View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18243_high_58 (Length: 380)
Name: NF18243_high_58
Description: NF18243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18243_high_58 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 4 - 303
Target Start/End: Original strand, 31261213 - 31261513
Alignment:
| Q |
4 |
gcagatcaaaccatgctcaaatgaatttgtgatcgaagatgtgaagagtttaaaattaaggaaagtgtattttcataattcatcatacatttcgtttttg |
103 |
Q |
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| T |
31261213 |
gcagatcgaaccatgctcaaatgaatttgtgatcgaagatgtaaagagtttaaaattaaggaaagtgtattttcataattcatcatacatttcgtttttg |
31261312 |
T |
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| Q |
104 |
tatatgctaaatttaagattttgaggtgaaatatgttgagtttgattgagctgaattcgttttgattcacaaatcatcattaaattacaatcatgtagga |
203 |
Q |
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| T |
31261313 |
tatatgctaaatttaagattttgaagtgaaatatgttgagttcgattgagctgaattcgttgtgattcacaaatcatcattaaattacaatcatgtagga |
31261412 |
T |
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| Q |
204 |
tcatcgaacttgtgga--tgtgtcacaatgtctatcttctcaaacacttattatgaatgagttttataattaaatttattgaaataagaaaaagaacaat |
301 |
Q |
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|||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |
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| T |
31261413 |
tcatcgaacttgtggatgtgtgtcacaatgtctatcttctc-aacacttattgtgaatgagttttatcattaaatttattgaaataaaaaaaagaacaat |
31261511 |
T |
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| Q |
302 |
ac |
303 |
Q |
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|| |
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| T |
31261512 |
ac |
31261513 |
T |
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