View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18243_low_34 (Length: 448)

Name: NF18243_low_34
Description: NF18243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18243_low_34
NF18243_low_34
[»] chr2 (33 HSPs)
chr2 (1-448)||(38355486-38355933)
chr2 (386-448)||(44860333-44860395)
chr2 (403-448)||(37411245-37411290)
chr2 (403-448)||(5367205-5367250)
chr2 (379-440)||(28524447-28524508)
chr2 (386-446)||(18889575-18889635)
chr2 (403-443)||(20242728-20242768)
chr2 (370-446)||(35056883-35056959)
chr2 (405-448)||(23718039-23718082)
chr2 (405-448)||(24105711-24105754)
chr2 (402-448)||(18276534-18276580)
chr2 (410-448)||(21616775-21616813)
chr2 (403-448)||(34691806-34691851)
chr2 (403-448)||(34714218-34714263)
chr2 (404-445)||(39279691-39279732)
chr2 (376-448)||(12668397-12668469)
chr2 (403-443)||(34784983-34785023)
chr2 (409-448)||(35449526-35449565)
chr2 (381-447)||(11223842-11223908)
chr2 (386-448)||(17776600-17776662)
chr2 (406-448)||(30527599-30527641)
chr2 (403-448)||(2331807-2331850)
chr2 (403-448)||(28677922-28677966)
chr2 (406-447)||(30471052-30471093)
chr2 (404-441)||(31808097-31808134)
chr2 (403-448)||(42832277-42832322)
chr2 (411-447)||(15909641-15909677)
chr2 (404-448)||(18420436-18420480)
chr2 (403-443)||(20922929-20922969)
chr2 (416-448)||(21782832-21782864)
chr2 (393-448)||(36409620-36409673)
chr2 (400-448)||(42418882-42418930)
chr2 (404-448)||(44605141-44605185)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-187)||(56901-57087)
[»] scaffold0123 (1 HSPs)
scaffold0123 (332-448)||(44454-44571)
[»] chr8 (30 HSPs)
chr8 (331-448)||(15816057-15816175)
chr8 (371-448)||(11927055-11927132)
chr8 (379-443)||(26902152-26902216)
chr8 (402-448)||(14134712-14134758)
chr8 (403-448)||(4786339-4786384)
chr8 (332-448)||(11803272-11803389)
chr8 (403-448)||(13844597-13844642)
chr8 (403-448)||(34897098-34897143)
chr8 (405-448)||(31236580-31236623)
chr8 (402-448)||(12606829-12606875)
chr8 (402-448)||(20679395-20679441)
chr8 (403-448)||(3025564-3025609)
chr8 (403-440)||(8847277-8847314)
chr8 (403-448)||(11944678-11944723)
chr8 (403-448)||(33405385-33405430)
chr8 (404-448)||(7658476-7658520)
chr8 (404-448)||(40332204-40332248)
chr8 (405-448)||(4611547-4611590)
chr8 (404-443)||(18964195-18964234)
chr8 (409-448)||(24362209-24362248)
chr8 (393-448)||(25566854-25566909)
chr8 (401-440)||(28384993-28385032)
chr8 (401-448)||(33382018-33382065)
chr8 (405-448)||(39954282-39954325)
chr8 (410-448)||(14731725-14731763)
chr8 (386-448)||(29447094-29447156)
chr8 (403-448)||(4948665-4948710)
chr8 (403-448)||(12985405-12985450)
chr8 (407-448)||(27213560-27213601)
chr8 (402-438)||(8293848-8293884)
[»] chr1 (54 HSPs)
chr1 (373-446)||(34371728-34371801)
chr1 (381-448)||(44482243-44482310)
chr1 (370-448)||(27471534-27471612)
chr1 (404-448)||(1864882-1864926)
chr1 (386-448)||(25361899-25361961)
chr1 (403-448)||(7918212-7918257)
chr1 (403-448)||(36878474-36878519)
chr1 (403-448)||(40181884-40181929)
chr1 (403-443)||(30749858-30749898)
chr1 (403-443)||(30771309-30771349)
chr1 (404-446)||(10233268-10233310)
chr1 (370-448)||(16164283-16164361)
chr1 (403-445)||(20157351-20157393)
chr1 (402-448)||(23636049-23636095)
chr1 (410-448)||(25098563-25098601)
chr1 (403-448)||(1486710-1486755)
chr1 (403-448)||(6427363-6427408)
chr1 (403-448)||(9629901-9629946)
chr1 (403-448)||(9709833-9709878)
chr1 (403-448)||(9828057-9828102)
chr1 (404-441)||(13997903-13997940)
chr1 (403-448)||(14332643-14332688)
chr1 (411-448)||(19324575-19324612)
chr1 (403-448)||(25272495-25272540)
chr1 (403-448)||(38503333-38503378)
chr1 (404-448)||(10572591-10572635)
chr1 (372-448)||(12713297-12713373)
chr1 (372-448)||(12717388-12717464)
chr1 (376-448)||(28273062-28273134)
chr1 (402-441)||(5898266-5898305)
chr1 (401-448)||(6415000-6415047)
chr1 (402-448)||(2784569-2784615)
chr1 (402-448)||(2896121-2896167)
chr1 (403-441)||(5944303-5944341)
chr1 (408-442)||(17705592-17705626)
chr1 (382-448)||(17754324-17754390)
chr1 (402-448)||(19562621-19562667)
chr1 (402-448)||(40258933-40258979)
chr1 (402-448)||(43492494-43492540)
chr1 (403-441)||(52903269-52903307)
chr1 (411-448)||(12443469-12443506)
chr1 (403-440)||(13436479-13436516)
chr1 (403-448)||(18337342-18337387)
chr1 (403-448)||(24577187-24577232)
chr1 (407-448)||(31015056-31015097)
chr1 (415-448)||(34298449-34298482)
chr1 (403-448)||(34712384-34712429)
chr1 (403-448)||(38075971-38076016)
chr1 (403-448)||(39953147-39953192)
chr1 (333-448)||(12611979-12612095)
chr1 (408-448)||(17831537-17831577)
chr1 (379-443)||(25934634-25934698)
chr1 (381-441)||(31694689-31694749)
chr1 (381-441)||(47989517-47989577)
[»] chr6 (45 HSPs)
chr6 (331-448)||(16766710-16766828)
chr6 (403-448)||(7265594-7265639)
chr6 (403-448)||(9025495-9025540)
chr6 (401-448)||(19044477-19044524)
chr6 (402-448)||(13360372-13360418)
chr6 (403-448)||(7377992-7378037)
chr6 (403-448)||(9617447-9617492)
chr6 (403-448)||(9629396-9629441)
chr6 (403-448)||(19040365-19040410)
chr6 (403-448)||(20371111-20371156)
chr6 (403-448)||(26562702-26562747)
chr6 (404-448)||(7086808-7086852)
chr6 (408-448)||(11591876-11591916)
chr6 (403-441)||(7027262-7027300)
chr6 (403-448)||(5732511-5732556)
chr6 (403-448)||(7996379-7996424)
chr6 (403-448)||(8022377-8022422)
chr6 (403-448)||(9027191-9027236)
chr6 (403-448)||(9195755-9195800)
chr6 (403-448)||(14155240-14155285)
chr6 (403-448)||(21924936-21924981)
chr6 (407-448)||(30866149-30866190)
chr6 (403-448)||(34073348-34073393)
chr6 (404-448)||(9658892-9658936)
chr6 (400-448)||(11784214-11784262)
chr6 (404-448)||(13364707-13364751)
chr6 (379-443)||(16488567-16488631)
chr6 (382-445)||(7248374-7248437)
chr6 (386-448)||(10294120-10294182)
chr6 (367-448)||(10339090-10339172)
chr6 (410-448)||(10888982-10889020)
chr6 (403-448)||(31579228-31579271)
chr6 (403-448)||(7151425-7151470)
chr6 (403-448)||(8931603-8931648)
chr6 (383-448)||(9107351-9107416)
chr6 (403-448)||(10770675-10770720)
chr6 (403-448)||(13851749-13851794)
chr6 (403-448)||(32320670-32320715)
chr6 (403-448)||(32511667-32511712)
chr6 (403-448)||(33001290-33001335)
chr6 (403-448)||(34595147-34595192)
chr6 (403-447)||(17327656-17327700)
chr6 (403-443)||(18367854-18367894)
chr6 (404-448)||(26178683-26178727)
chr6 (404-448)||(32299288-32299332)
[»] chr7 (46 HSPs)
chr7 (379-448)||(6630889-6630958)
chr7 (403-448)||(22602711-22602756)
chr7 (381-448)||(32308133-32308200)
chr7 (370-448)||(24339655-24339733)
chr7 (402-447)||(5835261-5835306)
chr7 (403-448)||(9482947-9482992)
chr7 (403-448)||(20549804-20549849)
chr7 (393-448)||(3520333-3520388)
chr7 (393-448)||(19206063-19206118)
chr7 (402-440)||(640134-640172)
chr7 (403-448)||(3721106-3721151)
chr7 (403-448)||(5548689-5548734)
chr7 (403-448)||(7328692-7328737)
chr7 (403-448)||(16341509-16341554)
chr7 (403-448)||(17307906-17307951)
chr7 (403-448)||(19992014-19992059)
chr7 (403-448)||(49107834-49107878)
chr7 (404-448)||(15902835-15902879)
chr7 (404-448)||(17851444-17851488)
chr7 (403-443)||(18213034-18213074)
chr7 (409-445)||(22868058-22868094)
chr7 (388-448)||(38134392-38134452)
chr7 (403-443)||(39138462-39138502)
chr7 (370-448)||(11665408-11665486)
chr7 (406-448)||(27732243-27732285)
chr7 (387-448)||(29787356-29787415)
chr7 (403-445)||(32287464-32287506)
chr7 (403-448)||(1401038-1401083)
chr7 (403-448)||(1433467-1433512)
chr7 (407-448)||(21140987-21141028)
chr7 (403-448)||(21880165-21880210)
chr7 (403-448)||(24146829-24146874)
chr7 (407-448)||(26329387-26329428)
chr7 (403-448)||(26733317-26733362)
chr7 (403-448)||(27945054-27945099)
chr7 (403-448)||(35297673-35297718)
chr7 (416-448)||(2424627-2424659)
chr7 (404-448)||(5233642-5233686)
chr7 (408-448)||(12278848-12278888)
chr7 (408-448)||(18233604-18233644)
chr7 (393-441)||(21560523-21560571)
chr7 (404-448)||(23128663-23128707)
chr7 (404-448)||(23849460-23849504)
chr7 (404-448)||(27093415-27093459)
chr7 (404-448)||(27184842-27184886)
chr7 (393-448)||(30731050-30731103)
[»] chr5 (32 HSPs)
chr5 (371-448)||(3966516-3966593)
chr5 (403-448)||(6471890-6471935)
chr5 (403-448)||(28588675-28588720)
chr5 (403-448)||(30502389-30502434)
chr5 (403-448)||(30542732-30542777)
chr5 (403-448)||(41091258-41091303)
chr5 (401-448)||(14873530-14873577)
chr5 (403-448)||(16203796-16203841)
chr5 (407-448)||(18421846-18421887)
chr5 (411-448)||(24273039-24273076)
chr5 (411-448)||(24389138-24389175)
chr5 (403-448)||(36838556-36838601)
chr5 (332-448)||(39698554-39698671)
chr5 (406-443)||(39758290-39758327)
chr5 (379-443)||(18592091-18592155)
chr5 (379-443)||(21814279-21814343)
chr5 (408-448)||(23015995-23016035)
chr5 (373-448)||(11685952-11686026)
chr5 (393-448)||(12264820-12264875)
chr5 (403-441)||(2436942-2436980)
chr5 (403-448)||(6247635-6247680)
chr5 (403-448)||(17925173-17925218)
chr5 (403-448)||(21191057-21191102)
chr5 (403-448)||(22423813-22423858)
chr5 (403-448)||(26312782-26312827)
chr5 (403-448)||(34879363-34879408)
chr5 (408-448)||(5467984-5468024)
chr5 (403-443)||(6401516-6401556)
chr5 (404-448)||(23012410-23012454)
chr5 (404-448)||(23220996-23221040)
chr5 (403-443)||(32426870-32426910)
chr5 (403-443)||(42029770-42029810)
[»] chr4 (29 HSPs)
chr4 (367-448)||(903935-904016)
chr4 (366-447)||(38148689-38148770)
chr4 (401-448)||(5775357-5775404)
chr4 (333-448)||(30982808-30982924)
chr4 (407-447)||(40613464-40613504)
chr4 (405-448)||(16189722-16189765)
chr4 (401-448)||(18576036-18576083)
chr4 (402-448)||(9996853-9996899)
chr4 (332-441)||(22234819-22234929)
chr4 (410-448)||(36635337-36635375)
chr4 (403-445)||(46160912-46160954)
chr4 (403-448)||(8423719-8423764)
chr4 (411-448)||(22440609-22440646)
chr4 (382-443)||(44132624-44132685)
chr4 (403-448)||(54580024-54580069)
chr4 (403-447)||(40179637-40179681)
chr4 (403-446)||(10499271-10499314)
chr4 (402-448)||(7214522-7214568)
chr4 (402-448)||(30103357-30103402)
chr4 (402-448)||(33950149-33950195)
chr4 (402-447)||(8402742-8402787)
chr4 (403-448)||(13134463-13134508)
chr4 (403-448)||(15029778-15029823)
chr4 (403-448)||(15659761-15659806)
chr4 (379-448)||(24613678-24613747)
chr4 (404-448)||(7012079-7012123)
chr4 (408-448)||(24343520-24343560)
chr4 (404-448)||(29205457-29205501)
chr4 (393-448)||(35723375-35723431)
[»] scaffold0036 (1 HSPs)
scaffold0036 (393-448)||(9738-9793)
[»] scaffold0003 (1 HSPs)
scaffold0003 (332-441)||(241614-241724)
[»] scaffold0020 (1 HSPs)
scaffold0020 (403-448)||(135313-135358)
[»] chr3 (43 HSPs)
chr3 (403-448)||(7928463-7928508)
chr3 (403-448)||(8789551-8789596)
chr3 (403-448)||(25093515-25093560)
chr3 (408-448)||(11658828-11658868)
chr3 (370-448)||(15796262-15796340)
chr3 (402-448)||(20691332-20691378)
chr3 (403-441)||(40993336-40993374)
chr3 (403-448)||(8039836-8039881)
chr3 (403-448)||(8383270-8383315)
chr3 (379-448)||(11665957-11666026)
chr3 (403-448)||(49505155-49505200)
chr3 (403-443)||(35222956-35222996)
chr3 (406-445)||(10690266-10690305)
chr3 (402-448)||(11251991-11252035)
chr3 (409-448)||(32804547-32804586)
chr3 (370-448)||(4987259-4987337)
chr3 (410-448)||(11313808-11313846)
chr3 (402-448)||(13807182-13807228)
chr3 (379-448)||(15812800-15812867)
chr3 (410-448)||(16192758-16192796)
chr3 (403-441)||(38731238-38731276)
chr3 (403-448)||(6780420-6780465)
chr3 (403-448)||(7614416-7614461)
chr3 (403-448)||(15314877-15314922)
chr3 (379-448)||(17005596-17005665)
chr3 (403-448)||(25948888-25948933)
chr3 (403-448)||(28918014-28918059)
chr3 (387-448)||(34910330-34910391)
chr3 (332-448)||(41961579-41961696)
chr3 (403-448)||(45451566-45451611)
chr3 (402-447)||(48202269-48202314)
chr3 (412-448)||(1438817-1438853)
chr3 (403-443)||(2941576-2941616)
chr3 (404-448)||(3962795-3962839)
chr3 (413-445)||(11493372-11493404)
chr3 (406-442)||(11507479-11507515)
chr3 (412-448)||(12704020-12704056)
chr3 (403-443)||(13414487-13414527)
chr3 (403-443)||(13845526-13845566)
chr3 (403-443)||(14028025-14028065)
chr3 (408-448)||(29508457-29508497)
chr3 (408-448)||(34307786-34307826)
chr3 (392-448)||(39002045-39002101)
[»] scaffold0044 (1 HSPs)
scaffold0044 (405-448)||(53193-53236)
