgtttttgtcccctcggcagttaactgccgaggaatttgaaacc-ggcag 1221  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatc 201  Q
    || ||||||| |||||||||||||||  |||||||||| |  ||||||||||||||||||||| | |||| |||||||||   |||||||||||||||||    
T  1220 caattaactgccgaggaaaacctcggaagttaactgccgaggaatatgtttcatcagatgaaatagccacatgctcccccataatactattttcatcatc 1121  T
Q  202 aacttcaataccacctccattcaatccccaaat 234  Q
    ||||||| | |||||||||||||||||| ||||    
T  1120 aacttcatttccacctccattcaatccctaaat 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 2 - 234
Target Start/End: Original strand, 18605979 - 18606210
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||||||||||| || |||  ||| || ||||||||  |||||||||||||  |||  ||||||||||| || ||||  | | | |||||    
T  18605979 gagaattgttgttgacacattgtatgaggctgaggcacacgagtaaaatacgtttttgccccctcggtagttaactgcctaggaatttgacacc-ggctg 18606077  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatc 201  Q
    |||||||||| ||||||||||||||||  ||||||||| | |||||| ||| |||||||||||||  ||||||||||||||||| |||||||||||||||    
T  18606078 cagttaactgccgaggaaaacctcggtacttaactgccgagaaatatattttatcagatgaaacagtcacctgctccccctacacactattttcatcatc 18606177  T
Q  202 aacttcaataccacctccattcaatccccaaat 234  Q
    |||||| ||||||| ||||| ||||||||||||    
T  18606178 aacttccataccacttccatccaatccccaaat 18606210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 13388779 - 13388615
Alignment:
Q  70 agttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaacc 169  Q
    |||||||||||||||||||  |||   |||||||||||||||||||||||||||||||| |||||||||| |  || |||||||||| |||||||||||     
T  13388779 agttaactgccgagaaatttcaaattcggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaaatgtttcatccgatgaaacaact 13388680  T
Q  170 acctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    |||||||||||||||| ||||||||| |||||| ||||| | |||||||||||||||||| ||||    
T  13388679 acctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaat 13388615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 7363314 - 7363220
Alignment:
Q  144 aatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaa 238  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7363314 aatatgtttcatcagatgaaacagtcatctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaa 7363220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 31146374 - 31146538
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||| ||||  ||| | |||||||||||||||||||||||||| ||||| |||||||||| |  ||||||||||||| ||||||||| |    
T  31146374 cagttaactgccgaggaatttgaaatccggctgcagttaactgtcgaggaaaacatcggtagttaactgccgaggaatatgtttcatctgatgaaacagc 31146473  T
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    || |||||||||||||| |||| ||||||||||||||||| |  | |  |||||||||||||||||    
T  31146474 catctgctccccctacacacta-tttcatcatcaacttcattttccctaccattcaatccccaaat 31146538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 2052610 - 2052525
Alignment:
Q  158 gatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaagtttt 243  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  2052610 gatgaaacagctacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaatccaattttt 2052525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 215
Target Start/End: Original strand, 16192751 - 16192915
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatg 149  Q
    |||||||||||||  ||| |||||||||| |||| |||| |||||  |||||||||||| ||||||||||| ||||||  |||||||||| | || ||||    
T  16192751 tacgtttttgccccctcggcagttaactgtcgagtaatttaaaaatcggctgcagttaagtgtcgaggaaagcctcggcagttaactgccgagaattatg 16192850  T
Q  150 tttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccac 215  Q
    ||||||||| ||||||| |||| || || ||||||| |||| |||||||||||||||| |||||||    
T  16192851 tttcatcagctgaaacagccacatgttctccctacacacta-tttcatcatcaacttccataccac 16192915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 28249918 - 28250051
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||||||||||| |||||||||||||||| |||||||||| |  || |||||||||  ||||||||| | |||||||||||||||| ||||||||| ||||    
T  28249918 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaatgtttcatttgatgaaacagctacctgctccccctacacactattttcttcat 28250017  T
Q  201 caacttcaataccacctccattcaatccccaaat 234  Q
    || ||||| | |||| ||||||||||||| ||||    
T  28250018 caccttcatttccacttccattcaatcccaaaat 28250051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 238
Target Start/End: Original strand, 24218020 - 24218187
