View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18240_low_16 (Length: 341)

Name: NF18240_low_16
Description: NF18240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18240_low_16
NF18240_low_16
[»] chr5 (35 HSPs)
chr5 (13-130)||(7224730-7224847)
chr5 (286-335)||(21319408-21319457)
chr5 (286-335)||(6518982-6519031)
chr5 (286-335)||(7317034-7317083)
chr5 (286-335)||(10345030-10345079)
chr5 (286-335)||(14620592-14620641)
chr5 (286-335)||(26660761-26660810)
chr5 (286-335)||(26932354-26932403)
chr5 (286-335)||(27797787-27797836)
chr5 (286-335)||(35765998-35766047)
chr5 (286-335)||(39566189-39566238)
chr5 (286-335)||(42104161-42104210)
chr5 (286-328)||(15167115-15167157)
chr5 (286-335)||(2729884-2729933)
chr5 (286-335)||(3025029-3025078)
chr5 (286-335)||(3306107-3306156)
chr5 (286-335)||(4630871-4630920)
chr5 (286-335)||(7579967-7580016)
chr5 (286-335)||(13761563-13761612)
chr5 (286-335)||(38362235-38362284)
chr5 (286-335)||(39504728-39504778)
chr5 (286-335)||(9066521-9066570)
chr5 (286-335)||(24280999-24281048)
chr5 (286-335)||(24381164-24381213)
chr5 (286-335)||(34446125-34446174)
chr5 (286-335)||(36073728-36073777)
chr5 (286-335)||(36164893-36164942)
chr5 (286-335)||(39729965-39730014)
chr5 (286-328)||(43584482-43584524)
chr5 (286-335)||(8336507-8336556)
chr5 (290-335)||(11977598-11977643)
chr5 (286-335)||(25362898-25362947)
chr5 (298-335)||(27600417-27600454)
chr5 (286-323)||(42978176-42978213)
chr5 (174-210)||(7224582-7224618)
[»] chr8 (34 HSPs)
chr8 (286-337)||(39765955-39766006)
chr8 (286-335)||(6374420-6374469)
chr8 (286-335)||(40228580-40228629)
chr8 (286-335)||(40362441-40362490)
chr8 (286-335)||(43084725-43084774)
chr8 (286-332)||(17920962-17921008)
chr8 (286-335)||(15160544-15160593)
chr8 (286-335)||(31693719-31693768)
chr8 (286-335)||(39463265-39463314)
chr8 (286-335)||(39698764-39698813)
chr8 (286-335)||(514880-514929)
chr8 (286-335)||(4989484-4989533)
chr8 (286-335)||(6116103-6116152)
chr8 (286-335)||(43974889-43974938)
chr8 (236-335)||(15227522-15227622)
chr8 (279-335)||(17655906-17655962)
chr8 (286-335)||(7839464-7839513)
chr8 (286-335)||(9812179-9812228)
chr8 (290-335)||(29025844-29025889)
chr8 (282-335)||(31899346-31899399)
chr8 (286-335)||(35356313-35356362)
chr8 (286-335)||(36921363-36921412)
chr8 (286-335)||(37559631-37559680)
chr8 (286-335)||(43448722-43448771)
chr8 (286-335)||(396311-396361)
chr8 (286-335)||(4760656-4760705)
chr8 (286-335)||(5295504-5295553)
chr8 (286-335)||(9304731-9304780)
chr8 (286-335)||(9880599-9880648)
chr8 (286-335)||(19438242-19438291)
chr8 (286-327)||(43561345-43561386)
chr8 (286-335)||(44713540-44713589)
chr8 (286-335)||(45358992-45359041)
chr8 (279-323)||(29312303-29312347)
[»] scaffold0332 (1 HSPs)
scaffold0332 (286-335)||(3908-3957)
[»] chr7 (44 HSPs)
chr7 (286-335)||(27947597-27947646)
chr7 (286-335)||(10599219-10599268)
chr7 (286-335)||(19105097-19105146)
chr7 (286-335)||(22298002-22298051)
chr7 (286-335)||(37490790-37490839)
chr7 (286-335)||(42880030-42880079)
chr7 (286-335)||(45948726-45948775)
chr7 (286-333)||(2297044-2297091)
chr7 (246-335)||(715959-716049)
chr7 (286-328)||(27935773-27935815)
chr7 (286-335)||(1741997-1742046)
chr7 (286-335)||(10476142-10476191)
chr7 (286-335)||(12977782-12977831)
chr7 (286-335)||(13405223-13405272)
chr7 (286-335)||(24680134-24680183)
chr7 (286-335)||(29531031-29531080)
chr7 (286-335)||(37502325-37502374)
chr7 (286-335)||(44567137-44567186)
chr7 (286-335)||(48684729-48684778)
chr7 (286-335)||(48843558-48843607)
chr7 (286-329)||(18270583-18270626)
chr7 (292-335)||(25440884-25440927)
chr7 (286-333)||(34274800-34274847)
chr7 (286-328)||(40927169-40927211)
chr7 (286-335)||(8603981-8604030)
chr7 (286-335)||(18292341-18292390)
chr7 (286-335)||(28289221-28289270)
chr7 (286-335)||(30312464-30312513)
chr7 (232-269)||(36446977-36447014)
chr7 (286-335)||(40753524-40753573)
chr7 (286-335)||(42285914-42285963)
chr7 (286-335)||(44453141-44453190)
chr7 (296-335)||(31418609-31418648)
chr7 (281-335)||(6563510-6563564)
chr7 (289-335)||(24133226-24133272)
chr7 (286-320)||(45933695-45933729)
chr7 (290-327)||(6747237-6747274)
chr7 (286-335)||(21752207-21752256)
chr7 (286-335)||(23935428-23935477)
chr7 (286-335)||(24780402-24780451)
chr7 (286-335)||(31929956-31930005)
chr7 (286-335)||(39557328-39557377)
chr7 (279-335)||(41137726-41137783)
chr7 (286-326)||(40339465-40339505)
[»] chr3 (43 HSPs)
chr3 (286-335)||(3152901-3152950)
chr3 (286-335)||(50038266-50038315)
chr3 (286-335)||(9189530-9189579)
chr3 (286-335)||(30431126-30431175)
chr3 (286-335)||(32492276-32492325)
chr3 (286-335)||(36460812-36460861)
chr3 (286-335)||(38016381-38016430)
chr3 (286-335)||(53200775-53200824)
chr3 (286-335)||(19115393-19115442)
chr3 (286-335)||(36729905-36729954)
chr3 (286-335)||(39356891-39356940)
chr3 (286-335)||(42571624-42571673)
chr3 (286-335)||(44676227-44676276)
chr3 (286-335)||(45213817-45213866)
chr3 (286-335)||(47895439-47895488)
chr3 (286-335)||(48901726-48901775)
chr3 (286-335)||(48903292-48903341)
chr3 (286-335)||(50646205-50646254)
chr3 (286-335)||(52654310-52654359)
chr3 (291-335)||(36844837-36844881)
chr3 (286-333)||(2458013-2458060)
chr3 (286-333)||(30426421-30426468)
chr3 (286-335)||(4758997-4759046)
chr3 (286-335)||(11019921-11019970)
chr3 (286-335)||(11393551-11393600)
chr3 (286-335)||(22857096-22857145)
chr3 (286-335)||(33024395-33024444)
chr3 (286-335)||(41850396-41850445)
chr3 (286-335)||(47137969-47138018)
chr3 (286-335)||(51398016-51398065)
chr3 (286-333)||(30315315-30315362)
chr3 (286-333)||(33194128-33194175)
chr3 (286-333)||(38140956-38141003)
chr3 (286-333)||(38363791-38363838)
chr3 (286-335)||(4392202-4392251)
chr3 (286-335)||(7230991-7231040)
chr3 (286-335)||(19373592-19373641)
chr3 (286-334)||(23208387-23208433)
chr3 (286-335)||(40487834-40487883)
chr3 (286-335)||(42071991-42072040)
chr3 (286-335)||(42886757-42886806)
chr3 (286-335)||(50088411-50088460)
chr3 (295-335)||(35557853-35557893)
[»] chr2 (45 HSPs)
chr2 (286-335)||(18719530-18719579)
chr2 (286-335)||(441329-441378)
chr2 (286-335)||(16463130-16463179)
chr2 (286-335)||(18579173-18579222)
chr2 (286-335)||(29808818-29808867)
chr2 (286-335)||(43427385-43427434)
chr2 (286-335)||(43971510-43971559)
chr2 (286-335)||(45301771-45301820)
chr2 (236-335)||(16792439-16792538)
chr2 (286-332)||(17703025-17703071)
chr2 (286-335)||(4133030-4133079)
chr2 (286-335)||(4469507-4469556)
chr2 (286-335)||(6220502-6220551)
chr2 (286-335)||(12342099-12342148)
chr2 (286-335)||(27964468-27964517)
chr2 (286-335)||(29396778-29396827)
chr2 (286-335)||(38926612-38926661)
chr2 (287-335)||(45081998-45082046)
chr2 (286-333)||(5717519-5717566)
chr2 (286-333)||(28072573-28072620)
chr2 (286-333)||(29411702-29411749)
chr2 (233-335)||(32228109-32228212)
chr2 (286-332)||(40608705-40608750)
chr2 (286-335)||(7644652-7644701)
chr2 (286-335)||(9391656-9391705)
chr2 (286-335)||(11188590-11188639)
chr2 (286-335)||(12566078-12566127)
chr2 (286-335)||(13562000-13562049)
chr2 (286-331)||(14833837-14833882)
chr2 (286-335)||(22620432-22620481)
chr2 (286-335)||(25383582-25383631)
chr2 (286-335)||(36177982-36178031)
chr2 (286-333)||(34546431-34546478)
chr2 (286-335)||(37038867-37038913)
chr2 (286-328)||(4051809-4051851)
chr2 (286-328)||(35799209-35799251)
chr2 (286-335)||(7028910-7028959)
chr2 (286-335)||(14285944-14285993)
chr2 (286-335)||(16807615-16807664)
chr2 (286-335)||(16846896-16846945)
chr2 (286-335)||(17695923-17695972)
chr2 (286-335)||(30855111-30855159)
chr2 (291-328)||(42753756-42753793)
chr2 (286-335)||(45423624-45423673)
chr2 (295-335)||(1423206-1423246)
[»] chr1 (49 HSPs)
chr1 (286-335)||(25487094-25487143)
chr1 (234-335)||(10842733-10842835)
chr1 (235-335)||(50249263-50249365)
chr1 (286-335)||(15823040-15823089)
chr1 (286-335)||(26352177-26352226)
chr1 (286-335)||(29567902-29567951)
chr1 (286-335)||(32807034-32807083)
chr1 (286-335)||(40717392-40717441)
chr1 (286-335)||(50094235-50094284)
chr1 (286-328)||(15573613-15573655)
chr1 (289-335)||(35848029-35848075)
chr1 (286-335)||(5463581-5463630)
chr1 (286-335)||(12591178-12591227)
chr1 (286-335)||(13408361-13408410)
chr1 (286-335)||(14593416-14593465)
chr1 (286-335)||(26595165-26595214)
chr1 (286-335)||(27720964-27721013)
chr1 (286-335)||(34032176-34032225)
chr1 (286-335)||(34047331-34047380)
chr1 (286-335)||(44258603-44258652)
chr1 (286-335)||(46045979-46046028)
chr1 (290-335)||(46286914-46286959)
chr1 (286-335)||(1740737-1740786)
chr1 (286-335)||(9915449-9915498)
chr1 (286-335)||(16757290-16757339)
chr1 (286-335)||(25151821-25151870)
chr1 (286-335)||(26755226-26755275)
chr1 (286-335)||(27208995-27209044)
chr1 (286-335)||(31491866-31491915)
chr1 (288-333)||(34110535-34110580)
chr1 (286-335)||(38531393-38531442)
chr1 (286-335)||(44108605-44108654)
chr1 (286-335)||(44557140-44557189)
chr1 (286-335)||(48025350-48025399)
chr1 (286-335)||(49468807-49468856)
chr1 (286-335)||(14373509-14373558)
chr1 (286-335)||(24483394-24483443)
chr1 (286-335)||(24611616-24611665)
chr1 (286-335)||(24884421-24884470)
chr1 (286-335)||(30292946-30292995)
chr1 (286-335)||(31798595-31798644)
chr1 (286-335)||(33622461-33622510)
chr1 (279-335)||(43358296-43358353)
chr1 (286-335)||(46554804-46554853)
chr1 (286-335)||(48009016-48009065)
chr1 (294-335)||(51244933-51244973)
chr1 (286-335)||(52024330-52024379)
chr1 (295-335)||(43759347-43759387)
chr1 (299-335)||(49402967-49403003)
[»] chr4 (49 HSPs)
chr4 (286-333)||(56460089-56460136)
chr4 (286-335)||(4505343-4505392)
chr4 (286-335)||(19451313-19451362)
chr4 (286-335)||(19878654-19878703)
chr4 (286-335)||(20448045-20448094)
chr4 (286-335)||(39982109-39982158)
chr4 (286-335)||(45043690-45043739)
chr4 (286-335)||(52957892-52957941)
chr4 (286-335)||(1819568-1819617)
chr4 (286-335)||(2728500-2728549)
chr4 (286-335)||(6991363-6991412)
chr4 (286-335)||(21864485-21864534)
chr4 (286-335)||(21920346-21920395)
chr4 (286-335)||(37624562-37624611)
chr4 (286-335)||(40345449-40345498)
chr4 (286-335)||(52915644-52915693)
chr4 (286-334)||(25231181-25231229)
chr4 (286-334)||(50621290-50621338)
chr4 (286-333)||(52253851-52253898)
chr4 (286-328)||(49089470-49089512)
chr4 (286-335)||(50203082-50203129)
chr4 (286-335)||(7906098-7906147)
chr4 (286-335)||(10573256-10573305)
chr4 (286-335)||(19930720-19930769)
chr4 (286-335)||(22220461-22220510)
chr4 (286-335)||(29370609-29370658)
chr4 (286-335)||(30261265-30261314)
chr4 (286-335)||(31917962-31918011)
chr4 (286-335)||(41496211-41496260)
chr4 (286-335)||(44571967-44572016)
chr4 (286-335)||(47817744-47817793)
chr4 (286-335)||(49080579-49080627)
chr4 (286-335)||(52848156-52848205)
chr4 (286-325)||(27943658-27943697)
chr4 (286-333)||(51733598-51733645)
chr4 (286-328)||(40837136-40837178)
chr4 (286-335)||(2493108-2493157)
chr4 (294-335)||(8971056-8971097)
chr4 (286-335)||(24940885-24940934)
chr4 (286-335)||(29519627-29519676)
chr4 (286-335)||(34316228-34316277)
chr4 (306-335)||(38510347-38510376)
chr4 (286-335)||(41920411-41920460)
chr4 (286-335)||(45839643-45839692)
chr4 (306-335)||(50623109-50623138)
chr4 (286-335)||(54042285-54042334)
chr4 (171-207)||(10046515-10046551)
chr4 (291-335)||(25123828-25123872)
chr4 (287-335)||(44061015-44061063)