[»] scaffold0623 (1 HSPs)
scaffold0623 (379-443)||(5973-6037)
[»] scaffold1528 (1 HSPs)
scaffold1528 (382-448)||(1048-1114)
[»] scaffold0279 (1 HSPs)
scaffold0279 (367-425)||(17845-17903)
[»] scaffold0171 (1 HSPs)
scaffold0171 (403-441)||(23440-23478)
[»] scaffold0022 (1 HSPs)
scaffold0022 (402-448)||(90856-90902)
[»] scaffold0316 (1 HSPs)
scaffold0316 (370-415)||(16180-16225)
[»] scaffold0236 (1 HSPs)
scaffold0236 (403-444)||(25769-25810)
[»] scaffold0050 (1 HSPs)
scaffold0050 (403-448)||(70291-70336)
[»] scaffold0008 (1 HSPs)
scaffold0008 (403-448)||(263373-263418)
[»] scaffold0376 (1 HSPs)
scaffold0376 (380-448)||(6325-6393)
[»] scaffold0136 (1 HSPs)
scaffold0136 (381-441)||(3828-3888)
[»] scaffold0110 (1 HSPs)
scaffold0110 (404-448)||(28863-28907)
[»] scaffold0085 (1 HSPs)
scaffold0085 (408-448)||(26406-26446)


Alignment Details
Target: chr2 (Bit Score: 432; Significance: 0; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 1 - 448
Target Start/End: Original strand, 38355486 - 38355933
Alignment:
Q  1 cagaaatctgtaacagtaacaacgacagaaggacttccaatcaagcaccataaaatgtgatcaacacatctaatctcataacaggcaccacaagtactcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38355486 cagaaatctgtaacagtaacaacgacagaaggacttccaatcaagcaccataaaatgtgatcaacacatctaatctcataacaggcaccacaagtactcc 38355585  T
Q  101 ctttgttgaacaaaattgtgcttaacccagtactatatttcccataatcaaccttgtgaatgtctccataaccacaagctccttctgtaatcaattcaca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38355586 ctttgttgaacaaaattgtgcttaacccagtactatatttcccataatcaaccttgtgaatgtctccataaccacaagctccttctgtaatcaattcaca 38355685  T
Q  201 accacattgtcaaaactaaaactggtgagtcccggaacccaacttacttaaacttttgtgcaaaaatattaggccagatggacaaacccatagcccgtaa 300  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38355686 accacattgtcaaaactaaaactggagagtcccggaacccaacttacttaaacttttgtgcaaaaatattaggccagatggacaaacccatagcccgtaa 38355785  T
Q  301 ttttacatggactagttgtaaaacacaagcgctatgaagcacggacacttttcggattaaccatctccagtgttggatacgtgttgtgtccaacaccaat 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  38355786 ttttacatggactagttgtaaaacacaagcgctatgaagcacggacacttttcggattaaccgtctccagtgttggacacgtgttgtatccaacaccaat 38355885  T
Q  401 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38355886 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 44860395 - 44860333
Alignment:
Q  386 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||||| |||||||||||||    
T  44860395 gtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaat 44860333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 37411245 - 37411290
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  37411245 gacatcgacacatataatcacactgaattatgtgattttctcaaat 37411290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 5367250 - 5367205
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||    
T  5367250 gacaccgacacatataattacactgaattatgtgatttcctcaaat 5367205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 440
Target Start/End: Complemental strand, 28524508 - 28524447
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattt 440  Q
    ||||||||||||| ||||||| |  ||| ||||||||||||| |||||||||||||||||||    
T  28524508 acgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 446
Target Start/End: Original strand, 18889575 - 18889635
Alignment:
Q  386 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaa 446  Q
    |||||| |||| || | ||||||||||||||| || |||||||||||||||||||||||||    
T  18889575 gtgtccgacacaaacaagacaccgacacatatgattacactgaattatgtgattttctcaa 18889635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 20242728 - 20242768
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  20242728 gacaccgacacatataattacactgaattatgtgattttct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 446
Target Start/End: Complemental strand, 35056959 - 35056883
Alignment:
Q  370 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaa 446  Q
    |||| ||| |||||| |||||| ||||| | | |||||||||||||||||| |||||||||||| || |||||||||    
T  35056959 gtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 23718082 - 23718039
Alignment:
Q  405 caccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaat 23718039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 24105754 - 24105711
Alignment:
Q  405 caccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaat 24105711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 18276580 - 18276534
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  18276580 tgacaccgacacacataattacactgaattaagtgattttctcaaat 18276534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 448
Target Start/End: Complemental strand, 21616813 - 21616775
Alignment:
Q  410 acacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaat 21616775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 34691806 - 34691851
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  34691806 gacaccgacacatataattacactgaattatatgattttatcaaat 34691851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 34714218 - 34714263
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  34714218 gacaccgacacatataattacactgaattatatgattttatcaaat 34714263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 404 - 445
Target Start/End: Complemental strand, 39279732 - 39279691
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctca 445  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctca 39279691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 448
Target Start/End: Original strand, 12668397 - 12668469
Alignment:
Q  376 gatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| || ||||| ||| | | ||||||||||| |||||| |||||||||||||| ||||| ||||||    
T  12668397 gatacgtgtcgtatccaataccgacacgacaccgacacttataattacactgaattatgtcattttttcaaat 12668469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 34784983 - 34785023
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  34784983 gacaccgacacatataattacactaaattatgtgattttct 34785023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 448
Target Start/End: Complemental strand, 35449565 - 35449526
Alignment:
Q  409 gacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaat 35449526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 447
Target Start/End: Original strand, 11223842 - 11223908
Alignment:
Q  381 gtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaa 447  Q
    |||| |||||| ||||| | ||||||||||||| | |||| |||||||||||||| ||||| |||||    
T  11223842 gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttttcaaa 11223908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 17776662 - 17776600
Alignment:
Q  386 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||| |  |||||| |||||||||||| ||||||| ||||||| |||||| ||||    
T  17776662 gtgtccaacaccgacttgacactgacacatataattacactgacttatgtggttttcttaaat 17776600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 30527599 - 30527641
Alignment:
Q  406 accgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||    
T  30527599 accgacacatataattacactaaattatatgattttctcaaat 30527641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 2331850 - 2331807
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||    
T  2331850 gacaccgacacata-aat-acactgaattatgtgattttctcaaat 2331807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 28677966 - 28677922
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||    
T  28677966 gacaccga-acatataattacactgaattatgtgattttttcaaat 28677922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 30471093 - 30471052
Alignment:
Q  406 accgacacatataatcacactgaattatgtgattttctcaaa 447  Q
    ||||||||||||||| |||  |||||||||||||||||||||    
T  30471093 accgacacatataattacatcgaattatgtgattttctcaaa 30471052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Complemental strand, 31808134 - 31808097
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgatttt 441  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  31808134 acactgacacatataattacactgaattatgtgatttt 31808097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 42832277 - 42832322
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||| |||||||| ||||| ||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaat 42832322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 15909641 - 15909677
Alignment:
Q  411 cacatataatcacactgaattatgtgattttctcaaa 447  Q
    |||||||||| |||||||||||||| |||||||||||    
T  15909641 cacatataattacactgaattatgtaattttctcaaa 15909677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 18420436 - 18420480
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| ||||||  || |||||||||||||||||||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaat 18420480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 20922929 - 20922969
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    ||||| |||||||||||| ||||| ||||||||||||||||    
T  20922929 gacacagacacatataattacactaaattatgtgattttct 20922969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 448
Target Start/End: Original strand, 21782832 - 21782864
Alignment:
Q  416 ataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| |||||||||||||||||||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaat 21782864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 36409620 - 36409673
Alignment:
Q  393 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| ||||||||||||||||  || ||||| |||||||||||||| ||||||    
T  36409620 acaccaacatgacaccgacacata--attacactaaattatgtgattttttcaaat 36409673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 42418930 - 42418882
Alignment:
Q  400 tatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||| || |||||| |||||||||||| ||||| ||||||    
T  42418930 tatgacaccgacagatgtaatcatactgaattatgtcattttttcaaat 42418882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 44605141 - 44605185
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||| |||| ||| |||||||||| ||||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaat 44605185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 57087 - 56901
Alignment:
Q  1 cagaaatctgtaacagtaacaacgacagaaggacttccaatcaagcaccataaaatgtgatcaacacatctaatctcataacaggcaccacaagtactcc 100  Q
    |||||||| ||  |||||||||  |||||||||||||||| ||  ||||| || || || ||||||||||| |||||||| || || ||||| |||||||    
T  57087 cagaaatcagtggcagtaacaataacagaaggacttccaagcatacaccacaagatatggtcaacacatctgatctcatagcaagccccacatgtactcc 56988  T
Q  101 ctttgttgaacaaaattgtgcttaacccagtactatatttcccataatcaaccttgtgaatgtctccataaccacaagctccttctg 187  Q
    || |||||||||||||||||||||| |||  ||||| ||| |||||   | | |||||||  |||||||||||||||||||||||||    
T  56987 ctctgttgaacaaaattgtgcttaatccaacactatgttttccatagctagctttgtgaagatctccataaccacaagctccttctg 56901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 448
Target Start/End: Original strand, 44454 - 44571
Alignment:
Q  332 ctatgaagcacggacacttttcggattaaccatctcc-agtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 430  Q
    ||||||||||| ||||||| || |||||||||| ||| ||||| ||| ||||||||||||||||||| | | || ||||||||||||||| |||||||||    
T  44454 ctatgaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaat 44553  T
Q  431 tatgtgattttctcaaat 448  Q
    ||||||||||||||||||    
T  44554 tatgtgattttctcaaat 44571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 448
Target Start/End: Original strand, 15816057 - 15816175
Alignment:
Q  331 gctatgaagcacggacacttttcggattaaccatctccag-tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaa 429  Q
    |||||||||||||||||||| ||||||||  | | ||| | ||| |||| ||||| |||||| ||||||| | ||||||||||| |||||| ||||| ||    
T  15816057 gctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaa 15816156  T
Q  430 ttatgtgattttctcaaat 448  Q
    |||||||||||| ||||||    
T  15816157 ttatgtgattttttcaaat 15816175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 448
Target Start/End: Original strand, 11927055 - 11927132
Alignment:
Q  371 tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| ||| ||||   ||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||    