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    |||||||||||||||||||||||||||||| || |||||| |   |||     ||||||| |||||||  ||| ||| ||||||||||||||||||||||    
T  24218020 cagttaactgccgagaaattcaaaaactggttgtagttaaatactgagattttcctcggtagttaactatcaagaaaaatgtttcatcagatgaaacaac 24218119  T
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaa 238  Q
    ||||||| ||| ||||| |||| |||||||||||||||| |||||||  ||||  |||||||||||||||    
T  24218120 cacctgc-ccctctacacacta-tttcatcatcaacttccataccactcccatctaatccccaaattcaa 24218187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 29286162 - 29286283
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||  |||  |||||||||||||| || | | |||| || |    
T  29286162 agagaattgttgttgacacattgcataaggttgaggcacacaagtaatttacgtttttgccccctcggtagttaactgccgaggaaataagaaaccggtt 29286261  T
Q  101 gcagttaactgtcgaggaaaac 122  Q
    ||||||||||| ||||||||||    
T  29286262 gcagttaactgccgaggaaaac 29286283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 7361125 - 7361258
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| ||||||||||||||||||||  | | || |||||||||||||||||||| ||  ||| || |||||||| ||| | || |||||| |||||    
T  7361125 gagaattgctgttgacacattgcataaggctgtggcacacgagtaatttacgtttttgtcccgtcggcaattaactgctgaggattttaaaaaccggctg 7361224  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaac 135  Q
    |||||||||| |||||||| ||||||| ||||||    
T  7361225 cagttaactgccgaggaaatcctcggtagttaac 7361258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 25141219 - 25141098
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||||||||||||||||||||||||  ||| || |||| |||||||  |||||| ||||||| |||||||||| |||| |||||||| ||  |||    
T  25141219 agagaattgttgttgacacattgcataaggctgaggcacacgaataatttatatttttgtccattcggcagttaactgtcgaggaattcaaataccagct 25141120  T
Q  101 gcagttaactgtcgaggaaaac 122  Q
     |||||||||| ||||||||||    
T  25141119 acagttaactgccgaggaaaac 25141098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 26701853 - 26701983
Alignment:
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatc 201  Q
    ||||||||| ||||||||||||||| | |||||||||| |||| |||||||||||||||||||||  |||||||| |||||||| | || ||||||||||    
T  26701853 cagttaactctcgaggaaaacctcgttagttaactgccgaaaattatgtttcatcagatgaaacagtcacctgct-cccctacacaata-tttcatcatc 26701950  T
Q  202 aacttcaataccacctccattcaatccccaaat 234  Q
    |||||  ||||||| | ||| ||| ||||||||    
T  26701951 aactttcataccactttcatccaaaccccaaat 26701983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 31768725 - 31768824
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||| |||||||||  ||| ||||||||||||||| |||| |||| | |||||||||||| || |||||||||||||||| ||||||||||    
T  31768725 acgagtaatttacttttttgccccctcggcagttaactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaacctcggtagttaactgcc 31768824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 7361262 - 7361320
Alignment:
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatc 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7361262 cacctgctccccctacatactattttcatcatcaacttcaataccaccttcattcaatc 7361320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 23958827 - 23958961
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||   ||||||  ||||||  | | |||  |||||||||| ||  ||| ||||||||||||||||||||| ||||| ||||||||    
T  23958827 aattgttgttgacacatatgataaggctgagacacccaactaaaatacgtttttgtcccctcggcagttaactgccgagaaattccaaaaccggctgcag 23958926  T
Q  105 ttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| || |||||||||||||||| ||||||||||    
T  23958927 ttaaatgccgaggaaaacctcggtagttaactgcc 23958961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 23986018 - 23985915
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||||  ||||||||||||||||||||||||  ||||||||||||||||| || | |||||||||||||||| || |||| | ||| |||||||    
T  23986018 gttaactgccatgaaatatgtttcatcagatgaaacagtcacctgctccccctacacacca-tttcatcatcaacttccattccactttcatccaatccc 23985920  T
Q  230 caaat 234  Q
    |||||    
T  23985919 caaat 23985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 32643593 - 32643521
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    |||||||||||| || |||| |||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  32643593 cagttaactgccaaggaattaaaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgccaa 32643521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 11840390 - 11840252
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaact-ggc 99  Q
    ||||||||||||||  ||||||||||||||  | |||| |||||||||| | ||||||||||  | |  ||||||||||||| |  || | ||| | |||    