[»] scaffold0110 (1 HSPs)
scaffold0110 (286-335)||(24838-24887)
[»] scaffold0565 (1 HSPs)
scaffold0565 (286-335)||(9739-9788)
[»] scaffold0294 (1 HSPs)
scaffold0294 (286-335)||(3602-3651)
[»] scaffold0182 (1 HSPs)
scaffold0182 (286-335)||(18352-18401)
[»] chr6 (20 HSPs)
chr6 (286-335)||(234040-234089)
chr6 (286-335)||(4850593-4850642)
chr6 (286-335)||(18737188-18737237)
chr6 (286-335)||(19674986-19675035)
chr6 (286-335)||(24163812-24163861)
chr6 (286-335)||(29399952-29400001)
chr6 (285-335)||(12063608-12063658)
chr6 (286-328)||(13503953-13503995)
chr6 (286-335)||(8030648-8030697)
chr6 (286-327)||(9940654-9940695)
chr6 (286-335)||(29713504-29713553)
chr6 (286-335)||(31233723-31233772)
chr6 (286-328)||(12588532-12588574)
chr6 (297-335)||(34513701-34513739)
chr6 (286-335)||(10520737-10520786)
chr6 (286-335)||(23259423-23259472)
chr6 (286-335)||(24556026-24556075)
chr6 (290-335)||(32429294-32429339)
chr6 (295-335)||(577076-577116)
chr6 (295-335)||(3988841-3988881)
[»] scaffold2107 (1 HSPs)
scaffold2107 (286-332)||(614-660)
[»] scaffold0078 (1 HSPs)
scaffold0078 (286-335)||(1511-1560)
[»] scaffold0502 (1 HSPs)
scaffold0502 (286-333)||(671-718)
[»] scaffold0048 (1 HSPs)
scaffold0048 (286-333)||(62639-62686)
[»] scaffold0983 (1 HSPs)
scaffold0983 (279-335)||(784-841)
[»] scaffold0300 (1 HSPs)
scaffold0300 (286-335)||(4571-4620)
[»] scaffold0015 (1 HSPs)
scaffold0015 (286-335)||(21179-21228)


Alignment Details
Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 7224847 - 7224730
Alignment:
Q  13 agaagaagcgtgagtctgactgtttgagaagaagaaacaannnnnnnaagtggagcctcacgtttgatgaaggagacgcaaatagaagaaactcaacaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7224847 agaagaagcgtgagtctgactgtttgagaagaagaaacaatttttttaagtggagcctcacgtttgatgaaggagacgcaaatagaagaaactcaacaaa 7224748  T
Q  113 tagggtttaagaatttta 130  Q
    ||||||||||||||||||    
T  7224747 tagggtttaagaatttta 7224730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 21319457 - 21319408
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21319457 aaatgaatgtcactttcagcttccaatgcaataataactttttcttttca 21319408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 6518982 - 6519031
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  6518982 aaatgaatgtcgctttcagttttcaatgcaataataactttttcttttca 6519031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 7317034 - 7317083
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  7317034 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 7317083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 10345079 - 10345030
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  10345079 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 10345030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 14620641 - 14620592
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  14620641 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 14620592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 26660761 - 26660810
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  26660761 aaatgaatgtcactttcaattttcaatgcaataataactttttcttttca 26660810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 26932354 - 26932403
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  26932354 aaatgaatgtcactttcaattttcaatgcaataataactttttcttttca 26932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 27797787 - 27797836
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  27797787 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 27797836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 35766047 - 35765998
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  35766047 aaatgaatgtcactttcagttttcaatacaataataactttttcttttca 35765998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 39566189 - 39566238
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  39566189 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 39566238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 42104210 - 42104161
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  42104210 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 42104161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 15167157 - 15167115
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  15167157 aaatgaatgtcactttcagttttcaatgcaataataacttttt 15167115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 2729933 - 2729884
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  2729933 aaatgaatgtcactttcactttccaatgcaataataactttttcttttca 2729884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 3025078 - 3025029
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||    
T  3025078 aaatgaatgtcacttttagtttccaatgcaataataactttttcttttca 3025029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 3306156 - 3306107
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  3306156 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttca 3306107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 4630871 - 4630920
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||||||    
T  4630871 aaataaatgtcactttcagttttcaatacaataataactttttcttttca 4630920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 7580016 - 7579967
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  7580016 aaatgaatgttactttcagttttcaatacaataataactttttcttttca 7579967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 13761563 - 13761612
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  13761563 aaatgaatgtcactttcacttttcaatgcaataataaatttttcttttca 13761612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 38362284 - 38362235
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  |||||||||||||||||||||| |||||||    
T  38362284 aaatgaatgtcactttcaattttcaatgcaataataacttttccttttca 38362235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 39504728 - 39504778
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaa-taataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  39504728 aaatgaatgtcactttcagtttccaatgcaattaataactttttcttttca 39504778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 9066570 - 9066521
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||||||| |||||||||||||||||  |||||||||||    
T  9066570 aaatgaatgttactttcagttttcaatgcaataataaaattttcttttca 9066521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 24280999 - 24281048
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || || |||||||||||||| ||||||||||||    
T  24280999 aaatgaatgtcacttttagtttccaatgcaataataattttttcttttca 24281048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 24381213 - 24381164
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || || |||||||||||||| ||||||||||||    
T  24381213 aaatgaatgtcacttttagtttccaatgcaataataattttttcttttca 24381164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 34446174 - 34446125
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| ||||||| |||||||||| |||||||||||    
T  34446174 aaatgaatgtcattttcagttttcaatacaataataacattttcttttca 34446125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 36073777 - 36073728
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| ||| |  ||||||||||||||||||||||||||||||    
T  36073777 aaatgaatgtcattttaaattttcaatgcaataataactttttcttttca 36073728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 36164893 - 36164942
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || ||||||| |||||||||||||||||||    
T  36164893 aaatgaatgtcattttcagtttccaatgcagtaataactttttcttttca 36164942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 39729965 - 39730014
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| | |||||| || |||||||||||||||||||||||||||    
T  39729965 aaatgaatgttattttcagtttccaatgcaataataactttttcttttca 39730014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 43584524 - 43584482
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    |||||||||||  |||||| |||||||||||||||||||||||    
T  43584524 aaatgaatgtcgttttcagttttcaatgcaataataacttttt 43584482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 8336556 - 8336507
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||| ||  |||||||||||||||||||| || ||||||    
T  8336556 aaatgaatgtcacttccatttttcaatgcaataataacttctttttttca 8336507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 11977598 - 11977643
Alignment:
Q  290 gaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||| || |||| | ||||||||||||||||||||    
T  11977598 gaatgtcactttcagtttccaataccataataactttttcttttca 11977643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 25362947 - 25362898
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||||||| ||  ||||||||||| ||||||||||||||    
T  25362947 aaatgaatgttactttcagtttcgaatgcaataatgactttttcttttca 25362898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 27600417 - 27600454
Alignment:
Q  298 ctttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||| || |||||||||||||||||||||||||||    
T  27600417 ctttcagtttccaatgcaataataactttttcttttca 27600454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 42978213 - 42978176
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataac 323  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  42978213 aaatgaatatcactttcagttttcaatgcaataataac 42978176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 7224618 - 7224582
Alignment:
Q  174 tttattaaagccctaaaatataaaagataggagatgc 210  Q
    ||||||||| | |||||||||||||||||||||||||    
T  7224618 tttattaaaacactaaaatataaaagataggagatgc 7224582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 39766006 - 39765955
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttcact 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39766006 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcact 39765955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 6374420 - 6374469
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6374420 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 6374469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 40228580 - 40228629
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40228580 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 40228629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 40362441 - 40362490
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40362441 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 40362490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 43084774 - 43084725
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43084774 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 43084725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 17920962 - 17921008
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttt 332  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  17920962 aaatgaatgtcactttcagttttcaatgcaataataactttttcttt 17921008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 15160593 - 15160544
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  15160593 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 15160544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 31693768 - 31693719
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  31693768 aaatgaatatcactttcagttttcaatgcaataataactttttcttttca 31693719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 39463265 - 39463314