T  11927055 tgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaat 11927132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 379 - 443
Target Start/End: Original strand, 26902152 - 26902216
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||| |||||| ||||  ||| |||||||||||||||||| ||||||||||||||||||||||    
T  26902152 acgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaattatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 14134758 - 14134712
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  14134758 tgacaccgacatatataattacactgaattatgtgattttctcaaat 14134712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 4786339 - 4786384
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||    
T  4786339 gacaccgacacatataattacactgaattatgtgattttcttaaat 4786384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 448
Target Start/End: Complemental strand, 11803389 - 11803272
Alignment:
Q  332 ctatgaagcacggacacttttcggattaaccatct-ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 430  Q
    ||||||||||||||||||  ||||||||  | | | || |||| ||| | |||| || ||||||||||| |  ||||| ||||||||||| |||||||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaat 11803290  T
Q  431 tatgtgattttctcaaat 448  Q
    ||||||||||||| ||||    
T  11803289 tatgtgattttcttaaat 11803272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 13844597 - 13844642
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  13844597 gacaccgacacatataattacactcaattatgtgattttctcaaat 13844642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 34897143 - 34897098
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  34897143 gacatcgacacatataattacactgaattatgtgattttctcaaat 34897098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 405 - 448
Target Start/End: Original strand, 31236580 - 31236623
Alignment:
Q  405 caccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||| ||| |||||||||||||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaat 31236623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 12606829 - 12606875
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  12606829 tgacaccgacacatataattacattgaattatatgattttctcaaat 12606875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 20679395 - 20679441
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||    
T  20679395 tgacaccgacacttataattacactgaactatgtgattttctcaaat 20679441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 3025609 - 3025564
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||||    
T  3025609 gacactgacacctataattacactgaattatgtgattttctcaaat 3025564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 8847314 - 8847277
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattt 440  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8847314 gacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 11944723 - 11944678
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||||    
T  11944723 gacaccgacacatataattacactgagttatgtgattttatcaaat 11944678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 33405385 - 33405430
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||    
T  33405385 gacaccgacacatataattacactaaattatgtgtttttctcaaat 33405430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 7658520 - 7658476
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaat 7658476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 40332248 - 40332204
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| | |||| |||||||||||||||||||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaat 40332204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 4611590 - 4611547
Alignment:
Q  405 caccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||    
T  4611590 caccgagacatataattacactgaattatgttattttctcaaat 4611547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Complemental strand, 18964234 - 18964195
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttct 443  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  18964234 acaccgacacatataattacattgaattatgtgattttct 18964195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 448
Target Start/End: Original strand, 24362209 - 24362248
Alignment:
Q  409 gacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaat 24362248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 25566909 - 25566854
Alignment:
Q  393 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| | ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  25566909 acaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaat 25566854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 440
Target Start/End: Original strand, 28384993 - 28385032
Alignment:
Q  401 atgacaccgacacatataatcacactgaattatgtgattt 440  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  28384993 atgacaccgacacatataattacactgaattatgagattt 28385032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 33382018 - 33382065
Alignment:
Q  401 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||||| || ||||||||||| ||||||| ||||    
T  33382018 atgacaccgacacatataattactctgaattatgtcattttcttaaat 33382065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Original strand, 39954282 - 39954325
Alignment:
Q  405 caccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||    
T  39954282 caccgtcacatataattacactaaattatgtgattttctcaaat 39954325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 448
Target Start/End: Complemental strand, 14731763 - 14731725
Alignment:
Q  410 acacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaat 14731725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 29447094 - 29447156
Alignment:
Q  386 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||| | ||||||||||||| | || | ||| |||||||||||||||||||||||    
T  29447094 gtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaat 29447156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 4948710 - 4948665
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  4948710 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 4948665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 12985450 - 12985405
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| |||| || ||| |||||||||||||||||||||||    
T  12985450 gacaccgacatatatgattacattgaattatgtgattttctcaaat 12985405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 27213601 - 27213560
Alignment:
Q  407 ccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| ||| |||||||||||||||||| ||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaat 27213560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 8293884 - 8293848
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgat 438  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  8293884 tgacaccgacacatataattacactgaattacgtgat 8293848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 373 - 446
Target Start/End: Complemental strand, 34371801 - 34371728
Alignment:
Q  373 ttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaa 446  Q
    ||||| |||||| || ||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  34371801 ttggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 381 - 448
Target Start/End: Complemental strand, 44482310 - 44482243
Alignment:
Q  381 gtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| |||||| ||||| | | |||||||||||||||||| |||||||||||||||||||||||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaat 44482243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 448
Target Start/End: Original strand, 27471534 - 27471612
Alignment:
Q  370 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| ||| |||||| || ||||||||| |||||||||| |||||| |||| ||||||||||||||| |||||||||||    
T  27471534 gtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaat 27471612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 1864882 - 1864926
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaat 1864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 25361961 - 25361899
Alignment:
Q  386 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||| | | ||||| |||||||||||| |||||||||||||||||||||||||||    
T  25361961 gtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaat 25361899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 7918212 - 7918257
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  7918212 gacactgacacatataattacactgaattatgtgattttctcaaat 7918257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 36878519 - 36878474
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaat 36878474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 40181929 - 40181884
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  40181929 gacaccgatacatataattacactgaattatgtgattttctcaaat 40181884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 30749898 - 30749858
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  30749898 gacaccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 30771349 - 30771309
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  30771349 gacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 446
Target Start/End: Complemental strand, 10233310 - 10233268
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaa 446  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaa 10233268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 448
Target Start/End: Original strand, 16164283 - 16164361
Alignment:
Q  370 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| ||| |||||||| |||||||||||| | ||||  |||||||||||| ||| | |||||||||||||| ||||||    
T  16164283 gtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgattttttcaaat 16164361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 445
Target Start/End: Original strand, 20157351 - 20157393
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctca 445  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  20157351 gacaccgacacatatgattacactgaattatgtgattttctca 20157393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 23636049 - 23636095
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  23636049 tgacaccgacacatacaattacactgaattatgtaattttctcaaat 23636095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 448
Target Start/End: Original strand, 25098563 - 25098601
Alignment:
Q  410 acacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaat 25098601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 1486710 - 1486755
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||||    
T  1486710 gacaccgacacttataattacactgaattatgtgattttttcaaat 1486755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 6427408 - 6427363
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||||    
T  6427408 gacaccaacacatataattacattgaattatgtgattttctcaaat 6427363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 9629901 - 9629946
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  9629901 gacaccgacacttataatcacactgaattatatgattttatcaaat 9629946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 9709878 - 9709833
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||    
T  9709878 gacaccgacacatataattacaacgaattatgtgattttctcaaat 9709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 9828102 - 9828057
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||    
T  9828102 gacaccgacacataaaattacactgaattatgtgattttatcaaat 9828057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 404 - 441
Target Start/End: Complemental strand, 13997940 - 13997903
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgatttt 441  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttt 13997903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 14332643 - 14332688
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||    
T  14332643 gacaccgagacatataattacactaaattatgtgattttctcaaat 14332688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 19324612 - 19324575
Alignment:
Q  411 cacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| |||||||||||||||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaat 19324575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 25272540 - 25272495
