View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18243_low_134 (Length: 227)
Name: NF18243_low_134
Description: NF18243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18243_low_134 |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32579166 - 32579391
Alignment:
| Q |
1 |
ttgcgtgttttttcaactgaggttggcccatatctctcaatcttgtagcctaagaatgacttaagttttgcatgtcacatgagttgttgaggagtccgcg |
100 |
Q |
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| T |
32579166 |
ttgcgtgttttttcaactgaggttggcccatatctctcaatcttgtagcctaagaatgacttaagttttgcatgtcacatgagttgttgaggagtccgcg |
32579265 |
T |
|
| Q |
101 |
gggagcgcaaggagctgcaatagggtaagcgtcttggagtacaacagattttggcgtcacatctttaattctttacccaaaaatcttaaggttatcttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| |
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| T |
32579266 |
gggagcgcaaggagctgcaatagggtaagcgtcttgaactacaacagattttgacgtcacatctttagttctttacccaaaaatcttaaggttatattct |
32579365 |
T |
|
| Q |
201 |
agtcgatgttagactaatcactcaca |
226 |
Q |
| |
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||||||||| |||||| ||||||||| |
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| T |
32579366 |
agtcgatgtgagactagtcactcaca |
32579391 |
T |
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