View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18243_high_121 (Length: 239)
Name: NF18243_high_121
Description: NF18243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18243_high_121 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 43592427 - 43592231
Alignment:
| Q |
19 |
cttttagctttagaggaattgttgtataaaagggaacaagtgatacattcacttacgtgtgaagttcaggcttataagcatagaatgctgagttatggct |
118 |
Q |
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| T |
43592427 |
cttttagctttagaggaattgttgtacaaaagggaacaagtgatacattcacttacgtgtgaagttcaggcttataagcatagaatgctgagttatggct |
43592328 |
T |
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| Q |
119 |
tgactgagtcagaggtagaaggtggtgattatgaatttccaccttatgagtatcctcctttgaaatgtaatgtaatgcatgtttctgcggatgctgc |
215 |
Q |
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| T |
43592327 |
tgactgagtcagaggtagaaggtggtgattatgaatttccaccttatgagtatcctcctttgaaatgtaatgtaatgcatgtttctgcggatgctgc |
43592231 |
T |
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