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  25272540 gacaccgacacttataattacactaaattatgtgattttctcaaat 25272495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 38503378 - 38503333
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaat 38503333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 10572591 - 10572635
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaat 10572635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 448
Target Start/End: Original strand, 12713297 - 12713373
Alignment:
Q  372 gttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| | ||||| | || ||||| | ||||||||| ||||| |||||||||||||||| ||||    
T  12713297 gttggacacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaat 12713373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 448
Target Start/End: Original strand, 12717388 - 12717464
Alignment:
Q  372 gttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| | ||||| | || ||||| | ||||||||| ||||| |||||||||||||||| ||||    
T  12717388 gttggacacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaat 12717464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 448
Target Start/End: Original strand, 28273062 - 28273134
Alignment:
Q  376 gatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| |||||| ||| | ||| ||||||||||| | |||| |||||||||||| ||||||| ||||||    
T  28273062 gatacgtgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaat 28273134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 441
Target Start/End: Original strand, 5898266 - 5898305
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgatttt 441  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  5898266 tgacaccgacgcatataattacactgaattatgtgatttt 5898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 6415000 - 6415047
Alignment:
Q  401 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||| |||| | |||| ||||||||||||||||||||    
T  6415000 atgacaccgacacatctaattaaactgtattatgtgattttctcaaat 6415047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 2784615 - 2784569
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||||| | ||| |||||||||||||||| ||||    
T  2784615 tgacaccgacacatataattatactcaattatgtgattttcttaaat 2784569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 2896121 - 2896167
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||   |||||||||||||||||||||||||||    
T  2896121 tgacaccgacatatatagctacactgaattatgtgattttctcaaat 2896167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 441
Target Start/End: Complemental strand, 5944341 - 5944303
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgatttt 441  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  5944341 gacaccgacacttataattacactgaattatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 442
Target Start/End: Original strand, 17705592 - 17705626
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttc 442  Q
    ||||||||||||| |||||||||||||||||||||    
T  17705592 cgacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 17754390 - 17754324
Alignment:
Q  382 tgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||| | |  |||| |||||||||| | |||||||||||||| ||||| ||||||    
T  17754390 tgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaat 17754324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 19562621 - 19562667
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||||    
T  19562621 tgacacctacacatataattacactgaactatgagattttctcaaat 19562667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 40258933 - 40258979
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||| | |||| |||||||||||||||||||| ||||||    
T  40258933 tgacaccgacacttgtaattacactgaattatgtgattttttcaaat 40258979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 43492494 - 43492540
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||| ||||| |||| |||||| |||||||||||||||    
T  43492494 tgacaccgacacacataattacaccgaattacgtgattttctcaaat 43492540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 441
Target Start/End: Complemental strand, 52903307 - 52903269
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgatttt 441  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  52903307 gacaccgacacatataattacactgaattatatgatttt 52903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Original strand, 12443469 - 12443506
Alignment:
Q  411 cacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaat 12443506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 13436516 - 13436479
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattt 440  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  13436516 gacaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 18337387 - 18337342
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  18337387 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 18337342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 24577187 - 24577232
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  24577187 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 24577232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 31015097 - 31015056
Alignment:
Q  407 ccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| | |||| |||||||||||||||||||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaat 31015056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 34298482 - 34298449
Alignment:
Q  415 tataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||||||||||||||||||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaat 34298449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 34712384 - 34712429
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| |||||||||||| ||||| |||||||| ||||||||||||    
T  34712384 gacactgacacatataattacactaaattatgttattttctcaaat 34712429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 38075971 - 38076016
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||| || ||||||| ||||||||||| |||||||    
T  38075971 gacaccgacacatatgattacactgacttatgtgatttactcaaat 38076016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 39953147 - 39953192
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| ||| ||||| |||||||||||||||| ||||    
T  39953147 gacaccgacacatacaattacactaaattatgtgattttctaaaat 39953192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 12612095 - 12611979
Alignment:
Q  333 tatgaagcacggacacttttcggattaaccatct-ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaatt 431  Q
    ||||||||||||| ||| || ||||||| ||| | || || | ||| ||| || ||||| |||||||| | || || ||||||||| || ||||| ||||    
T  12612095 tatgaagcacggatactctttggattaagcatgttccggtatcggacacgcgtcgtgtctaacaccaacacgatactgacacatatgattacactcaatt 12611996  T
Q  432 atgtgattttctcaaat 448  Q
    |||||||||| ||||||    
T  12611995 atgtgattttttcaaat 12611979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 17831537 - 17831577
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| || ||||||||| |||||||||||||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaat 17831577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 443
Target Start/End: Complemental strand, 25934698 - 25934634
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||| |||||| ||||| | | || ||||||||||||||| |||||| ||| |||||||||||    
T  25934698 acgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattttgtgattttct 25934634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 31694689 - 31694749
Alignment:
Q  381 gtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgatttt 441  Q
    ||||||||||| ||||| | | ||||||||||| | |||| | ||||||||||||||||||    
T  31694689 gtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt 31694749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 47989577 - 47989517
Alignment:
Q  381 gtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgatttt 441  Q
    |||| |||||| ||||| | | ||||||||||| | |||| ||||||||||||||||||||    
T  47989577 gtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttt 47989517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 448
Target Start/End: Complemental strand, 16766828 - 16766710
Alignment:
Q  331 gctatgaagcacggacacttttcggattaaccatctccag-tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaa 429  Q
    ||||||||||||||||| | |||||||||  | | ||| | ||| ||| ||||||||||||| ||||| | | ||||||||||| | |||| ||||||||    
T  16766828 gctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaa 16766729  T
Q  430 ttatgtgattttctcaaat 448  Q
    |||||||||||| ||||||    
T  16766728 ttatgtgattttttcaaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 7265594 - 7265639
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  7265594 gacaccgacacatataattacactgaattatgtgattttctcaaat 7265639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 9025495 - 9025540
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattttctcaaat 9025540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 448
Target Start/End: Complemental strand, 19044524 - 19044477
Alignment:
Q  401 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  19044524 atgacaccgacacatataataacactgaattatgtgatattctcaaat 19044477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 13360372 - 13360418
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  13360372 tgacaccgaaacatataattacactgaattatgtgattttctcaaat 13360418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 7378037 - 7377992
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  7378037 gacaccgacacatataattacattgaattatgtgattttctcaaat 7377992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 9617492 - 9617447
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttctcaaat 9617447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 9629441 - 9629396
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttctcaaat 9629396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 19040410 - 19040365
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  19040410 gacacagacacatataattacactgaattatgtgattttctcaaat 19040365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 20371111 - 20371156
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  20371111 gacaccgacacatataatcacattgagttatgtgattttctcaaat 20371156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 26562747 - 26562702
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  26562747 gacatcgacacatataattacactgaattatgtgattttctcaaat 26562702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 7086852 - 7086808
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaat 7086808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 11591876 - 11591916
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaat 11591916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 441
Target Start/End: Complemental strand, 7027300 - 7027262
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgatttt 441  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  7027300 gacaccgacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 5732511 - 5732556
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||    
T  5732511 gacaccgacacatataattacactaaaatatgtgattttctcaaat 5732556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 7996379 - 7996424
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||    
T  7996379 gacaccgacgcatataattacactgaattatatgattttctcaaat 7996424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 8022422 - 8022377
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||    
T  8022422 gacaccgacgcatataattacactgaattatatgattttctcaaat 8022377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 9027236 - 9027191
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||    
T  9027236 gacaccgacacatataattacacggaattatgtgattatctcaaat 9027191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 9195755 - 9195800
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattttctcaaat 9195800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 14155240 - 14155285
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||    
T  14155240 gacaccaacacatgtaatcacactgtattatgtgattttctcaaat 14155285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 21924936 - 21924981