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  39463265 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 39463314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 39698813 - 39698764
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  39698813 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 39698764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 514880 - 514929
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  514880 aaatgaatgtcactttcaattttcaatgcaataataattttttcttttca 514929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 4989484 - 4989533
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| |||||||||| || |||||||||||||||||||||||||||    
T  4989484 aaatgaatatcactttcagtttccaatgcaataataactttttcttttca 4989533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 6116152 - 6116103
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  6116152 aaatgaatatcactttcggttttcaatgcaataataactttttcttttca 6116103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 43974938 - 43974889
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||    
T  43974938 aaatgaatgtcacttttagtttccaatgcaataataactttttcttttca 43974889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 335
Target Start/End: Original strand, 15227522 - 15227622
Alignment:
Q  236 tactccatctgttttaagatgagtgttgctttagcnnnnnnnnttgtttcaaa-tgaatgtcactttcagctttcaatgcaataataactttttcttttc 334  Q
    ||||||||| ||||||| |||||||||| |||| |        |||||||||| |||||||||||||||  ||||||||||||||||| | |||||||||    
T  15227522 tactccatccgttttaaaatgagtgttgttttacctaaaaatattgtttcaaaatgaatgtcactttcaaatttcaatgcaataataaatgtttcttttc 15227621  T
Q  335 a 335  Q
    |    
T  15227622 a 15227622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 17655906 - 17655962
Alignment:
Q  279 ttgtttcaaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||  ||||| || ||||| ||||||||||||||||||||||||||||||    
T  17655906 ttgtttcaaaataatgttaccttcagttttcaatgcaataataactttttcttttca 17655962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 7839464 - 7839513
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || ||||||||||||||| |||||||||||    
T  7839464 aaatgaatgtcactttcaatttccaatgcaataataaccttttcttttca 7839513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 9812179 - 9812228
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||  ||||||||||||||||||| ||||||    
T  9812179 aaatgaatgtcactttcagtttctaatgcaataataactttttattttca 9812228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 29025889 - 29025844
Alignment:
Q  290 gaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| || || |||||||||||||||||||||||||||    
T  29025889 gaatgtcactttaagtttccaatgcaataataactttttcttttca 29025844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 31899399 - 31899346
Alignment:
Q  282 tttcaaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||| || |||||||||| || |||||||||||||| ||||||||||||    
T  31899399 tttcaaatggatatcactttcagtttccaatgcaataataattttttcttttca 31899346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 35356313 - 35356362
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| ||| |||||| || |||||||||||||||||||||||||||    
T  35356313 aaatgaatatcattttcagtttccaatgcaataataactttttcttttca 35356362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 36921363 - 36921412
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||| ||||||||||  ||||||||||||||||| ||||||||||||    
T  36921363 aaatgaacgtcactttcaattttcaatgcaataataattttttcttttca 36921412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 37559680 - 37559631
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| || |||| ||||||||||||||||||||||    
T  37559680 aaatcaatgtcactttcagtttccaatacaataataactttttcttttca 37559631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 43448722 - 43448771
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| |||||||||| || |||||||||||||||||||| ||||||    
T  43448722 aaatgaatatcactttcagtttccaatgcaataataacttttttttttca 43448771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 396361 - 396311
Alignment:
Q  286 aaatgaatgtcacttt-cagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||||    
T  396361 aaatgaatgtcacttttcagtttgaaatgcaataataactttttcttttca 396311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 4760705 - 4760656
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || |||||||| ||||| ||||||||||||    
T  4760705 aaatgaatgtcactttcattttccaatgcaacaataattttttcttttca 4760656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 5295553 - 5295504
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || ||  ||||||||||||| ||||||||||||    
T  5295553 aaatgaatgtcactttaagtttctaatgcaataataattttttcttttca 5295504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 9304780 - 9304731
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| ||||| || || |||||||||||||| ||||||||||||    
T  9304780 aaatgaatgtgacttttagtttccaatgcaataataattttttcttttca 9304731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 9880648 - 9880599
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||  ||| || |||||||||||||| ||||||||||||    
T  9880648 aaatgaatgtcactcacagtttccaatgcaataataattttttcttttca 9880599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 19438242 - 19438291
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||||| |||| || ||||| |||||||||||||||||||||    
T  19438242 aaataaatgtcactctcagtttccaatgtaataataactttttcttttca 19438291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 43561345 - 43561386
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttt 327  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||    
T  43561345 aaatgaatgtcaccttcagttttcaatgcaataataattttt 43561386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 44713540 - 44713589
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| |||||||||  || |||||||||||||||||||| ||||||    
T  44713540 aaatgaatatcactttcattttccaatgcaataataacttttttttttca 44713589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 45359041 - 45358992
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||| ||||| |||||  ||||||||||||||||| ||||||||||||    
T  45359041 aaatgactgtcattttcaattttcaatgcaataataattttttcttttca 45358992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 29312347 - 29312303
Alignment:
Q  279 ttgtttcaaatgaatgtcactttcagctttcaatgcaataataac 323  Q
    |||||| |||||||||||| |||||| || |||||||||||||||    
T  29312347 ttgtttaaaatgaatgtcattttcagtttccaatgcaataataac 29312303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 3957 - 3908
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3957 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 3908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 27947646 - 27947597
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27947646 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 27947597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 10599219 - 10599268
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  10599219 aaatgaatatcactttcagttttcaatgcaataataactttttcttttca 10599268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 19105146 - 19105097
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  19105146 aaatgaatgtcactttcagtttttaatgcaataataactttttcttttca 19105097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 22298002 - 22298051
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  22298002 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 22298051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 37490790 - 37490839
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  37490790 aaatgaatgtcactttcagttttcaatgcaataataattttttcttttca 37490839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 42880079 - 42880030
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  42880079 aaatgaatgtcactttcagttttcaatgtaataataactttttcttttca 42880030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 45948775 - 45948726
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  45948775 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 45948726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 2297044 - 2297091
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  2297044 aaatgaatgtcactttcagttttcaatgcaataatatctttttctttt 2297091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 716049 - 715959
Alignment:
Q  246 gttttaagatgagtgttgctttagcnnnnnnnnttgtttcaaa-tgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||| |||||||| ||||||||        |||||||||| |||||||||||||||| || |||||||||||||| ||||||||||||    
T  716049 gttttaaaatgagtgtcgctttagccaaaaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttca 715959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 27935773 - 27935815
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  27935773 aaatgaatgtcactttcagttttcaatgcaataataacttttt 27935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 1741997 - 1742046
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  1741997 aaatgaatgtcactttcagtttccaatgcaataataaccttttcttttca 1742046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 10476142 - 10476191
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  10476142 aaatgaatgtcactttcactttccaatgcaataataactttttcttttca 10476191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 12977831 - 12977782
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  12977831 aaatgaatgtcactttcaatttccaatgcaataataactttttcttttca 12977782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 13405272 - 13405223
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  13405272 aaatgaatgtcactttcagtttccaatgtaataataactttttcttttca 13405223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 24680134 - 24680183
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||||    
T  24680134 aaatgaatgtcattttcagtttccaatgcaataataactttttcttttca 24680183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 29531080 - 29531031
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  29531080 aaatgaatgtcattttcagttttcaatgcaataataattttttcttttca 29531031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 37502325 - 37502374
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  37502325 aaatgaacgtcactttcagtttccaatgcaataataactttttcttttca 37502374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 44567186 - 44567137
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  44567186 aaatgaatgtcactttcaattttcaatgcaataataaatttttcttttca 44567137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 48684729 - 48684778
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||    
T  48684729 aaatgaatgtcactttcggtttccaatgcaataataactttttcttttca 48684778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 48843558 - 48843607
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  48843558 aaatgaatgtcactttcagttttcaatgcaataataattttttctcttca 48843607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 329
Target Start/End: Original strand, 18270583 - 18270626
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttc 329  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  18270583 aaatgaatgtcactttcagtttccaatgcaataataactttttc 18270626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 25440884 - 25440927