T  11840390 agagaattgttgttcccacattgcataaggctgtgacacacgagtaattgatgtttttgcccccttggtagttaactgccga-agttttagaaattcggc 11840292  T
Q  100 tgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  11840291 tgcagttaactgtcgaggaaaacctcggtagttaactgcc 11840252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2050962 - 2051098
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||| | ||||||||||||||||||  ||  || ||||||||  ||||||||||| | |||| ||||||||||||||  ||||   |||| || |    
T  2050962 agagaattgctattgacacattgcataaggctgatgcacacgagtaaaatacgtttttgctccttcggcagttaactgccgatgaatt-tgaaaccggtt 2051060  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    ||||||||||| |||||||||||||||| |||| ||||    
T  2051061 gcagttaactgccgaggaaaacctcggtagttatctgc 2051098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 12784048 - 12783959
Alignment:
Q  50 tacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||||||||  ||| ||||||||||||||  ||||||| ||| ||||||||||| ||||||||||||||||| || ||||||||||    
T  12784048 tacgcttttgccccatcggcagttaactgccgatgaattcaataaccggctgcagttagctgtcgaggaaaacctcagtagttaactgcc 12783959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 13404770 - 13404629
Alignment:
Q  3 agaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgc 102  Q
    |||||||||||| |||||||||||||||  ||| || || |||||  ||||  |||||||  |||  ||||||||| |||| ||||||| |||  |||||    
T  13404770 agaattgttgttaacacattgcataaggccgaggcacacaagtaaaatacgcgtttgccccctcggtagttaactgtcgaggaattcaataacctgctgc 13404671  T
Q  103 agttaactgtcgaggaaaacctcggttgttaactgccaaaaa 144  Q
    ||||||||| || ||||||||| ||| |||||||||| ||||    
T  13404670 agttaactgccgtggaaaaccttggtagttaactgccgaaaa 13404629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 29076462 - 29076325
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||| ||||||||||  | | || || ||||||| |||||||||||| |||| |||||||||| |||    ||  ||| | |||||    
T  29076462 gagaattgttgttcccacgttgcataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctg 29076363  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||  ||||||||||||||| ||||||||||    
T  29076362 cagttaactgctgaggaaaacctcggtagttaactgcc 29076325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 29109995 - 29109858
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||| ||||||||||  | | || || ||||||| |||||||||||| |||| |||||||||| |||    ||  ||| | |||||    
T  29109995 gagaattgttgttcccacgttgcataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctg 29109896  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||  ||||||||||||||| ||||||||||    
T  29109895 cagttaactgctgaggaaaacctcggtagttaactgcc 29109858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 29111435 - 29111298
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||| ||||||||||  | | || || ||||||| |||||||||||| |||| |||||||||| |||    ||  ||| | |||||    
T  29111435 gagaattgttgttcccacgttgcataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctg 29111336  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||  ||||||||||||||| ||||||||||    
T  29111335 cagttaactgctgaggaaaacctcggtagttaactgcc 29111298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 18347077 - 18347181
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  || ||||||||||  |||||||| | |||||||||||||||| ||||||||| |||||| ||||| | ||| | ||||||||||||    
T  18347077 gttaactgccgaggaaaatgtttcatccaatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttccaaccccattcaatccc 18347176  T
Q  230 caaat 234  Q
     ||||    
T  18347177 aaaat 18347181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 23986098 - 23986011
Alignment:
Q  24 cataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactg 111  Q
    |||||||  |||||| || |||||  |||||||||||||  | | ||||||||||||||||||||||||||| || ||||||||||||    
T  23986098 cataaggctgagacacacaagtaaaatacgtttttgcccccttggcagttaactgccgagaaattcaaaaaccggttgcagttaactg 23986011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 2260347 - 2260254
Alignment:
Q  140 aaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    ||||||||| |||  ||| |||||||||| |||||||||||||| |  |||||| ||||||||||||| ||| ||| ||||| ||||||||||||    
T  2260347 aaaaaatattttttttcatatgaaacaacaacctgctccccctatacgctattt-catcatcaacttccataacacttccatccaatccccaaat 2260254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 7537170 - 7537240
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaact 110  Q
    |||||||||||||||||||||||  ||| ||||||| || |||| |||| |||||| ||||||||||||||    