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||    
T  21924936 gacaccgacacatataattacactgaattatttgatattctcaaat 21924981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 30866149 - 30866190
Alignment:
Q  407 ccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaat 30866190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 34073348 - 34073393
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||    
T  34073348 gacaccgacccatataattacactgaattatgagattttctcaaat 34073393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 9658936 - 9658892
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaat 9658892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 11784214 - 11784262
Alignment:
Q  400 tatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||| ||||||| ||||||| | |||||||||||||||||    
T  11784214 tatgacaccgacatatataattacactgattcatgtgattttctcaaat 11784262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 13364707 - 13364751
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| || |||||||||||| ||||||||||||||    
T  13364707 acaccgacacatatgattacactgaattatatgattttctcaaat 13364751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 443
Target Start/End: Original strand, 16488567 - 16488631
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||| |||||| ||||| | | |||||||||||||||||| |||||| ||| |||||||||||    
T  16488567 acgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttct 16488631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 7248437 - 7248374
Alignment:
Q  382 tgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctca 445  Q
    |||||||||||||||| | | ||| || ||||||||||| || |||||||||||||||| ||||    
T  7248437 tgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctca 7248374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 10294182 - 10294120
Alignment:
Q  386 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||| | |||||||||||||||||| ||| |||| |||| |||| ||||||||    
T  10294182 gtgtccgacaccaacacgacaccgacacatataattacattgaaatatgcgattatctcaaat 10294120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 448
Target Start/End: Original strand, 10339090 - 10339172
Alignment:
Q  367 ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatca-cactgaattatgtgattttctcaaat 448  Q
    ||||||| ||| | |||| |||||| ||||| | | | ||| |||||||||||| | ||||||||||||||||||||||||||    
T  10339090 ccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgattttctcaaat 10339172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 448
Target Start/End: Original strand, 10888982 - 10889020
Alignment:
Q  410 acacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  10888982 acacatataatcacactaaattatgtgattttatcaaat 10889020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 31579228 - 31579271
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||  || |||||||||||||||||||||||||||    
T  31579228 gacaccgacacata--attacactgaattatgtgattttctcaaat 31579271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 7151470 - 7151425
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| ||||| |||||||||||||| ||||||    
T  7151470 gacaccaacacatataattacacttaattatgtgattttttcaaat 7151425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 8931603 - 8931648
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| ||||||||||||| | |||||||||||| ||||||||||||    
T  8931603 gacatcgacacatataattatactgaattatgttattttctcaaat 8931648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 448
Target Start/End: Original strand, 9107351 - 9107416
Alignment:
Q  383 gttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| ||||| | | ||||||||||| | |||| |||||||||| ||||||||| ||||||    
T  9107351 gttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaat 9107416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 10770675 - 10770720
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  10770675 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 10770720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 13851794 - 13851749
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| ||||||||||||| ||||||||||| || ||||||||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaat 13851749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 32320670 - 32320715
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| ||||||||| ||| |||||||||||||||| ||||||    
T  32320670 gacaccgatacatataatgacattgaattatgtgattttatcaaat 32320715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 32511667 - 32511712
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||| |||||| |||||||||||||||||||||| ||||    
T  32511667 gacaccaacacttataattacactgaattatgtgattttcttaaat 32511712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 33001290 - 33001335
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||| | |||||||||||||| ||||||    
T  33001290 gacaccgacacatataattacatttaattatgtgattttttcaaat 33001335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 34595192 - 34595147
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  34595192 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 34595147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 447
Target Start/End: Original strand, 17327656 - 17327700
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaa 447  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||    
T  17327656 gacactgacacatatagttacactaaattatgtgattttctcaaa 17327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 18367894 - 18367854
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| |||||| ||| |||||||||||    
T  18367894 gacaccgacacatataattacactgcattttgtgattttct 18367854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 26178683 - 26178727
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| || ||||| |||||||||||||| ||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaat 26178727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 32299332 - 32299288
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||    
T  32299332 acaccgacacgtataactacattgaattatgtgattttctcaaat 32299288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 448
Target Start/End: Original strand, 6630889 - 6630958
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||| ||||||| | |||| ||||||||||||| ||||||||||| |||| ||||||||||    
T  6630889 acgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaat 6630958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 22602711 - 22602756
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 448
Target Start/End: Complemental strand, 32308200 - 32308133
Alignment:
Q  381 gtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| |||||||||||| | | ||||| |||||||| ||| |||||||||||||||||||||||||||    
T  32308200 gtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaat 32308133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 448
Target Start/End: Complemental strand, 24339733 - 24339655
Alignment:
Q  370 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| |||||||||| |||||| ||||| | | ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  24339733 gtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaat 24339655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 447
Target Start/End: Complemental strand, 5835306 - 5835261
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaa 447  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||    
T  5835306 tgacaccgacacatataattacactgaattatgttattttctcaaa 5835261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 9482992 - 9482947
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattttctcaaat 9482947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 20549849 - 20549804
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  20549849 gacaccgacacatataattacactgaattacgtgattttctcaaat 20549804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 3520333 - 3520388
Alignment:
Q  393 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| ||| |||||||||||||||| ||| |||||||| ||||||||||||||    
T  3520333 acaccaacatgtcaccgacacatataattacattgaattatatgattttctcaaat 3520388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 19206118 - 19206063
Alignment:
Q  393 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| | |||||||||||||||||| | | |||||||||||||||||||||||    
T  19206118 acaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaat 19206063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 440
Target Start/End: Complemental strand, 640172 - 640134
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattt 440  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  640172 tgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 3721151 - 3721106
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||    
T  3721151 gacaccgacacatataattatactaaattatgtgattttctcaaat 3721106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 5548734 - 5548689
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||    
T  5548734 gacactgacacatataattacactgaattatttgattttctcaaat 5548689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 7328692 - 7328737
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttctcaaat 7328737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 16341554 - 16341509
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||    
T  16341554 gacaccggcacatataattacacttaattatgtgattttctcaaat 16341509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 17307951 - 17307906
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||    
T  17307951 gacaccaacacatataattacactgaattatgttattttctcaaat 17307906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 19992059 - 19992014
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||    
T  19992059 gacaccgacacttataattacactgaaatatgtgattttctcaaat 19992014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 49107878 - 49107834
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||    
T  49107878 gacaccgacacatataatcacactcaattatgtg-ttttctcaaat 49107834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 15902879 - 15902835
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaat 15902835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 17851488 - 17851444
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaat 17851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 18213034 - 18213074
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  18213034 gacaccgacacatataattacactaaattatgtgattttct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 445
Target Start/End: Complemental strand, 22868094 - 22868058
Alignment:
Q  409 gacacatataatcacactgaattatgtgattttctca 445  Q
    |||||||||||| ||||||||||||||||||||||||    
T  22868094 gacacatataattacactgaattatgtgattttctca 22868058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 448
Target Start/End: Original strand, 38134392 - 38134452
Alignment:
Q  388 gtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| | |||| |||||||||||| || ||| |||||||||| ||||||||||||    
T  38134392 gtccaacacccacatgagaccgacacatatgattacattgaattatgtcattttctcaaat 38134452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 39138502 - 39138462
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  39138502 gacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 448
Target Start/End: Original strand, 11665408 - 11665486
Alignment:
Q  370 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| ||| |||||| |||| | ||||| | |||||| |||||| |||||| | |||||||||||||||||| ||||||    
T  11665408 gtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaat 11665486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 27732243 - 27732285
Alignment:
Q  406 accgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||    
T  27732243 accgacacatataattacactgaattatgtaattttcttaaat 27732285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 29787356 - 29787415
Alignment:
Q  387 tgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | || ||||| |||||||  || |||||||||||||||||||||||||||    