Alignment:
Q  292 atgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||| || |||||||||||||||||||||||||||    
T  25440884 atgtcactttcagtttccaatgcaataataactttttcttttca 25440927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 34274800 - 34274847
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||    
T  34274800 aaatgaatgtcactttcagtttccaatgcaataataaccttttctttt 34274847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 40927169 - 40927211
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  40927169 aaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 8603981 - 8604030
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||| ||||||||||  || |||||||||||||||||||||||||||    
T  8603981 aaatgaacgtcactttcaatttccaatgcaataataactttttcttttca 8604030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 18292341 - 18292390
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || ||||||||||||||||||||| |||||    
T  18292341 aaatgaatgtcactttcaatttccaatgcaataataactttttcctttca 18292390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 28289221 - 28289270
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||||||| || |||||||||||||||||| |||||||||||    
T  28289221 aaataaatgtcactttgagttttcaatgcaataataacattttcttttca 28289270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 30312464 - 30312513
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | ||||||| ||||||||| ||||||||||||    
T  30312464 aaatgaatgtcactttcggttttcaatacaataataattttttcttttca 30312513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 36446977 - 36447014
Alignment:
Q  232 ataatactccatctgttttaagatgagtgttgctttag 269  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  36446977 ataatactccatctgttttaaaatgagtgttgctttag 36447014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 40753573 - 40753524
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| |||||||| |||||||| ||||||||||||    
T  40753573 aaatgaatgtcattttcagttttcaatgtaataataattttttcttttca 40753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 42285914 - 42285963
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||||||||| ||||||||||||    
T  42285914 aaatgaatgtcattttcagtttccaatgcaataataattttttcttttca 42285963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 44453141 - 44453190
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||| | ||||||    
T  44453141 aaatgaatgtcactttcagtttccaatgcaataataactttcttttttca 44453190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 31418648 - 31418609
Alignment:
Q  296 cactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  31418648 cactttcagtttccaatgcaataataactttttcttttca 31418609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 6563564 - 6563510
Alignment:
Q  281 gtttcaaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||| ||||||||||| ||| |||  |||||||||||||||||||||    
T  6563564 gtttaaaatgaacgtcactttcagtttttaatttaataataactttttcttttca 6563510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 24133272 - 24133226
Alignment:
Q  289 tgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||||||| || |||||||||||||| ||||||||||||    
T  24133272 tgaacgtcactttcagtttccaatgcaataataattttttcttttca 24133226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 45933729 - 45933695
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataat 320  Q
    ||||||||||||||||||| |||||||||||||||    
T  45933729 aaatgaatgtcactttcagttttcaatgcaataat 45933695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 6747237 - 6747274
Alignment:
Q  290 gaatgtcactttcagctttcaatgcaataataactttt 327  Q
    ||||||||||||||| || |||||||||||||||||||    
T  6747237 gaatgtcactttcagtttccaatgcaataataactttt 6747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 21752256 - 21752207
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||| |||||| || ||||||||||||||||||||| |||||    
T  21752256 aaataaatgtcattttcagtttccaatgcaataataactttttcgtttca 21752207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 23935428 - 23935477
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||  |||||| || |||||||||||||||||||||||||||    
T  23935428 aaataaatgtcgttttcagtttccaatgcaataataactttttcttttca 23935477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 24780451 - 24780402
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||  ||||||||||||| ||||| ||||||    
T  24780451 aaatgaatgtcactttcagtttctaatgcaataataattttttattttca 24780402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 31930005 - 31929956
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| | | |||||| ||||||||||||||||| ||||||||||||    
T  31930005 aaatgaatattattttcagttttcaatgcaataataattttttcttttca 31929956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 39557328 - 39557377
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| |||||||| |||||||| ||||||| ||||    
T  39557328 aaataaatgtcactttcagttttcaatgtaataataattttttctcttca 39557377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 41137726 - 41137783
Alignment:
Q  279 ttgtttca-aatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| |||||||| |||||| || || |||||||||||||| ||||||||||||    
T  41137726 ttgtttcacaatgaatgccacttttagtttccaatgcaataataattttttcttttca 41137783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 40339465 - 40339505
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttt 326  Q
    |||||| |||||||||||  |||||||||||||||||||||    
T  40339465 aaatgactgtcactttcaattttcaatgcaataataacttt 40339505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 3152950 - 3152901
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3152950 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 3152901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 50038315 - 50038266
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50038315 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 50038266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 9189579 - 9189530
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  9189579 aaatgaatgtcactttcagttttcaatgaaataataactttttcttttca 9189530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 30431126 - 30431175
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  30431126 aaatgaatgtcactttcagttttcaatgcaataataattttttcttttca 30431175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 32492325 - 32492276
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  32492325 aaatgaatgtcactttcaattttcaatgcaataataactttttcttttca 32492276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 36460812 - 36460861
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  36460812 aaatgaatatcactttcagttttcaatgcaataataactttttcttttca 36460861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 38016381 - 38016430
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  38016381 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 38016430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 53200824 - 53200775
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||    
T  53200824 aaatgaatgtcacttttagttttcaatgcaataataactttttcttttca 53200775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 19115393 - 19115442
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||    
T  19115393 aaatgaatgtcactttgagtttccaatgcaataataactttttcttttca 19115442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 36729954 - 36729905
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  36729954 aaatgaatgtcactttcaatttccaatgcaataataactttttcttttca 36729905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 39356891 - 39356940
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  39356891 aaataaatgtcactttcagttttcaatgcaataataacattttcttttca 39356940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 42571673 - 42571624
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  42571673 aaatgaatgtcacttgcagtttccaatgcaataataactttttcttttca 42571624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 44676227 - 44676276
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||||||    
T  44676227 aaatgaatgtcactttcagtttccaatgcaatgataactttttcttttca 44676276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 45213866 - 45213817
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  45213866 aaatgaatgtcactttcagtttctaatgcaataataactttttcttttca 45213817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 47895488 - 47895439
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  47895488 aaatgaatgtcactttcaatttccaatgcaataataactttttcttttca 47895439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 48901726 - 48901775
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||||    
T  48901726 aaatgaatgtcattttcagtttccaatgcaataataactttttcttttca 48901775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 48903292 - 48903341
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||||    
T  48903292 aaatgaatgtcattttcagtttccaatgcaataataactttttcttttca 48903341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 50646254 - 50646205
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||    
T  50646254 aaataaatgtcactttcagtttccaatgcaataataactttttcttttca 50646205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 52654310 - 52654359
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||||||    
T  52654310 aaataaatgtcactttcagttttcaatacaataataactttttcttttca 52654359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 36844881 - 36844837
Alignment:
Q  291 aatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  36844881 aatgtcactttcagttttcaatgcaataataattttttcttttca 36844837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 2458013 - 2458060
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| || |||| ||||||||||||||||||||    
T  2458013 aaatgaatgtcactttcagtttccaatacaataataactttttctttt 2458060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 30426468 - 30426421
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||    
T  30426468 aaatgaatgtcattttcagtttccaatgcaataataactttttctttt 30426421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 4758997 - 4759046
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||  || |||||||||||||||||||||||||||    
T  4758997 aaataaatgtcactttcactttccaatgcaataataactttttcttttca 4759046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 11019970 - 11019921
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||  ||||||||||||||||| ||||||||||||    
T  11019970 aaattaatgtcactttcatttttcaatgcaataataattttttcttttca 11019921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 11393551 - 11393600
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||  || |||||||||||||||||||||||||||    
T  11393551 aaatgaatgtcattttcaatttccaatgcaataataactttttcttttca 11393600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 22857096 - 22857145
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||||   |||||||| |||||||||||||||||||||    
T  22857096 aaatgaatgtcactttcgattttcaatgtaataataactttttcttttca 22857145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 33024444 - 33024395
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||||||| || |||||||||||||||||| ||||||||    
T  33024444 aaatgaatgttactttcagtttccaatgcaataataactttatcttttca 33024395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 41850396 - 41850445