T  7537170 acgagtaatttacgtttttgccccctcggcagttaattgtcgaggaattaaaaaaccggctgcagttaact 7537240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 2258309 - 2258366
Alignment:
Q  65 tcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaac 122  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  2258309 tcgatagtcaactgccgaaaaattcaaaaactggctgcagttaactatcgagaaaaac 2258366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 28362803 - 28362734
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||||||||| | |||||||||    
T  28362803 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgc 28362734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 2052721 - 2052615
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||| ||||||| ||||| || || || |||||||||||||||||||| ||  ||| |||||||||| |||| ||||  ||| | |||||    
T  2052721 gagaattgttgttggcacattgtataagctg-aggcacacgagtaatttacgtttttgtcccctcggcagttaactgtcgaggaatttgaaatc-ggctg 2052624  T
Q  102 cagttaact 110  Q
    |||||||||    
T  2052623 cagttaact 2052615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 22305103 - 22305179
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaa-ctggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||||||| |  || ||||| | ||||||||||||||| |||||||||||||||| ||||||||||    
T  22305103 ttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgcc 22305179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 29065674 - 29065782
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||||||  ||||||  | | || ||||||||||||| |||||||||  ||| ||||||||||||||| ||||  ||| | |||||    
T  29065674 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29065773  T
Q  102 cagttaact 110  Q
    |||||||||    
T  29065774 cagttaact 29065782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 29074687 - 29074795
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||||||  ||||||  | | || ||||||||||||| |||||||||  ||| ||||||||||||||| ||||  ||| | |||||    
T  29074687 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29074786  T
Q  102 cagttaact 110  Q
    |||||||||    
T  29074787 cagttaact 29074795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 29079451 - 29079559
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||||||  ||||||  | | || ||||||||||||| |||||||||  ||| ||||||||||||||| ||||  ||| | |||||    
T  29079451 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29079550  T
Q  102 cagttaact 110  Q
    |||||||||    
T  29079551 cagttaact 29079559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 29107260 - 29107368
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||||||  ||||||  | | || ||||||||||||| |||||||||  ||| ||||||||||||||| ||||  ||| | |||||    
T  29107260 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29107359  T
Q  102 cagttaact 110  Q
    |||||||||    
T  29107360 cagttaact 29107368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 35021402 - 35021282
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    ||||||| |||||||||||||  ||| ||  |||| | ||||||||  |||  ||||||||  ||| ||||||| ||| ||  ||||||||||| |||||    
T  35021402 gagaattattgttgacacattttatatggctgagaaacacgagtaaaatacacttttgccccctcggcagttaaatgcggaagaattcaaaaaccggctg 35021303  T
Q  102 cagttaactgtcgaggaaaac 122  Q
    |||||||||| ||||||||||    
T  35021302 cagttaactgccgaggaaaac 35021282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 24088844 - 24088790
Alignment:
Q  82 agaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    |||||||||||||| |||| |||||||||||||||||||| |||||| ||||||||    
T  24088844 agaaattcaaaaac-ggctacagttaactgtcgaggaaaatctcggtagttaactg 24088790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 6204856 - 6204898
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  6204856 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 6204898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 11691823 - 11691865
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  11691823 ggctgcagttaactgccgaggaaaacctcggtagttaactgcc 11691865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 13479663 - 13479769
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    |||||||||||||||||| |||||||  ||| || || |||||  |||| ||||||||  |||  ||||||||| || | |||||||||||  |||||||    
T  13479663 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgccccctcggtagttaactgtcggggaattcaaaaaccagctgcag 13479762  T
Q  105 ttaactg 111  Q
    |||||||    
T  13479763 ttaactg 13479769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 34231616 - 34231559
Alignment:
Q  148 tgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaactt 206  Q
    |||||||| ||||||||||||||||||||||||||||  | || |||||||||||||||    
T  34231616 tgtttcattagatgaaacaaccacctgctccccctactcatta-tttcatcatcaactt 34231559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 13401420 - 13401529
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| ||||||||||||  ||||||| |||  | |||||| |  || | ||||||||  ||| ||||||||||||||| |||| |||||  |||||    
T  13401420 gagaattgatgttgacacattttataaggttgagtaacacgagttaaatatgcttttgccccctcggcagttaactgccgaggaattaaaaaatcggctg 13401519  T
Q  102 cagttaactg 111  Q
    ||||||||||    
T  13401520 cagttaactg 13401529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 13479790 - 13479854
Alignment:
Q  155 tcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctcca 220  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||| |||  ||||||| ||||    
T  13479790 tcagatgaaacagccacctgctccccctacacacta-tttcatcatcagctttcataccacttcca 13479854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 29061230 - 29061338
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| ||||  |||||| |||||||  | | || ||||||||||||| |||||||||  ||| ||||||||||||||| ||||  |||   |||||    
T  29061230 gagaattggtgttcccacattacataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaattcggctg 29061329  T
Q  102 cagttaact 110  Q
    |||||||||    
T  29061330 cagttaact 29061338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 1612785 - 1612694
Alignment:
Q  103 agttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactatttt 194  Q
    ||||||||  |||||||  ||||||| |||||||||| |   | |||||||||  ||||||||| | |||||||||||||||| ||||||||    
T  1612785 agttaactaccgaggaattcctcggtagttaactgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactatttt 1612694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 9049161 - 9049086
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||||||    |  |||||| ||||||||||||||  |||||||||| ||||| ||||||||||    
T  9049161 ttcgacagttaactgccgaagtttgaaaaaaccggctgcagttaactaccgaggaaaacttcggtagttaactgcc 9049086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 13382653 - 13382700
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  13382653 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 13382700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 8193281 - 8193211
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||| ||||   ||||||||||||||| |||||||||| |||   ||||||||||    
T  8193281 cagttaactgccgaggaattaaaaacacggctgcagttaactgccgaggaaaacttcgacagttaactgcc 8193211  T

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Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 18351683 - 18351645
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  18351683 gcagttaactgccgaggaaaacctcggtagttaactgcc 18351645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 26712081 - 26712119
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  26712081 gcagttaactgccgaggaaaacctcggtagttaactgcc 26712119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 9048097 - 9048146
Alignment:
Q  90 aaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||| ||||||||||||||  |||||||||| ||||| ||||||||||    
T  9048097 aaaaaccggctgcagttaactaccgaggaaaacttcggtagttaactgcc 9048146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 30258358 - 30258317
Alignment:
Q  98 gctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||||||||||| |||||  ||||||||||    
T  30258358 gctgcagttaactgtcgaggaaaatctcggcagttaactgcc 30258317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 24721998 - 24721962
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactg 137  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  24721998 gcagttaactgccgaggaaaacctcggtagttaactg 24721962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 26712272 - 26712228
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    |||| ||| ||||||||||| |||||||||||||||| |||||||    
T  26712272 aaaccggcggcagttaactgccgaggaaaacctcggtagttaact 26712228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 89; Significance: 8e-43; HSPs: 3)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 15739 - 15847
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 229  Q
    |||||||||| |  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15739 gttaactgccgaggaatatgtttcatcagatgaaacagtcacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccc 15838  T
Q  230 caaattcaa 238  Q
    |||||||||    
T  15839 caaattcaa 15847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 20253 - 20114