T  29787356 tgtccaacaccgacattacaccaacacata--attacactgaattatgtgattttctcaaat 29787415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 445
Target Start/End: Original strand, 32287464 - 32287506
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctca 445  Q
    |||||||||||||||| |  |||||||||||||||||||||||    
T  32287464 gacaccgacacatatacttgcactgaattatgtgattttctca 32287506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 1401083 - 1401038
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| || |||||| |||||||||||||||| ||||||||||    
T  1401083 gacaccgatacttataattacactgaattatgtgagtttctcaaat 1401038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 1433512 - 1433467
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||  ||| |||||||||||||||||    
T  1433512 gacaccgacacatataattacaccaaatgatgtgattttctcaaat 1433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 21140987 - 21141028
Alignment:
Q  407 ccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||    
T  21140987 ccgacacctataatcacactgaattatatgattttcttaaat 21141028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 21880210 - 21880165
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | |||| |||||||||||||| ||||||||||||    
T  21880210 gacaccgacacttgtaattacactgaattatgtaattttctcaaat 21880165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 24146874 - 24146829
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| | | |||||||||||||||||| ||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaat 24146829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 26329387 - 26329428
Alignment:
Q  407 ccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| |||||||||| |||| |||||||||||    
T  26329387 ccgacacatataattacactgaattgtgtgtttttctcaaat 26329428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 26733362 - 26733317
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||| |||| | |||||||||||||||||| ||||||    
T  26733362 gacaccgacacatttaattagactgaattatgtgattttgtcaaat 26733317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 27945099 - 27945054
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | |||| |||||||||||||| ||||||||||||    
T  27945099 gacaccgacacttgtaattacactgaattatgtaattttctcaaat 27945054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 35297673 - 35297718
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| | | |||||||||||||||||||||||    
T  35297673 gacaccaacacatataattataatgaattatgtgattttctcaaat 35297718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 448
Target Start/End: Complemental strand, 2424659 - 2424627
Alignment:
Q  416 ataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| |||||||||||||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaat 2424627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 5233686 - 5233642
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| ||||||||||| |||||  ||||||||||||||||||||    
T  5233686 acaccaacacatataattacactagattatgtgattttctcaaat 5233642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 448
Target Start/End: Complemental strand, 12278888 - 12278848
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||| |||||||||||||| ||||||| ||||    
T  12278888 cgacacatataattacactgaattatgtcattttcttaaat 12278848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 18233604 - 18233644
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||||| |||||||||||||| ||||||||||||    
T  18233604 cgacacctataattacactgaattatgtcattttctcaaat 18233644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 21560571 - 21560523
Alignment:
Q  393 acaccaatatgacaccgacacatataatcacactgaattatgtgatttt 441  Q
    ||||| ||| ||||||||||| | |||| ||||||||||||||||||||    
T  21560571 acaccgatacgacaccgacacttgtaattacactgaattatgtgatttt 21560523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 23128663 - 23128707
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| || |||||||||||| || |||||||||||    
T  23128663 acaccgacacatatgattacactgaattatatggttttctcaaat 23128707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 23849460 - 23849504
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||| | ||||||||||||| |||||| ||||    
T  23849460 acaccgacacatataattatactgaattatgtgtttttcttaaat 23849504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 27093415 - 27093459
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| |||||||| ||||| |||||||||||||||| ||||    
T  27093415 acaccgacgcatataattacactaaattatgtgattttcttaaat 27093459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 27184886 - 27184842
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| |||||||| ||||| |||||||||||||||| ||||    
T  27184886 acaccgacgcatataattacactaaattatgtgattttcttaaat 27184842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 30731103 - 30731050
Alignment:
Q  393 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| | |||||||||||| |  || |||||||||||||||||||||||||||    
T  30731103 acaccaacacgacaccgacacaca--attacactgaattatgtgattttctcaaat 30731050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 3966593 - 3966516
Alignment:
Q  371 tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| || |||||||||| ||||  | | |||||||||||||||||| |||||||||| ||||||||||||||||    
T  3966593 tgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaat 3966516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 6471890 - 6471935
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||    
T  6471890 gacacccacacatataattacactgaattatgtgattttctcaaat 6471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 28588675 - 28588720
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||    
T  28588675 gacaccgacacctataattacactgaattatgtgattttctcaaat 28588720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 30502389 - 30502434
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  30502389 gacaccgacacatataattacactgaattaagtgattttctcaaat 30502434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 30542732 - 30542777
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  30542732 gacaccgacacatataattacactgaattaagtgattttctcaaat 30542777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 41091258 - 41091303
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  41091258 gacatcgacacatataattacactgaattatgtgattttctcaaat 41091303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 448
Target Start/End: Complemental strand, 14873577 - 14873530
Alignment:
Q  401 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  14873577 atgacaccgacacatataattacactaaattatgtgcttttctcaaat 14873530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 16203796 - 16203841
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||    
T  16203796 gacaccgacacatataattacactaaattatgagattttctcaaat 16203841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 18421846 - 18421887
Alignment:
Q  407 ccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  18421846 ccgacacatataattacactggattatgtgattttctcaaat 18421887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 411 - 448
Target Start/End: Original strand, 24273039 - 24273076
Alignment:
Q  411 cacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaat 24273076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 24389175 - 24389138
Alignment:
Q  411 cacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaat 24389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 36838601 - 36838556
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttctcaaat 36838556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 448
Target Start/End: Complemental strand, 39698671 - 39698554
Alignment:
Q  332 ctatgaagcacggacacttttcggattaaccatctc-cagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 430  Q
    ||||||||||||||||||  ||||||||  | | || | |||| |||||| ||| |||||| ||||| | | ||||| ||||| | |||| |||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  431 tatgtgattttctcaaat 448  Q
    ||||||||||| ||||||    
T  39698571 tatgtgattttttcaaat 39698554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 406 - 443
Target Start/End: Complemental strand, 39758327 - 39758290
Alignment:
Q  406 accgacacatataatcacactgaattatgtgattttct 443  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  39758327 accgacacatataattacactgaattatgtgattttct 39758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 443
Target Start/End: Complemental strand, 18592155 - 18592091
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 443  Q
    ||||||||||||| ||||| | | ||||||| |||||||||| ||| |||||||||| |||||||    
T  18592155 acgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattatgtaattttct 18592091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 443
Target Start/End: Complemental strand, 21814343 - 21814279
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||| |||||| ||||| | | |||||||||||||||||| |||||| ||| |||||||||||    
T  21814343 acgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttct 21814279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 23015995 - 23016035
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  23015995 cgacacctataattacactgaattatgtgattttctcaaat 23016035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 448
Target Start/End: Complemental strand, 11686026 - 11685952
Alignment:
Q  373 ttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| |||||| |||||| ||||| | | |||||||||||||||||| ||||| ||||||| || ||||||||||    
T  11686026 ttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaat 11685952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 12264820 - 12264875
Alignment:
Q  393 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| ||||||||  |||||||||||| ||||||||| |||| ||||||||||||    
T  12264820 acaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaat 12264875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 441
Target Start/End: Complemental strand, 2436980 - 2436942
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgatttt 441  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  2436980 gacaccgacacatataatcacaacgaattatgtgatttt 2436942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 6247680 - 6247635
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  6247680 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 6247635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 17925173 - 17925218
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||| || ||| |||||||||||||||||| ||||    
T  17925173 gacaccgacacatattattacattgaattatgtgattttcttaaat 17925218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 21191057 - 21191102
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  21191057 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 21191102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 22423813 - 22423858
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| ||||||| | | |||||||||||||||||||||||    
T  22423813 gacaccgacatatataattatattgaattatgtgattttctcaaat 22423858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 26312827 - 26312782
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| ||||||||| |||||||||||  ||||||||||||||    
T  26312827 gacaccgatacatataattacactgaattaattgattttctcaaat 26312782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 34879408 - 34879363
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| |||||||||| || |||||||||||| ||||||||||||||    
T  34879408 gacatcgacacatattattacactgaattatatgattttctcaaat 34879363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 5467984 - 5468024
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||||| |||||||||||||||||||| ||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaat 5468024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 6401556 - 6401516
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| |||||| ||| |||||||||||    
T  6401556 gacaccgacacatataattacactgtattttgtgattttct 6401516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 23012410 - 23012454
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||| ||| | |||||| ||||||||||||||    