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||| |||||| || || |||||||||||||||||||||||||||    
T  41850396 aaatgaatgacacttttagtttccaatgcaataataactttttcttttca 41850445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 47137969 - 47138018
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| ||| || ||||||||||||||||||||||| ||||||    
T  47137969 aaatgaatgtcatttttagttttcaatgcaataataactttttattttca 47138018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 51398016 - 51398065
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||||||| || |||||||| |||||||||||||||||||||    
T  51398016 aaataaatgtcacttttagttttcaatgtaataataactttttcttttca 51398065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 30315315 - 30315362
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||| | || |||||||| ||||||||||||||||    
T  30315315 aaatgaatgtcactttccgtttccaatgcaagaataactttttctttt 30315362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 33194175 - 33194128
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| || ||||||||| |||||||||| ||||    
T  33194175 aaatgaatgtcactttcagtttccaatgcaatgataactttttatttt 33194128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 38140956 - 38141003
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| || ||||||||||||||| |||| ||||    
T  38140956 aaatgaatgtcactttcagtttccaatgcaataataaccttttttttt 38141003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 38363791 - 38363838
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| || ||||||||||||||| |||| ||||    
T  38363791 aaatgaatgtcactttcagtttacaatgcaataataaccttttttttt 38363838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 4392202 - 4392251
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || ||||  |||||||||||||||||||||    
T  4392202 aaatgaatgtcagtttcagtttccaatttaataataactttttcttttca 4392251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 7231040 - 7230991
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || |   ||||||||||||||||||||||||||    
T  7231040 aaatgaatgtcacttttagttacgaatgcaataataactttttcttttca 7230991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 19373592 - 19373641
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||| |||||||||||  |||||||| |||||||||||||| ||||||    
T  19373592 aaatgactgtcactttcaattttcaatgaaataataactttttattttca 19373641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 23208433 - 23208387
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttc 334  Q
    ||||||||||||||||||| || |||  |||||||||||||||||||||    
T  23208433 aaatgaatgtcactttcagtttccaa--caataataactttttcttttc 23208387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 40487834 - 40487883
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||    || |||||||||||||||||||||||||||    
T  40487834 aaatgaatgtcacttttgatttccaatgcaataataactttttcttttca 40487883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 42071991 - 42072040
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||| |||||| ||| || || |||||||||||||||||||||||||||    
T  42071991 aaatggatgtcatttttagtttccaatgcaataataactttttcttttca 42072040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 42886757 - 42886806
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| ||||| |  || |||||||||||||||||||||||||||    
T  42886757 aaatgaatgttactttaaatttccaatgcaataataactttttcttttca 42886806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 50088460 - 50088411
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||| |||||||| || || |||||||||| ||||||||||||||||    
T  50088460 aaatgaacgtcacttttagtttccaatgcaatagtaactttttcttttca 50088411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 35557893 - 35557853
Alignment:
Q  295 tcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| || |||||||||||||| ||||||||||||    
T  35557893 tcactttcagtttccaatgcaataataattttttcttttca 35557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 18719579 - 18719530
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18719579 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 18719530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 441378 - 441329
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  441378 aaatgaatgtcactttctgttttcaatgcaataataactttttcttttca 441329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 16463179 - 16463130
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  16463179 aaataaatgtcactttcagttttcaatgcaataataactttttcttttca 16463130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 18579173 - 18579222
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  18579173 aaatgaatgtcactttcagttttcaatgcaataataattttttcttttca 18579222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 29808818 - 29808867
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  29808818 aaatgaatgtcactttcagttttcaatgcaatcataactttttcttttca 29808867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 43427434 - 43427385
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  43427434 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 43427385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 43971510 - 43971559
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  43971510 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 43971559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 45301771 - 45301820
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  45301771 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 45301820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 335
Target Start/End: Original strand, 16792439 - 16792538
Alignment:
Q  236 tactccatctgttttaagatgagtgttgctttagcnnnnnnnnttgtttcaaa-tgaatgtcactttcagctttcaatgcaataataactttttcttttc 334  Q
    ||||||||| ||||||| |||||||| ||||||||        |||||||||| ||||||||||||| || || ||||||||||||||||||||||||||    
T  16792439 tactccatccgttttaaaatgagtgtcgctttagcaaaaaaa-ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttc 16792537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 17703025 - 17703071
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttt 332  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  17703025 aaatgaatgtcactttcaattttcaatgcaataataactttttcttt 17703071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 4133030 - 4133079
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||    
T  4133030 aaatgaatgtcactttcggtttccaatgcaataataactttttcttttca 4133079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 4469507 - 4469556
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  4469507 aaatgaatttcactttcagttttcaatacaataataactttttcttttca 4469556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 6220551 - 6220502
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||    
T  6220551 aaatgaatgtcacttttagtttccaatgcaataataactttttcttttca 6220502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 12342099 - 12342148
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||    
T  12342099 aaatgaatgtcactttcggtttccaatgcaataataactttttcttttca 12342148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 27964517 - 27964468
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||    
T  27964517 aaatgaatgtcacttttagtttccaatgcaataataactttttcttttca 27964468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 29396827 - 29396778
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||    
T  29396827 aaatgaatgtcactttcggtttccaatgcaataataactttttcttttca 29396778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 38926612 - 38926661
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| |||||||||||||||||||| || ||||||    
T  38926612 aaatgaatgtcactttcagttttcaatgcaataataacttctttttttca 38926661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 45082046 - 45081998
Alignment:
Q  287 aatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||    
T  45082046 aatgaatgtcactttcagtttccaatgcaataataattttttcttttca 45081998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 5717519 - 5717566
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||    
T  5717519 aaatgaatgtcactttcagtttccaatgcaataataaatttttctttt 5717566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 28072573 - 28072620
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  28072573 aaatgaatgtcactttcagttttcaatacaataataactttttttttt 28072620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 29411702 - 29411749
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    |||||||||||||||| || |||||||||||||||||| |||||||||    
T  29411702 aaatgaatgtcacttttagttttcaatgcaataataaccttttctttt 29411749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 335
Target Start/End: Complemental strand, 32228212 - 32228109
Alignment:
Q  233 taatactccatctgttttaagatgagtgttgctttagcnnnnnnnnttgtttcaaa-tgaatgtcactttcagctttcaatgcaataataactttttctt 331  Q
    |||||||||||| ||||||| |||||||| | ||||||        |||||| ||| |||||||||||||  | ||| ||||||||||||||||||||||    
T  32228212 taatactccatccgttttaaaatgagtgtcgttttagcaaaataaattgttttaaaatgaatgtcacttttggttttaaatgcaataataactttttctt 32228113  T
Q  332 ttca 335  Q
    ||||    
T  32228112 ttca 32228109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 40608750 - 40608705
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttt 332  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  40608750 aaatgaatgtcactttcag-tttcaatgcaataataactttctcttt 40608705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 7644652 - 7644701
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  7644652 aaatgaatgtcactttcagtattcaatataataataactttttcttttca 7644701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 9391705 - 9391656
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| ||| ||||||||||||| ||||||||||||    
T  9391705 aaatgaatgtcattttcagtttttaatgcaataataattttttcttttca 9391656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 11188639 - 11188590
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||| |||||||| || ||||||    
T  11188639 aaatgaatgtcactttcagttttcaatgcaacaataacttatttttttca 11188590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 12566127 - 12566078
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||| ||||| ||||||    
T  12566127 aaatgaatgtcactttcagtttccaatgcaataataatttttttttttca 12566078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 13562000 - 13562049
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| ||  ||||||||||||||||||||||||||    
T  13562000 aaataaatgtcactttcagtttctaatgcaataataactttttcttttca 13562049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 14833882 - 14833837
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctt 331  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||    
T  14833882 aaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 22620481 - 22620432
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||| |||| ||||||| || |||||||||||||||||||||||||||    
T  22620481 aaatgagtgtcgctttcagtttccaatgcaataataactttttcttttca 22620432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 25383631 - 25383582
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| | |||||| || |||||||||||||||||||||||||||    