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgttttt-gcccattcgacagttaactgccgagaaattcaaaaactggc 99  Q
    ||||||||| |||| |||||||||||||||  |||||| ||||||||||||||||||| |||  ||   ||||||||||||||| ||||||||||  |||    
T  20253 agagaattgatgtttacacattgcataaggctgagacacacgagtaatttacgttttttgcctctttagcagttaactgccgaggaattcaaaaatcggc 20154  T
Q  100 tgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    | ||||||||||||||||||| ||||||| ||| ||||||    
T  20153 tacagttaactgtcgaggaaatcctcggtagtttactgcc 20114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 15675 - 15754
Alignment:
Q  40 acgagtaatttacgtttttgcc-cattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaa 119  Q
    |||||||||||||||||||||| |||| |||||||||||| |||| ||||||||||| || |||||||||||| |||||||    
T  15675 acgagtaatttacgtttttgcctcatt-gacagttaactgtcgaggaattcaaaaaccggttgcagttaactgccgaggaa 15754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 4472 - 4316
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||| ||||  ||  | |||||||||||| |  |||||||| ||||||| |||||||||| |  || ||||||||||||||||||||||    
T  4472 cagttaactgccgaggaatttgaactccggctgcagttaaataccgaggaaatcctcggtagttaactgccgaggaa-atgtttcatcagatgaaacaac 4374  T
Q  169 cacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaat 226  Q
    ||||||||||||||||| ||||||||| | |||||||||| | ||| |||||||||||    
T  4373 cacctgctccccctacaaactattttcttgatcaacttcatttccatctccattcaat 4316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 11353 - 11449
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaagtttt 243  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||| |||| ||| ||||    
T  11353 atgtttcatcagatgaaacagccacctgctccccctacatactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttt 11449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 16095 - 15960
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||| |||| |||| || |||||||| | | || ||||||| |||||   ||||| |  ||| ||||||||||||||| ||||  ||| |  |||    
T  16095 agagaattgctgtttacactttacataaggttgtgccacacgagtattttactcatttgctccctcggcagttaactgccgaggaatttgaaatccagct 15996  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    ||||||||||| |||||||||||||||| |||||||    
T  15995 gcagttaactgccgaggaaaacctcggtagttaact 15960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 892 - 996
Alignment:
Q  103 agttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatca 202  Q
    ||||||||| |||||||||||||||| |||||||||| |  || |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||    
T  892 agttaactgccgaggaaaacctcggtagttaactgccgaggaa-atgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatca 990  T
Q  203 acttca 208  Q
    ||||||    
T  991 acttca 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 5355 - 5402
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  5355 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgcc 5402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 860 - 902
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  860 ggctgtagttaactgccgaggaaaacctcggtagttaactgcc 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 50080 - 50213
Alignment:
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||||||||||| |||||||||||||||| |||||||||| |  || |||||||||  ||||||||| | |||||||||||||||| ||||||||| ||||    
T  50080 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaatgtttcatttgatgaaacagctacctgctccccctacacactattttcttcat 50179  T
Q  201 caacttcaataccacctccattcaatccccaaat 234  Q
    || ||||| | |||| ||||||||||||| ||||    
T  50180 caccttcatttccacttccattcaatcccaaaat 50213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 208
Target Start/End: Complemental strand, 17423 - 17286
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaac 168  Q
    ||||||||||||||| ||||  ||| | ||||||||||||||| |||||||| ||||||| |||||||||| |  || |||||||||||||||||||| |    
T  17423 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgaggaa-atgtttcatcagatgaaacagc 17325  T
Q  169 cacctgctccccctacatactattttcatcatcaacttca 208  Q
    ||||||||||| ||| | ||||||||| ||||||||||||    
T  17324 cacctgctccctcta-acactattttcttcatcaacttca 17286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 472 - 357
Alignment:
Q  92 aaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactat 191  Q
    |||| ||| ||||||||||| |||||||||||||||| |||||||||| |  || |||||||||||||||||||| | || ||||||||||||| |||||    
T  472 aaaccggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaa-atgtttcatcagatgaaacagctacttgctccccctacacactat 374  T