T  23012410 acaccgacacatataattacattaaattatatgattttctcaaat 23012454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 23221040 - 23220996
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||| || ||||| |||||||||||||| ||||||    
T  23221040 acaccgacacatatgataacactaaattatgtgattttatcaaat 23220996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 32426870 - 32426910
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||| ||||| ||| ||||||||||||||||||    
T  32426870 gacaccgacacaaataattacaatgaattatgtgattttct 32426910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 42029810 - 42029770
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||| ||||||||| ||| ||||||||||||||||||    
T  42029810 gacaccgatacatataattacattgaattatgtgattttct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 904016 - 903935
Alignment:
Q  367 ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| ||| || ||| |||||||||||| ||| || || || ||||||||| |||||||||||||||||||||||||||    
T  904016 ccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaat 903935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 447
Target Start/End: Original strand, 38148689 - 38148770
Alignment:
Q  366 tccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaa 447  Q
    ||||||||  ||||||||| |||||||||||||| | |||| |||||  || ||| ||||||||||||||||||||||||||    
T  38148689 tccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaa 38148770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 5775357 - 5775404
Alignment:
Q  401 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  5775357 atgacaccgacacatataattacacttaattatgtgattttctcaaat 5775404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 30982808 - 30982924
Alignment:
Q  333 tatgaagcacggacacttttcggattaaccatctccag-tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaatt 431  Q
    ||||||||||||||||| || ||||||  | | ||| | ||| ||| |||||| |||||  ||||| | | ||||||||||| |||||| |||||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  432 atgtgattttctcaaat 448  Q
    |||||||||||||||||    
T  30982908 atgtgattttctcaaat 30982924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 447
Target Start/End: Complemental strand, 40613504 - 40613464
Alignment:
Q  407 ccgacacatataatcacactgaattatgtgattttctcaaa 447  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaa 40613464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 16189765 - 16189722
Alignment:
Q  405 caccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| ||||| |||||||||||||||||||||||||||    
T  16189765 caccgacacacataattacactgaattatgtgattttctcaaat 16189722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 18576036 - 18576083
Alignment:
Q  401 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  18576036 atgacaccaacacatataattacaccgaattatgtgattttctcaaat 18576083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 9996899 - 9996853
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||    
T  9996899 tgacaccgagacatataattatactgaattatgtgattttctcaaat 9996853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 441
Target Start/End: Original strand, 22234819 - 22234929
Alignment:
Q  332 ctatgaagcacggacacttttcggattaaccatctccag-tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 430  Q
    |||||||||||| |||||| |||||||| |  | ||| | ||| ||| |||||| |||||  ||||| | | |||||||||||||| ||| |||||||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaat 22234918  T
Q  431 tatgtgatttt 441  Q
    |||||||||||    
T  22234919 tatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 448
Target Start/End: Complemental strand, 36635375 - 36635337
Alignment:
Q  410 acacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaat 36635337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 46160954 - 46160912
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctca 445  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  46160954 gacaccgacacatataataacactgaattatgttattttctca 46160912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 8423719 - 8423764
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||    
T  8423719 gacaccgacatttataattacactgaattatgtgattttctcaaat 8423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 411 - 448
Target Start/End: Original strand, 22440609 - 22440646
Alignment:
Q  411 cacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| |||||||||||||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaat 22440646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 443
Target Start/End: Original strand, 44132624 - 44132685
Alignment:
Q  382 tgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||| | ||||||| | |||||||||||||||||| | ||||||||| ||||||||||    
T  44132624 tgttgtgttcgacaccaacacgacaccgacacatataattatactgaattacgtgattttct 44132685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 54580024 - 54580069
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||||    
T  54580024 gacaccgacacttataattacactgaattatgtgattttttcaaat 54580069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 447
Target Start/End: Original strand, 40179637 - 40179681
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaa 447  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||    
T  40179637 gacaccgacgcatataattacactgaattatgtgattttttcaaa 40179681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 446
Target Start/End: Original strand, 10499271 - 10499314
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaa 446  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||    
T  10499271 gacactgacacatataattacactaaattatgtgattttctcaa 10499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 7214522 - 7214568
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| |||||||| ||| | |||||||||||||||||||||    
T  7214522 tgacaccgacgcatataattacattaaattatgtgattttctcaaat 7214568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 30103357 - 30103402
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||| || ||||| |||||||||||||||||||||    
T  30103357 tgacaccgacacatatgattacact-aattatgtgattttctcaaat 30103402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 33950195 - 33950149
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||| || ||| | |||||||||||||||||||||    
T  33950195 tgacaccgacacatatgattacattaaattatgtgattttctcaaat 33950149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 8402742 - 8402787
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaa 447  Q
    |||||| || ||||||||| |||||||||||| |||||||||||||    
T  8402742 tgacactgagacatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 13134508 - 13134463
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| ||||||||||||| ||||| |||||||||||||||| ||||    
T  13134508 gacatcgacacatataattacactaaattatgtgattttcttaaat 13134463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 15029823 - 15029778
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| ||||||||||||||||| || ||||||    
T  15029823 gacaccaacacatataattacactgaattatgtgatattttcaaat 15029778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 15659761 - 15659806
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| |||| |||||||| |||||||||||||    
T  15659761 gacaccaacacatataattacaccgaattatgagattttctcaaat 15659806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 448
Target Start/End: Original strand, 24613678 - 24613747
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||||  ||||| | ||||||||||||| | || | ||| |||||||||||||||||||||||    
T  24613678 acgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaat 24613747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 7012123 - 7012079
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| || ||| ||||||||||||||||| ||||||||||||    
T  7012123 acaccgatacctatgatcacactgaattatgtcattttctcaaat 7012079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 448
Target Start/End: Complemental strand, 24343560 - 24343520
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||||| |||||||||||||| ||||||||||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaat 24343520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 29205501 - 29205457
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| | |||| |||||||||||||||||||| ||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaat 29205457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 35723375 - 35723431
Alignment:
Q  393 acaccaatatgacaccgacacatataatcacactgaattatgtg-attttctcaaat 448  Q
    ||||| ||| ||||| |||||||||||| ||| ||||||||||| ||||||||||||    
T  35723375 acaccgatacgacactgacacatataattacattgaattatgtgtattttctcaaat 35723431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 9738 - 9793
Alignment:
Q  393 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||    
T  9738 acaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaat 9793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 441
Target Start/End: Complemental strand, 241724 - 241614
Alignment:
Q  332 ctatgaagcacggacacttttcggattaaccatctccag-tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 430  Q
    ||||||||||||||||||| ||||||||  | | ||| | ||| ||| |||||| |||||| ||||||| | |||||||||||  ||||| ||||| |||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaat 241625  T
Q  431 tatgtgatttt 441  Q
    |||||||||||    
T  241624 tatgtgatttt 241614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 135313 - 135358
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttctcaaat 135358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 7928508 - 7928463
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||    
T  7928508 gacaccgacacatataattacactgaattatgtgattttttcaaat 7928463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 8789551 - 8789596
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  8789551 gacaccgacacatataattacacggaattatgtgattttctcaaat 8789596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 25093560 - 25093515
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||    
T  25093560 gacaccgacacatataattacactgaattgtgtgattttctcaaat 25093515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 448
Target Start/End: Complemental strand, 11658868 - 11658828
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaat 11658828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 448
Target Start/End: Original strand, 15796262 - 15796340
Alignment:
Q  370 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| ||||||||||||| ||||| | | ||||||||||  | |||| |||||||||||| ||||||| ||||||    
T  15796262 gtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaat 15796340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 20691378 - 20691332
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||| || |||||||||||||| ||||||||||||    
T  20691378 tgacaccgacacatatgattacactgaattatgtcattttctcaaat 20691332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 441
Target Start/End: Original strand, 40993336 - 40993374
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgatttt 441  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  40993336 gacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 8039836 - 8039881
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||    
T  8039836 gacaccgacacatataattacactgaattatataattttctcaaat 8039881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 8383315 - 8383270
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||    
T  8383315 gacaccgacacttataattacactgaattatatgattttctcaaat 8383270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 448
Target Start/End: Complemental strand, 11666026 - 11665957
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||| |||| ||| | |||||||||||||||||| ||||| |||| ||||||||| ||||||    
T  11666026 acgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaat 11665957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 49505155 - 49505200
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||||    
T  49505155 gacactgacacatataattacactaaattatgtgattttctcaaat 49505200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 35222996 - 35222956