T  25383631 aaatgaatgttattttcagtttccaatgcaataataactttttcttttca 25383582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 36177982 - 36178031
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | || |||||||||||||||||||| ||||||    
T  36177982 aaatgaatgtcactttccgtttccaatgcaataataacttttttttttca 36178031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 34546478 - 34546431
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||  || |||||||||||||| ||||||||||    
T  34546478 aaatgaatgtcactttcaatttccaatgcaataataattttttctttt 34546431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 37038913 - 37038867
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||   |||||||||||||||||    
T  37038913 aaatgaatgtcactttcagttttcaatgca---ataactttttcttttca 37038867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 4051851 - 4051809
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    ||||||||||||||||||| || |||||||||||||| |||||    
T  4051851 aaatgaatgtcactttcagtttccaatgcaataataatttttt 4051809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 35799209 - 35799251
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  35799209 aaataaatgtcactttcagtttccaatgcaataataacttttt 35799251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 7028959 - 7028910
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||  || |||||||||||| ||||||||||||||    
T  7028959 aaatgaatgtcattttcactttccaatgcaataatgactttttcttttca 7028910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 14285944 - 14285993
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||| ||||||||||||||| ||||||    
T  14285944 aaatgaatgtcattttcagtttccaatacaataataacttttttttttca 14285993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 16807664 - 16807615
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||||||| || || |||||||||||||| ||||||||||||    
T  16807664 aaataaatgtcactttaagtttccaatgcaataataattttttcttttca 16807615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 16846945 - 16846896
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||||||| || || |||||||||||||| ||||||||||||    
T  16846945 aaataaatgtcactttaagtttccaatgcaataataattttttcttttca 16846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 17695972 - 17695923
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||| |||||||||||| || |||||  ||||||||||||||||||||    
T  17695972 aaatgagtgtcactttcagtttccaatgtgataataactttttcttttca 17695923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 30855111 - 30855159
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||| |||| || |||||||||||||| ||||||||||||    
T  30855111 aaatgaatgtcactctcagtttccaatgcaataataa-tttttcttttca 30855159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Original strand, 42753756 - 42753793
Alignment:
Q  291 aatgtcactttcagctttcaatgcaataataacttttt 328  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  42753756 aatgtcactttcagttttcaatgcgataataacttttt 42753793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 45423624 - 45423673
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||| ||| | |||||| || |||||||||||||||||||||||||||    
T  45423624 aaatgattgttattttcagtttccaatgcaataataactttttcttttca 45423673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 1423206 - 1423246
Alignment:
Q  295 tcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||||||| ||||||||||| |||||||||    
T  1423206 tcactttcagttttcaatggaataataacttattcttttca 1423246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 25487094 - 25487143
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25487094 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 25487143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 10842733 - 10842835
Alignment:
Q  234 aatactccatctgttttaagatgagtgttgctttagcnnnnnnnnttgtttcaaa-tgaatgtcactttcagctttcaatgcaataataactttttcttt 332  Q
    |||||||| |||||||||| |||||||| | ||||||        || ||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  10842733 aatactccttctgttttaaaatgagtgtcgttttagccaaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaataataacattttcttt 10842832  T
Q  333 tca 335  Q
    |||    
T  10842833 tca 10842835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 50249263 - 50249365
Alignment:
Q  235 atactccatctgttttaagatgagtgttgctttagcnnnnnnnntt-gtttcaaa-tgaatgtcactttcagctttcaatgcaataataactttttcttt 332  Q
    ||||||| |||||||||| |||||||| ||||||||        || |||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  50249263 atactccctctgttttaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttt 50249362  T
Q  333 tca 335  Q
    |||    
T  50249363 tca 50249365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 15823040 - 15823089
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  15823040 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 15823089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 26352226 - 26352177
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||    
T  26352226 aaatgaatgtcacttttagttttcaatgcaataataactttttcttttca 26352177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 29567902 - 29567951
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  29567902 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 29567951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 32807083 - 32807034
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  32807083 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 32807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 40717441 - 40717392
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  40717441 aaatgaatgtcactttcagttttcaatgcaataataattttttcttttca 40717392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 50094235 - 50094284
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  50094235 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 50094284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 15573613 - 15573655
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  15573613 aaatgaatgtcactttcagttttcaatgcaataataacttttt 15573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 35848075 - 35848029
Alignment:
Q  289 tgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || |||||||||||||||||||||||||||    
T  35848075 tgaatgtcactttcagtttacaatgcaataataactttttcttttca 35848029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 5463581 - 5463630
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||||||    
T  5463581 aaatgaatgtcactttcagtttccaatgcaattataactttttcttttca 5463630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 12591227 - 12591178
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||    
T  12591227 aaatgaatgtcacttttagtttccaatgcaataataactttttcttttca 12591178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 13408410 - 13408361
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  13408410 aaatgaattttactttcagttttcaatgcaataataactttttcttttca 13408361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 14593465 - 14593416
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttca 14593416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 26595214 - 26595165
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  26595214 aaatgaatgtcactttcagtttacaatgcaataataaatttttcttttca 26595165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 27720964 - 27721013
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  27720964 aaatgaatgtcactttcagttttcaatataataataactttttcttttca 27721013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 34032225 - 34032176
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  34032225 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttca 34032176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 34047380 - 34047331
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||    
T  34047380 aaatgaatgtcactttgagtttccaatgcaataataactttttcttttca 34047331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 44258652 - 44258603
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  44258652 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttca 44258603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 46045979 - 46046028
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  46045979 aaatgaatgtcactttcagttttcgatgcaataataactttttattttca 46046028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 46286959 - 46286914
Alignment:
Q  290 gaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||    
T  46286959 gaatgtcactttcatttttcaatgcaataataactttttcttttca 46286914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 1740786 - 1740737
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || ||||| |||||||||||||| ||||||    
T  1740786 aaatgaatgtcactttcagtttccaatgaaataataactttttattttca 1740737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 9915449 - 9915498
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||||||||| ||||||||||||    
T  9915449 aaatgaatgtcattttcagtttccaatgcaataataaatttttcttttca 9915498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 16757339 - 16757290
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||| ||||||||||||| || ||||||||||||||||| |||||||||    
T  16757339 aaatgtatgtcactttcagtttccaatgcaataataacttattcttttca 16757290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 25151821 - 25151870
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttcttttca 25151870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 26755226 - 26755275
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||| || |||||||||||||||||||    
T  26755226 aaatgaatgtcactttcagtttccaatacattaataactttttcttttca 26755275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 27208995 - 27209044
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | || |||||||||||||||||||| ||||||    
T  27208995 aaatgaatgtcactttcggtttccaatgcaataataactttttattttca 27209044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 31491915 - 31491866
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  ||||||||  ||||||||||||||||||||    
T  31491915 aaatgaatgtcactttcaattttcaatgtcataataactttttcttttca 31491866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 34110535 - 34110580
Alignment:
Q  288 atgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    |||||||| |||||||| || |||||||||||||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctttt 34110580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 38531442 - 38531393
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||||||||| ||||||||||||    
T  38531442 aaatgaatgtcattttcagtttccaatgcaataataattttttcttttca 38531393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 44108605 - 44108654
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| || |||| ||||||||||||||||||||||    
T  44108605 aaataaatgtcactttcagtttccaatacaataataactttttcttttca 44108654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 44557189 - 44557140
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||||||  | ||||||||||||||| |||||||||||    
T  44557189 aaatgaatgtcactttcagtctccaatgcaataataacattttcttttca 44557140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 48025399 - 48025350
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | || ||||||||||||||||||||| |||||    
T  48025399 aaatgaatgtcactttcggtttccaatgcaataataactttttcgtttca 48025350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 49468856 - 49468807