Q  192 tttcatcatcaacttca 208  Q
    |||| ||||||||||||    
T  373 tttcttcatcaacttca 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 859 - 768
Alignment:
Q  143 aaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 234  Q
    ||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  859 aaatatgtttcatcagatgaaacagtcccctgctccccctacacactattttcatcatcaactttcataccacttccatccaatccccaaat 768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 7444 - 7241
Alignment:
Q  2 gagaattgtt-gttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    |||||||||| ||||||| ||| |||||||| ||| || | ||||||  || |||||||||   | ||||||||| ||| ||| ||||||||||| ||||    
T  7444 gagaattgttagttgacaaatttcataaggttgaggcacatgagtaaaatatgtttttgcctccttgacagttaattgctgaggaattcaaaaaccggct 7345  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcat 200  Q
    ||| | ||||| |||| ||||||||||| |||||||||| | || ||||||||||| |         ||| |||||||||||||| ||||||||||||||    
T  7344 gcaatcaactgccgagaaaaacctcggtagttaactgccgagaattatgtttcatctg---------cca-ctgctccccctacacactattttcatcat 7255  T
Q  201 caacttcaatacca 214  Q
    ||||||| ||||||    
T  7254 caacttccatacca 7241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 18003 - 18099
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||  ||| | ||||||||||||||| |||| ||| ||||||  |||||||    
T  18003 acgagtaatttacgtttttgccccctcgacagttaactgccgaggaattagaaacccggctgcagttaactgccgagtaaatcctcgggagttaact 18099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 18432 - 18295
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||| ||||||||||  | | || || ||||||| ||||||||| || |||| | ||||||||||||    ||  ||| | | |||    
T  18432 gagaattgttgttcccacgttgcataaggatgtggcacacaagtaattgacgtttttgtcccttcggcggttaactgccgaagttttagaaatccgactg 18333  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||| |||||||| |||||||||||| ||||||||||    
T  18332 cagtttactgtcgaagaaaacctcggtagttaactgcc 18295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 54841 - 54745
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaact 136  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||  ||| | ||||||||||||||| |||| ||| ||||||  |||||||    
T  54841 acgagtaatttacgtttttgccccctcgacagttaactgccgaggaattagaaacccggctgcagttaactgccgagtaaatcctcgggagttaact 54745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 54412 - 54549
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||||||||  ||| ||||||||||  | | || || ||||||| ||||||||| || |||| | ||||||||||||    ||  ||| | | |||    
T  54412 gagaattgttgttcccacgttgcataaggatgtggcacacaagtaattgacgtttttgtcccttcggcggttaactgccgaagttttagaaatccgactg 54511  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||| |||||||| |||||||||||| ||||||||||    
T  54512 cagtttactgtcgaagaaaacctcggtagttaactgcc 54549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 3820 - 3951
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||||||| |||| ||||||| ||| || || |||||  ||  |||||| ||  ||| |||||||||| |||| ||||||||||  |||||    
T  3820 gagaattgatgttgacaaattggataaggttgaggcacacaagtaaaatat-tttttgtcccctcggcagttaactgtcgaggaattcaaaaatcggctg 3918  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaa 134  Q
    |||||||||| |||||||||||||||| |||||    
T  3919 cagttaactgccgaggaaaacctcggtagttaa 3951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 25886 - 25943
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttg 59  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||    
T  25886 gagaattgttgttgacacattgcataaggctgaggcatacgagtaatttatgtttttg 25943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1785 - 1724
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgccc 62  Q
    ||||||||| ||||||||||||||||||||  ||| || |||||||||||||||||||||||    
T  1785 agagaattgatgttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccc 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 573 - 439
Alignment:
Q  2 gagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctg 101  Q
    |||||||| |||| |||||||  |||||   |||| | ||||||||  |||| |||||| |  ||| ||||||||||||||  |||| | || | |||||    
T  573 gagaattgatgtttacacatttgataagactgagaaacacgagtaaaatacgattttgctccctcggcagttaactgccgaagaattaataatccggctg 474  T
Q  102 cagttaactgtcgaggaaaacctcggttgttaact 136  Q
    ||||||||||||||||||||||||||  |||||||    
T  473 cagttaactgtcgaggaaaacctcgggagttaact 439  T

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Target: scaffold0201 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 22336 - 22474
Alignment:
Q  1 agagaattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggct 100  Q
    ||||||||| | || |||| || |||||||| | | || ||||||| |||||  ||||||||  ||| ||||||||||||||| ||||  |||   ||||    
T  22336 agagaattgctatttacactttacataaggttgtgtcacacgagtattttactcttttgccccctcggcagttaactgccgaggaatttgaaattcggct 22435  T
Q  101 gcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||  |||||||| |||||| ||||||||||    
T  22436 gcagttaactgctgaggaaaatctcggtagttaactgcc 22474  T

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Target: scaffold1500 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 831 - 761
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| |||||| |||| |||||| |||||||  | |||||||| ||||| ||||||||||    
T  831 cagttaactgccgaggaattcataaaccggctgctgttaactacctaggaaaacttcggtagttaactgcc 761  T

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Target: scaffold0388 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 11846 - 11740
Alignment:
Q  5 aattgttgttgacacattgcataaggtggagacatacgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcag 104  Q
    ||||| ||||||||||||  ||||| | |||| | || |||||  |||  |||||||| |||| ||||||||||| ||  ||||||||||| ||||||||    
T  11846 aattgctgttgacacattttataagattgagatacacaagtaaaatacacttttgccccttcggcagttaactgctgaagaattcaaaaaccggctgcag 11747  T
Q  105 ttaactg 111  Q
    |||||||    
T  11746 ttaactg 11740  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 794 - 872
Alignment:
Q  40 acgagtaatttacgtttttgcccattcgacagttaactgccgagaaattcaaaaactggctgcagttaactgtcgagga 118  Q
    ||||||||||||||||||||||| ||||  | |||||||||||  ||||  ||| | ||||||||||||||| ||||||    
T  794 acgagtaatttacgtttttgccccttcggtaattaactgccgaagaattagaaatccggctgcagttaactgccgagga 872  T

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Target: scaffold2089 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold2089
Description:

Target: scaffold2089; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 334 - 279
Alignment:
Q  147 atgtttcatcagatgaaacaaccacctgctc-cccctacatactattttcatcatca 202  Q
    |||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||    
T  334 atgtttcatcagatgaaacagccacctgctcccccctacacacta-tttcatcatca 279  T

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Target: scaffold0260 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 11816 - 11880
Alignment:
Q  130 gttaactgccaaaaaatatgtttcatcagatgaaacaaccacctgctccccctacatactatttt 194  Q
    |||||||||| |  || |||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  11816 gttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctacacactatttt 11880  T

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Target: scaffold0101 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 36612 - 36536
Alignment:
Q  64 ttcgacagttaactgccgagaaattcaaaaa-ctggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||| |||||||||||||| |  || ||||| | ||||||| ||||||| |||||||||||||||| ||||||||||    
T  36612 ttcggcagttaactgccgaaattttgaaaaatccggctgcaattaactgccgaggaaaacctcggtagttaactgcc 36536  T

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Target: scaffold0199 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 12432 - 12390
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||    
T  12432 ggctgcagttaactgccgatgaaaacctcggtagttaactgcc 12390  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 65347 - 65389
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    |||||||||||||||||||||||||| ||||  ||||||||||    
T  65347 ggctgcagttaactgtcgaggaaaacttcggcagttaactgcc 65389  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 232876 - 232834
Alignment:
Q  97 ggctgcagttaactgtcgaggaaaacctcggttgttaactgcc 139  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||    
T  232876 ggctgcaattaactgccgaggaaaacctcggtagttaactgcc 232834  T

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Target: scaffold0513 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 8200 - 8272
Alignment:
Q  69 cagttaactgccgagaaattcaaaaactggctgcagttaactgtcgaggaaaacctcggttgttaactgccaa 141  Q
    |||||||||||| || ||||  ||| | || ||||||||||||  || |||||||||||| ||||||||||||    
T  8200 cagttaactgccaaggaatttgaaatccggatgcagttaactgctgaagaaaacctcggtagttaactgccaa 8272  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 235933 - 235969
Alignment:
Q  102 cagttaactgtcgaggaaaacctcggttgttaactgc 138  Q
    |||||||||| |||||||||||||||| |||||||||    
T  235933 cagttaactgccgaggaaaacctcggtagttaactgc 235969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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