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  35222996 gacaccgacacatataattacattgaattatgtgattttct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 445
Target Start/End: Original strand, 10690266 - 10690305
Alignment:
Q  406 accgacacatataatcacactgaattatgtgattttctca 445  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  10690266 accgacaaatataattacactgaattatgtgattttctca 10690305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 11252035 - 11251991
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||  || |||||||||||||||||||||||||||    
T  11252035 tgacaccgacacata--attacactgaattatgtgattttctcaaat 11251991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 448
Target Start/End: Original strand, 32804547 - 32804586
Alignment:
Q  409 gacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaat 32804586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 448
Target Start/End: Original strand, 4987259 - 4987337
Alignment:
Q  370 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||| ||| |||||| |||||||||||| | | | |||| |||| | |||| |||||||||||||||||||| ||||||    
T  4987259 gtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaat 4987337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 448
Target Start/End: Original strand, 11313808 - 11313846
Alignment:
Q  410 acacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaat 11313846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 13807228 - 13807182
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||| || | | |||||||||||||||||||||||    
T  13807228 tgacaccgacacatattattatattgaattatgtgattttctcaaat 13807182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 448
Target Start/End: Original strand, 15812800 - 15812867
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||||| ||||||| | ||||||| ||  |||||| ||||||| |||||||||||||||||||    
T  15812800 acgtgtcgtgtccgacaccaacacgacaccggca--tataattacactgagttatgtgattttctcaaat 15812867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 448
Target Start/End: Original strand, 16192758 - 16192796
Alignment:
Q  410 acacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  16192758 acacatataattacactgaattatgttattttctcaaat 16192796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 441
Target Start/End: Complemental strand, 38731276 - 38731238
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgatttt 441  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  38731276 gacaccgacacatataactacactgaattatgtgatttt 38731238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 6780420 - 6780465
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| |||||||| || |||||||||||||||    
T  6780420 gacaccaacacatataattacactgaactacgtgattttctcaaat 6780465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 7614416 - 7614461
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||| ||||||| | |||||||||||||||||||| ||||    
T  7614416 gacaccgacatatataattatactgaattatgtgattttcttaaat 7614461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 15314877 - 15314922
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| ||||||||||| ||||| |||||||||||||| ||||||    
T  15314877 gacaccaacacatataattacactaaattatgtgattttttcaaat 15314922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 448
Target Start/End: Original strand, 17005596 - 17005665
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||| ||||  ||||||| |  |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  17005596 acgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaat 17005665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 25948888 - 25948933
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||| |||||| |||||||||||||||||||| ||||||    
T  25948888 gacaccaacacttataattacactgaattatgtgattttttcaaat 25948933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 28918059 - 28918014
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  28918059 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 28918014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 34910391 - 34910330
Alignment:
Q  387 tgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| ||||| ||| ||||||||| | | |||| |||||||||||||||||||| ||||||    
T  34910391 tgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaat 34910330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 448
Target Start/End: Original strand, 41961579 - 41961696
Alignment:
Q  332 ctatgaagcacggacacttttcggattaaccatct-ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 430  Q
    ||||||||||||||||||| ||||||||  | | | ||||||| ||| |||||| |||||| | ||| | | ||||||||||| | |||| |||| ||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaat 41961678  T
Q  431 tatgtgattttctcaaat 448  Q
     ||||||| || ||||||    
T  41961679 aatgtgatattttcaaat 41961696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 45451611 - 45451566
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||| || | |||||| ||||||||||||||||||    
T  45451611 gacaccgacacatattattatactgaagtatgtgattttctcaaat 45451566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 48202269 - 48202314
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaa 447  Q
    |||||| |||||||||||| ||| | ||||||||||||||||||||    
T  48202269 tgacacagacacatataattacattaaattatgtgattttctcaaa 48202314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 1438853 - 1438817
Alignment:
Q  412 acatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| | |||||||||||||||||||||||||    
T  1438853 acatataattatactgaattatgtgattttctcaaat 1438817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 2941616 - 2941576
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| |||||| ||| |||||||||||    
T  2941616 gacaccgacacatataattacactgtattttgtgattttct 2941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 3962795 - 3962839
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||| ||||||| |||||| ||||||| ||||    
T  3962795 acaccgacacatataataacactgagttatgttattttcttaaat 3962839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 11493372 - 11493404
Alignment:
Q  413 catataatcacactgaattatgtgattttctca 445  Q
    |||||||| ||||||||||||||||||||||||    
T  11493372 catataattacactgaattatgtgattttctca 11493404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 442
Target Start/End: Original strand, 11507479 - 11507515
Alignment:
Q  406 accgacacatataatcacactgaattatgtgattttc 442  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  11507479 accgaaacatataattacactgaattatgtgattttc 11507515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 12704056 - 12704020
Alignment:
Q  412 acatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaat 12704020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 13414527 - 13414487
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| ||| |||||||| |||||||||    
T  13414527 gacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 13845526 - 13845566
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| |||||| ||| |||||||||||    
T  13845526 gacaccgacacatataattacactgcattttgtgattttct 13845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 14028065 - 14028025
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||||||||||||||| |||||| ||| |||||||||||    
T  14028065 gacaccgacacatataattacactgcattttgtgattttct 14028025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 448
Target Start/End: Complemental strand, 29508497 - 29508457
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaat 29508457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 34307786 - 34307826
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||| |||||| |||||||| ||||||||||||||||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaat 34307826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 448
Target Start/End: Complemental strand, 39002101 - 39002045
Alignment:
Q  392 aacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||| | ||||| |||| ||||||| ||| |||||||||||||||| ||||||    
T  39002101 aacaccaacacgacactgacatatataattacattgaattatgtgattttttcaaat 39002045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 53236 - 53193
Alignment:
Q  405 caccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaat 53193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 443
Target Start/End: Original strand, 5973 - 6037
Alignment:
Q  379 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 443  Q
    |||||| |||| | ||||| ||| |||||||||||||||||| |||||| ||| |||||||||||    
T  5973 acgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcattttgtgattttct 6037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 1114 - 1048
Alignment:
Q  382 tgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    |||||||||||||||| | |  |||| |||||||||| | |||||||||||||| ||||| ||||||    
T  1114 tgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaat 1048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 17845 - 17903
Alignment:
Q  367 ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacac 425  Q
    ||||||| ||| |||||| |||||||||||| ||| ||||||| |||||||||| ||||    
T  17845 ccagtgtcggacacgtgtcgtgtccaacaccgatacgacaccgtcacatataattacac 17903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 441
Target Start/End: Complemental strand, 23478 - 23440
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgatttt 441  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  23478 gacaccgacacttataattacactgaattatgtgatttt 23440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 90902 - 90856
Alignment:
Q  402 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| ||||| ||||||| |||||||||||| ||||||||||||||    
T  90902 tgacatcgacatatataattacactgaattatatgattttctcaaat 90856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 16225 - 16180
Alignment:
Q  370 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacat 415  Q
    ||||||||||||| |||||||| ||||||| | |||||||||||||    
T  16225 gtgttggatacgtattgtgtccgacaccaacacgacaccgacacat 16180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 444
Target Start/End: Original strand, 25769 - 25810
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctc 444  Q
    ||||||||||| |||||| ||||| |||||||||||||||||    
T  25769 gacaccgacacttataattacactaaattatgtgattttctc 25810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 70336 - 70291
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||| |||||| |||||||||||||| ||||| ||||||    
T  70336 gacaccgacacttataattacactgaattatgttattttttcaaat 70291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 263373 - 263418
Alignment:
Q  403 gacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| ||||| |||||| ||||||||||||||| |||||||||||    
T  263373 gacactgacacttataattacactgaattatgtggttttctcaaat 263418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 448
Target Start/End: Complemental strand, 6393 - 6325
Alignment:
Q  380 cgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||| ||| || ||||| ||| |||||||||||||||||| ||| |||||||||  ||||| ||||||    
T  6393 cgtgtcgtgccccacaccgatacgacaccgacacatataattacattgaattatgcaattttgtcaaat 6325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 3828 - 3888
Alignment:
Q  381 gtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgatttt 441  Q
    |||| |||||| ||||||| | ||||| ||||| | |||| ||||||||||||||||||||    
T  3828 gtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttt 3888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 28907 - 28863
Alignment:
Q  404 acaccgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||||||| ||| ||||||||| |||||||| ||||    
T  28907 acaccgacacatataattacattgaattatgcgattttcttaaat 28863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 448
Target Start/End: Complemental strand, 26446 - 26406
Alignment:
Q  408 cgacacatataatcacactgaattatgtgattttctcaaat 448  Q
    ||||||||||||  ||| |||||||||||||||||||||||    
T  26446 cgacacatataacgacattgaattatgtgattttctcaaat 26406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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