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  49468856 aaatgaatgtaactttcagtttccaatgcaataataacattttcttttca 49468807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 14373558 - 14373509
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||| ||||||||||| ||||||    
T  14373558 aaatgaatgtcattttcagtttccaatgcaacaataactttttattttca 14373509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 24483394 - 24483443
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||| ||||||||||| ||||||||||    
T  24483394 aaatgaatgtcagtttcagtttccaatacaataataactgtttcttttca 24483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 24611665 - 24611616
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || ||  |||| |||||||||||||||||||||    
T  24611665 aaatgaatgtcacttttagtttctaatgtaataataactttttcttttca 24611616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 24884421 - 24884470
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||  || |||||||||||||||||||| ||||||    
T  24884421 aaataaatgtcactttcaatttccaatgcaataataactttttattttca 24884470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 30292946 - 30292995
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||| ||||||||| || |||||||||||||||||| | ||||||    
T  30292946 aaatgaatgccactttcagtttccaatgcaataataactttgttttttca 30292995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 31798595 - 31798644
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||| ||||||||||| || | || ||||||||||||||||||||||    
T  31798595 aaatgaacgtcactttcagtttccgatacaataataactttttcttttca 31798644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 33622510 - 33622461
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| ||||   ||||||||||||||||||||| ||||||||    
T  33622510 aaatgaatgtcattttcgattttcaatgcaataataactttatcttttca 33622461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 43358353 - 43358296
Alignment:
Q  279 ttgtttcaa-atgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||| |||||| |||||||||  |||||||||||||||||| |||| ||||||    
T  43358353 ttgtttcaatatgaatatcactttcacttttcaatgcaataataacattttattttca 43358296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 46554804 - 46554853
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||| ||||| || || ||||||||||||||||| ||||||    
T  46554804 aaatgaatgtcaccttcagtttccactgcaataataactttttattttca 46554853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 48009016 - 48009065
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||| || ||| || ||| ||||||||||||||||||||||||||    
T  48009016 aaatgaatggcatttttagtttttaatgcaataataactttttcttttca 48009065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 51244973 - 51244933
Alignment:
Q  294 gtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  51244973 gtcactttca-ctttcaatacaataataactttttcttttca 51244933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 52024379 - 52024330
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||| | |||||| ||||||||||||||||| ||||||||||||    
T  52024379 aaataaatgttattttcagttttcaatgcaataataaatttttcttttca 52024330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 43759347 - 43759387
Alignment:
Q  295 tcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||| |||||||||||| ||||||||||||    
T  43759347 tcactttcagttttcgatgcaataataattttttcttttca 43759387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 49403003 - 49402967
Alignment:
Q  299 tttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||| || |||||||||||||||||||||||||||    
T  49403003 tttcagtttccaatgcaataataactttttcttttca 49402967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 56460089 - 56460136
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  56460089 aaatgaatgtcactttcagctttcaatgcaatagtaactttttctttt 56460136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 4505343 - 4505392
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  4505343 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 4505392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 19451362 - 19451313
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  19451362 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 19451313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 19878654 - 19878703
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  19878654 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 19878703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 20448045 - 20448094
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  20448045 aaatgaatgtcactttcagttttcaatgcaataataattttttcttttca 20448094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 39982109 - 39982158
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  39982109 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 39982158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 45043739 - 45043690
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  45043739 aaatgaatgtcactttcagttttcaatgcaataataattttttcttttca 45043690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 52957941 - 52957892
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  52957941 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 52957892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 1819568 - 1819617
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  1819568 aaatgaatgtcactttcagtttccaatgcaataataaatttttcttttca 1819617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 2728549 - 2728500
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||||    
T  2728549 aaatgaatgtcattttcagtttccaatgcaataataactttttcttttca 2728500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 6991412 - 6991363
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  6991412 aaatgaatgtcactttcagttttcaatacaataataattttttcttttca 6991363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 21864534 - 21864485
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||||||| || |||||||||||||||||||||||||||    
T  21864534 aaatgaatgttactttcagtttccaatgcaataataactttttcttttca 21864485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 21920395 - 21920346
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||||||| || |||||||||||||||||||||||||||    
T  21920395 aaatgaatgttactttcagtttccaatgcaataataactttttcttttca 21920346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 37624562 - 37624611
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||    
T  37624562 aaataaatgtcactttcagtttccaatgcaataataactttttcttttca 37624611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 40345498 - 40345449
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  40345498 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttca 40345449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 52915693 - 52915644
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||||    
T  52915693 aaatgaatgtcgctttcagtttccaatgcaataataactttttcttttca 52915644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 25231181 - 25231229
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttc 334  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||||    
T  25231181 aaatgaatgtcactttcaatttccaatgcaataataactttttcttttc 25231229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 50621338 - 50621290
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttc 334  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||    
T  50621338 aaataaatgtcactttaagttttcaatgcaataataactttttcttttc 50621290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 52253851 - 52253898
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||    
T  52253851 aaatgaatgtcactttcagtttccaatgcaataataacttcttctttt 52253898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 49089470 - 49089512
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  49089470 aaatgaatgtcacttttagttttcaatgcaataataacttttt 49089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 50203082 - 50203129
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||||    
T  50203082 aaatgaatgtcactttcag--tccaatgcaataataactttttcttttca 50203129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 7906147 - 7906098
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |  ||||||||||||||||||||||||    
T  7906147 aaatgaatgtcactttcagtttccggtgcaataataactttttcttttca 7906098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 10573305 - 10573256
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| ||| || || |||||||||||||||||||||||||||    
T  10573305 aaatgaatgtcatttttagtttccaatgcaataataactttttcttttca 10573256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 19930720 - 19930769
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || | |||||||||||||||||||||||||    
T  19930720 aaatgaatgtcactttcaatttccgatgcaataataactttttcttttca 19930769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 22220510 - 22220461
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||| |||||  ||||||||||||||||||||||||||||||    
T  22220510 aaataaatgtcattttcaattttcaatgcaataataactttttcttttca 22220461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 29370609 - 29370658
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| |||||||  |||||||||||||||||||||    
T  29370609 aaataaatgtcactttcagttttcaatataataataactttttcttttca 29370658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 30261265 - 30261314
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || ||||||||||||||  |||||||||||    
T  30261265 aaatgaatgtcactttcagtttccaatgcaataataatgttttcttttca 30261314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 31917962 - 31918011
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| ||||||||||||| |||||||||||||  ||||||||||||    
T  31917962 aaatgaatttcactttcagcttccaatgcaataatagttttttcttttca 31918011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 41496211 - 41496260
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||| |||||||||| ||||||| ||||||||||||||||||||||    
T  41496211 aaataaatctcactttcagttttcaatacaataataactttttcttttca 41496260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 44572016 - 44571967
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||| ||||||| || ||||||||||| |||||||||||||||    
T  44572016 aaatgaatgtcgctttcagtttccaatgcaataaaaactttttcttttca 44571967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 47817744 - 47817793
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| | |||||||| || |||||||||||||||||||||||||||    
T  47817744 aaatgaatttaactttcagtttgcaatgcaataataactttttcttttca 47817793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 49080627 - 49080579
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  49080627 aaatgaatgtcactttcagtttt-aatgcaataataactttttattttca 49080579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 52848205 - 52848156
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || |||||||||||||| ||||||||||||    
T  52848205 aaatgaatgtcactttcaatttccaatgcaataataattttttcttttca 52848156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 325
Target Start/End: Complemental strand, 27943697 - 27943658
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactt 325  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  27943697 aaatgaatgtcactttcaattttcaatgcaataataactt 27943658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 51733645 - 51733598
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| ||  ||||||||||||| ||||||||||    
T  51733645 aaatgaatgtcactttcagtttctaatgcaataataattttttctttt 51733598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 40837136 - 40837178
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    ||||||||||||||||||  || ||||||||||||||||||||    
T  40837136 aaatgaatgtcactttcattttccaatgcaataataacttttt 40837178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 2493108 - 2493157
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||| ||||||||||  || |||||||||||||| ||||||||||||    
T  2493108 aaatgaaagtcactttcattttccaatgcaataataattttttcttttca 2493157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 8971056 - 8971097
Alignment:
Q  294 gtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||| |||||||| |||||||| ||||||||||||    
T  8971056 gtcactttcagttttcaatgaaataataattttttcttttca 8971097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 24940885 - 24940934
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| ||||   || |||||||||||||||||||||||||||    
T  24940885 aaatgaatgtcattttcgatttccaatgcaataataactttttcttttca 24940934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 29519676 - 29519627
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||||||| || || |||||||||||||||||||| ||||||    
T  29519676 aaataaatgtcacttttagtttccaatgcaataataactttttattttca 29519627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 34316228 - 34316277
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||| || |||||||||||||| ||||| ||||||    
T  34316228 aaataaatgtcactttcagtttccaatgcaataataattttttattttca 34316277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Complemental strand, 38510376 - 38510347
Alignment:
Q  306 tttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||||||||||||||    
T  38510376 tttcaatgcaataataactttttcttttca 38510347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 41920460 - 41920411
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||| |||||| || ||| |||||||||||||||||||||||    
T  41920460 aaataaatgtcattttcagtttccaaagcaataataactttttcttttca 41920411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 45839643 - 45839692
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||  ||| ||||||||||||||| ||||||    
T  45839643 aaatgaatgtcactttcagtttctaatacaataataactttttattttca 45839692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Original strand, 50623109 - 50623138
Alignment:
Q  306 tttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||||||||||||||    
T  50623109 tttcaatgcaataataactttttcttttca 50623138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 54042334 - 54042285
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||| | || ||||| |||||||| ||||||||||||    
T  54042334 aaatgaatgtcactttcggtttccaatgtaataataattttttcttttca 54042285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 10046515 - 10046551
Alignment:
Q  171 tattttattaaagccctaaaatataaaagataggaga 207  Q
    |||||||||||||| |||||||||||| |||||||||    
T  10046515 tattttattaaagcactaaaatataaatgataggaga 10046551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 25123872 - 25123828
Alignment:
Q  291 aatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||| |||||| ||||||| ||||||||| ||||||||||||    
T  25123872 aatgtcattttcagttttcaatacaataataattttttcttttca 25123828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 44061015 - 44061063
Alignment:
Q  287 aatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||||  ||  ||| ||||||||||||||||||||||    
T  44061015 aatgaatgtcactttcattttctaatacaataataactttttcttttca 44061063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 24887 - 24838
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  24887 aaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 24838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 9788 - 9739
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||||    
T  9788 aaatgaatgtcattttcagtttccaatgcaataataactttttcttttca 9739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 3651 - 3602
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  3651 aaatgaatgtcactttcagtttccaatacaataataactttttcttttca 3602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 18401 - 18352
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||||    
T  18401 aaatgaatgtcattttcagtttccaatgcaataataactttttcttttca 18352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 234040 - 234089
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||    
T  234040 aaatgaatgtcacttttagtttccaatgcaataataactttttcttttca 234089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 4850642 - 4850593
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  4850642 aaatgaatgtcactttcaatttccaatgcaataataactttttcttttca 4850593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 18737237 - 18737188
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  18737237 aaatgaatgtcactttcagtttccaatgcaataataactctttcttttca 18737188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 19674986 - 19675035
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||||    
T  19674986 aaatgaatgtcattttcagtttccaatgcaataataactttttcttttca 19675035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 24163861 - 24163812
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  24163861 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttca 24163812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 29399952 - 29400001
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  29399952 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttca 29400001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 12063658 - 12063608
Alignment:
Q  285 caaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||||||| || |||||||||||||| ||||| ||||||    
T  12063658 caaatgaatgtcactttcagtttccaatgcaataataatttttttttttca 12063608  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 13503995 - 13503953
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  13503995 aaatgaatgtcactttcagtttccaatgcaataataacttttt 13503953  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 8030648 - 8030697
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| |||||||| |||||||| |||||||| ||||||||||||    
T  8030648 aaatgaatgttactttcagttttcaatgtaataataattttttcttttca 8030697  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 9940654 - 9940695
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttt 327  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  9940654 aaatgattgtcactttcagttttcaatgcaataataactttt 9940695  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 29713553 - 29713504
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||| | || |||||||||||||||||||||||||||    
T  29713553 aaatgaatgtcattttccgtttccaatgcaataataactttttcttttca 29713504  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 31233772 - 31233723
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||||| |||||||||||  |||||||||||    
T  31233772 aaatgaatgtcactttcagttttcattgcaataataatattttcttttca 31233723  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 12588532 - 12588574
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataacttttt 328  Q
    |||||||||| |||||||| || ||||||||||||||||||||    
T  12588532 aaatgaatgttactttcagtttgcaatgcaataataacttttt 12588574  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 34513739 - 34513701
Alignment:
Q  297 actttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| || |||||||||||||||||||||||||||    
T  34513739 actttcagtttccaatgcaataataactttttcttttca 34513701  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 10520786 - 10520737
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| |||||||||||||  ||||||| ||||||||| ||||||||||||    
T  10520786 aaataaatgtcactttcaattttcaatacaataataattttttcttttca 10520737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 23259472 - 23259423
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |||||| || |||||||| |||||||||| |||||||    
T  23259472 aaatgaatgtcattttcagtttccaatgcaaaaataacttttacttttca 23259423  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 24556075 - 24556026
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||| ||||||| |||||| |||||||| |||||||| ||||||||||||    
T  24556075 aaataaatgtcattttcagttttcaatgtaataataattttttcttttca 24556026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 32429294 - 32429339
Alignment:
Q  290 gaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||| |  || |||||||||||||||||||||||||||    
T  32429294 gaatgtcacttttaatttccaatgcaataataactttttcttttca 32429339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 577076 - 577116
Alignment:
Q  295 tcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| ||||||||||||||||||||| || |||||    
T  577076 tcactttcagttttcaatgcaataataactttatcatttca 577116  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 3988881 - 3988841
Alignment:
Q  295 tcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||| || |||||||||||||| ||||||||||||    
T  3988881 tcactttcagtttccaatgcaataataattttttcttttca 3988841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 660 - 614
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttt 332  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||    
T  660 aaatgaatgtcactttcagtttccaatgcaataataattttttcttt 614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 1560 - 1511
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    ||||||||||||||||||| ||  |||||||| |||||||||||||||||    
T  1560 aaatgaatgtcactttcagtttctaatgcaatgataactttttcttttca 1511  T

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Target: scaffold0502 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 718 - 671
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||| ||  || |||||||||||||||||||||||||    
T  718 aaatgaatgtcacttacaatttccaatgcaataataactttttctttt 671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 62639 - 62686
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttctttt 333  Q
    ||||||||||||||||||| || | ||| |||||||||||||||||||    
T  62639 aaatgaatgtcactttcagtttcctatgtaataataactttttctttt 62686  T

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Target: scaffold0983 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 841 - 784
Alignment:
Q  279 ttgtttca-aatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||| |||||||||||||||||| || || || |||||||| ||||||||||||    
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttcttttca 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 4571 - 4620
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||||||||||||| |  ||| ||||||||||||| ||||||||||||    
T  4571 aaatgaatgtcacttttaatttttaatgcaataataattttttcttttca 4620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 21228 - 21179
Alignment:
Q  286 aaatgaatgtcactttcagctttcaatgcaataataactttttcttttca 335  Q
    |||||| |||||||||||| ||  ||||||||||||| ||||||||||||    
T  21228 aaatgactgtcactttcagtttcaaatgcaataataattttttcttttca 21179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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